ClCG02G023100 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G023100
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr02: 37518798 .. 37519687 (+)
RNA-Seq Expression	ClCG02G023100
Synteny	ClCG02G023100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCAAGCAGTTCAAAAATTGACCCATCAGGTTTGTTTTATTTTTTCTTTGGAGTATCATCGTGGCTTATTTGGTAGGGAATTCGAAAACAAAGATTTCAATAAAAATATAATTGTGTTTCGTGTTTTCAAATATGTGTTAAGTAGCAAATTCAGAATTTAGATTCTAATTTAGACAATTGTCTTAAATGTGTTTGATACTATATTTATAAACCATAAAACTAATTGTAGTTACCAAATAAATATTAGATTGACTATAAATTATTTTTAATTAATTTATGAACATGCTTTATGTTATTTTCTTTTTTTATAATATTATATAATTGATAATACATTACAAAATACATATTTTATTAATAATTGAGTTTATAACTTGAGATAATGTAATTTAGTGGTTTTTTTTAATCTCCATTTAATATAATTGTGCAATTTAAAATTTAAAAATCAAAATCTAAACACGCTCAAAACATAAAAATATCGTTTTCAAAATTTGCATTGTTTATGTCACAGAATCTAAGAAACGTTTTCAGAAACAAAATCCAAATGGTATGTCAAACACATATTTGTTGAACTCATTAAATTTGAAAACATAAAACATGATTCGAATTTTCAACCAAACAGACACTAAGCTTTACAAATTTGTTTATATAGAGTTCGAGCCTACGATTTCAGAGTTGAAAGCTCTGCAAAGCGAGCTCGAGGAAAAGAGGAAAAAGATGGAGGAGATGAAGGAAGAGATTGAAATTACAAAAGTTTGTCTGGAGAAGAAGAAGGAGAAGAAAATTTCAAAGAAAGAAATGGAAGATTTTAAAGGGTTGTGTGAACAATACAACAGCTGGAGAAAGGAATACAATGAAACATTGGAGAAACAGACAAGGGAATCCTAG

mRNA sequence

ATGGATCCAAGCAGTTCAAAAATTGACCCATCAGAATCTAAGAAACGTTTTCAGAAACAAAATCCAAATGAGTTCGAGCCTACGATTTCAGAGTTGAAAGCTCTGCAAAGCGAGCTCGAGGAAAAGAGGAAAAAGATGGAGGAGATGAAGGAAGAGATTGAAATTACAAAAGTTTGTCTGGAGAAGAAGAAGGAGAAGAAAATTTCAAAGAAAGAAATGGAAGATTTTAAAGGGTTGTGTGAACAATACAACAGCTGGAGAAAGGAATACAATGAAACATTGGAGAAACAGACAAGGGAATCCTAG

Coding sequence (CDS)

ATGGATCCAAGCAGTTCAAAAATTGACCCATCAGAATCTAAGAAACGTTTTCAGAAACAAAATCCAAATGAGTTCGAGCCTACGATTTCAGAGTTGAAAGCTCTGCAAAGCGAGCTCGAGGAAAAGAGGAAAAAGATGGAGGAGATGAAGGAAGAGATTGAAATTACAAAAGTTTGTCTGGAGAAGAAGAAGGAGAAGAAAATTTCAAAGAAAGAAATGGAAGATTTTAAAGGGTTGTGTGAACAATACAACAGCTGGAGAAAGGAATACAATGAAACATTGGAGAAACAGACAAGGGAATCCTAG

Protein sequence

MDPSSSKIDPSESKKRFQKQNPNEFEPTISELKALQSELEEKRKKMEEMKEEIEITKVCLEKKKEKKISKKEMEDFKGLCEQYNSWRKEYNETLEKQTRES

Homology

[Close]

BLAST of ClCG02G023100 vs. NCBI nr
Match: KGN48117.1 (hypothetical protein Csa_003321 [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 2.8e-16
Identity = 64/102 (62.75%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 1   MDPSSSKIDPSESKKRFQKQNPNEFEPTISELKALQSELEEKRKKMEEMKEEIEITKVCL 60
           MDPS+SKIDPS            EFE   SELK L+ ELEEK KKMEEMK++IE  KVCL
Sbjct: 1   MDPSNSKIDPS------------EFEAVPSELKTLERELEEKMKKMEEMKKKIEGKKVCL 60

Query: 61  EKKKE-KKISKKEMEDFKGLCEQYNSWRKEYNETLEKQTRES 102
           EKKK+  K S+KEME FKGLC +Y S RKEYNE  EK+ RES
Sbjct: 61  EKKKDGVKFSRKEMEVFKGLCGKYKSLRKEYNEAWEKERRES 90

[Close]

BLAST of ClCG02G023100 vs. NCBI nr
Match: KAG7035874.1 (hypothetical protein SDJN02_02673, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 85.1 bits (209), Expect = 3.7e-13
Identity = 58/101 (57.43%), Postives = 69/101 (68.32%), Query Frame = 0


Query: 1   MDPSSSKIDPSESKKRFQKQNPNEFEPTISELKALQSELEEKRKKMEEMKEEIEITKVCL 60
           MDPSSSKIDPS            EF+P   EL+ LQ E+E K KK++EMK+EIE  K+ L
Sbjct: 1   MDPSSSKIDPS------------EFKPVGLELEVLQKEVEAKTKKIKEMKKEIEAIKMWL 60

Query: 61  EKKKEKKISKKEMEDFKGLCEQYNSWRKEYNETLEKQTRES 102
           E   EKK S++EME  K LCE++NS RKEY ETL KQTRES
Sbjct: 61  E---EKKASREEMESLKRLCEEFNSLRKEYYETLGKQTRES 86

[Close]

BLAST of ClCG02G023100 vs. NCBI nr
Match: XP_022958532.1 (uncharacterized protein LOC111459736 [Cucurbita moschata])

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-10
Identity = 49/78 (62.82%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 24  EFEPTISELKALQSELEEKRKKMEEMKEEIEITKVCLEKKKEKKISKKEMEDFKGLCEQY 83
           EF+P  SEL+ LQ E+E K KK++EMK+EIE  K+ LE   EKK S++EME  K LCE+Y
Sbjct: 163 EFKPAGSELEVLQKEVEAKTKKIKEMKKEIEGIKMWLE---EKKASREEMESLKRLCEEY 222

Query: 84  NSWRKEYNETLEKQTRES 102
           NS RKEY ETL KQTRES
Sbjct: 223 NSLRKEYYETLGKQTRES 237

[Close]

BLAST of ClCG02G023100 vs. NCBI nr
Match: TKY67809.1 (hypothetical protein E2542_SST10705 [Spatholobus suberectus])

HSP 1 Score: 58.5 bits (140), Expect = 3.8e-05
Identity = 38/74 (51.35%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 28  TISELKALQSELEEKRKKMEEMKEEIEITKVCLEKKKEKKISKKEMEDFKGLCEQYNSWR 87
           T SEL+ALQ E EEK  K++E+K +IE+TK  LEKKK K++++++M  F  L ++YNS R
Sbjct: 108 TASELEALQKEHEEKNLKIQELKRQIELTKHLLEKKK-KEVTEEQMGGFNTLSKKYNSLR 167

Query: 88  KEYNETLEKQTRES 102
           +EYN  L ++ RES
Sbjct: 168 EEYNAMLAEKLRES 180

[Close]

BLAST of ClCG02G023100 vs. NCBI nr
Match: KYP68052.1 (hypothetical protein KK1_021669 [Cajanus cajan])

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-04
Identity = 37/74 (50.00%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 28  TISELKALQSELEEKRKKMEEMKEEIEITKVCLEKKKEKKISKKEMEDFKGLCEQYNSWR 87
           T SEL+ LQ E EEK  K++E+K++IE+TK  LEKKK K++++++M  F  L ++YNS R
Sbjct: 31  TASELEVLQKEHEEKNMKIQELKKQIELTKHRLEKKK-KELTEEQMGGFNTLSKKYNSLR 90

Query: 88  KEYNETLEKQTRES 102
           +EYN  L ++ RES
Sbjct: 91  EEYNAMLAEKLRES 103

[Close]

BLAST of ClCG02G023100 vs. ExPASy TrEMBL
Match: A0A0A0KIA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434370 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.3e-16
Identity = 64/102 (62.75%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 1   MDPSSSKIDPSESKKRFQKQNPNEFEPTISELKALQSELEEKRKKMEEMKEEIEITKVCL 60
           MDPS+SKIDPS            EFE   SELK L+ ELEEK KKMEEMK++IE  KVCL
Sbjct: 1   MDPSNSKIDPS------------EFEAVPSELKTLERELEEKMKKMEEMKKKIEGKKVCL 60

Query: 61  EKKKE-KKISKKEMEDFKGLCEQYNSWRKEYNETLEKQTRES 102
           EKKK+  K S+KEME FKGLC +Y S RKEYNE  EK+ RES
Sbjct: 61  EKKKDGVKFSRKEMEVFKGLCGKYKSLRKEYNEAWEKERRES 90

[Close]

BLAST of ClCG02G023100 vs. ExPASy TrEMBL
Match: A0A6J1H234 (uncharacterized protein LOC111459736 OS=Cucurbita moschata OX=3662 GN=LOC111459736 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.5e-11
Identity = 49/78 (62.82%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 24  EFEPTISELKALQSELEEKRKKMEEMKEEIEITKVCLEKKKEKKISKKEMEDFKGLCEQY 83
           EF+P  SEL+ LQ E+E K KK++EMK+EIE  K+ LE   EKK S++EME  K LCE+Y
Sbjct: 163 EFKPAGSELEVLQKEVEAKTKKIKEMKKEIEGIKMWLE---EKKASREEMESLKRLCEEY 222

Query: 84  NSWRKEYNETLEKQTRES 102
           NS RKEY ETL KQTRES
Sbjct: 223 NSLRKEYYETLGKQTRES 237

[Close]

BLAST of ClCG02G023100 vs. ExPASy TrEMBL
Match: A0A151TLW3 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_021669 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.9e-05
Identity = 37/74 (50.00%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 28  TISELKALQSELEEKRKKMEEMKEEIEITKVCLEKKKEKKISKKEMEDFKGLCEQYNSWR 87
           T SEL+ LQ E EEK  K++E+K++IE+TK  LEKKK K++++++M  F  L ++YNS R
Sbjct: 31  TASELEVLQKEHEEKNMKIQELKKQIELTKHRLEKKK-KELTEEQMGGFNTLSKKYNSLR 90

Query: 88  KEYNETLEKQTRES 102
           +EYN  L ++ RES
Sbjct: 91  EEYNAMLAEKLRES 103

[Close]

BLAST of ClCG02G023100 vs. ExPASy TrEMBL
Match: A0A0B2QGG7 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_033128 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 9.0e-05
Identity = 38/74 (51.35%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 28  TISELKALQSELEEKRKKMEEMKEEIEITKVCLEKKKEKKISKKEMEDFKGLCEQYNSWR 87
           T SEL+ALQ E EEK  K++E+K +IE+TK  LEKKK K++++++M  F  L  +YNS R
Sbjct: 17  TESELEALQREHEEKNLKIQELKRQIELTKNRLEKKK-KEVTEEQMGGFNTLSNKYNSLR 76

Query: 88  KEYNETLEKQTRES 102
           +EYN  L ++ RES
Sbjct: 77  EEYNAMLAEKLRES 89

[Close]

BLAST of ClCG02G023100 vs. ExPASy TrEMBL
Match: I1LPC8 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_12G021200 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 9.0e-05
Identity = 38/74 (51.35%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 28  TISELKALQSELEEKRKKMEEMKEEIEITKVCLEKKKEKKISKKEMEDFKGLCEQYNSWR 87
           T SEL+ALQ E EEK  K++E+K +IE+TK  LEKKK K++++++M  F  L  +YNS R
Sbjct: 17  TESELEALQREHEEKNLKIQELKRQIELTKNRLEKKK-KEVTEEQMGGFNTLSNKYNSLR 76

Query: 88  KEYNETLEKQTRES 102
           +EYN  L ++ RES
Sbjct: 77  EEYNAMLAEKLRES 89

The following BLAST results are available for this feature:

BLAST of ClCG02G023100 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN48117.1	2.8e-16	62.75	hypothetical protein Csa_003321 [Cucumis sativus]	[more]
KAG7035874.1	3.7e-13	57.43	hypothetical protein SDJN02_02673, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022958532.1	1.3e-10	62.82	uncharacterized protein LOC111459736 [Cucurbita moschata]	[more]
TKY67809.1	3.8e-05	51.35	hypothetical protein E2542_SST10705 [Spatholobus suberectus]	[more]
KYP68052.1	1.4e-04	50.00	hypothetical protein KK1_021669 [Cajanus cajan]	[more]

BLAST of ClCG02G023100 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG02G023100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIA6	1.3e-16	62.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434370 PE=4 SV=1	[more]
A0A6J1H234	6.5e-11	62.82	uncharacterized protein LOC111459736 OS=Cucurbita moschata OX=3662 GN=LOC1114597...	[more]
A0A151TLW3	6.9e-05	50.00	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_021669 PE=4 SV=1	[more]
A0A0B2QGG7	9.0e-05	51.35	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_033128 PE=4 SV=1	[more]
I1LPC8	9.0e-05	51.35	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_12G021200 PE=4 SV=1	[more]

BLAST of ClCG02G023100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 29..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G023100.2	ClCG02G023100.2	mRNA