ClCG02G024020 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTTATTAACAACTAAACATCACAAAACCAAAGTTTAGGGGAAATTTTAGTGATAATTCCCCGCAGAAAGACAAATCCCCGAATTTTCAGATGGGCAAAATATGAAACAATGTTAGGAAATTATGTGTAAAGCTCGAGTATAACACTGCTGGAATTGGAATGCGAAATCTGAATTGTAATGTTGGGAAATGAAGATCATGATCTGCAATTGGGTGTGATCAGATACTTTGAACACCACCACCACCACCATCATCATGTATAGCGATTAGCGAGTAAAGCAATTGGGCAAATTTATAATCAACAAATGGTCAGTGTTGGATTCTAATGGTTGGAAATCGAGACCACCGGCCGTCACTGCCTCTCTTCAGTGGGGGGAGATCGTCTTCTTCAACCTCCTTAGCATCTCCAACTTCATGGGCGTCCACAACCTCGGTTTCTGCTTCAGGCAAGAGAATTCAAAGAGAAATGACTGAGTTTAACTTGGACCCACCTTCCGATTGTTCCGCCGGCCCTAAGGGTGATAATCTTTACCACTGGTTCGCTACCATTTTTGGCCCTCCAGGTAGCTGCGACCCTTCTCTTTCTTTACTTTTTGGGGTTCATTGCTTCTCTACTCCCTAGCTTTGGCCGAGGATTTCTTGTTTGTAGACGACATATTCACTTTTCAGCTAGACTTTTATGATAAGCATCGCTTCAATTGGATATGGCCGTTAGGACTCCACTTTCCTGCTGTTTTTTACTTTTTCAAGAAGCTTTTTATCATCTTCGGTGCAAGAGTTCTCGTTCAGTGAGCTGTTACACACTCTTTCTTTGTTAGAGATTCTTAGTTCTTGGACTGGGTTTTTAGCCATCCAAAGATATGTTGCTTATCTCATTTGTTTACGACTCCTGAGCAGATGCTCTCTGAAACTTTTATGGGGTTTTATTACCTGATTGCTAAACATATTTCTTGCCTTCAACTATCAAATGTTTAGTTAAAATTCTGAAGAAAGTGATTAGGGAAGATGATGTTCGCTGTTCAGAGGAGTGTATATAATGCTCCTTCAAGTACTTGGTGTGCTATGCACCTCTGTCTCAGTGTGTTTTGTGCGAACAATAAAGATTAGTTGCCAAGCATTAGCACATAAGTTATCACGCCAAGTAAATGGCGTGAGAGTTGGAGAGAAACTACATTTAGATTAAAGTTGTCTTACCAAATACAAATTTTAGATTAAAGTTGTCGAACCCACAATCTTCCAGATGAAACTTGAGCAAGAAACTGAAGTATCATCCAAAAAACATAAGGTGCTGCCATGGAATTCGTAACAAGTTACATACTCAAACCCAATTCACATCTATATAGCCGATATCGTCCAAAAATACACAAAATGATTAGAGGAGATGCGCACTGATGGAGTTCGATTACATGACTGCTTGATACCGAAAACTCCGAAGGATTTGGAAGAATGTCCTCCAGCTAAATAGCCACACGTCACTGTTGTATACACATGCTTAAATGAATGAAATGAATGACGAGATCTGTGTCAGGATTTCATCTAGTGTTTTAGAAAATAAACATTTTTTATTAAGAGGGCTTTGTATGAATATTATCTCCAATAAATCAGGAAAACATACTGATCAATTTTATCTAAACTGATAGCTTTTCCCAACCGTATATTTGTCGTGTTTTTAGGAACCCCATATGAAGGTGGCATATTTTTCCTGGACATAATTTTCCCCAGTGATTATCCATTTAATCCTCCAAAGGTACTATTGCTTGCATCTCTAAATTTGAGGATACAAAAACTAATTTCTCTTACCCCCATCATGAGGATCAGATGATCATTCTCGACCTGATGCTACACTTTTGTGAGCATTTTACTCATGTTTATTAATAAGAATTCAGTCTGCAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTCGATTCCACTGGTAATGTAAGTTTGGACATTTTGAAGGATAACTGGAGTCCTGCGTTAACCATCGCCAAGGTGTTAATTGCAGTGAAATCAATTTTTACAAATCCCAACCCTTGTGAGTTGCCTCACTTTTTTGTACTCATTGTTTATGTCACCATAGACTTGCTTTCGTTTAGTTCACATGCTTTTCTATTTCAAGGGATTCAGTGATTGTTGGAAAGATTTTACTAAGAATAGGAACTAACTAGTGGAGGATTTGCACATAGAGAAATTGAATTAAGAGTATATACAATTCCCCATGAATATATGCTGGCTATAGAGATAGTTAATGTATTTATCAGTAAAAAGAATTCTAGTTACAATGACTGCTGGTGGGATGACTATCTTGTGAAAAAGGAATATGAAGGGCTTTGTTATTGGTACCTAACCTGAGTCCTGATGAGAGAGATGGTCCAATTTCCATGAAAATATAATGGGAATGAAGAGAAGACAGACGTTCAATGTCAATATGCTAACTTTTGTATACAACTAATTGATCTGGTTGATGGCTTGGCAACATTGAAATCTCACATTCATTTTGGATTTTACTAATTTTGCAGATGATCCAAATGCACCTGGTGTTGCTCACTTGTATTTGGCAGACAGAGCGAAACACGACGAGATAGCTGCTGAGTGGACCCTTCGTTTTGCGAAGTGATCAAGTGAATGCAACCTTAAACCACCAATGTTCATGGCATACAACTTGTTTGGATATCATTTCTGAAATTGCTTCTAATTCTCCCCCCGTTCACTTGGTAATTTACTTTGTGGTTTCGCAAGAAGTTATCAAGAACACGGGAAAGCATATTTTGAGACGAGGACGTGGAATGGAGTACAACCTGAAAGTTCTTGGATGCATGAGTGGATAGTATGAATGATTTGTAGCTTGTTCTATATTTATCAATGTTCTTTTGGAGTGTTCAAGGTGCACCAAAACATATAGCCCTTCGCAATTTTTGATGTTTATAGTAGGAAAAACGATGATTATATATACACATATACCGATGCATATTTAATAGTCTATTGGAGGTTATTGGGATGATTCAGAAGTATTCTAGCTGTTGCTGCCAATTTATTATTATTATTGATGAATTGTATTTTCAAAAGGCAGGAGCATTTTGCCAAAGGAAGTATTATTCAACTGGCATATGAATGTATTAGTCGTCACGAAGTCTGTGGTTCAAATCCTCTATCTTCAATTGTATTAGAAAAAAAGACGAGAAATTTATATTAATATGAATTATTCTTAAATGAATGAATTTTATTAATGAGTGTGTTTGGTTT TCTTTATTAACAACTAAACATCACAAAACCAAAGTTTAGGGGAAATTTTAGTGATAATTCCCCGCAGAAAGACAAATCCCCGAATTTTCAGATGGGCAAAATATGAAACAATGTTAGGAAATTATGTGTAAAGCTCGAGTATAACACTGCTGGAATTGGAATGCGAAATCTGAATTGTAATGTTGGGAAATGAAGATCATGATCTGCAATTGGGTGTGATCAGATACTTTGAACACCACCACCACCACCATCATCATGTATAGCGATTAGCGAGTAAAGCAATTGGGCAAATTTATAATCAACAAATGGTCAGTGTTGGATTCTAATGGTTGGAAATCGAGACCACCGGCCGTCACTGCCTCTCTTCAGTGGGGGGAGATCGTCTTCTTCAACCTCCTTAGCATCTCCAACTTCATGGGCGTCCACAACCTCGGTTTCTGCTTCAGGCAAGAGAATTCAAAGAGAAATGACTGAGTTTAACTTGGACCCACCTTCCGATTGTTCCGCCGGCCCTAAGGGTGATAATCTTTACCACTGGTTCGCTACCATTTTTGGCCCTCCAGACGACATATTCACTTTTCAGCTAGACTTTTATGATAAGCATCGCTTCAATTGGATATGGCCGTTAGGACTCCACTTTCCTGCTGTTTTTTACTTTTTCAAGAAGCTTTTTATCATCTTCGGTGCAAGAGTTCTCGTTCATCTGCAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTCGATTCCACTGGTAATGTAAGTTTGGACATTTTGAAGGATAACTGGAGTCCTGCGTTAACCATCGCCAAGGTGTTAATTGCAGTGAAATCAATTTTTACAAATCCCAACCCTTATGATCCAAATGCACCTGGTGTTGCTCACTTGTATTTGGCAGACAGAGCGAAACACGACGAGATAGCTGCTGAGTGGACCCTTCGTTTTGCGAAGTGATCAAGTGAATGCAACCTTAAACCACCAATGTTCATGGCATACAACTTGTTTGGATATCATTTCTGAAATTGCTTCTAATTCTCCCCCCGTTCACTTGGTAATTTACTTTGTGGTTTCGCAAGAAGTTATCAAGAACACGGGAAAGCATATTTTGAGACGAGGACGTGGAATGGAGTACAACCTGAAAGTTCTTGGATGCATGAGTGGATAGTATGAATGATTTGTAGCTTGTTCTATATTTATCAATGTTCTTTTGGAGTGTTCAAGGTGCACCAAAACATATAGCCCTTCGCAATTTTTGATGTTTATAGTAGGAAAAACGATGATTATATATACACATATACCGATGCATATTTAATAGTCTATTGGAGGTTATTGGGATGATTCAGAAGTATTCTAGCTGTTGCTGCCAATTTATTATTATTATTGATGAATTGTATTTTCAAAAGGCAGGAGCATTTTGCCAAAGGAAGTATTATTCAACTGGCATATGAATGTATTAGTCGTCACGAAGTCTGTGGTTCAAATCCTCTATCTTCAATTGTATTAGAAAAAAAGACGAGAAATTTATATTAATATGAATTATTCTTAAATGAATGAATTTTATTAATGAGTGTGTTTGGTTT ATGGTTGGAAATCGAGACCACCGGCCGTCACTGCCTCTCTTCAGTGGGGGGAGATCGTCTTCTTCAACCTCCTTAGCATCTCCAACTTCATGGGCGTCCACAACCTCGGTTTCTGCTTCAGGCAAGAGAATTCAAAGAGAAATGACTGAGTTTAACTTGGACCCACCTTCCGATTGTTCCGCCGGCCCTAAGGGTGATAATCTTTACCACTGGTTCGCTACCATTTTTGGCCCTCCAGACGACATATTCACTTTTCAGCTAGACTTTTATGATAAGCATCGCTTCAATTGGATATGGCCGTTAGGACTCCACTTTCCTGCTGTTTTTTACTTTTTCAAGAAGCTTTTTATCATCTTCGGTGCAAGAGTTCTCGTTCATCTGCAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTCGATTCCACTGGTAATGTAAGTTTGGACATTTTGAAGGATAACTGGAGTCCTGCGTTAACCATCGCCAAGGTGTTAATTGCAGTGAAATCAATTTTTACAAATCCCAACCCTTATGATCCAAATGCACCTGGTGTTGCTCACTTGTATTTGGCAGACAGAGCGAAACACGACGAGATAGCTGCTGAGTGGACCCTTCGTTTTGCGAAGTGA MVGNRDHRPSLPLFSGGRSSSSTSLASPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPPDDIFTFQLDFYDKHRFNWIWPLGLHFPAVFYFFKKLFIIFGARVLVHLQVVFKTRIYHCNVDSTGNVSLDILKDNWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK Homology
BLAST of ClCG02G024020 vs. NCBI nr
Match: XP_038902201.1 (constitutive photomorphogenesis protein 10 isoform X2 [Benincasa hispida]) HSP 1 Score: 305.8 bits (782), Expect = 2.8e-79 Identity = 159/209 (76.08%), Postives = 165/209 (78.95%), Query Frame = 0
BLAST of ClCG02G024020 vs. NCBI nr
Match: XP_022943567.1 (constitutive photomorphogenesis protein 10 [Cucurbita moschata] >XP_022986179.1 constitutive photomorphogenesis protein 10 [Cucurbita maxima] >XP_023512726.1 constitutive photomorphogenesis protein 10 isoform X1 [Cucurbita pepo subsp. pepo] >KAG7010225.1 Constitutive photomorphogenesis protein 10 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 305.4 bits (781), Expect = 3.7e-79 Identity = 159/209 (76.08%), Postives = 167/209 (79.90%), Query Frame = 0
BLAST of ClCG02G024020 vs. NCBI nr
Match: KAG6570333.1 (Constitutive photomorphogenesis protein 10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 305.4 bits (781), Expect = 3.7e-79 Identity = 159/209 (76.08%), Postives = 167/209 (79.90%), Query Frame = 0
BLAST of ClCG02G024020 vs. NCBI nr
Match: XP_038902200.1 (constitutive photomorphogenesis protein 10 isoform X1 [Benincasa hispida]) HSP 1 Score: 303.9 bits (777), Expect = 1.1e-78 Identity = 158/208 (75.96%), Postives = 164/208 (78.85%), Query Frame = 0
BLAST of ClCG02G024020 vs. NCBI nr
Match: XP_004142171.1 (constitutive photomorphogenesis protein 10 [Cucumis sativus] >KGN54065.1 hypothetical protein Csa_018040 [Cucumis sativus]) HSP 1 Score: 299.3 bits (765), Expect = 2.6e-77 Identity = 157/209 (75.12%), Postives = 164/209 (78.47%), Query Frame = 0
BLAST of ClCG02G024020 vs. ExPASy Swiss-Prot
Match: Q9LJD7 (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana OX=3702 GN=COP10 PE=1 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 1.8e-49 Identity = 100/181 (55.25%), Postives = 121/181 (66.85%), Query Frame = 0
BLAST of ClCG02G024020 vs. ExPASy Swiss-Prot
Match: Q2T9X7 (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus OX=9913 GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.1e-37 Identity = 85/194 (43.81%), Postives = 116/194 (59.79%), Query Frame = 0
BLAST of ClCG02G024020 vs. ExPASy Swiss-Prot
Match: Q969T4 (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens OX=9606 GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.1e-37 Identity = 85/194 (43.81%), Postives = 116/194 (59.79%), Query Frame = 0
BLAST of ClCG02G024020 vs. ExPASy Swiss-Prot
Match: P52483 (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus OX=10090 GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 157.1 bits (396), Expect = 2.1e-37 Identity = 85/194 (43.81%), Postives = 116/194 (59.79%), Query Frame = 0
BLAST of ClCG02G024020 vs. ExPASy Swiss-Prot
Match: P52485 (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster OX=7227 GN=Ubc2 PE=2 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 8.0e-37 Identity = 90/211 (42.65%), Postives = 118/211 (55.92%), Query Frame = 0
BLAST of ClCG02G024020 vs. ExPASy TrEMBL
Match: A0A6J1JFC7 (constitutive photomorphogenesis protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111483999 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 1.8e-79 Identity = 159/209 (76.08%), Postives = 167/209 (79.90%), Query Frame = 0
BLAST of ClCG02G024020 vs. ExPASy TrEMBL
Match: A0A6J1FTD1 (constitutive photomorphogenesis protein 10 OS=Cucurbita moschata OX=3662 GN=LOC111448300 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 1.8e-79 Identity = 159/209 (76.08%), Postives = 167/209 (79.90%), Query Frame = 0
BLAST of ClCG02G024020 vs. ExPASy TrEMBL
Match: A0A0A0KWU2 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G280420 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 1.3e-77 Identity = 157/209 (75.12%), Postives = 164/209 (78.47%), Query Frame = 0
BLAST of ClCG02G024020 vs. ExPASy TrEMBL
Match: A0A5D3DDP3 (Constitutive photomorphogenesis protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00610 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 8.2e-77 Identity = 156/209 (74.64%), Postives = 163/209 (77.99%), Query Frame = 0
BLAST of ClCG02G024020 vs. ExPASy TrEMBL
Match: A0A1S3BMW7 (constitutive photomorphogenesis protein 10 OS=Cucumis melo OX=3656 GN=LOC103491591 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 8.2e-77 Identity = 156/209 (74.64%), Postives = 163/209 (77.99%), Query Frame = 0
BLAST of ClCG02G024020 vs. TAIR 10
Match: AT3G13550.1 (Ubiquitin-conjugating enzyme family protein ) HSP 1 Score: 197.2 bits (500), Expect = 1.3e-50 Identity = 100/181 (55.25%), Postives = 121/181 (66.85%), Query Frame = 0
BLAST of ClCG02G024020 vs. TAIR 10
Match: AT3G13550.2 (Ubiquitin-conjugating enzyme family protein ) HSP 1 Score: 149.4 bits (376), Expect = 3.1e-36 Identity = 78/149 (52.35%), Postives = 97/149 (65.10%), Query Frame = 0
BLAST of ClCG02G024020 vs. TAIR 10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11 ) HSP 1 Score: 144.4 bits (363), Expect = 1.0e-34 Identity = 67/169 (39.64%), Postives = 104/169 (61.54%), Query Frame = 0
BLAST of ClCG02G024020 vs. TAIR 10
Match: AT3G08690.2 (ubiquitin-conjugating enzyme 11 ) HSP 1 Score: 144.4 bits (363), Expect = 1.0e-34 Identity = 67/169 (39.64%), Postives = 104/169 (61.54%), Query Frame = 0
BLAST of ClCG02G024020 vs. TAIR 10
Match: AT2G16740.1 (ubiquitin-conjugating enzyme 29 ) HSP 1 Score: 143.3 bits (360), Expect = 2.2e-34 Identity = 66/167 (39.52%), Postives = 103/167 (61.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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