ClCG03G000090 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG03G000090
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr03: 143165 .. 143884 (+)
RNA-Seq Expression	ClCG03G000090
Synteny	ClCG03G000090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGCTTGTCGACAACTTTGAGTTGAATTCATTGAACAAACATGGTAGAAATGTATTTCCAAAACATATTTAGAAATGAATTTATTGAACAAACATGGTTAGAAATGACCATTTTTAAAAGCGTTTCTAAACTTTTGAAAATTCATATTTGGTATAATTTAGTCTGAAAAAAGACCCTCAGCCGCCAGCCTCTCTCTCCCATGTCCCTCTCGTTCGTCTCTCCCCAACACACACTCTCTCGATATTTCCCAGTTCCCACTCCCCGAATCAGTTCGCTCTCGCTCGTTCACACCTGCACCAGCACCGCCCTTAACCTCCGACGAACGCCACCCGTCAGCGCCCTCCGACCAAGTTTGGCGACGACAGCTCCCTCCGACCGACCAGCCGCTAGGGGTGCTTATTTTTGCACCAGTAAAACGCAGAATAAGCGGAACCCATAATCTCCGATCGCCGAGCGTGGAGAGAAGAGAGAAATCGGACCGAAAGATCGGTAGGAATCGGAAGCCATTATTAGAAATCGAATGGAAGAATTTGAAGGATTTGTAGTTGGTTATTAGTTAATTTTGTGCTATATTCAGGGCGGTTATGTAGATCGTTGCCGTGGTGGATGGAGAGGTCAAGGAACACTGGCTGTATCTCGAGCCATTGGAGACGAGCATCTGAAACAGTGGGTGATATCGGAGCCGGAGACGAGACTGATGAAGATCGAGGATAA

mRNA sequence

ATGAAGAAGCTTGTCGACAACTTTGAGTTGAATTCATTGAACAAACATGGTAGAAATTCTGAAAAAAGACCCTCAGCCGCCAGCCTCTCTCTCCCATGTCCCTCTCGTTCGTCTCTCCCCAACACACACTCTCTCGATATTTCCCAGTTCCCACTCCCCGAATCAGTTCGCTCTCGCTCGTTCACACCTGCACCAGCACCGCCCTTAACCTCCGACGAACGCCACCCGTCAGCGCCCTCCGACCAAGTTTGGCGACGACAGCTCCCTCCGACCGACCAGCCGCTAGGGGTGCTTATTTTTGCACCAGTAAAACGCAGAATAAGCGGAACCCATAATCTCCGATCGCCGAGCGTGGAGAGAAGAGAGAAATCGGACCGAAAGATCGGGCGGTTATGTAGATCGTTGCCGTGGTGGATGGAGAGGTCAAGGAACACTGGCTGTATCTCGAGCCATTGGAGACGAGCATCTGAAACAGTGGGTGATATCGGAGCCGGAGACGAGACTGATGAAGATCGAGGATAA

Coding sequence (CDS)

ATGAAGAAGCTTGTCGACAACTTTGAGTTGAATTCATTGAACAAACATGGTAGAAATTCTGAAAAAAGACCCTCAGCCGCCAGCCTCTCTCTCCCATGTCCCTCTCGTTCGTCTCTCCCCAACACACACTCTCTCGATATTTCCCAGTTCCCACTCCCCGAATCAGTTCGCTCTCGCTCGTTCACACCTGCACCAGCACCGCCCTTAACCTCCGACGAACGCCACCCGTCAGCGCCCTCCGACCAAGTTTGGCGACGACAGCTCCCTCCGACCGACCAGCCGCTAGGGGTGCTTATTTTTGCACCAGTAAAACGCAGAATAAGCGGAACCCATAATCTCCGATCGCCGAGCGTGGAGAGAAGAGAGAAATCGGACCGAAAGATCGGGCGGTTATGTAGATCGTTGCCGTGGTGGATGGAGAGGTCAAGGAACACTGGCTGTATCTCGAGCCATTGGAGACGAGCATCTGAAACAGTGGGTGATATCGGAGCCGGAGACGAGACTGATGAAGATCGAGGATAA

Protein sequence

MKKLVDNFELNSLNKHGRNSEKRPSAASLSLPCPSRSSLPNTHSLDISQFPLPESVRSRSFTPAPAPPLTSDERHPSAPSDQVWRRQLPPTDQPLGVLIFAPVKRRISGTHNLRSPSVERREKSDRKIGRLCRSLPWWMERSRNTGCISSHWRRASETVGDIGAGDETDEDRG

Homology

The following BLAST results are available for this feature:

BLAST of ClCG03G000090 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG03G000090 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG03G000090 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG03G000090 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G000090.2	ClCG03G000090.2	mRNA