ClCG03G000260 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG03G000260
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Epidermal patterning factor-like protein
Location	CG_Chr03: 288150 .. 290373 (-)
RNA-Seq Expression	ClCG03G000260
Synteny	ClCG03G000260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTAGTCTCTCTCTCTCTCTGTACTCTTAAAACCATTCTCCCCACATAAATCAATTCCTTCTCTGCATCCACATCTTTGGATCAAAAATCATAGTGTAGGCAAGGCATGACCAAAGTCCCATCTTCTATTAATTGACTTCTACTTAATTCCTAGAAGAAGAGAGAAATAGCTCCAAACTTGTCAATCATATCATCATTGCTTTACTTGTTCAAGTAAACCTTTTCTTGATTTCATTCAAATTTTCTTCAGCTGTGGATGGAGTTGAATAGAAACAGAGTAGTCAGCGAGAACAAAACCACCCATAAACCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTGTTACCATTCTGTAGCAGCATCATGAGTAAATCTAATGGGGTTCCAGGTGAGAGATCCTTAAAACAGTTTTAGCTTTTAAACATTGCTATATTATCTCTGATCTGCTCTTGTTCTTCAGATAACACTACGCCCTGCTCATCTGCTAAATCTGGTCAGGTAATTAATTAAATTTATTTTTACTTTGTCATACTGTTGTTTTTTCAATGTACACAACCATTGATAATTACAAAATGGCCAACCCAGTAGCTAGCTAGCTAATAGTAGAAGCTAGGTCCATACATTATATATAACCATAATCCATCACATCTCTTCCAAAAAAAAAACATATCCATCAATTCCAACCCTTCCTAAGCTGGCCTCAGACACTCACTCTCAACCCTACATAACCATTATTTTCAAACACTAAAATATTTTCGTCTATCTCCGACTGCACCCATTTTTGTGAAGCCTATCTAAGTCTCCAATCACGGGATGTTGACAAATTTTTCTCTCCTTTATAAAGGTTTTTTTTTTTTTCTTTCTGTTTTTTTCTTTGTGATTGATGGCGATGGGTGTAGCATGAACTGCACTTGAGTATTACTCAAACAAACATCCTTTTTGGACCTACTATCACATCTTACTTTCTTGATAAAGAAATCTATATATATACACACACACATAAGAAAAATAATTGGGTGTTGGCTAGTTATGCCTATTTTGTGTAGTCTACCAGTTGACTAATTAAAAACTACCATGTAGCAAAGAATTTTAAATTATTATTTTCTTGTCATGTGATAAATGAAGGGGCTATAAAGGAGAAAATTAATATAACTATGGTAGTATGGAAAATTTTTAAAATCTATTTGTCTTTTGTAAATTGTTACTAACGTAGCATTTAAAAATTATGTGAGTTTCATGAAATAAATGAATAAATCATTTAATGAATAATGAATGAAAGGGATAGATATTAGAAAATACTATTTTTTTTTTTTCATAAGGAGAGATTATAATCTATAGCCTTACCTATCTTTAGTGCAACCCACCCTTAACAATATGCCAAGTGGGGAAAAATTTTAAGAAGTTGAATTTTTCTATTTTATTTCTAGTCGGTGAAGTAGAAAGGAGCATTGAATTAGATGTAGGTATATATATTATATGTTTGCTTGGACTCAACATCGATTTTCAAATGTCCTCAGCTCACTCGTTTCTTTTTGGAATACGAGAATTTAATACATTCATATGTCAAATGAACTGTAGTTGTTTTTGATTTCTCTCCCACCAATTAAACAATAATTGATATATACACATTGATATGAGTAGTCCAAGTAACAGTTGTTGTGGGTTAAGTTTGCAGTGGTTTAATATTTACATTTTGTGCAGTTACAGCACTATCACTACTCCATCGCTAATTGTGAAGATCAAGAGTTCATGAGCTTACCGAGAAGAGGATTGGGTGGGCCGGGATCGTCTCCGCCGCGGTGTGCCTCAAAGTGCGGGAAATGCACCCCCTGCACGGCGGTTCATGTGCCGGTGCCACCAGGAACTCCGGTGACGGCGGAGTACTACCCGGAAGCCTGGAGATGCAAATGTGGGAATAAGCTTTACATGCCCTGATCGGAAAAAGCATGCCCCGGCCGGTCGTCGACCCCCTTTACGTATGCTATTTGTCTCCGCCGATGAACCGGCATGAAAAACTATGAATTTAATCGCCGGCTGGTCTATGTAATTAAGTTGGGTATGTGCCAATTACGGCTCACTATTTTCATCCCACATCTCTATGTTGTATAAATAATATAGGTTTATAGCGAATTATAAATTATGTCTGTTATTTATATATATAAAAATTATATGTGTGTACCATGGGTGGATGAAGCTATTCTTAAA

mRNA sequence

AAAATTAGTCTCTCTCTCTCTCTGTACTCTTAAAACCATTCTCCCCACATAAATCAATTCCTTCTCTGCATCCACATCTTTGGATCAAAAATCATAGTGTAGGCAAGGCATGACCAAAGTCCCATCTTCTATTAATTGACTTCTACTTAATTCCTAGAAGAAGAGAGAAATAGCTCCAAACTTGTCAATCATATCATCATTGCTTTACTTGTTCAAGTAAACCTTTTCTTGATTTCATTCAAATTTTCTTCAGCTGTGGATGGAGTTGAATAGAAACAGAGTAGTCAGCGAGAACAAAACCACCCATAAACCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTGTTACCATTCTGTAGCAGCATCATGAGTAAATCTAATGGGGTTCCAGATAACACTACGCCCTGCTCATCTGCTAAATCTGGTCAGTGCAACCCACCCTTAACAATATGCCAAGTGGGGAAAAATTTTAAGAAGTTGAATTTTTCTATTTTATTTCTAGTCGGTGAAGTAGAAAGGAGCATTGAATTAGATTTACAGCACTATCACTACTCCATCGCTAATTGTGAAGATCAAGAGTTCATGAGCTTACCGAGAAGAGGATTGGGTGGGCCGGGATCGTCTCCGCCGCGGTGTGCCTCAAAGTGCGGGAAATGCACCCCCTGCACGGCGGTTCATGTGCCGGTGCCACCAGGAACTCCGGTGACGGCGGAGTACTACCCGGAAGCCTGGAGATGCAAATGTGGGAATAAGCTTTACATGCCCTGATCGGAAAAAGCATGCCCCGGCCGGTCGTCGACCCCCTTTACGTATGCTATTTGTCTCCGCCGATGAACCGGCATGAAAAACTATGAATTTAATCGCCGGCTGGTCTATGTAATTAAGTTGGGTATGTGCCAATTACGGCTCACTATTTTCATCCCACATCTCTATGTTGTATAAATAATATAGGTTTATAGCGAATTATAAATTATGTCTGTTATTTATATATATAAAAATTATATGTGTGTACCATGGGTGGATGAAGCTATTCTTAAA

Coding sequence (CDS)

ATGGAGTTGAATAGAAACAGAGTAGTCAGCGAGAACAAAACCACCCATAAACCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTGTTACCATTCTGTAGCAGCATCATGAGTAAATCTAATGGGGTTCCAGATAACACTACGCCCTGCTCATCTGCTAAATCTGGTCAGTGCAACCCACCCTTAACAATATGCCAAGTGGGGAAAAATTTTAAGAAGTTGAATTTTTCTATTTTATTTCTAGTCGGTGAAGTAGAAAGGAGCATTGAATTAGATTTACAGCACTATCACTACTCCATCGCTAATTGTGAAGATCAAGAGTTCATGAGCTTACCGAGAAGAGGATTGGGTGGGCCGGGATCGTCTCCGCCGCGGTGTGCCTCAAAGTGCGGGAAATGCACCCCCTGCACGGCGGTTCATGTGCCGGTGCCACCAGGAACTCCGGTGACGGCGGAGTACTACCCGGAAGCCTGGAGATGCAAATGTGGGAATAAGCTTTACATGCCCTGA

Protein sequence

MELNRNRVVSENKTTHKPIFFFFFFFFFFFFLFLLPFCSSIMSKSNGVPDNTTPCSSAKSGQCNPPLTICQVGKNFKKLNFSILFLVGEVERSIELDLQHYHYSIANCEDQEFMSLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP

Homology

[Close]

BLAST of ClCG03G000260 vs. NCBI nr
Match: XP_038895367.1 (EPIDERMAL PATTERNING FACTOR-like protein 6 [Benincasa hispida])

HSP 1 Score: 201.1 bits (510), Expect = 8.1e-48
Identity = 114/177 (64.41%), Postives = 116/177 (65.54%), Query Frame = 0


Query: 1   MELNRNRVVSENKTTHKPIFFFFFFFFFFF---FLFLLPFCSSIMSKSNGVPDNTTPCSS 60
           ME NRNRVVSENKTTHKPI FFFFFFFF F   F  LL FCSSI+S S    DN    SS
Sbjct: 1   MEFNRNRVVSENKTTHKPIIFFFFFFFFLFLMLFFILLSFCSSIISSS----DNIRRFSS 60

Query: 61  AKSGQCNPPLTICQVGKNFKKLNFSILFLVGEVERSIELDLQHYHYSIANCEDQEFMSLP 120
           AK G                                     QHY YSIAN EDQE +SLP
Sbjct: 61  AKGG-------------------------------------QHYQYSIANYEDQE-LSLP 120

Query: 121 RRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
           RRGLGG GSSPPRCASKCGKCTPCTAVHVPV PGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 RRGLGGLGSSPPRCASKCGKCTPCTAVHVPVSPGTPVTAEYYPEAWRCKCGNKLYMP 135

[Close]

BLAST of ClCG03G000260 vs. NCBI nr
Match: XP_011658830.1 (EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis sativus] >KGN65854.1 hypothetical protein Csa_023188 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 4.6e-43
Identity = 108/184 (58.70%), Postives = 113/184 (61.41%), Query Frame = 0


Query: 1   MELNRNRVVSENKTTHKPI-----FFFFFFFFFFFFLFLL-PFCSSIMSKSNGVPDNTTP 60
           ME NR+RVV ENKT  KPI      F  FFFF F  +F+L  FCSSIMS  NG  DNT  
Sbjct: 1   MEFNRSRVVIENKTNPKPILILILIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDNTRS 60

Query: 61  CSSAKSGQCNPPLTICQVGKNFKKLNFSILFLVGEVERSIELDLQHYHYSIANCED---- 120
           CS  KS Q                  +SI                     IANCED    
Sbjct: 61  CSFGKSVQ------------------YSI---------------------IANCEDDHHQ 120

Query: 121 QEFMSLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNK 175
            +FM LPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNK
Sbjct: 121 DQFMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNK 145

[Close]

BLAST of ClCG03G000260 vs. NCBI nr
Match: XP_023525345.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.5 bits (402), Expect = 2.7e-35
Identity = 96/175 (54.86%), Postives = 109/175 (62.29%), Query Frame = 0


Query: 1   MELNRNRVVSENKTTHKPIFFFFFFFFFFFFLFLLPFCSSIMSKSNGVPDNTTPCSSAKS 60
           MEL+RN  ++E KT HK       F F F FLFL+ F  S++S +   PDN   CSSAK+
Sbjct: 1   MELSRN-TLTETKTAHKS------FSFLFLFLFLISFWCSMISSAG--PDNRC-CSSAKA 60

Query: 61  GQCN-PPLTICQVGKNFKKLNFSILFLVGEVERSIELDLQHYHYSIANCEDQEFMSLPRR 120
           G  N  P+T     K           L  +  R  +         I + EDQE  +L RR
Sbjct: 61  GHTNLQPITSSATWK-----------LPADGRRVAQPATA--EVVIGDHEDQELRTLARR 120

Query: 121 GLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
            LGGPGSSPPRCAS CGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 ELGGPGSSPPRCASMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152

[Close]

BLAST of ClCG03G000260 vs. NCBI nr
Match: KAA0060006.1 (EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis melo var. makuwa] >TYJ97264.1 EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 159.1 bits (401), Expect = 3.5e-35
Identity = 83/142 (58.45%), Postives = 87/142 (61.27%), Query Frame = 0


Query: 34  LLPFCSSIMSKSNGVPDNTTPCSSAKSGQCNPPLTICQVGKNFKKLNFSILFLVGEVERS 93
           L  FCSSI S SNG  DNT  CS  ++ Q                               
Sbjct: 5   LSSFCSSIRSSSNGDSDNTRSCSFVEAVQ------------------------------- 64

Query: 94  IELDLQHYHYSIANCEDQ-EFMSLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGT 153
                   +  IANCEDQ +FM LPRRGLGGPGSSPPRC SKCGKCTPCTAVHVPVPPGT
Sbjct: 65  --------YPMIANCEDQDQFMRLPRRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGT 107

Query: 154 PVTAEYYPEAWRCKCGNKLYMP 175
           PVTAEYYPEAWRCKCGNKLYMP
Sbjct: 125 PVTAEYYPEAWRCKCGNKLYMP 107

[Close]

BLAST of ClCG03G000260 vs. NCBI nr
Match: XP_022997734.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita maxima])

HSP 1 Score: 158.3 bits (399), Expect = 6.0e-35
Identity = 94/175 (53.71%), Postives = 109/175 (62.29%), Query Frame = 0


Query: 1   MELNRNRVVSENKTTHKPIFFFFFFFFFFFFLFLLPFCSSIMSKSNGVPDNTTPCSSAKS 60
           MEL+RN  ++E KT HK       F F F FL L+ F  S++S +   PDN   CSSAK+
Sbjct: 1   MELSRN-TLTETKTAHKS------FSFLFLFLILISFSCSMISSAG--PDNRC-CSSAKA 60

Query: 61  GQCN-PPLTICQVGKNFKKLNFSILFLVGEVERSIELDLQHYHYSIANCEDQEFMSLPRR 120
           G  N  P+T     K           L  +  R  + +       + + EDQE  +L RR
Sbjct: 61  GHTNLQPITSSATWK-----------LPADGRRVAQPNAA--EVVVGDHEDQELRTLARR 120

Query: 121 GLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
            LGGPGSSPPRCAS CGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 ELGGPGSSPPRCASMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152

[Close]

BLAST of ClCG03G000260 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-25
Identity = 50/57 (87.72%), Postives = 52/57 (91.23%), Query Frame = 0


Query: 118 RRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
           RR L G GSSPPRC+SKCG+CTPC  VHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of ClCG03G000260 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.3e-20
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 122 GGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
           GGPGSSPP C SKCGKC PC  VHVP+ PG  +  EYYPEAWRCKCGNKL+MP
Sbjct: 57  GGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of ClCG03G000260 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.7e-20
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 118 RRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
           ++ LGGPGS PP C  KCGKC PC AVHVP+ PG  +  EYYPEAWRCKCGNKL+MP
Sbjct: 51  QKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of ClCG03G000260 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-06
Identity = 23/49 (46.94%), Postives = 28/49 (57.14%), Query Frame = 0


Query: 126 SSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
           SSPP C +KC  C PC    + V P  P   +YYP+ W C C NK+Y P
Sbjct: 468 SSPPNCKNKCKGCQPCKPKLIIVHPNKP--QDYYPQKWVCSCHNKIYNP 514

[Close]

BLAST of ClCG03G000260 vs. ExPASy Swiss-Prot
Match: Q9FY19 (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-06
Identity = 23/49 (46.94%), Postives = 28/49 (57.14%), Query Frame = 0


Query: 126 SSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
           SSPP C +KC  C PC    + V P  P   +YYP+ W C C NK+Y P
Sbjct: 461 SSPPNCKNKCKGCQPCKPKLIIVHPNQP--EDYYPQRWVCSCHNKIYNP 507

[Close]

BLAST of ClCG03G000260 vs. ExPASy TrEMBL
Match: A0A0A0LXR9 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G533610 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.2e-43
Identity = 108/184 (58.70%), Postives = 113/184 (61.41%), Query Frame = 0


Query: 1   MELNRNRVVSENKTTHKPI-----FFFFFFFFFFFFLFLL-PFCSSIMSKSNGVPDNTTP 60
           ME NR+RVV ENKT  KPI      F  FFFF F  +F+L  FCSSIMS  NG  DNT  
Sbjct: 1   MEFNRSRVVIENKTNPKPILILILIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDNTRS 60

Query: 61  CSSAKSGQCNPPLTICQVGKNFKKLNFSILFLVGEVERSIELDLQHYHYSIANCED---- 120
           CS  KS Q                  +SI                     IANCED    
Sbjct: 61  CSFGKSVQ------------------YSI---------------------IANCEDDHHQ 120

Query: 121 QEFMSLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNK 175
            +FM LPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNK
Sbjct: 121 DQFMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNK 145

[Close]

BLAST of ClCG03G000260 vs. ExPASy TrEMBL
Match: A0A5D3BE35 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00580 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.7e-35
Identity = 83/142 (58.45%), Postives = 87/142 (61.27%), Query Frame = 0


Query: 34  LLPFCSSIMSKSNGVPDNTTPCSSAKSGQCNPPLTICQVGKNFKKLNFSILFLVGEVERS 93
           L  FCSSI S SNG  DNT  CS  ++ Q                               
Sbjct: 5   LSSFCSSIRSSSNGDSDNTRSCSFVEAVQ------------------------------- 64

Query: 94  IELDLQHYHYSIANCEDQ-EFMSLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGT 153
                   +  IANCEDQ +FM LPRRGLGGPGSSPPRC SKCGKCTPCTAVHVPVPPGT
Sbjct: 65  --------YPMIANCEDQDQFMRLPRRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGT 107

Query: 154 PVTAEYYPEAWRCKCGNKLYMP 175
           PVTAEYYPEAWRCKCGNKLYMP
Sbjct: 125 PVTAEYYPEAWRCKCGNKLYMP 107

[Close]

BLAST of ClCG03G000260 vs. ExPASy TrEMBL
Match: A0A6J1KCE5 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492606 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.9e-35
Identity = 94/175 (53.71%), Postives = 109/175 (62.29%), Query Frame = 0


Query: 1   MELNRNRVVSENKTTHKPIFFFFFFFFFFFFLFLLPFCSSIMSKSNGVPDNTTPCSSAKS 60
           MEL+RN  ++E KT HK       F F F FL L+ F  S++S +   PDN   CSSAK+
Sbjct: 1   MELSRN-TLTETKTAHKS------FSFLFLFLILISFSCSMISSAG--PDNRC-CSSAKA 60

Query: 61  GQCN-PPLTICQVGKNFKKLNFSILFLVGEVERSIELDLQHYHYSIANCEDQEFMSLPRR 120
           G  N  P+T     K           L  +  R  + +       + + EDQE  +L RR
Sbjct: 61  GHTNLQPITSSATWK-----------LPADGRRVAQPNAA--EVVVGDHEDQELRTLARR 120

Query: 121 GLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
            LGGPGSSPPRCAS CGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 ELGGPGSSPPRCASMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152

[Close]

BLAST of ClCG03G000260 vs. ExPASy TrEMBL
Match: A0A6J1G961 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452110 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.4e-34
Identity = 94/175 (53.71%), Postives = 107/175 (61.14%), Query Frame = 0


Query: 1   MELNRNRVVSENKTTHKPIFFFFFFFFFFFFLFLLPFCSSIMSKSNGVPDNTTPCSSAKS 60
           MEL RN  ++E KT HK     F F F F FL L+ F  S++S +   PDN   CSSAK+
Sbjct: 1   MELRRN-TLTETKTAHKS----FSFSFLFLFLILISFSCSMISSAG--PDNRC-CSSAKA 60

Query: 61  GQCN-PPLTICQVGKNFKKLNFSILFLVGEVERSIELDLQHYHYSIANCEDQEFMSLPRR 120
           G  N  P+T     K           L  +  R  +         + + EDQE  +L RR
Sbjct: 61  GHTNLQPITSSATWK-----------LPADGRRVAQPATA--EVVVGDHEDQELRTLARR 120

Query: 121 GLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
            LGGPGSSPPRC S CGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 ELGGPGSSPPRCTSMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 154

[Close]

BLAST of ClCG03G000260 vs. ExPASy TrEMBL
Match: A0A6J1KAS0 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492606 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 3.2e-34
Identity = 93/175 (53.14%), Postives = 108/175 (61.71%), Query Frame = 0


Query: 1   MELNRNRVVSENKTTHKPIFFFFFFFFFFFFLFLLPFCSSIMSKSNGVPDNTTPCSSAKS 60
           MEL+RN  ++E KT HK       F F F FL L+ F  S++S +    DN   CSSAK+
Sbjct: 1   MELSRN-TLTETKTAHKS------FSFLFLFLILISFSCSMISSA----DNRC-CSSAKA 60

Query: 61  GQCN-PPLTICQVGKNFKKLNFSILFLVGEVERSIELDLQHYHYSIANCEDQEFMSLPRR 120
           G  N  P+T     K           L  +  R  + +       + + EDQE  +L RR
Sbjct: 61  GHTNLQPITSSATWK-----------LPADGRRVAQPNAA--EVVVGDHEDQELRTLARR 120

Query: 121 GLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
            LGGPGSSPPRCAS CGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 ELGGPGSSPPRCASMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 150

[Close]

BLAST of ClCG03G000260 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 116.7 bits (291), Expect = 1.9e-26
Identity = 50/57 (87.72%), Postives = 52/57 (91.23%), Query Frame = 0


Query: 118 RRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
           RR L G GSSPPRC+SKCG+CTPC  VHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 174 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 230

[Close]

BLAST of ClCG03G000260 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 116.7 bits (291), Expect = 1.9e-26
Identity = 50/57 (87.72%), Postives = 52/57 (91.23%), Query Frame = 0


Query: 118 RRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
           RR L G GSSPPRC+SKCG+CTPC  VHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of ClCG03G000260 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 99.4 bits (246), Expect = 3.1e-21
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 122 GGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
           GGPGSSPP C SKCGKC PC  VHVP+ PG  +  EYYPEAWRCKCGNKL+MP
Sbjct: 57  GGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

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BLAST of ClCG03G000260 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 98.2 bits (243), Expect = 6.9e-21
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 118 RRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 175
           ++ LGGPGS PP C  KCGKC PC AVHVP+ PG  +  EYYPEAWRCKCGNKL+MP
Sbjct: 51  QKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

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BLAST of ClCG03G000260 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 3.1e-05
Identity = 26/75 (34.67%), Postives = 32/75 (42.67%), Query Frame = 0


Query: 125 GSSPPRCAS-KCGKCTPCTAVHVPVPPGT----PVT--------------------AEYY 175
           GS PPRC   +C  C  C A+ VP  P T    P+T                      Y 
Sbjct: 54  GSRPPRCERVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYK 113

The following BLAST results are available for this feature:

BLAST of ClCG03G000260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895367.1	8.1e-48	64.41	EPIDERMAL PATTERNING FACTOR-like protein 6 [Benincasa hispida]	[more]
XP_011658830.1	4.6e-43	58.70	EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis sativus] >KGN65854.1 hypothe...	[more]
XP_023525345.1	2.7e-35	54.86	EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita pepo subsp. pep...	[more]
KAA0060006.1	3.5e-35	58.45	EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis melo var. makuwa] >TYJ97264....	[more]
XP_022997734.1	6.0e-35	53.71	EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita maxima]	[more]

BLAST of ClCG03G000260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1PEY6	2.6e-25	87.72	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q2V3I3	4.3e-20	75.47	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LUH9	9.7e-20	70.18	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q7M1E7	1.6e-06	46.94	Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1	[more]
Q9FY19	1.6e-06	46.94	Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1	[more]

BLAST of ClCG03G000260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXR9	2.2e-43	58.70	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G533...	[more]
A0A5D3BE35	1.7e-35	58.45	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1KCE5	2.9e-35	53.71	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1G961	1.4e-34	53.71	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KAS0	3.2e-34	53.14	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of ClCG03G000260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30370.1	1.9e-26	87.72	allergen-related	[more]
AT2G30370.2	1.9e-26	87.72	allergen-related	[more]
AT4G14723.1	3.1e-21	75.47	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);...	[more]
AT3G22820.1	6.9e-21	70.18	allergen-related	[more]
AT4G37810.1	3.1e-05	34.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 124..174 e-value: 1.7E-20 score: 72.7
None	No IPR available	PANTHER	PTHR33109:SF61	BNACNNG25950D PROTEIN	coord: 117..174
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 117..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G000260.2	ClCG03G000260.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region