ClCG02G020050 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G020050
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Rab5-interacting
Location	CG_Chr02: 34664041 .. 34666423 (+)
RNA-Seq Expression	ClCG02G020050
Synteny	ClCG02G020050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGCTGGCATCTTCCACACGTGCTCCCAAGTCCAAAGCCGAAAGTGAAAAAACGAGCCGAGAGAAACGATACATTCTTGCTTTGCAGTGTTTTGACCGCAAATGAATCCTGCAAATTGAAGTTTCTTCTTCGTTGATCCCACCGTCTCTCTCTATCTTCTTCCCTGAAATCCTTAGGAGTTGCTGAATACAGTGTTTCTATTCCCACTGGAGCATTTTAGCTGCACTTTTTCCGGAATCTAGATCTAAGCTTACTTTAGATTCTTTGGTTGTTTCTGTTTTATTTTCCCGAACAGTGATTGATTGAATTATCCGGTATGAAAGACGCAAAACCGGTTAAGTTCAATCTGCATCAGCATCAAGATCACCAAAATGGTCACTTGGCCCCATTCAAGCTCGCTAAATTGTTCGATCCAGAGGCCTCCTGGGACAAGGTACTTGATATTTTAGGTCTTTGATCGAAACGGAAATTGTTTGTAATTGTCTCGCACATCTTTACTGTTGCTGCTTGTGTTCTCTGTTGTGTTTAGGAGGAATTAGGATTTAAGTGTTGAAATGTTGCAATTGAAGTAGAGATTGTAATTAGTGAAACGCCATATTCATTAATTCTTGATTTAGAAAGTAACAGATAACTGCTACTGCGACTTTGCCATTTTCCCAATTGGTGTTTCTACTTGCATCATTGAATATCGTTCTTAGTTTCTGTTTATCAAATTTGTTAATAGGACCAACTAGGAGATGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTTGGACTGTTGTGGGGATCCATACCTTTGGTTGGAGGCATTTGGTTTCTAATGTGAGTTGCGCATTACAACCTTTTGAATACTCGATTACTAGGAAAGCATATATGCATTGCTCTTTATGTAACTTACTAACTTAAAGTTATAAGCTAATTTGACATCACAGATGAAGTTTTGATTATTTCTAAATTTTAGATACTAATATGTTCCACATTTATATGATTTTATTTCATTGATTGTATTTTTTCCTTTCGCTGAATGTTTGTCTCCCTTATGAATCCACGGACTCTAAAATCAATAATGTTTAAAAATAACTGTTGTGGTGGTTATAGGAGTACTTTTTGGACAAGCAGTGATGTTGATTTCGTATCGGGGTTTTAAACCTATCTTATCTAGTTGTAATAAAATAAATTTTATCTACTAATAAAATATTTCTGTTTTTGTGTATATATAAGTGATGAAAAAACACTTGGATCTTACTTAAATTAGAAAGAAATCATAGTTGGATTGATCATGATAGCAAAAGTAAATGAAAAATGTAAGGATATAAAATATTATAATTGTAATTTCTTTTTCAAATTACAAAAAATCTGAAAAGTTTTGCTCTAGACGAGCCATTTACTGCAATTCTGTTGTTATTATGATAATTTTTAACCATGGGAGTATTCTTTCACAAGTTAGTGGTGTTGATTATTGATTATGCTACACATCAATTGTCCTTTCTTACTGTTCTCCCTTATCTCTTTCTCTCGATAATTAATTTCGAATTGCAGGAGTATTCATTGAGAAATCTGGTGTTAGCTTTGGATTATGCTGTGCATCCAAGAATCCTTTTTTCAATTTTGTACGTATATGCAAGCTATCTTACTGATGCTGGTTTCCATTTTCAGTTTCTTGGCAATATCAACCAGCGTTGTATATGGATATTATGCAATGATATTAAAAGTCGATGAAGAAGAATTTGGAGGTCATGGGGCTCTCCTCCAAGAGGGCCTTTTTGCTTCTATAACTCTCTTTCTGGTACTCTGCCATCCCTTTGCTTTTCTTTTGGTTTATTAAGAAATACAATGCACCATTTAACCGAACACTTCTTCATGAAGGCCTCGTTTTGCTATGAAGTTCAATTCATTCAAGATCGGTCTACTGGTTCAGACAGCTGACTTCCTTCTCTTCATGATTTTTCAGCTTGCTTGGATTCTCGTATACAGCTTGGCACACTTTTGATTGGCGAAGAATGATTTTGCATCCATGAATTACTTGGTGAAGTTCCAACAATGAACTTAGTTATACTTGATGCCCTGCTCATTTACGTTGCTTCTAATTGGTGGCACAAATTTTTTTAACATTCATCATGTTGAACAAATTGATTTAGCCGAGCAGGAAAACTTCAGCATTTGATATATGATGATAGATTGATTTTCGATCTCAAATTCGCTGTTGACATTCTCCAAAGGCCACATAGAGATGGGCTATGGATGTAATCCTTGTTAAAATTAACACCTTGTATTGTCATCAATTAATAGCTAGTTGGGCACCAACAATGTTCTGTACATTTGATGATCTAGGGTGAAACCTACTTGTTCTTAAGTAATGGTTTCTCCTTTCCCG

mRNA sequence

ATGCGGCTGGCATCTTCCACACGTGCTCCCAAGTCCAAAGCCGAAAACGCAAAACCGGTTAAGTTCAATCTGCATCAGCATCAAGATCACCAAAATGGTCACTTGGCCCCATTCAAGCTCGCTAAATTGTTCGATCCAGAGGCCTCCTGGGACAAGGACCAACTAGGAGATGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTTGGACTGTTGTGGGGATCCATACCTTTGGTTGGAGGCATTTGGTTTCTAATTTTCTTGGCAATATCAACCAGCGTTGTATATGGATATTATGCAATGATATTAAAAGTCGATGAAGAAGAATTTGGAGGTCATGGGGCTCTCCTCCAAGAGGGCCTTTTTGCTTCTATAACTCTCTTTCTGCTTGCTTGGATTCTCGTATACAGCTTGGCACACTTTTGATTGGCGAAGAATGATTTTGCATCCATGAATTACTTGGTGAAGTTCCAACAATGAACTTAGTTATACTTGATGCCCTGCTCATTTACGTTGCTTCTAATTGGTGGCACAAATTTTTTTAACATTCATCATGTTGAACAAATTGATTTAGCCGAGCAGGAAAACTTCAGCATTTGATATATGATGATAGATTGATTTTCGATCTCAAATTCGCTGTTGACATTCTCCAAAGGCCACATAGAGATGGGCTATGGATGTAATCCTTGTTAAAATTAACACCTTGTATTGTCATCAATTAATAGCTAGTTGGGCACCAACAATGTTCTGTACATTTGATGATCTAGGGTGAAACCTACTTGTTCTTAAGTAATGGTTTCTCCTTTCCCG

Coding sequence (CDS)

ATGCGGCTGGCATCTTCCACACGTGCTCCCAAGTCCAAAGCCGAAAACGCAAAACCGGTTAAGTTCAATCTGCATCAGCATCAAGATCACCAAAATGGTCACTTGGCCCCATTCAAGCTCGCTAAATTGTTCGATCCAGAGGCCTCCTGGGACAAGGACCAACTAGGAGATGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTTGGACTGTTGTGGGGATCCATACCTTTGGTTGGAGGCATTTGGTTTCTAATTTTCTTGGCAATATCAACCAGCGTTGTATATGGATATTATGCAATGATATTAAAAGTCGATGAAGAAGAATTTGGAGGTCATGGGGCTCTCCTCCAAGAGGGCCTTTTTGCTTCTATAACTCTCTTTCTGCTTGCTTGGATTCTCGTATACAGCTTGGCACACTTTTGA

Protein sequence

MRLASSTRAPKSKAENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWILVYSLAHF

Homology

[Close]

BLAST of ClCG02G020050 vs. NCBI nr
Match: XP_038900616.1 (respirasome Complex Assembly Factor 1-like [Benincasa hispida])

HSP 1 Score: 255.4 bits (651), Expect = 2.9e-64
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 15  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 74
           + +KPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW
Sbjct: 2   KESKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 61

Query: 75  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 134
           GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI
Sbjct: 62  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 121

Query: 135 LVYSLAHF 143
           LVYSLAHF
Sbjct: 122 LVYSLAHF 129

[Close]

BLAST of ClCG02G020050 vs. NCBI nr
Match: XP_008464121.1 (PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo] >XP_016903137.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo] >TYK24026.1 Rab5-interacting [Cucumis melo var. makuwa])

HSP 1 Score: 254.2 bits (648), Expect = 6.6e-64
Identity = 125/128 (97.66%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 15  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 74
           + AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLW
Sbjct: 2   KEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 61

Query: 75  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 134
           GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI
Sbjct: 62  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 121

Query: 135 LVYSLAHF 143
           LVYSLAHF
Sbjct: 122 LVYSLAHF 129

[Close]

BLAST of ClCG02G020050 vs. NCBI nr
Match: XP_004143124.1 (uncharacterized protein RAB5IF homolog [Cucumis sativus] >KGN47142.1 hypothetical protein Csa_020819 [Cucumis sativus])

HSP 1 Score: 253.8 bits (647), Expect = 8.6e-64
Identity = 124/128 (96.88%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 15  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 74
           + AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAV+LGLLW
Sbjct: 2   KEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVILGLLW 61

Query: 75  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 134
           GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI
Sbjct: 62  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 121

Query: 135 LVYSLAHF 143
           LVYSLAHF
Sbjct: 122 LVYSLAHF 129

[Close]

BLAST of ClCG02G020050 vs. NCBI nr
Match: XP_022986965.1 (uncharacterized protein C20orf24 homolog [Cucurbita maxima] >XP_022986966.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima])

HSP 1 Score: 252.3 bits (643), Expect = 2.5e-63
Identity = 122/128 (95.31%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 15  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 74
           + +KP+K NLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW
Sbjct: 2   KESKPIKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 61

Query: 75  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 134
           GSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI
Sbjct: 62  GSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 121

Query: 135 LVYSLAHF 143
           LVYSLAHF
Sbjct: 122 LVYSLAHF 129

[Close]

BLAST of ClCG02G020050 vs. NCBI nr
Match: XP_022947918.1 (uncharacterized protein C20orf24 homolog isoform X2 [Cucurbita moschata])

HSP 1 Score: 251.9 bits (642), Expect = 3.3e-63
Identity = 123/128 (96.09%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 15  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 74
           + A PVKFNLHQHQ+HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW
Sbjct: 2   KEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 61

Query: 75  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 134
           G+IPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI
Sbjct: 62  GAIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 121

Query: 135 LVYSLAHF 143
           LVYSLAHF
Sbjct: 122 LVYSLAHF 129

[Close]

BLAST of ClCG02G020050 vs. ExPASy Swiss-Prot
Match: Q9CQT9 (Respirasome Complex Assembly Factor 1 OS=Mus musculus OX=10090 GN=Rab5if PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.3e-18
Identity = 45/112 (40.18%), Postives = 71/112 (63.39%), Query Frame = 0


Query: 32  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLA 91
           NG L     +K+   +A+W DKD+  DV++W RQ +A+VLG++WG +PL G +    F  
Sbjct: 17  NGALKVSVWSKVLRSDAAWDDKDEFLDVIYWFRQIIALVLGVIWGVLPLRGFLGIAGFCL 76

Query: 92  ISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWILVYSLAHF 143
           I+  V+Y Y++  L++DEEE+GG   L +EG   S  LF++ WI+ Y+  H+
Sbjct: 77  INAGVLYLYFSNYLQIDEEEYGGTWELTKEGFMTSFALFMVIWIIFYTAIHY 128

[Close]

BLAST of ClCG02G020050 vs. ExPASy Swiss-Prot
Match: Q9BUV8 (Respirasome Complex Assembly Factor 1 OS=Homo sapiens OX=9606 GN=RAB5IF PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.5e-15
Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = 0


Query: 32  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLA 91
           NG L     +K+   +A+W DKD+  DV++W RQ +AVVLG++WG +PL G +    F  
Sbjct: 17  NGALKVSVWSKVLRSDAAWEDKDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCL 76

Query: 92  ISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWILVYSLAH 142
           I+  V+Y Y++  L++DEEE+GG   L +EG   S  LF++     ++  H
Sbjct: 77  INAGVLYLYFSNYLQIDEEEYGGTWELTKEGFMTSFALFMVCVADSFTTGH 127

[Close]

BLAST of ClCG02G020050 vs. ExPASy TrEMBL
Match: A0A1S4E4J0 (uncharacterized protein C20orf24 homolog OS=Cucumis melo OX=3656 GN=LOC103502078 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.2e-64
Identity = 125/128 (97.66%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 15  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 74
           + AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLW
Sbjct: 2   KEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 61

Query: 75  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 134
           GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI
Sbjct: 62  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 121

Query: 135 LVYSLAHF 143
           LVYSLAHF
Sbjct: 122 LVYSLAHF 129

[Close]

BLAST of ClCG02G020050 vs. ExPASy TrEMBL
Match: A0A5D3DK85 (Rab5-interacting OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G001250 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.2e-64
Identity = 125/128 (97.66%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 15  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 74
           + AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLW
Sbjct: 2   KEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 61

Query: 75  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 134
           GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI
Sbjct: 62  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 121

Query: 135 LVYSLAHF 143
           LVYSLAHF
Sbjct: 122 LVYSLAHF 129

[Close]

BLAST of ClCG02G020050 vs. ExPASy TrEMBL
Match: A0A0A0KFE5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190330 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.1e-64
Identity = 124/128 (96.88%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 15  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 74
           + AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAV+LGLLW
Sbjct: 2   KEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVILGLLW 61

Query: 75  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 134
           GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI
Sbjct: 62  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 121

Query: 135 LVYSLAHF 143
           LVYSLAHF
Sbjct: 122 LVYSLAHF 129

[Close]

BLAST of ClCG02G020050 vs. ExPASy TrEMBL
Match: A0A6J1JFH8 (uncharacterized protein C20orf24 homolog OS=Cucurbita maxima OX=3661 GN=LOC111484545 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.2e-63
Identity = 122/128 (95.31%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 15  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 74
           + +KP+K NLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW
Sbjct: 2   KESKPIKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 61

Query: 75  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 134
           GSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI
Sbjct: 62  GSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 121

Query: 135 LVYSLAHF 143
           LVYSLAHF
Sbjct: 122 LVYSLAHF 129

[Close]

BLAST of ClCG02G020050 vs. ExPASy TrEMBL
Match: A0A6J1G7Y2 (uncharacterized protein C20orf24 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451658 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.6e-63
Identity = 123/128 (96.09%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 15  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 74
           + A PVKFNLHQHQ+HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW
Sbjct: 2   KEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLW 61

Query: 75  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 134
           G+IPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI
Sbjct: 62  GAIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 121

Query: 135 LVYSLAHF 143
           LVYSLAHF
Sbjct: 122 LVYSLAHF 129

[Close]

BLAST of ClCG02G020050 vs. TAIR 10
Match: AT5G59410.1 (Rab5-interacting family protein )

HSP 1 Score: 208.4 bits (529), Expect = 3.8e-54
Identity = 100/129 (77.52%), Postives = 114/129 (88.37%), Query Frame = 0


Query: 15  ENAKPVKFN-LHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLL 74
           + +K  K N L Q ++HQN HL+P KLAKLFDP+ASWDKDQLGDVLHWIRQ V ++ GLL
Sbjct: 2   KESKSAKLNQLQQQENHQNAHLSPSKLAKLFDPDASWDKDQLGDVLHWIRQVVGLISGLL 61

Query: 75  WGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAW 134
           WGSIPLVGGIW ++FLAIS+ +VYGYYAMILKVDEE+FGGH ALLQEGLFAS+TLFLLAW
Sbjct: 62  WGSIPLVGGIWIILFLAISSGIVYGYYAMILKVDEEDFGGHAALLQEGLFASLTLFLLAW 121

Query: 135 ILVYSLAHF 143
           ILVYSLAHF
Sbjct: 122 ILVYSLAHF 130

[Close]

BLAST of ClCG02G020050 vs. TAIR 10
Match: AT2G29020.1 (Rab5-interacting family protein )

HSP 1 Score: 188.0 bits (476), Expect = 5.4e-48
Identity = 87/118 (73.73%), Postives = 102/118 (86.44%), Query Frame = 0


Query: 25  HQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIW 84
           H+   HQN HL  F  AKLFD EASWDKDQLGDVLHWIRQ V ++ GLLWG+IPLVGGIW
Sbjct: 16  HEQIYHQNSHLGSFNFAKLFDSEASWDKDQLGDVLHWIRQVVGLLCGLLWGAIPLVGGIW 75

Query: 85  FLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWILVYSLAHF 143
            L+FLAIS+ +VYGYYA++LK+DEE+FGGH ALLQ+GLFAS++LFLLAWILVYSL+ F
Sbjct: 76  LLLFLAISSGIVYGYYALVLKIDEEDFGGHAALLQDGLFASLSLFLLAWILVYSLSSF 133

The following BLAST results are available for this feature:

BLAST of ClCG02G020050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900616.1	2.9e-64	97.66	respirasome Complex Assembly Factor 1-like [Benincasa hispida]	[more]
XP_008464121.1	6.6e-64	97.66	PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo] >XP_016903137...	[more]
XP_004143124.1	8.6e-64	96.88	uncharacterized protein RAB5IF homolog [Cucumis sativus] >KGN47142.1 hypothetica...	[more]
XP_022986965.1	2.5e-63	95.31	uncharacterized protein C20orf24 homolog [Cucurbita maxima] >XP_022986966.1 unch...	[more]
XP_022947918.1	3.3e-63	96.09	uncharacterized protein C20orf24 homolog isoform X2 [Cucurbita moschata]	[more]

BLAST of ClCG02G020050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CQT9	3.3e-18	40.18	Respirasome Complex Assembly Factor 1 OS=Mus musculus OX=10090 GN=Rab5if PE=1 SV...	[more]
Q9BUV8	4.5e-15	38.74	Respirasome Complex Assembly Factor 1 OS=Homo sapiens OX=9606 GN=RAB5IF PE=1 SV=...	[more]

BLAST of ClCG02G020050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E4J0	3.2e-64	97.66	uncharacterized protein C20orf24 homolog OS=Cucumis melo OX=3656 GN=LOC103502078...	[more]
A0A5D3DK85	3.2e-64	97.66	Rab5-interacting OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G001...	[more]
A0A0A0KFE5	4.1e-64	96.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190330 PE=4 SV=1	[more]
A0A6J1JFH8	1.2e-63	95.31	uncharacterized protein C20orf24 homolog OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1G7Y2	1.6e-63	96.09	uncharacterized protein C20orf24 homolog isoform X2 OS=Cucurbita moschata OX=366...	[more]

BLAST of ClCG02G020050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59410.1	3.8e-54	77.52	Rab5-interacting family protein	[more]
AT2G29020.1	5.4e-48	73.73	Rab5-interacting family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029008	Rab5-interacting protein family	PFAM	PF07019	Rab5ip	coord: 58..137 e-value: 8.6E-14 score: 51.9
None	No IPR available	PANTHER	PTHR12906:SF2	BNAA04G16800D PROTEIN	coord: 17..142
IPR010742	Rab5-interacting protein	PANTHER	PTHR12906	PROTEIN C20ORF24 RAB5-INTERACTING PROTEIN	coord: 17..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G020050.1	ClCG02G020050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006996	organelle organization
cellular_component	GO:0016021	integral component of membrane