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ClCG03G001410 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATACAATTATATTGTGGGTATGTCATGTGCAACAAACATTCTTTGAGGCAAAACATGTGCATTGAGAAGAGTTTTATACCATCTAATGCCCACTTTCATACAACTACCTTTTTTCCACCTCAAATGTGTTGTCATTGTGACTCAATAAACTAAGATATTGGTGTAAGAATTCCAACCAATCCTATTTCTGAAATTTTGTTTCATGAGCTAAACTTTCTTTTGGTAATTATTTTGCTTATTTTTTAAATTTTAATTTCTAAATAACTATTTTTTTTTTTTTTTAATTAAAAGTTTCTTTGAGAAATGATTTCAAATTCAAACTATAAATTAAAAAACATAGGTTTTAAAACTTGTTATTGTTTTTAGAATTAGACTCAAAATAAGACAATAAAGTCAATTTTAAGAAATCAAATGGTTATTGATTGGAGCCTAAACATTTTTTTTTTAATTAATACACCTTTCACCCAAACTACCATCATGGGTTGTGAGCATTATGGTTCACAAAATTATTCTCAATTTTTTTTTTATATGGTATTAGTGCTTAGGATCTCCTCCTTCTTGGAATAATAGAGATTTGAACCTTCCACCTCAAAAAAAGTAATACATGTCAATTACTATTAAGCTATGCTCACTTTGGTTATAAGATAATCATTTTGATAGCTCAACGCTTATATAATAATTAATATACAAAATGGATACTTGAAGAATAAGAAAAAAATAATTATCAATATTAAATTCTTATAAATAAAATTTAAATATTACTTTGGTCTATGTACTTTTGGTTTTTGTCCATTATGGTCTCTTTACTTTCAAAATGTTCATTTTGGTCCCTATACTTTCAAAACGTTCATTTTGGTCATTGTACTTTAAAAAAGTGACCAATTTGGTTCATTCATTTGTGTTTTTACTTCATTTTTAAAATGATCACTCATTCAAAATTCAAGACCCAAATGAGCTAAAATTGAAAGGATAATGACCAAAATTAACATTTTGAAAACACAGGAACTAAAATAATAAAATTTAAAAGTATTTGGACCAAAATGAACAAAAATAAAAAATACAGAAATTAAAGTAGTATTTAAATATTATGAATAGGTAATTAATTAAAAAAGTTTTAAGATTTCTTAGTAAATTACAAATAACAACAATTAACAATTAATAGAAATCTTAAAAAAAAAAAAAACAATTAATAGGCAAACTAATAACCATTAAAAAAAATAATTTTGAGAGAGTTTTGATAGGAAATTGAGACAACTGAAATTGAAGTGGGAAGAAAGTGAGAATTGAGATTTTTTTTTTTCTTTAATACTGCAAAATTTAAAACTTACCATAAATACTTGTAGGTTGTAGATCAAGTTTACTCTCATATTTAGTGCAGGTTTAGAATTGATTTTTCTTTTTTAGAAAAATTTCTAGAATTGATTTTTTTTAAAGAAAAATTTTTAAAATTGATTTTGAAATTGTTAAAATCGCTTTTGTTATGTTTAAAATCACTTCAAATTTTGTTTAAACCCTTCAAATATATATTAGTTTAAACCAAATCTTAAAAACTCAAAGACTAAAATGACTAAGTTGAAACATTAAGGACCAAATGCACCTATTATAGAAAACTTAGGGACTAAAAGTTATTTTTTCCTTAAATTTAAAACTTAGAATCAAGTGACTAATCAAATTATCCAATAACTTTTTTTAAATAAGAAAAAATTAGAAAAATTATTATAAACAAAATAGTTTATAATATAGTTTATAATAGTTTTACTCGTTTATTATATTTAAAAAAATTATCACAATAATTTATAATTAAATACCGACTTACTATCAAACTAGTAGATGAAAAAATCAATATATATAATAAAAAAAAGAGAAATAAAAGGGCGAGAATGGGGATATTGACGAGGTGTCGAAATAATGGTCGACATGTCGATATAGAGAATAAACAAAGGCTGGCGGCGGCCATGCGATCGAAGCAGCAAAAAGTTCTTCAGGTTTTAGAGATTGATTTTGCTGACCAATAGTTTCCATTAAAAAAAACTACAATTTCCCATTTCAGATTGGAATCGGATTCATCAAAATTTTGGAAACTTAAAATGGAGAGAGATCTGCAGAAAGCCGTCTCCTGAATTTGTTTATTCGATTCCCTCAATCTCATGCCGTTCTTGTTTCTCCAAAACCCTAGTAGGCGGTAGCATTTCTCATCTTCCCTCTGCATATTCTCTACTGGGTATCTCCAATCTTCCCCAAAATTTTTGATTTCACAGTCGGCATGAAGGACGGGAAATCGATCAAGCTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCGCCGTTCAAATTGGCTAAATTGTTCGATCCGGAGACTTCATGGGATAAGGTTTTCTATAAACTTAGCAGCTTTCTTCTGAATTCTATACTTCACTTTAAGCCCCATGGAAATCCTAATAATTTTCTCTGTTTTGTGGGGCTTTCAAATTGAAGTCTTTATTGCTTCAAGCTCTTGCTTCTTCCGGTGTTGTGAATTTTAACTAATGAAATCTGTGCTTTACCAATCAAGTTTAATGAATTGAGATAGCTTACCATTATCTAGCGTGTACCGTTATGAAGATTGAGTTTCCTGGTTTGCCAAATTTAATATTGAATGTCATTTGTCGGGATGAGCTTAGTTGTAATTGACATGTACTCCTTCTCTTAAAGTCAGCAATTTGATTACTGAATATCATTCTCTTGATAAATGGAAGTGGAAAGAAACCAACACGAGCATAGAACAGACATGTAGTATGTGTTAGTGACTAAGAGGTTTTGCTATTGAATTTCATCCTCTATTGTACTTAAAAGATAATGGAAGGGGAAAGGAAAGCCATGGATGAGAAGGTTTATGATACTTGGTATCTGAAATGAATTAAGTGGAATTATTTTTGTTATTAAAGCTGTGCTTTGGCCTTTGGCTTGAATATTTTCTACAACACAGTTTTGTTCTGTTCAAAATGCAGGATCAACTAGGAGATGTCTTGCATTGGATGAGACAAGCAGTTGCTCTTGTATGTGGGCTACTTTGGGGTTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTGTAAGTTGCCATTTTTATACTTTTGTTACGCATTATGTGTTTAGAATCTCTCATCTCTTTTAGTGGGCACAGTGTTTCTGAATGAAGCTTTCCCCTACTATCACTTCTGAAAGCATACTAATAATTAATCACTCTAAGCACTGTGAAATGTTTTTAAGTGCTTTAAAACCAAACATTATGAAAATTTTGAAAATGTTTCTAAAAGTACTCCCGAACCACGTTTAATCTTCTGGAATTGGATTGGTGTATGAGTGGTTTTTTACTTCTACTTTCATTAGCAATTCACACGGATTTTCCTCATCTTGATCTTTTTCATTAAGTCAGTCAGTACTTTAAAATGGATCCTAGTCCAATCCATAAATGCATTGCTCCTTGCCTTCCTCTTAAGAGAGAAGATTCAACAAATTGTCTTGTAGTACTATCATTTGAATTAGCATATTTACATACTCATTATGCATGTTACTAAAATGTGTGATGAAATTCCATCATTCAGACATTTGGGTTTAGACAGCTCTGGACAATGGAGTCATTCCTCTATGCATTTTTTGAGTTCTCTATTAAACATTTGTTTTCTTGCACTTGGGAAAACTTTAGTTGATTTTGTGAATTTGGTCTCATTTTCAGATTCTTGGTGATATCAACCACTATGGTATATGGATATTATGCAATGATATTGAAGGTAGACGAAGAAGAATTCGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCATAACTCTGTTTCTGGTAATCTAATGGCATCCTTTAACTCTCCCTCTCTGTCTTCTGTTAAATTATAATCTGCATCTTCCTCTTGTGACAATTGCAATTGCTGAGTCTTTTGTTAGTTCAAGTGCTTATTTTCCTTTCTTCTTTGCTGTTCAGCTTATGTGGACCCTCGTTTATAGTTTGGGACATTTCTGATAACGGTTTTGTCATCGTTCTCGAGATCATTGGAGGGAGAGGTTGGTCGCCATAAGTTGCTTGCTTTTTTATTAGTGATTGTGCAGTAGCATGCTGTAATTTAGAAGTGGATTAATTTCATTAGGATTACAACTAACCAAATTTTAGTTGTTATTATTATTGACTCTGTTAAATCCAATTCAAACTTAAAATAATAAAATCTTCAAAGGAGCGGAGTTTTTTCTGTCGATCTATGCATAGCTCAACTGGTTAAGACATGTGTCATCGACCAAAAAAATCGAAAGTTGGAGTGTCAACCTTAT ATGAATACAATTATATTGTGGGCTGGCGGCGGCCATGCGATCGAAGCAGCAAAAAGTTCTTCAGATTGGAATCGGATTCATCAAAATTTTGGAAACTTAAAATGGAGAGAGATCTGCAGAAAGCCGTCTCCTGAATTTGTTTATTCGATTCCCTCAATCTCATGCCGTTCTTGTTTCTCCAAAACCCTAGTAGGCGTCGGCATGAAGGACGGGAAATCGATCAAGCTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCGCCGTTCAAATTGGCTAAATTGTTCGATCCGGAGACTTCATGGGATAAGGTTTTCTATAAACTTAGCAGCTTTCTTCTGAATTCTATACTTCACTTTAAGCCCCATGGAAATCCTAATAATTTTCTCTGTTTTGTGGGGCTTTCAAATTGAAGTCTTTATTGCTTCAAGCTCTTGCTTCTTCCGGTGTTGTGAATTTTAACTAATGAAATCTGTGCTTTACCAATCAAGTTTAATGAATTGAGATAGCTTACCATTATCTAGCGTGTACCGTTATGAAGATTGAGTTTCCTGGTTTGCCAAATTTAATATTGAATGTCATTTGTCGGGATGAGCTTAGTTGTAATTGACATGTACTCCTTCTCTTAAAGTCAGCAATTTGATTACTGAATATCATTCTCTTGATAAATGGAAGTGGAAAGAAACCAACACGAGCATAGAACAGACATGTAGTATGTGTTAGTGACTAAGAGGTTTTGCTATTGAATTTCATCCTCTATTGTACTTAAAAGATAATGGAAGGGGAAAGGAAAGCCATGGATGAGAAGGTTTATGATACTTGGTATCTGAAATGAATTAAGTGGAATTATTTTTGTTATTAAAGCTGTGCTTTGGCCTTTGGCTTGAATATTTTCTACAACACAGTTTTGTTCTGTTCAAAATGCAGGATCAACTAGGAGATGTCTTGCATTGGATGAGACAAGCAGTTGCTCTTGTATGTGGGCTACTTTGGGGTTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTATTCTTGGTGATATCAACCACTATGGTATATGGATATTATGCAATGATATTGAAGGTAGACGAAGAAGAATTCGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCATAACTCTGTTTCTGCTTATGTGGACCCTCGTTTATAGTTTGGGACATTTCTGATAACGGTTTTGTCATCGTTCTCGAGATCATTGGAGGGAGAGGTTGGTCGCCATAAGTTGCTTGCTTTTTTATTAGTGATTGTGCAGTAGCATGCTGTAATTTAGAAGTGGATTAATTTCATTAGGATTACAACTAACCAAATTTTAGTTGTTATTATTATTGACTCTGTTAAATCCAATTCAAACTTAAAATAATAAAATCTTCAAAGGAGCGGAGTTTTTTCTGTCGATCTATGCATAGCTCAACTGGTTAAGACATGTGTCATCGACCAAAAAAATCGAAAGTTGGAGTGTCAACCTTAT ATGAATACAATTATATTGTGGGCTGGCGGCGGCCATGCGATCGAAGCAGCAAAAAGTTCTTCAGATTGGAATCGGATTCATCAAAATTTTGGAAACTTAAAATGGAGAGAGATCTGCAGAAAGCCGTCTCCTGAATTTGTTTATTCGATTCCCTCAATCTCATGCCGTTCTTGTTTCTCCAAAACCCTAGTAGGCGTCGGCATGAAGGACGGGAAATCGATCAAGCTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCGCCGTTCAAATTGGCTAAATTGTTCGATCCGGAGACTTCATGGGATAAGGTTTTCTATAAACTTAGCAGCTTTCTTCTGAATTCTATACTTCACTTTAAGCCCCATGGAAATCCTAATAATTTTCTCTGTTTTGTGGGGCTTTCAAATTGA MNTIILWAGGGHAIEAAKSSSDWNRIHQNFGNLKWREICRKPSPEFVYSIPSISCRSCFSKTLVGVGMKDGKSIKLNSQLQHQNGHLPPFKLAKLFDPETSWDKVFYKLSSFLLNSILHFKPHGNPNNFLCFVGLSN Homology
BLAST of ClCG03G001410 vs. NCBI nr
Match: XP_038895585.1 (respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 80.1 bits (196), Expect = 1.6e-11 Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0
BLAST of ClCG03G001410 vs. NCBI nr
Match: XP_038895583.1 (respirasome Complex Assembly Factor 1-like isoform X1 [Benincasa hispida] >XP_038895584.1 respirasome Complex Assembly Factor 1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 80.1 bits (196), Expect = 1.6e-11 Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0
BLAST of ClCG03G001410 vs. NCBI nr
Match: KAA0067751.1 (Rab5-interacting [Cucumis melo var. makuwa] >TYJ97393.1 Rab5-interacting [Cucumis melo var. makuwa]) HSP 1 Score: 78.6 bits (192), Expect = 4.8e-11 Identity = 33/37 (89.19%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of ClCG03G001410 vs. NCBI nr
Match: XP_008457469.1 (PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]) HSP 1 Score: 78.6 bits (192), Expect = 4.8e-11 Identity = 33/37 (89.19%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of ClCG03G001410 vs. NCBI nr
Match: XP_022998338.1 (uncharacterized protein C20orf24 homolog [Cucurbita maxima]) HSP 1 Score: 78.2 bits (191), Expect = 6.2e-11 Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 0
BLAST of ClCG03G001410 vs. ExPASy TrEMBL
Match: A0A5A7VQ84 (Rab5-interacting OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002120 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 2.3e-11 Identity = 33/37 (89.19%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of ClCG03G001410 vs. ExPASy TrEMBL
Match: A0A1S3C692 (uncharacterized protein C20orf24 homolog OS=Cucumis melo OX=3656 GN=LOC103497150 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 2.3e-11 Identity = 33/37 (89.19%), Postives = 37/37 (100.00%), Query Frame = 0
BLAST of ClCG03G001410 vs. ExPASy TrEMBL
Match: A0A6J1KGG2 (uncharacterized protein C20orf24 homolog OS=Cucurbita maxima OX=3661 GN=LOC111493006 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 3.0e-11 Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 0
BLAST of ClCG03G001410 vs. ExPASy TrEMBL
Match: A0A6J1G9S8 (uncharacterized protein C20orf24 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452238 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 3.0e-11 Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 0
BLAST of ClCG03G001410 vs. ExPASy TrEMBL
Match: A0A0A0LY22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523070 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 9.7e-10 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0
BLAST of ClCG03G001410 vs. TAIR 10
Match: AT5G59410.1 (Rab5-interacting family protein ) HSP 1 Score: 54.3 bits (129), Expect = 9.0e-08 Identity = 26/40 (65.00%), Postives = 28/40 (70.00%), Query Frame = 0
BLAST of ClCG03G001410 vs. TAIR 10
Match: AT2G29020.1 (Rab5-interacting family protein ) HSP 1 Score: 48.1 bits (113), Expect = 6.4e-06 Identity = 24/43 (55.81%), Postives = 27/43 (62.79%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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