ClCG02G020570 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G020570
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	zinc finger protein CONSTANS-LIKE 1 isoform X1
Location	CG_Chr02: 35047250 .. 35050073 (+)
RNA-Seq Expression	ClCG02G020570
Synteny	ClCG02G020570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACCTTCCTCTTCCCTTCCTCTCAACCGCCTTCTGATCGGATCCTTTCTTATTCCTCACGCGCCGCCGTCCCTCTCATGGCCTTTTCCCCATTTCTCTCCGCCGCCTCACATTCCTCCGCCGACCTCGCAGGCGTTGATTTTGACTGGTTGCCCGATTCTTCCATCAAGCTTTGGAACTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGACTTCTCCGCCGCAACCCCTAACAATCCGTCCATCAACTAACAATTTTTCATTACACCAATCTTTCCCCCTCCTTAATCCTTCTCTCCAATCCAATGATTTATTTCTTCAACGCACCTTCTCTTCCTCCTCGCCTCCGCCCTCCACCGCCACCGTCGATACTCTCGTCAACCGCCCGCTCTTCCCCGCCGGCGATTTTCAGGTGTGGCTTATGAAAATTATTATTTAAAAAATATGTGAGAAGAAAGAAAAAAAATTAGTCAATGTGACTATTATTCTCACCACAAAAAAATTATTCGGTGAAATAAATACAATGGAGTGGAACTAAAATTCATAGCTTCGTTAGCAACTGCAAATATAGCGATCAAACTCAAAATATTAGTGGATGAAACAAAATTTAGATCCAACTCCTTAAGTATATTAGTAAACTAGAAGTTTATCGTTTTAATAATAGATTTTACTATATTTGTAATTCTTTAAAAATATTATTATACACTTAATTATTAACTAAAGTTCGTTACAATTATCTATCAAACATTCGAAGAAAAGTAATTACAATGGGATGATTATATTGAATAAATTTTCATTCAATACAGATTTAAATCCATTGCACTCTACCAAGAGGGCAGTCACAATGAATGTAACAATCAAATCAAATATATCTTTTTTTTCTTTTGTGTATAATTAAGTTAAAAATATTTCTATATTTCAGTCTCTTGAATAATTTATCCAATTAATGGAAGGTACTTACAATCATGGTCAATTTCCATGGGAAGGATCATTAAAAAAAATTGGCTTTTCATGAATCCAAAGAGTTTGTTTTATTATTCTTTTATTGAAGAGGGTCTTGGGTATAATATTTAAATGAAAATGGGATTAAAAGGAGCATATAAGATAATATTATATAGAGTGGATTTTGAATATTTATTAATGACTTTGGAAAATGGTGAATGGCAGAAGAATAATCAAAGAGCAGAGAGTCCAGTTTCATGTGAAAGTAGCATCACCATTGAAGGAATGAGCAGAGCATGTAGGTACAGCCCAGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAATCAGAGGAACTTCAACAAGAAGATTAAGGTTACATTTTTTCTTTTTCTTTTTCTTTTTTAATTTCTTTCTTATATTCTTCTTTATCTATTCTACTTGAAATTATAATGGATTAATTCTATAGAATAAATAATTTCACCTCTTATTCTACCTACACATTATTTCATAGATTCTAGATGCCAACAACTATCAAGTAATATTGTTGTATTTTTATATTATTGTCATCATATAACTTTCCAATTATGAATTATAATATATATATTTCATGTTTAATTATAAATTTGGTCTCTATAATTTGAAAAAAAAAATTAAAAATTAAGTCTCTATGAACTTAGTACTTTTGATTCCATAAAAATAGTTTATATGGTTTAGTGAAATTCTTATACATAGTTTCCAATTAAGAAGACTTTATCAAATCATAATTATTAAATTCTAACTTTCTTCTAATTTAGGTATAAACTTTGGTTTTAAACTTATGAATTATAATAATTCAAATTATATAACTAATTTATTATGTAGTTGTATGTTATTTCAATTTCACCTTGATCTTTTTGTTTTTGTCACATCTAACTTATGAGAAACTCCAAAGTACTCCTTTTATTCTCTCTTTCTCATTTTAAAGGTTGAAAGGTCATTTCAATATTTAAAAGAGGGTAAGAATGGAAAAGACAGATTTTAAAACCATCCCAAAATTTGTCCAAAAGCCAATTAAACAACATTGATTTCATTCAATAAAAAATGATAAGACAATCAATCCTCTTCACATCTTCTCATAGATGTGATATAATAATATTGCTTGAGATACTATTAAATTCTAATTAAGTAAATGAATCTTTTTTTTTTTTTTTTTTTTTTGTAGGTTATACTCACTAATATTATTTGGGTGTGGTTAAAGTATGCTTGTAGGAAGTCATTGGCGGATAGTCGACCACGGATCAGAGGACGATTTGCGAGATACAACGACGACATAGTGAAGAATTATCCAATGCAATGGAGTGAAGGGCGAGAAGAGGAAGAAGAACAACAAGTAGAAAATAATTGTGGTGATAATTGGATCAAGTATTTCATTGATGCATATTCCACGAACCTTATTCCATGAATCTCACACCATAACAACAACAACTAATAATGTAGTTCCTAGTCTAGTTGCATTCGGCCTCTTCCATTTTGACCTGCCTTTCAATTGCGTGAGAATGTCATATTTACTTATTTTAGCTTCCTTTCTCTTTTTCCCTTTCTTTTTTCCTTCACATGTATGGAAAATTTCTAAGTCTATATAAAATATATTTGTAATAATAATGATGAAGAAAACGTTGTTATTGGGTTGTGAATATGAGGGGCGTTTAAAAAAAAAAAGGTTAAAATATCATTTTGGTCTCTATATTTTATAATTTGTTCAATCTTAGTCACCAGCTTTCGAATATCCAATTTTGGTTCTTGTACTTTTAATTAATCTTAAATTTAGTTTTTTGAAGTTAATTTTTATAGAAATTAATTAAATAAAAATAATAATTTCTATGTAAG

mRNA sequence

CGACCTTCCTCTTCCCTTCCTCTCAACCGCCTTCTGATCGGATCCTTTCTTATTCCTCACGCGCCGCCGTCCCTCTCATGGCCTTTTCCCCATTTCTCTCCGCCGCCTCACATTCCTCCGCCGACCTCGCAGGCGTTGATTTTGACTGGTTGCCCGATTCTTCCATCAAGCTTTGGAACTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGACTTCTCCGCCGCAACCCCTAACAATCCGTCCATCAACTAACAATTTTTCATTACACCAATCTTTCCCCCTCCTTAATCCTTCTCTCCAATCCAATGATTTATTTCTTCAACGCACCTTCTCTTCCTCCTCGCCTCCGCCCTCCACCGCCACCGTCGATACTCTCGTCAACCGCCCGCTCTTCCCCGCCGGCGATTTTCAGAAGAATAATCAAAGAGCAGAGAGTCCAGTTTCATGTGAAAGTAGCATCACCATTGAAGGAATGAGCAGAGCATGTAGGTACAGCCCAGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAATCAGAGGAACTTCAACAAGAAGATTAAGGTTATACTCACTAATATTATTTGGGTGTGGTTAAAGTATGCTTGTAGGAAGTCATTGGCGGATAGTCGACCACGGATCAGAGGACGATTTGCGAGATACAACGACGACATAGTGAAGAATTATCCAATGCAATGGAGTGAAGGGCGAGAAGAGGAAGAAGAACAACAAGTAGAAAATAATTGTGGTGATAATTGGATCAAGTATTTCATTGATGCATATTCCACGAACCTTATTCCATGAATCTCACACCATAACAACAACAACTAATAATGTAGTTCCTAGTCTAGTTGCATTCGGCCTCTTCCATTTTGACCTGCCTTTCAATTGCGTGAGAATGTCATATTTACTTATTTTAGCTTCCTTTCTCTTTTTCCCTTTCTTTTTTCCTTCACATGTATGGAAAATTTCTAAGTCTATATAAAATATATTTGTAATAATAATGATGAAGAAAACGTTGTTATTGGGTTGTGAATATGAGGGGCGTTTAAAAAAAAAAAGGTTAAAATATCATTTTGGTCTCTATATTTTATAATTTGTTCAATCTTAGTCACCAGCTTTCGAATATCCAATTTTGGTTCTTGTACTTTTAATTAATCTTAAATTTAGTTTTTTGAAGTTAATTTTTATAGAAATTAATTAAATAAAAATAATAATTTCTATGTAAG

Coding sequence (CDS)

ATGGCCTTTTCCCCATTTCTCTCCGCCGCCTCACATTCCTCCGCCGACCTCGCAGGCGTTGATTTTGACTGGTTGCCCGATTCTTCCATCAAGCTTTGGAACTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGACTTCTCCGCCGCAACCCCTAACAATCCGTCCATCAACTAACAATTTTTCATTACACCAATCTTTCCCCCTCCTTAATCCTTCTCTCCAATCCAATGATTTATTTCTTCAACGCACCTTCTCTTCCTCCTCGCCTCCGCCCTCCACCGCCACCGTCGATACTCTCGTCAACCGCCCGCTCTTCCCCGCCGGCGATTTTCAGAAGAATAATCAAAGAGCAGAGAGTCCAGTTTCATGTGAAAGTAGCATCACCATTGAAGGAATGAGCAGAGCATGTAGGTACAGCCCAGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAATCAGAGGAACTTCAACAAGAAGATTAAGGTTATACTCACTAATATTATTTGGGTGTGGTTAAAGTATGCTTGTAGGAAGTCATTGGCGGATAGTCGACCACGGATCAGAGGACGATTTGCGAGATACAACGACGACATAGTGAAGAATTATCCAATGCAATGGAGTGAAGGGCGAGAAGAGGAAGAAGAACAACAAGTAGAAAATAATTGTGGTGATAATTGGATCAAGTATTTCATTGATGCATATTCCACGAACCTTATTCCATGA

Protein sequence

MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSEFSDSCGDGSPTSPPQPLTIRPSTNNFSLHQSFPLLNPSLQSNDLFLQRTFSSSSPPPSTATVDTLVNRPLFPAGDFQKNNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKVILTNIIWVWLKYACRKSLADSRPRIRGRFARYNDDIVKNYPMQWSEGREEEEEQQVENNCGDNWIKYFIDAYSTNLIP

Homology

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BLAST of ClCG02G020570 vs. NCBI nr
Match: XP_038902180.1 (zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida])

HSP 1 Score: 411.4 bits (1056), Expect = 5.5e-111
Identity = 212/249 (85.14%), Postives = 220/249 (88.35%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSI-KLWNSEFSDSCGDGSPTSPPQPLTIRPST 60
           MAFSPFLSAASHSSADLAGVDFDWLPDSSI KLWNSEFSDSCGDGSPTSPPQ LTIRPS 
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSINKLWNSEFSDSCGDGSPTSPPQSLTIRPSN 60

Query: 61  NNFSLHQSFPLLNPSLQSNDLFLQRTFSSSSPPPSTA---TVDTLVNRPLFPAGDFQKNN 120
           NNF LHQSFP L+PSLQSNDLFLQRTFSSSSPPPS +     + L+NRPLFPAGDFQ+NN
Sbjct: 61  NNFLLHQSFPHLDPSLQSNDLFLQRTFSSSSPPPSASAPTAANRLINRPLFPAGDFQRNN 120

Query: 121 QRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKVILTNIIWVW 180
           QRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKI           
Sbjct: 121 QRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKI----------- 180

Query: 181 LKYACRKSLADSRPRIRGRFARYNDDIVKNYPMQWSEGREEEEEQQVENNCGDNWIKYFI 240
            KYACRKSLADSRPRIRGRFARYNDD+VKNYPMQWS G+EEE+E    NNCGDNWIKYFI
Sbjct: 181 -KYACRKSLADSRPRIRGRFARYNDDVVKNYPMQWSHGQEEEQE---ANNCGDNWIKYFI 234

Query: 241 DAYSTNLIP 246
           DAYSTNLIP
Sbjct: 241 DAYSTNLIP 234

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BLAST of ClCG02G020570 vs. NCBI nr
Match: XP_008463853.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X2 [Cucumis melo])

HSP 1 Score: 375.2 bits (962), Expect = 4.4e-100
Identity = 200/252 (79.37%), Postives = 214/252 (84.92%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSEFSDSCGDGSPTSPPQPLTIRPST 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNSEFSDSCGDGSP SPP+PL I PST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFSLHQSFPLLN-PSLQS-NDLFLQRTFSSSSPPPSTATVDTLVNRPLFPAGDFQK--N 120
           NNF LHQSFPLLN  SLQS ND FLQRTFSSS  PP +A +D  +NRPLFPAGDFQK  N
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQKKNN 120

Query: 121 NQRA-ESPVSCESSIT-IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKVILTNII 180
           N+R  ESPVSCESSIT IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKI        
Sbjct: 121 NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKI-------- 180

Query: 181 WVWLKYACRKSLADSRPRIRGRFARYNDDIVKNYPMQWSEGREEEEEQQVENNCGDNWIK 240
               KYACRKSLADSRPRIRGRFARYND++VKNYP+QW+  REEE++Q+  N+CGDNWIK
Sbjct: 181 ----KYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIK 240

Query: 241 YFIDAYSTNLIP 246
           YFID YS NLIP
Sbjct: 241 YFIDTYSANLIP 240

[Close]

BLAST of ClCG02G020570 vs. NCBI nr
Match: XP_008463852.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo] >TYK14365.1 zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 373.2 bits (957), Expect = 1.7e-99
Identity = 199/253 (78.66%), Postives = 214/253 (84.58%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSEFSDSCGDGSPTSPPQPLTIRPST 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNSEFSDSCGDGSP SPP+PL I PST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFSLHQSFPLLN-PSLQS-NDLFLQRTFSSSSPPPSTATVDTLVNRPLFPAGDFQK--- 120
           NNF LHQSFPLLN  SLQS ND FLQRTFSSS  PP +A +D  +NRPLFPAGDFQ+   
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNQRA-ESPVSCESSIT-IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKVILTNI 180
           NN+R  ESPVSCESSIT IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKI       
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKI------- 180

Query: 181 IWVWLKYACRKSLADSRPRIRGRFARYNDDIVKNYPMQWSEGREEEEEQQVENNCGDNWI 240
                KYACRKSLADSRPRIRGRFARYND++VKNYP+QW+  REEE++Q+  N+CGDNWI
Sbjct: 181 -----KYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWI 240

Query: 241 KYFIDAYSTNLIP 246
           KYFID YS NLIP
Sbjct: 241 KYFIDTYSANLIP 241

[Close]

BLAST of ClCG02G020570 vs. NCBI nr
Match: XP_011657240.1 (zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KGN47342.1 hypothetical protein Csa_023060 [Cucumis sativus])

HSP 1 Score: 369.8 bits (948), Expect = 1.8e-98
Identity = 204/259 (78.76%), Postives = 217/259 (83.78%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNS-EFSDSCGDGSPTSPPQPLTIRPST 60
           MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNS +FSDSCGDGSP SPP+PL IRPST
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPST 60

Query: 61  NNFSLHQS-FPLLNP-SLQSNDL--FLQRTFSSSSPPPSTATVDTLVNRPLFPAGDFQK- 120
           NNF LH S FPLLNP SLQSND   FLQRTFSSSSPPPS A +D  +NRPLFP GDFQK 
Sbjct: 61  NNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSSSPPPS-AAIDPPINRPLFPVGDFQKK 120

Query: 121 --NNQRA-ESPVSCESSIT-IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKVILT 180
             NN+R  ESPVSCESSIT IEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKI     
Sbjct: 121 NNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKI----- 180

Query: 181 NIIWVWLKYACRKSLADSRPRIRGRFARYNDDIVKNYPMQWS----EGREEEEEQQVENN 240
                  KYACRKSLADSRPRIRGRFARYND++VKNYP+QW+    E  EEEE+Q+  N+
Sbjct: 181 -------KYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANS 240

Query: 241 CGDNWIKYFIDAYSTNLIP 246
           CGDNWIKYFID YSTNLIP
Sbjct: 241 CGDNWIKYFIDTYSTNLIP 246

[Close]

BLAST of ClCG02G020570 vs. NCBI nr
Match: XP_022944273.1 (uncharacterized protein LOC111448769 isoform X1 [Cucurbita moschata])

HSP 1 Score: 358.2 bits (918), Expect = 5.6e-95
Identity = 187/251 (74.50%), Postives = 205/251 (81.67%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSEFSDSCGDGSPTSPPQPLTIRPSTN 60
           MAFSPFLSA SHSSADLA VDFDWLPDSSIKLWNSE S+SCGDGSPTSPPQPLT R  TN
Sbjct: 1   MAFSPFLSAVSHSSADLASVDFDWLPDSSIKLWNSEVSNSCGDGSPTSPPQPLTFRRPTN 60

Query: 61  NFSLHQSFPLLNPSLQSNDLFLQRTFSSSSPPPSTATVDTLVNRPLFPAGDF-----QKN 120
            F L QSF LLNPSLQ+ +  L RTFSSSS  P     ++LV+RPLFPAGDF     Q+N
Sbjct: 61  RFLLDQSFGLLNPSLQTTNNLLHRTFSSSSSSPPPPAAESLVSRPLFPAGDFKEWGWQRN 120

Query: 121 NQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKVILTNIIWV 180
            QRAESPVSCESSITIEG+SRACRYSPEEKKERIERY++KRNQRNFNKKI          
Sbjct: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKI---------- 180

Query: 181 WLKYACRKSLADSRPRIRGRFARYNDDIVKNYPMQWSEGREEEEEQQVENNCGDNWIKYF 240
             KYACRKSLADSRPRIRGRFARYND++ KN PMQWS G++EEEE++  NN G+NWIKYF
Sbjct: 181 --KYACRKSLADSRPRIRGRFARYNDNVAKNCPMQWSHGQKEEEEEEEANNGGENWIKYF 239

Query: 241 IDAYST-NLIP 246
           IDAYS+ NLIP
Sbjct: 241 IDAYSSANLIP 239

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BLAST of ClCG02G020570 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.6e-04
Identity = 28/65 (43.08%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 137 ACRYSPEEKKERIERYRTKRNQRNFNKKIKVILTNIIWVWLKYACRKSLADSRPRIRGRF 196
           A + SP E++ R+ RYR KR  R F K I            +YA RK+ A+ RPRI+GRF
Sbjct: 221 AVQLSPAEREARVLRYREKRKNRKFEKTI------------RYASRKAYAEMRPRIKGRF 273

Query: 197 ARYND 202
           A+  D
Sbjct: 281 AKRTD 273

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BLAST of ClCG02G020570 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 3.6e-04
Identity = 28/69 (40.58%), Postives = 37/69 (53.62%), Query Frame = 0


Query: 133 GMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKVILTNIIWVWLKYACRKSLADSRPRI 192
           G  RA   +  E++ R+ RYR KR  R F K I            +YA RK+ A+ RPRI
Sbjct: 283 GTQRAVPLTSAEREARVMRYREKRKNRKFEKTI------------RYASRKAYAEMRPRI 339

Query: 193 RGRFARYND 202
           +GRFA+  D
Sbjct: 343 KGRFAKRTD 339

[Close]

BLAST of ClCG02G020570 vs. ExPASy Swiss-Prot
Match: Q39057 (Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.7e-04
Identity = 36/107 (33.64%), Postives = 50/107 (46.73%), Query Frame = 0


Query: 92  PPSTATVDTLVNRPLFPAGDFQKNNQRAESPVSCESSITIEGMSRACRYSPEEKKERIER 151
           P STA V T  + P  P G  +      + P      IT+       + SP +++ R+ R
Sbjct: 266 PESTACV-TTASHPRTPKGTVE------QQPDPASQMITV------TQLSPMDREARVLR 325

Query: 152 YRTKRNQRNFNKKIKVILTNIIWVWLKYACRKSLADSRPRIRGRFAR 199
           YR KR  R F K I            +YA RK+ A+ RPR+ GRFA+
Sbjct: 326 YREKRKTRKFEKTI------------RYASRKAYAEIRPRVNGRFAK 347

[Close]

BLAST of ClCG02G020570 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.0e-04
Identity = 25/61 (40.98%), Postives = 35/61 (57.38%), Query Frame = 0


Query: 141 SPEEKKERIERYRTKRNQRNFNKKIKVILTNIIWVWLKYACRKSLADSRPRIRGRFARYN 200
           SP +++ R+ RYR K+  R F K I            +YA RK+ A+ RPRI+GRFA+  
Sbjct: 282 SPRDREARVLRYREKKKMRKFEKTI------------RYASRKAYAEKRPRIKGRFAKKK 330

Query: 201 D 202
           D
Sbjct: 342 D 330

[Close]

BLAST of ClCG02G020570 vs. ExPASy TrEMBL
Match: A0A1S3CK56 (zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.1e-100
Identity = 200/252 (79.37%), Postives = 214/252 (84.92%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSEFSDSCGDGSPTSPPQPLTIRPST 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNSEFSDSCGDGSP SPP+PL I PST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFSLHQSFPLLN-PSLQS-NDLFLQRTFSSSSPPPSTATVDTLVNRPLFPAGDFQK--N 120
           NNF LHQSFPLLN  SLQS ND FLQRTFSSS  PP +A +D  +NRPLFPAGDFQK  N
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQKKNN 120

Query: 121 NQRA-ESPVSCESSIT-IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKVILTNII 180
           N+R  ESPVSCESSIT IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKI        
Sbjct: 121 NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKI-------- 180

Query: 181 WVWLKYACRKSLADSRPRIRGRFARYNDDIVKNYPMQWSEGREEEEEQQVENNCGDNWIK 240
               KYACRKSLADSRPRIRGRFARYND++VKNYP+QW+  REEE++Q+  N+CGDNWIK
Sbjct: 181 ----KYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIK 240

Query: 241 YFIDAYSTNLIP 246
           YFID YS NLIP
Sbjct: 241 YFIDTYSANLIP 240

[Close]

BLAST of ClCG02G020570 vs. ExPASy TrEMBL
Match: A0A5D3CRZ2 (Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001070 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 8.1e-100
Identity = 199/253 (78.66%), Postives = 214/253 (84.58%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSEFSDSCGDGSPTSPPQPLTIRPST 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNSEFSDSCGDGSP SPP+PL I PST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFSLHQSFPLLN-PSLQS-NDLFLQRTFSSSSPPPSTATVDTLVNRPLFPAGDFQK--- 120
           NNF LHQSFPLLN  SLQS ND FLQRTFSSS  PP +A +D  +NRPLFPAGDFQ+   
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNQRA-ESPVSCESSIT-IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKVILTNI 180
           NN+R  ESPVSCESSIT IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKI       
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKI------- 180

Query: 181 IWVWLKYACRKSLADSRPRIRGRFARYNDDIVKNYPMQWSEGREEEEEQQVENNCGDNWI 240
                KYACRKSLADSRPRIRGRFARYND++VKNYP+QW+  REEE++Q+  N+CGDNWI
Sbjct: 181 -----KYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWI 240

Query: 241 KYFIDAYSTNLIP 246
           KYFID YS NLIP
Sbjct: 241 KYFIDTYSANLIP 241

[Close]

BLAST of ClCG02G020570 vs. ExPASy TrEMBL
Match: A0A1S3CK62 (zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 8.1e-100
Identity = 199/253 (78.66%), Postives = 214/253 (84.58%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSEFSDSCGDGSPTSPPQPLTIRPST 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNSEFSDSCGDGSP SPP+PL I PST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFSLHQSFPLLN-PSLQS-NDLFLQRTFSSSSPPPSTATVDTLVNRPLFPAGDFQK--- 120
           NNF LHQSFPLLN  SLQS ND FLQRTFSSS  PP +A +D  +NRPLFPAGDFQ+   
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNQRA-ESPVSCESSIT-IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKVILTNI 180
           NN+R  ESPVSCESSIT IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKI       
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKI------- 180

Query: 181 IWVWLKYACRKSLADSRPRIRGRFARYNDDIVKNYPMQWSEGREEEEEQQVENNCGDNWI 240
                KYACRKSLADSRPRIRGRFARYND++VKNYP+QW+  REEE++Q+  N+CGDNWI
Sbjct: 181 -----KYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWI 240

Query: 241 KYFIDAYSTNLIP 246
           KYFID YS NLIP
Sbjct: 241 KYFIDTYSANLIP 241

[Close]

BLAST of ClCG02G020570 vs. ExPASy TrEMBL
Match: A0A0A0KG14 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301610 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 8.9e-99
Identity = 204/259 (78.76%), Postives = 217/259 (83.78%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNS-EFSDSCGDGSPTSPPQPLTIRPST 60
           MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNS +FSDSCGDGSP SPP+PL IRPST
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPST 60

Query: 61  NNFSLHQS-FPLLNP-SLQSNDL--FLQRTFSSSSPPPSTATVDTLVNRPLFPAGDFQK- 120
           NNF LH S FPLLNP SLQSND   FLQRTFSSSSPPPS A +D  +NRPLFP GDFQK 
Sbjct: 61  NNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSSSPPPS-AAIDPPINRPLFPVGDFQKK 120

Query: 121 --NNQRA-ESPVSCESSIT-IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKVILT 180
             NN+R  ESPVSCESSIT IEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKI     
Sbjct: 121 NNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKI----- 180

Query: 181 NIIWVWLKYACRKSLADSRPRIRGRFARYNDDIVKNYPMQWS----EGREEEEEQQVENN 240
                  KYACRKSLADSRPRIRGRFARYND++VKNYP+QW+    E  EEEE+Q+  N+
Sbjct: 181 -------KYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANS 240

Query: 241 CGDNWIKYFIDAYSTNLIP 246
           CGDNWIKYFID YSTNLIP
Sbjct: 241 CGDNWIKYFIDTYSTNLIP 246

[Close]

BLAST of ClCG02G020570 vs. ExPASy TrEMBL
Match: A0A6J1FXW4 (uncharacterized protein LOC111448769 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448769 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.7e-95
Identity = 187/251 (74.50%), Postives = 205/251 (81.67%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSEFSDSCGDGSPTSPPQPLTIRPSTN 60
           MAFSPFLSA SHSSADLA VDFDWLPDSSIKLWNSE S+SCGDGSPTSPPQPLT R  TN
Sbjct: 1   MAFSPFLSAVSHSSADLASVDFDWLPDSSIKLWNSEVSNSCGDGSPTSPPQPLTFRRPTN 60

Query: 61  NFSLHQSFPLLNPSLQSNDLFLQRTFSSSSPPPSTATVDTLVNRPLFPAGDF-----QKN 120
            F L QSF LLNPSLQ+ +  L RTFSSSS  P     ++LV+RPLFPAGDF     Q+N
Sbjct: 61  RFLLDQSFGLLNPSLQTTNNLLHRTFSSSSSSPPPPAAESLVSRPLFPAGDFKEWGWQRN 120

Query: 121 NQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKVILTNIIWV 180
            QRAESPVSCESSITIEG+SRACRYSPEEKKERIERY++KRNQRNFNKKI          
Sbjct: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKI---------- 180

Query: 181 WLKYACRKSLADSRPRIRGRFARYNDDIVKNYPMQWSEGREEEEEQQVENNCGDNWIKYF 240
             KYACRKSLADSRPRIRGRFARYND++ KN PMQWS G++EEEE++  NN G+NWIKYF
Sbjct: 181 --KYACRKSLADSRPRIRGRFARYNDNVAKNCPMQWSHGQKEEEEEEEANNGGENWIKYF 239

Query: 241 IDAYST-NLIP 246
           IDAYS+ NLIP
Sbjct: 241 IDAYSSANLIP 239

[Close]

BLAST of ClCG02G020570 vs. TAIR 10
Match: AT5G59990.1 (CCT motif family protein )

HSP 1 Score: 105.1 bits (261), Expect = 7.9e-23
Identity = 67/141 (47.52%), Postives = 87/141 (61.70%), Query Frame = 0


Query: 104 RPLFPAGDFQKNNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNK 163
           R    AGD  ++++R  S V  ES+  IEGMS+A +YSPEEKKE+IE+YR+KRN RNFNK
Sbjct: 122 RRALSAGDLPRSSRRESSTVWSESNAIIEGMSKAYKYSPEEKKEKIEKYRSKRNLRNFNK 181

Query: 164 KIKVILTNIIWVWLKYACRKSLADSRPRIRGRFARYNDDIVKNYPMQWSEGREEEEEQQV 223
           +I            KY CRK+LADSRPRIRGRFAR ND+I            ++E+   +
Sbjct: 182 RI------------KYECRKTLADSRPRIRGRFAR-NDEI-----------SQQEQVDVM 237

Query: 224 ENNCG--DNWIKYFIDAYSTN 243
           E   G  D W   F+D++S N
Sbjct: 242 EAVVGDVDTWAS-FLDSFSAN 237

[Close]

BLAST of ClCG02G020570 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 82.8 bits (203), Expect = 4.2e-16
Identity = 55/129 (42.64%), Postives = 73/129 (56.59%), Query Frame = 0


Query: 104 RPLFPAGDFQKNNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNK 163
           R ++  GD Q N +   S  +     + E   +  RYS EE+KE+I +YR KRNQRNF K
Sbjct: 174 RRVYSTGDLQNNMEMQRSSENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTK 233

Query: 164 KIKVILTNIIWVWLKYACRKSLADSRPRIRGRFARYNDDIVKNYPMQ------WS-EGRE 223
            I            KYACRK+LADSRPRIRGRFAR ND++V+   ++      W  +G  
Sbjct: 234 TI------------KYACRKTLADSRPRIRGRFAR-NDEVVEIPNIEDDDSELWKLDGLH 289

Query: 224 EEEEQQVEN 226
           E+EE  V +
Sbjct: 294 EKEEASVSS 289

[Close]

BLAST of ClCG02G020570 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-14
Identity = 71/200 (35.50%), Postives = 101/200 (50.50%), Query Frame = 0


Query: 46  PTSPPQPLTIRPSTN--NFSLHQSF------------PLLNPSLQSNDLFLQRTFSSSSP 105
           P S  Q LT+  + +  NFS  ++F            P   P ++ +  F  +   +S  
Sbjct: 72  PISQLQTLTLTHTNSFPNFSGFENFDTVKTEQLLFNSPFDAPFMEDSSNFQNQNLLNS-- 131

Query: 106 PPSTATVDTLVNRPLFPAGDFQK-----NNQRA-ESPVSCESSITI-----EGMSRACRY 165
           P  +   D +  R ++  GD Q        QR+  SP++ ESS T      E   R  RY
Sbjct: 132 PEDSFFSDHM--RRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRY 191

Query: 166 SPEEKKERIERYRTKRNQRNFNKKIKVILTNIIWVWLKYACRKSLADSRPRIRGRFARYN 221
           S EE+KE+I +YR KR QRNF K I            KYACRK+LAD+RPR+RGRFAR N
Sbjct: 192 SSEERKEKISKYRAKRTQRNFTKTI------------KYACRKTLADNRPRVRGRFAR-N 251

[Close]

BLAST of ClCG02G020570 vs. TAIR 10
Match: AT5G59990.2 (CCT motif family protein )

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-14
Identity = 40/66 (60.61%), Postives = 51/66 (77.27%), Query Frame = 0


Query: 104 RPLFPAGDFQKNNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNK 163
           R    AGD  ++++R  S V  ES+  IEGMS+A +YSPEEKKE+IE+YR+KRN RNFNK
Sbjct: 122 RRALSAGDLPRSSRRESSTVWSESNAIIEGMSKAYKYSPEEKKEKIEKYRSKRNLRNFNK 181

Query: 164 KIKVIL 170
           +IKVIL
Sbjct: 182 RIKVIL 187

[Close]

BLAST of ClCG02G020570 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 )

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-13
Identity = 49/125 (39.20%), Postives = 66/125 (52.80%), Query Frame = 0


Query: 126 ESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKVILTNIIWVWLKYACRKSL 185
           E  I  E  ++  RYS EE+K+RI RY  K+NQRNFNK I            KY CRK+L
Sbjct: 120 EGGIQAEPNTKVGRYSVEERKDRIMRYLKKKNQRNFNKTI------------KYVCRKTL 179

Query: 186 ADSRPRIRGRFARYNDDIVKNYPMQWSEGREEEEEQQVENNCGDNWIKY-----FIDAYS 245
           AD R R+RGRFAR ND   +   M  +     E+E+ + +   D  I+      ++    
Sbjct: 180 ADRRVRVRGRFARNNDTCEEQPHMSKNHNNHSEKEEDMFSGSDDYLIQMEHDDGWLHEAM 232

The following BLAST results are available for this feature:

BLAST of ClCG02G020570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902180.1	5.5e-111	85.14	zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida]	[more]
XP_008463853.1	4.4e-100	79.37	PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X2 [Cucumis melo]	[more]
XP_008463852.1	1.7e-99	78.66	PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo] >TYK143...	[more]
XP_011657240.1	1.8e-98	78.76	zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KGN47342.1 hypothetical p...	[more]
XP_022944273.1	5.6e-95	74.50	uncharacterized protein LOC111448769 isoform X1 [Cucurbita moschata]	[more]

BLAST of ClCG02G020570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK53	1.6e-04	43.08	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q940T9	3.6e-04	40.58	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
Q39057	4.7e-04	33.64	Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1	[more]
O50055	8.0e-04	40.98	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]

BLAST of ClCG02G020570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CK56	2.1e-100	79.37	zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3CRZ2	8.1e-100	78.66	Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CK62	8.1e-100	78.66	zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KG14	8.9e-99	78.76	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301610 PE=4 SV...	[more]
A0A6J1FXW4	2.7e-95	74.50	uncharacterized protein LOC111448769 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of ClCG02G020570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59990.1	7.9e-23	47.52	CCT motif family protein	[more]
AT5G41380.1	4.2e-16	42.64	CCT motif family protein	[more]
AT1G63820.1	1.4e-14	35.50	CCT motif family protein	[more]
AT5G59990.2	2.3e-14	60.61	CCT motif family protein	[more]
AT3G12890.1	1.5e-13	39.20	activator of spomin::LUC2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 146..198 e-value: 8.6E-12 score: 45.0
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 157..199 score: 8.869311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..59
None	No IPR available	PANTHER	PTHR31319	ZINC FINGER PROTEIN CONSTANS-LIKE 4	coord: 73..240
None	No IPR available	PANTHER	PTHR31319:SF73	CCT MOTIF FAMILY PROTEIN	coord: 73..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G020570.2	ClCG02G020570.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding