ClCG02G022335 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG02G022335
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionDUF538 domain-containing protein
LocationCG_Chr02: 36756143 .. 36756376 (-)
RNA-Seq ExpressionClCG02G022335
SyntenyClCG02G022335
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCTTACAACAACAAAATCAAGGGAAATTTGAGGTATGGGTGTGTGAAGGATTTTTATGGGATTCAAGTGAAGAAGATGTTCTTTTGGGTCCTTATTACTGGAATCAAAGCTAAAGAGGGCTCTAGAACCATCGATTTTTATGTTAGGTTTTTGTATGAGACCTTGCCGGAGAAGATGAAGATGGAATTGAAAAGAAAGAGAGGATGGAAAGGGAAACGCCATTATTAA

mRNA sequence

ATGGCAGCTTACAACAACAAAATCAAGGGAAATTTGAGGTATGGGTGTGTGAAGGATTTTTATGGGATTCAAGTGAAGAAGATGTTCTTTTGGGTCCTTATTACTGGAATCAAAGCTAAAGAGGGCTCTAGAACCATCGATTTTTATGTTAGGTTTTTGTATGAGACCTTGCCGGAGAAGATGAAGATGGAATTGAAAAGAAAGAGAGGATGGAAAGGGAAACGCCATTATTAA

Coding sequence (CDS)

ATGGCAGCTTACAACAACAAAATCAAGGGAAATTTGAGGTATGGGTGTGTGAAGGATTTTTATGGGATTCAAGTGAAGAAGATGTTCTTTTGGGTCCTTATTACTGGAATCAAAGCTAAAGAGGGCTCTAGAACCATCGATTTTTATGTTAGGTTTTTGTATGAGACCTTGCCGGAGAAGATGAAGATGGAATTGAAAAGAAAGAGAGGATGGAAAGGGAAACGCCATTATTAA

Protein sequence

MAAYNNKIKGNLRYGCVKDFYGIQVKKMFFWVLITGIKAKEGSRTIDFYVRFLYETLPEKMKMELKRKRGWKGKRHY
Homology
BLAST of ClCG02G022335 vs. NCBI nr
Match: XP_022933750.1 (uncharacterized protein LOC111441073 [Cucurbita moschata])

HSP 1 Score: 73.9 bits (180), Expect = 6.6e-10
Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 0

Query: 4   YNNKIKGNLRYGCVKDFYGIQVKKMFFWVLITGIKAKEGSRTIDFYVRFLYETLPEK--M 63
           Y+  +KG LRYG V D  GIQ KK+F WV +TGIKA +GS TIDFYV  L ETLP +   
Sbjct: 83  YDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQGSGTIDFYVGVLSETLPAQQFQ 142

Query: 64  KMELKRKRGWKGKR 76
           K+    + G  G+R
Sbjct: 143 KIPACTREGCVGER 156

BLAST of ClCG02G022335 vs. NCBI nr
Match: KAG7022156.1 (hypothetical protein SDJN02_15885, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 73.9 bits (180), Expect = 6.6e-10
Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 0

Query: 4   YNNKIKGNLRYGCVKDFYGIQVKKMFFWVLITGIKAKEGSRTIDFYVRFLYETLPEK--M 63
           Y+  +KG LRYG V D  GIQ KK+F WV +TGIKA +GS TIDFYV  L ETLP +   
Sbjct: 83  YDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQGSGTIDFYVGVLSETLPAQQFQ 142

Query: 64  KMELKRKRGWKGKR 76
           K+    + G  G+R
Sbjct: 143 KIPACTREGCVGER 156

BLAST of ClCG02G022335 vs. NCBI nr
Match: KAG6588240.1 (hypothetical protein SDJN03_16805, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 73.2 bits (178), Expect = 1.1e-09
Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = 0

Query: 4   YNNKIKGNLRYGCVKDFYGIQVKKMFFWVLITGIKAKEGSRTIDFYVRFLYETLPEKMKM 63
           Y+  +KG LRYG V D  GIQ KK+F WV +TGIKA +GS TIDFYV  L ETLP +   
Sbjct: 83  YDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQGSGTIDFYVGVLSETLPAQQFQ 142

Query: 64  ELK--RKRGWKGKR 76
           ++    + G  G+R
Sbjct: 143 KIPGCTREGCVGER 156

BLAST of ClCG02G022335 vs. NCBI nr
Match: XP_023531629.1 (uncharacterized protein LOC111793813 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 72.4 bits (176), Expect = 1.9e-09
Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = 0

Query: 4   YNNKIKGNLRYGCVKDFYGIQVKKMFFWVLITGIKAKEGSRTIDFYVRFLYETLP 59
           Y+  +KG LRYG V D  GI+ KK+F WV +TGI+A +GS TIDFYV  L ETLP
Sbjct: 83  YDKIVKGKLRYGSVADVSGIEAKKLFLWVSVTGIEANQGSGTIDFYVGVLSETLP 137

BLAST of ClCG02G022335 vs. NCBI nr
Match: XP_023006181.1 (uncharacterized protein LOC111498989 [Cucurbita maxima])

HSP 1 Score: 70.9 bits (172), Expect = 5.6e-09
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 0

Query: 4   YNNKIKGNLRYGCVKDFYGIQVKKMFFWVLITGIKAKEGSRTIDFYVRFLYETLP 59
           Y   +KG L YG V D  GIQ KK+F WV +TGI+A +GS TIDFYV  L ETLP
Sbjct: 83  YEKIVKGKLSYGSVADVSGIQAKKLFLWVSVTGIEANQGSGTIDFYVGVLSETLP 137

BLAST of ClCG02G022335 vs. ExPASy TrEMBL
Match: A0A6J1F5P9 (uncharacterized protein LOC111441073 OS=Cucurbita moschata OX=3662 GN=LOC111441073 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.2e-10
Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 0

Query: 4   YNNKIKGNLRYGCVKDFYGIQVKKMFFWVLITGIKAKEGSRTIDFYVRFLYETLPEK--M 63
           Y+  +KG LRYG V D  GIQ KK+F WV +TGIKA +GS TIDFYV  L ETLP +   
Sbjct: 83  YDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQGSGTIDFYVGVLSETLPAQQFQ 142

Query: 64  KMELKRKRGWKGKR 76
           K+    + G  G+R
Sbjct: 143 KIPACTREGCVGER 156

BLAST of ClCG02G022335 vs. ExPASy TrEMBL
Match: A0A6J1KX25 (uncharacterized protein LOC111498989 OS=Cucurbita maxima OX=3661 GN=LOC111498989 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.7e-09
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 0

Query: 4   YNNKIKGNLRYGCVKDFYGIQVKKMFFWVLITGIKAKEGSRTIDFYVRFLYETLP 59
           Y   +KG L YG V D  GIQ KK+F WV +TGI+A +GS TIDFYV  L ETLP
Sbjct: 83  YEKIVKGKLSYGSVADVSGIQAKKLFLWVSVTGIEANQGSGTIDFYVGVLSETLP 137

BLAST of ClCG02G022335 vs. ExPASy TrEMBL
Match: A0A1Q3CM30 (DUF538 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_24774 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.6e-09
Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = 0

Query: 4   YNNKIKGNLRYGCVKDFYGIQVKKMFFWVLITGIKAKEGSRTIDFYVRFLYETLPEK 61
           Y+ KIKG L YG V D  GIQ KK+F WV +TGI A++ S TIDFYV  L E+LP K
Sbjct: 93  YDKKIKGQLSYGSVHDVSGIQAKKLFLWVSVTGIVAEKDSGTIDFYVGALSESLPAK 149

BLAST of ClCG02G022335 vs. ExPASy TrEMBL
Match: A0A6J1DIG2 (uncharacterized protein LOC111020803 OS=Momordica charantia OX=3673 GN=LOC111020803 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.0e-08
Identity = 33/54 (61.11%), Postives = 37/54 (68.52%), Query Frame = 0

Query: 4   YNNKIKGNLRYGCVKDFYGIQVKKMFFWVLITGIKAKEGSRTIDFYVRFLYETL 58
           Y+ KIKG L YG V D  GIQ KK+F WV +TGIKA     TIDF+V FL ETL
Sbjct: 95  YDKKIKGKLSYGSVVDASGIQAKKLFLWVSVTGIKANPAEGTIDFFVGFLSETL 148

BLAST of ClCG02G022335 vs. ExPASy TrEMBL
Match: M5W1G2 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G009400 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-08
Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 0

Query: 4   YNNKIKGNLRYGCVKDFYGIQVKKMFFWVLITGIKAKEGSRTIDFYVRFLYETLPEK 61
           YN  IKG L YG V D  GIQ KK+F WV +TGI+  +GS +++FYV  L E LP K
Sbjct: 94  YNKNIKGKLSYGSVSDVSGIQAKKLFIWVSVTGIQVDQGSDSVEFYVGALSEKLPAK 150

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022933750.16.6e-1052.70uncharacterized protein LOC111441073 [Cucurbita moschata][more]
KAG7022156.16.6e-1052.70hypothetical protein SDJN02_15885, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6588240.11.1e-0951.35hypothetical protein SDJN03_16805, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023531629.11.9e-0960.00uncharacterized protein LOC111793813 [Cucurbita pepo subsp. pepo][more]
XP_023006181.15.6e-0960.00uncharacterized protein LOC111498989 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1F5P93.2e-1052.70uncharacterized protein LOC111441073 OS=Cucurbita moschata OX=3662 GN=LOC1114410... [more]
A0A6J1KX252.7e-0960.00uncharacterized protein LOC111498989 OS=Cucurbita maxima OX=3661 GN=LOC111498989... [more]
A0A1Q3CM304.6e-0959.65DUF538 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_2... [more]
A0A6J1DIG21.0e-0861.11uncharacterized protein LOC111020803 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
M5W1G21.8e-0854.39Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G009400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036758At5g01610-like superfamilyGENE3D2.30.240.10coord: 1..68
e-value: 2.3E-8
score: 35.8
IPR036758At5g01610-like superfamilySUPERFAMILY141562At5g01610-likecoord: 3..63
IPR007493Protein of unknown function DUF538PFAMPF04398DUF538coord: 3..58
e-value: 9.2E-10
score: 39.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G022335.1ClCG02G022335.1mRNA