ClCG03G000330 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG03G000330
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	CCT domain-containing protein
Location	CG_Chr03: 358865 .. 361101 (+)
RNA-Seq Expression	ClCG03G000330
Synteny	ClCG03G000330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAATGGGTTTTAGTTGGTTAGTGAAGAGCCCAAAGAAAGAAGATGAACAAGAAGTTCCTAATTCCATTTGGGAGGACGATTTTAAAGCTTTTTTTGAGGTCAGGGATGAAGATAACCCACCGCCGGTGCAGCAGCCAGATTATCATTTCCACCACCACGGCCAGGGCGGCGTTATGGAAAACAAGAATAACAAGGTTTGTTTGAACTTAAATCTTAACTATGAAGAGGTTTTGGAAGCATGGTCCGGCCGTGGTTCTCTTTGGGCAGCCGCGTCTTGTGTTAATTCCAACGACCCAACTCAGGACTCCTATGTAAGTTATTTCCTAATTATTAACATCAGTTTGATAGCTATATTTAAAATTAGTTTGTGTAATAATGTTGTTAAGTAGATGGGAGAGGTTCCAAGAATGGAGGAAGAAAGAACAAGAAGGGTGCTGAGGTACAAGGAAAAGCGTCACACCAGATTATTCTCCAAGAAGATAAGATACCAAGTTCGTAAGCTCAATGCAGAGAAAAGGCCTAGAATAAAGGTGAATAATAAATATATCAACCCTTTCATTTAAACAATACCTACAGTTTTATTTATTTATTATTTTTTTAATCTTTGTTTGATACCCGTTTTAACTTGGGTAATTGATTTAAATGATAAAATTGATTGAAATATTTTTAAATATAACAAAATGTCACCGTTTATTCGTGATAGACAACGATAGACAGTAATAAAATACTATTATCATCTATCACTATCCATCCGTCTATCCATTGTATGTCTATTACTAATAGACAATAACATTTTGTTGTATTTCTAAATAAATTGTGTTATTTTTTTATGTTTAAAAACACAACTATTTTATATTTATTATTTTTTTTTTTAAGTTTTTTAATTTTAGCTCGGTTGTTGAAGATATTTTTAAAAAGTAGATGATAAAAGAGAAAACATGTAGCTATATAAACTTGATTTTCAATATATATATTATTTTACAACAATTTTTTTTTTTAGTTTTTAGTTTTTGAAATTTATGTTTCCTTTCTCATCAATTCTATACTATGATTTTCACATGTTCTTTCAAAAAACAAAAAATCACTTGAATTCTTAGTCAAATTATAAAAATAAAAATTACTTTTTTTAAATTAATTTTTTAGTTTTCAAAACTTGACTTAATTTTTTGAAAACCTAGGTCAAAAGTGTATTAAAAAAAACTTACATGGGGGAGTTGTGTTTTATAAAATTAATTTTCAAAAACTAAAAAACCTAAACCAAGACCCCTTTTGATAATCATTTTGTTCTTAATTTCCACACAATTATTTGATAAGTTTTTCAACGTCTTAATTTTTAAAAATTCTAAATAAGCAAAATTCCAAAAATAAAATCTAAGTTTTCTCAAAAGTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTCAAAATTTTACTTAGATTTTGAAATCACACTTAAAAAATTCAAATAGGGTAAAGAAGTAAGAAAAGTATAAAAAAATTGTGAATAATAAGCTTAATTATTGCAAATAAAGTAGGTACAAAACGAAGTGTAAATAGTTATCCAACAAAGTATAATTAAAAACGAAACGATTATCAACGGGATTAGTTTGAAGTTTGGAGGTGAAGAAGGTGTTTTTGTGTTTGACAGGGGCGTTTTGTGAAGACTGTTGAATGAAAGGAGTCTCCAACTTTTCCTTTTTCTCTTTGTGGATATATTTTCTTCATTCTCTTCTTCATGAAAATATCTAAAATTTTATGCACTTTTTATTTTTTTTTCACATTTGTGATACTCAGAACTTTTTGTGTGGGTTTCATTATGGTGGGTGTGGGCTCTCCCATAAACCCCAACTTGCCATTAAAGATTACACTCTGAATTGACCATATATAGTTTATGTCCCATTTGCACATCACTCCCTCAAGAAAGTATAAATGACAACAATAGGACTTCCCAGCCATCACCTTTAAACCCTTTCTGGGTCGGGTTTGAATTTTTTAGTCTCCGAGTTTTAAAGAATGTGAAAATTATAATTATAGTATAGAATTGACGAAATTTAAAAAAAAAATGAGAACGTCCCTCCCTAAATCTCCATATCTTTGAGGACCCAAAAATTAAAAGCATATGATAATTGTGAACATTTTATTGCCCCTGAATCTCATCAATGTGAACAAAAATCATTATAGCTCTTCACTTCTGGCAATTTTTGTAGGACCCACCAAAAGTTGGAATACCAAAATGA

mRNA sequence

GAGAAATGGGTTTTAGTTGGTTAGTGAAGAGCCCAAAGAAAGAAGATGAACAAGAAGTTCCTAATTCCATTTGGGAGGACGATTTTAAAGCTTTTTTTGAGGTCAGGGATGAAGATAACCCACCGCCGGTGCAGCAGCCAGATTATCATTTCCACCACCACGGCCAGGGCGGCGTTATGGAAAACAAGAATAACAAGGTTTGTTTGAACTTAAATCTTAACTATGAAGAGGTTTTGGAAGCATGGTCCGGCCGTGGTTCTCTTTGGGCAGCCGCGTCTTGTGTTAATTCCAACGACCCAACTCAGGACTCCTATATGGGAGAGGTTCCAAGAATGGAGGAAGAAAGAACAAGAAGGGTGCTGAGGTACAAGGAAAAGCGTCACACCAGATTATTCTCCAAGAAGATAAGATACCAAGTTCGTAAGCTCAATGCAGAGAAAAGGCCTAGAATAAAGGACCCACCAAAAGTTGGAATACCAAAATGA

Coding sequence (CDS)

ATGGGTTTTAGTTGGTTAGTGAAGAGCCCAAAGAAAGAAGATGAACAAGAAGTTCCTAATTCCATTTGGGAGGACGATTTTAAAGCTTTTTTTGAGGTCAGGGATGAAGATAACCCACCGCCGGTGCAGCAGCCAGATTATCATTTCCACCACCACGGCCAGGGCGGCGTTATGGAAAACAAGAATAACAAGGTTTGTTTGAACTTAAATCTTAACTATGAAGAGGTTTTGGAAGCATGGTCCGGCCGTGGTTCTCTTTGGGCAGCCGCGTCTTGTGTTAATTCCAACGACCCAACTCAGGACTCCTATATGGGAGAGGTTCCAAGAATGGAGGAAGAAAGAACAAGAAGGGTGCTGAGGTACAAGGAAAAGCGTCACACCAGATTATTCTCCAAGAAGATAAGATACCAAGTTCGTAAGCTCAATGCAGAGAAAAGGCCTAGAATAAAGGACCCACCAAAAGTTGGAATACCAAAATGA

Protein sequence

MGFSWLVKSPKKEDEQEVPNSIWEDDFKAFFEVRDEDNPPPVQQPDYHFHHHGQGGVMENKNNKVCLNLNLNYEEVLEAWSGRGSLWAAASCVNSNDPTQDSYMGEVPRMEEERTRRVLRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIKDPPKVGIPK

Homology

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BLAST of ClCG03G000330 vs. NCBI nr
Match: XP_038893945.1 (zinc finger protein CONSTANS-LIKE 7 isoform X2 [Benincasa hispida])

HSP 1 Score: 246.1 bits (627), Expect = 2.0e-61
Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 0


Query: 1   MGFSWLVKSPKKEDEQEVPNSIWEDDFKAFFEVRDEDNP--PPVQQPDYHFHHHGQGGVM 60
           MGFSWLVKSPKKEDEQ+VPNSIWEDDFKAFFE+ DE+NP  PP+QQPDYHFH    G  M
Sbjct: 6   MGFSWLVKSPKKEDEQQVPNSIWEDDFKAFFELTDEENPPRPPLQQPDYHFH---DGAFM 65

Query: 61  ENKNNKVCLNLNLNYEEVLEAWSGRGSLWAAASCVNSNDPTQDSYMGEVPRMEEERTRRV 120
           ENK NK+ LNLNLNYEEVLEAWS RGSLWAAA+   ++D T D YMGEVPRMEEERTRRV
Sbjct: 66  ENK-NKISLNLNLNYEEVLEAWSDRGSLWAAAASSLTDDATHDPYMGEVPRMEEERTRRV 125

Query: 121 LRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIKD 152
           LRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIK+
Sbjct: 126 LRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIKN 154

[Close]

BLAST of ClCG03G000330 vs. NCBI nr
Match: XP_038893946.1 (zinc finger protein CONSTANS-LIKE 7 isoform X3 [Benincasa hispida])

HSP 1 Score: 245.4 bits (625), Expect = 3.4e-61
Identity = 126/152 (82.89%), Postives = 134/152 (88.16%), Query Frame = 0


Query: 1   MGFSWLVKSPKKEDEQEVPNSIWEDDFKAFFEVRDEDNP--PPVQQPDYHFHHHGQGGVM 60
           MGFSWLVKSPKKEDEQ+VPNSIWEDDFKAFFE+ DE+NP  PP+QQPDYHFH    G  M
Sbjct: 6   MGFSWLVKSPKKEDEQQVPNSIWEDDFKAFFELTDEENPPRPPLQQPDYHFH---DGAFM 65

Query: 61  ENKNNKVCLNLNLNYEEVLEAWSGRGSLWAAASCVNSNDPTQDSYMGEVPRMEEERTRRV 120
           ENK NK+ LNLNLNYEEVLEAWS RGSLWAAA+   ++D T D YMGEVPRMEEERTRRV
Sbjct: 66  ENK-NKISLNLNLNYEEVLEAWSDRGSLWAAAASSLTDDATHDPYMGEVPRMEEERTRRV 125

Query: 121 LRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIK 151
           LRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIK
Sbjct: 126 LRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIK 153

[Close]

BLAST of ClCG03G000330 vs. NCBI nr
Match: XP_038893944.1 (zinc finger protein CONSTANS-LIKE 16 isoform X1 [Benincasa hispida])

HSP 1 Score: 245.4 bits (625), Expect = 3.4e-61
Identity = 126/152 (82.89%), Postives = 134/152 (88.16%), Query Frame = 0


Query: 1   MGFSWLVKSPKKEDEQEVPNSIWEDDFKAFFEVRDEDNP--PPVQQPDYHFHHHGQGGVM 60
           MGFSWLVKSPKKEDEQ+VPNSIWEDDFKAFFE+ DE+NP  PP+QQPDYHFH    G  M
Sbjct: 6   MGFSWLVKSPKKEDEQQVPNSIWEDDFKAFFELTDEENPPRPPLQQPDYHFH---DGAFM 65

Query: 61  ENKNNKVCLNLNLNYEEVLEAWSGRGSLWAAASCVNSNDPTQDSYMGEVPRMEEERTRRV 120
           ENK NK+ LNLNLNYEEVLEAWS RGSLWAAA+   ++D T D YMGEVPRMEEERTRRV
Sbjct: 66  ENK-NKISLNLNLNYEEVLEAWSDRGSLWAAAASSLTDDATHDPYMGEVPRMEEERTRRV 125

Query: 121 LRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIK 151
           LRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIK
Sbjct: 126 LRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIK 153

[Close]

BLAST of ClCG03G000330 vs. NCBI nr
Match: KGN65847.1 (hypothetical protein Csa_023240 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-44
Identity = 105/156 (67.31%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 3   FSWLVKSPKKE--DEQEV---PNSIWEDDFKAFFEVRDEDN-PPPVQQPDYHFHHHGQGG 62
           FSWLVKSPKKE   EQ+V   P+SIWEDDF+AFF++  E+  PPP+  PDY+   +    
Sbjct: 8   FSWLVKSPKKELLHEQQVVPTPSSIWEDDFRAFFDLTHEETPPPPLHHPDYYHFQNHVND 67

Query: 63  VMENKNNKVCLNLNLNYEEVLEAWSGRGSLWAAASCVNSNDPTQDSYMGEVP--RMEEER 122
           VMEN N    LNLNLNYEEVLEAWS RGSLWAAAS  +SND T   YMGEVP  RMEEER
Sbjct: 68  VMENNNKVSNLNLNLNYEEVLEAWSDRGSLWAAASSSHSNDSTHTPYMGEVPIIRMEEER 127

Query: 123 TRRVLRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIK 151
            RRV RYKEKR  R+F KKIRYQVRKLNA++RPRIK
Sbjct: 128 RRRVKRYKEKRQARIFCKKIRYQVRKLNADRRPRIK 163

[Close]

BLAST of ClCG03G000330 vs. NCBI nr
Match: XP_023520168.1 (zinc finger protein CONSTANS-LIKE 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.0 bits (445), Expect = 2.5e-40
Identity = 113/200 (56.50%), Postives = 125/200 (62.50%), Query Frame = 0


Query: 1   MGFSWLVKSPKK---EDEQEVPNSIWEDDFKAFFEVRDEDNPPPVQQP------------ 60
           MG+S L+KSPKK   E+EQEVPNSIW DDFKAFFE+ +E+  P  QQ             
Sbjct: 1   MGYSSLLKSPKKEGAEEEQEVPNSIW-DDFKAFFELNNEEKLPLQQQENFSIVNGGPLNW 60

Query: 61  ---DYHFHH-------------HGQG-------------------GVMENKNNKVCLNLN 120
              D+H +H             HG G                   GVME+K  K  LNLN
Sbjct: 61  DLMDHHSNHQFSLSETKTNHGGHGDGVEAEAFSRVVPKACSFDGDGVMESK-KKASLNLN 120

Query: 121 LNYEEVLEAWSGRGSLWAAASCVNSNDPTQDSYMGEVPRMEEERTRRVLRYKEKRHTRLF 151
           LNYEEV EAWSGRGSLWAA     SN PT + YMGEVPRMEEERTRRVLRY+EKR TRLF
Sbjct: 121 LNYEEVSEAWSGRGSLWAAGGSSPSN-PTHNVYMGEVPRMEEERTRRVLRYREKRLTRLF 180

[Close]

BLAST of ClCG03G000330 vs. ExPASy Swiss-Prot
Match: Q9C9A9 (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-11
Identity = 53/149 (35.57%), Postives = 70/149 (46.98%), Query Frame = 0


Query: 23  WEDDFKAFFEVRDEDNPPPVQQPDYHFHHHGQGGVMENKNNKVCLNLNLNYEEVLEAWSG 82
           +E + K    V+DED      + +             +K+ K  L L L+Y  V+ AW  
Sbjct: 233 FEINCKDLKRVKDEDEEEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDYGAVISAWDN 292

Query: 83  RGSLWAAA---SCVNSNDPTQDSYMGEVPRM------------------EEERTRRVLRY 142
            GS W       C+   +      +G   ++                  + ER  RVLRY
Sbjct: 293 HGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARVLRY 352

Query: 143 KEKRHTRLFSKKIRYQVRKLNAEKRPRIK 151
           KEKR TRLFSKKIRY+VRKLNAE+RPRIK
Sbjct: 353 KEKRRTRLFSKKIRYEVRKLNAEQRPRIK 381

[Close]

BLAST of ClCG03G000330 vs. ExPASy Swiss-Prot
Match: Q8RWD0 (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 5.7e-11
Identity = 71/189 (37.57%), Postives = 90/189 (47.62%), Query Frame = 0


Query: 4   SWLVKSPKKEDEQEVPN------SIWEDDFKAFFEVRDEDNPPPVQQP-DYHFHHH-GQG 63
           S + K  K E E+EV         I++DD K      D D   P +   DY   H   + 
Sbjct: 215 SEMFKIEKDEIEEEVEEIKAMSMDIFDDDRK------DVDGTVPFELSFDYESSHKTSEE 274

Query: 64  GVMEN-------------KNNKVCLNLNLNYEEVLEAWSGRG---------------SLW 123
            VM+N             + +K  L L LNY+ V+  W G+G               S W
Sbjct: 275 EVMKNVESSGECVVKVKEEEHKNVLMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGW 334

Query: 124 AAASCV-NSNDPT-QDSYMGE-VPRM---EEERTRRVLRYKEKRHTRLFSKKIRYQVRKL 151
            A S V N  + T Q  Y+G  +P     +  R  RV RY+EKR TRLFSKKIRY+VRKL
Sbjct: 335 PAFSMVENGGESTHQKQYVGGCLPSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKL 394

[Close]

BLAST of ClCG03G000330 vs. ExPASy Swiss-Prot
Match: Q8LG76 (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-10
Identity = 54/152 (35.53%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 23  WEDDFKAFFEVRDEDNPPPVQQPDYHFH-HHGQGGVMENKNNKVCLNLNLNYEEVLEAWS 82
           +E   K  F+  +ED    V +       +   GG+ E K  K  L L L+YE V+  W 
Sbjct: 245 YEYTHKTTFDEGEEDEKEDVMKNVMEMGVNEMSGGIKEEKKEK-ALMLRLDYESVISTWG 304

Query: 83  GRGSLWAA---------ASCVNSNDPTQDS--------------YMGEVPRMEEERTRRV 142
           G+G  W A           C  ++   +                ++G+    +  R  RV
Sbjct: 305 GQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRGLGLHLGDAG--DGGREARV 364

Query: 143 LRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIK 151
            RY+EKR TRLFSKKIRY+VRKLNAEKRPR+K
Sbjct: 365 SRYREKRRTRLFSKKIRYEVRKLNAEKRPRMK 393

[Close]

BLAST of ClCG03G000330 vs. ExPASy Swiss-Prot
Match: Q9LU68 (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09
Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 69  LNLNYEEVLEAWSGRGSLWAAASCVNSNDPTQDSYMGEVPRMEEE--RTRRVLRYKEKRH 128
           L L+Y+ VLEAWS + S +       S     ++ + ++    +   R   VLRYKEKR 
Sbjct: 337 LKLDYDGVLEAWSDKTSPF-PDEIQGSEAVDVNARLAQIDLFGDSGMREASVLRYKEKRR 396

Query: 129 TRLFSKKIRYQVRKLNAEKRPRIK 151
           TRLFSKKIRYQVRKLNA++RPR+K
Sbjct: 397 TRLFSKKIRYQVRKLNADQRPRMK 419

[Close]

BLAST of ClCG03G000330 vs. ExPASy Swiss-Prot
Match: Q9M9B3 (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 39/81 (48.15%), Postives = 49/81 (60.49%), Query Frame = 0


Query: 71  LNYEEVLEAWSGRGSLWAAASCVNSNDPTQDSYMG-EVPRMEEERTRRVLRYKEKRHTRL 130
           LNYE V+ AW  + S        N+    Q    G E  R+  ER  RV RY++KR  RL
Sbjct: 230 LNYENVIAAWDKQES---PRDVKNNTSSFQLVPPGIEEKRVRSEREARVWRYRDKRKNRL 289

Query: 131 FSKKIRYQVRKLNAEKRPRIK 151
           F KKIRY+VRK+NA+KRPR+K
Sbjct: 290 FEKKIRYEVRKVNADKRPRMK 307

[Close]

BLAST of ClCG03G000330 vs. ExPASy TrEMBL
Match: A0A0A0LYC0 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G533540 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 8.2e-45
Identity = 105/156 (67.31%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 3   FSWLVKSPKKE--DEQEV---PNSIWEDDFKAFFEVRDEDN-PPPVQQPDYHFHHHGQGG 62
           FSWLVKSPKKE   EQ+V   P+SIWEDDF+AFF++  E+  PPP+  PDY+   +    
Sbjct: 8   FSWLVKSPKKELLHEQQVVPTPSSIWEDDFRAFFDLTHEETPPPPLHHPDYYHFQNHVND 67

Query: 63  VMENKNNKVCLNLNLNYEEVLEAWSGRGSLWAAASCVNSNDPTQDSYMGEVP--RMEEER 122
           VMEN N    LNLNLNYEEVLEAWS RGSLWAAAS  +SND T   YMGEVP  RMEEER
Sbjct: 68  VMENNNKVSNLNLNLNYEEVLEAWSDRGSLWAAASSSHSNDSTHTPYMGEVPIIRMEEER 127

Query: 123 TRRVLRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIK 151
            RRV RYKEKR  R+F KKIRYQVRKLNA++RPRIK
Sbjct: 128 RRRVKRYKEKRQARIFCKKIRYQVRKLNADRRPRIK 163

[Close]

BLAST of ClCG03G000330 vs. ExPASy TrEMBL
Match: A0A6J1HJ00 (zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita moschata OX=3662 GN=LOC111464884 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.0e-39
Identity = 111/202 (54.95%), Postives = 124/202 (61.39%), Query Frame = 0


Query: 1   MGFSWLVKSPKK---EDEQEVPNSIWEDDFKAFFEVRDEDNPPPVQQP------------ 60
           MG+S L+KSPKK   E+EQEVPNSIW DDFKAFFE+ +E+  P  QQ             
Sbjct: 1   MGYSSLLKSPKKEGEEEEQEVPNSIW-DDFKAFFELSNEEKLPLQQQENFSIVNGGPLNW 60

Query: 61  ---DYHFHH-------------HGQG---------------------GVMENKNNKVCLN 120
              D+H +H             HG G                     GVM++K  K  LN
Sbjct: 61  DLMDHHSNHQFSLSETKANHGGHGYGIEAEAEAFSRVVPKACSFDGDGVMKSK-KKASLN 120

Query: 121 LNLNYEEVLEAWSGRGSLWAAASCVNSNDPTQDSYMGEVPRMEEERTRRVLRYKEKRHTR 151
           LNLNYEEV EAWSGRGSLWA      SN PT + YMGEVPRMEEERTRRVLRY+EKR TR
Sbjct: 121 LNLNYEEVSEAWSGRGSLWAGGGSSPSN-PTHNVYMGEVPRMEEERTRRVLRYREKRLTR 180

[Close]

BLAST of ClCG03G000330 vs. ExPASy TrEMBL
Match: A0A6J1I4F9 (zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita maxima OX=3661 GN=LOC111469554 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 6.3e-37
Identity = 109/201 (54.23%), Postives = 122/201 (60.70%), Query Frame = 0


Query: 1   MGFSWLVKSPKK--EDEQEVPNSIWEDDFKAFFEVRDEDNPPPVQQP------------- 60
           MG+S L+K  KK  E+EQEVPNSI  DDFKAFFE+ +E+  P  QQ              
Sbjct: 1   MGYSSLLKGLKKEEEEEQEVPNSI-RDDFKAFFELSNEEKLPLQQQENFSIVNGGSLNWD 60

Query: 61  --DYHFHH-------------HGQG---------------------GVMENKNNKVCLNL 120
             D+H +H             HG G                     GVM++K  K  LNL
Sbjct: 61  LMDHHSNHQFSLSETKTNHGGHGDGVEAEAEVFSRVVPKACSFDGDGVMKSK-KKASLNL 120

Query: 121 NLNYEEVLEAWSGRGSLWAAASCVNSNDPTQDSYMGEVPRMEEERTRRVLRYKEKRHTRL 151
           NLNYEEV EAWSGRGSLWAA     SN PT + YMGEVPRMEEERTRRVLRY+EKR TRL
Sbjct: 121 NLNYEEVSEAWSGRGSLWAAGGSSPSN-PTHNVYMGEVPRMEEERTRRVLRYREKRLTRL 180

[Close]

BLAST of ClCG03G000330 vs. ExPASy TrEMBL
Match: A0A6J1DMX8 (zinc finger protein CONSTANS-LIKE 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022043 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.9e-33
Identity = 94/191 (49.21%), Postives = 111/191 (58.12%), Query Frame = 0


Query: 1   MGFSWLVKSPKKEDEQEVPNSIWEDDFKAFFEVRDEDNPPPVQQPDYHFHHHG------- 60
           MG+SW +KSP KE+EQEVPN   + DF+AF E  D+  PPP +  D    + G       
Sbjct: 1   MGYSWFLKSP-KEEEQEVPNGAVKGDFEAFLE--DKLPPPPPEAEDNFLAYGGPPDWGLN 60

Query: 61  ----------------------------------QGGVMENKNNKVCLNLNLNYEEVLEA 120
                                              G   + +  ++ L LNLNYEEVLEA
Sbjct: 61  FDYEYFPVPVLSQTNIVGANEEAAAAAAFGRVSDDGDGRKKEEEEISLKLNLNYEEVLEA 120

Query: 121 WSGRGSLWAAASCVNSNDPTQDSYMGEVPRMEEERTRRVLRYKEKRHTRLFSKKIRYQVR 151
           WSGRGSLWAAA   + ++ T  +YMGEVPR+EEER RRVLRYKEKRH RLFS KIRYQVR
Sbjct: 121 WSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKRHNRLFSNKIRYQVR 180

[Close]

BLAST of ClCG03G000330 vs. ExPASy TrEMBL
Match: A0A6J1DLJ5 (uncharacterized protein LOC111022043 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022043 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27
Identity = 83/180 (46.11%), Postives = 100/180 (55.56%), Query Frame = 0


Query: 1   MGFSWLVKSPKKEDEQEVPNSIWEDDFKAFFEVRDEDNPPPVQQPDYHFHHHG------- 60
           MG+SW +KSP KE+EQEVPN   + DF+AF E  D+  PPP +  D    + G       
Sbjct: 1   MGYSWFLKSP-KEEEQEVPNGAVKGDFEAFLE--DKLPPPPPEAEDNFLAYGGPPDWGLN 60

Query: 61  ----------------------------------QGGVMENKNNKVCLNLNLNYEEVLEA 120
                                              G   + +  ++ L LNLNYEEVLEA
Sbjct: 61  FDYEYFPVPVLSQTNIVGANEEAAAAAAFGRVSDDGDGRKKEEEEISLKLNLNYEEVLEA 120

Query: 121 WSGRGSLWAAASCVNSNDPTQDSYMGEVPRMEEERTRRVLRYKEKRHTRLFSKKIRYQVR 140
           WSGRGSLWAAA   + ++ T  +YMGEVPR+EEER RRVLRYKEKRH RLFS KIRYQ R
Sbjct: 121 WSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKRHNRLFSNKIRYQGR 177

[Close]

BLAST of ClCG03G000330 vs. TAIR 10
Match: AT1G07050.1 (CCT motif family protein )

HSP 1 Score: 86.7 bits (213), Expect = 1.9e-17
Identity = 63/144 (43.75%), Postives = 83/144 (57.64%), Query Frame = 0


Query: 17  EVPNSIWEDDFKAFFEVRDEDNPPPVQQPDYHFHHHGQGGVMENK-----NNKVCLNLNL 76
           E+    WE+D     +V +E+      Q    F      G  ENK     +  + L LNL
Sbjct: 57  ELTWDFWEEDEDE--DVGEEEKRSSTDQEGSSF------GFWENKPTDYEDKDLGLKLNL 116

Query: 77  NYEEVLEAWSG-RGSLWAAASCVNSNDPTQDSYMGEVPRMEEERTRR----VLRYKEKRH 136
           N++EV++AWS  +  LW   S ++++      Y GEVP +EE+R  R    VLRYKEKR 
Sbjct: 117 NHQEVIDAWSDHQKPLWTDTSTLDNS-----VYRGEVPVIEEKRNMRREASVLRYKEKRQ 176

Query: 137 TRLFSKKIRYQVRKLNAEKRPRIK 151
           +RLFSKKIRYQVRKLNA+KRPR K
Sbjct: 177 SRLFSKKIRYQVRKLNADKRPRFK 187

[Close]

BLAST of ClCG03G000330 vs. TAIR 10
Match: AT5G14370.1 (CCT motif family protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 48/110 (43.64%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 59  ENKNNKVCLNLNLNYEEVLEAWSGRGSLWA-----------AASCVNSNDPTQDSYMGEV 118
           +  + +  L L L+YE+++EAWS +G+L+             AS    ND  +   +  V
Sbjct: 221 DGNDGRPSLALKLDYEQIMEAWSDKGTLYVDGEPPQTVPDLHASADGFNDGGEAGNLWAV 280

Query: 119 PRMEE-------ERTRRVLRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIK 151
           P ME         R   +LRYKEKR  RLFSK+IRYQVRKLNAEKRPR+K
Sbjct: 281 PEMETTERLWRGHREASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVK 330

[Close]

BLAST of ClCG03G000330 vs. TAIR 10
Match: AT1G73870.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 71.2 bits (173), Expect = 8.2e-13
Identity = 53/149 (35.57%), Postives = 70/149 (46.98%), Query Frame = 0


Query: 23  WEDDFKAFFEVRDEDNPPPVQQPDYHFHHHGQGGVMENKNNKVCLNLNLNYEEVLEAWSG 82
           +E + K    V+DED      + +             +K+ K  L L L+Y  V+ AW  
Sbjct: 233 FEINCKDLKRVKDEDEEEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDYGAVISAWDN 292

Query: 83  RGSLWAAA---SCVNSNDPTQDSYMGEVPRM------------------EEERTRRVLRY 142
            GS W       C+   +      +G   ++                  + ER  RVLRY
Sbjct: 293 HGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARVLRY 352

Query: 143 KEKRHTRLFSKKIRYQVRKLNAEKRPRIK 151
           KEKR TRLFSKKIRY+VRKLNAE+RPRIK
Sbjct: 353 KEKRRTRLFSKKIRYEVRKLNAEQRPRIK 381

[Close]

BLAST of ClCG03G000330 vs. TAIR 10
Match: AT1G25440.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 68.9 bits (167), Expect = 4.1e-12
Identity = 71/189 (37.57%), Postives = 90/189 (47.62%), Query Frame = 0


Query: 4   SWLVKSPKKEDEQEVPN------SIWEDDFKAFFEVRDEDNPPPVQQP-DYHFHHH-GQG 63
           S + K  K E E+EV         I++DD K      D D   P +   DY   H   + 
Sbjct: 215 SEMFKIEKDEIEEEVEEIKAMSMDIFDDDRK------DVDGTVPFELSFDYESSHKTSEE 274

Query: 64  GVMEN-------------KNNKVCLNLNLNYEEVLEAWSGRG---------------SLW 123
            VM+N             + +K  L L LNY+ V+  W G+G               S W
Sbjct: 275 EVMKNVESSGECVVKVKEEEHKNVLMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGW 334

Query: 124 AAASCV-NSNDPT-QDSYMGE-VPRM---EEERTRRVLRYKEKRHTRLFSKKIRYQVRKL 151
            A S V N  + T Q  Y+G  +P     +  R  RV RY+EKR TRLFSKKIRY+VRKL
Sbjct: 335 PAFSMVENGGESTHQKQYVGGCLPSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKL 394

[Close]

BLAST of ClCG03G000330 vs. TAIR 10
Match: AT4G25990.1 (CCT motif family protein )

HSP 1 Score: 68.9 bits (167), Expect = 4.1e-12
Identity = 44/85 (51.76%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 69  LNLNYEEVLEAWSGRGSLWAAASCVNSNDPTQ-DSYMGEVPRMEEE--RTRRVLRYKEKR 128
           L L+Y+ VLEAWSG+ S ++     +  D       +GE+    E   R   VLRYKEKR
Sbjct: 293 LKLDYDGVLEAWSGKESPFSDEILGSDADGVDFHVRLGEIDLFGESGMREASVLRYKEKR 352

Query: 129 HTRLFSKKIRYQVRKLNAEKRPRIK 151
             RLFSKKIRYQVRKLNA++RPR+K
Sbjct: 353 RNRLFSKKIRYQVRKLNADQRPRMK 377

The following BLAST results are available for this feature:

BLAST of ClCG03G000330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893945.1	2.0e-61	82.35	zinc finger protein CONSTANS-LIKE 7 isoform X2 [Benincasa hispida]	[more]
XP_038893946.1	3.4e-61	82.89	zinc finger protein CONSTANS-LIKE 7 isoform X3 [Benincasa hispida]	[more]
XP_038893944.1	3.4e-61	82.89	zinc finger protein CONSTANS-LIKE 16 isoform X1 [Benincasa hispida]	[more]
KGN65847.1	1.7e-44	67.31	hypothetical protein Csa_023240 [Cucumis sativus]	[more]
XP_023520168.1	2.5e-40	56.50	zinc finger protein CONSTANS-LIKE 6-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG03G000330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9A9	1.2e-11	35.57	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2...	[more]
Q8RWD0	5.7e-11	37.57	Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE...	[more]
Q8LG76	2.2e-10	35.53	Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2...	[more]
Q9LU68	1.8e-09	48.81	Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 P...	[more]
Q9M9B3	1.6e-08	48.15	Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1...	[more]

BLAST of ClCG03G000330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYC0	8.2e-45	67.31	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G533540 PE=4 SV...	[more]
A0A6J1HJ00	3.0e-39	54.95	zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita moschata OX=3662 GN=LOC11146488...	[more]
A0A6J1I4F9	6.3e-37	54.23	zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita maxima OX=3661 GN=LOC111469554 ...	[more]
A0A6J1DMX8	1.9e-33	49.21	zinc finger protein CONSTANS-LIKE 6 isoform X1 OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1DLJ5	1.2e-27	46.11	uncharacterized protein LOC111022043 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of ClCG03G000330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07050.1	1.9e-17	43.75	CCT motif family protein	[more]
AT5G14370.1	1.1e-14	43.64	CCT motif family protein	[more]
AT1G73870.1	8.2e-13	35.57	B-box type zinc finger protein with CCT domain	[more]
AT1G25440.1	4.1e-12	37.57	B-box type zinc finger protein with CCT domain	[more]
AT4G25990.1	4.1e-12	51.76	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 114..150 e-value: 5.9E-13 score: 48.7
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 114..156 score: 11.994741
None	No IPR available	PANTHER	PTHR31874:SF41	CCT MOTIF FAMILY PROTEIN	coord: 57..150
None	No IPR available	PANTHER	PTHR31874	CCT MOTIF FAMILY PROTEIN, EXPRESSED	coord: 57..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G000330.2	ClCG03G000330.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity