ClCG02G018900 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G018900
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	CBS domain-containing protein CBSX3, mitochondrial
Location	CG_Chr02: 33639785 .. 33644231 (-)
RNA-Seq Expression	ClCG02G018900
Synteny	ClCG02G018900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAAAAGAAATAATTGAGAGACAAAATCGGGTCTCACAGTTCCATTCCATGAGCTTCGCTTCGCTTAATCTTCCTTTAGGTCTCATTCTCCAAAACAGCTAACTCTTCCTCTTTCACTTTTTTTGGTTCTCAACCTCCTTCTTCAACCTACAGTTTTTCTTCCGGATCATCCTCAGGTACATCTCTTCTTCTCGCCATTTCCTTCTCATTTTCCTCTGATTCTTATCGTTTTCCTGCAATCGACGCTCAACTCGGTGAGGTATTTGGATTCTTTTTCGCTTCGTCTTCTTTTACTGCCTGTGACGCTTGATTTTTCTCTCGCTTTTCGTTTTAATGCGTTTGTCAACCTCTGCGCTGCTGATTGTTTTTCCTTACTGGTGTGCTGATTGATTTCTTTTCTTTTTCTTCTCTTTTCAGTTCCTTTGTATTCAGTATGCTTGGTGTACTGATCTCGGTTAGATCGAGTTTGAATCCTGTTTTGTATTCTGGACATTTATATCTTTATCGATTGCATTAATTAGTTTAGTGGAACTGTGCTGGCTTTGACCAACGCCGGTTGATTCAATACTTGTTCCTCTCCGTGTATAATTAATCGATTTTTTTCATCCTCATATTCCCGTACACGTTCTTCTACATTAGATCTTCATATTTATGGAATAAATTAATACGGATAAGGTGAGTAATTTAATACAAATGAGCTGAGCTAATTTATTTCTCAAGTGAAGACTGGCTGCTAGCTCAGCGGAAAGAGGAAAAATTAGCCATGTCTTGTCATGTTATGGAGGAAATGGCGTACATACATTATTGTGCTTCGATTGTCAAGTTTCGTGCAAGCTGTTGTTTCTTGTTTTCTTGCTATATGGATTTCTAGATGTAGATTATTGGTTAAATTACAGGTTTATCCATAACATCTCTTCGTAATTTGTTGTTTAATGCTCATGTCTACCTCTGATGTGCGATCTTGGTCGGATCATCCACTCCAAGCTCACTTGTAAGACAAAATCTTACATCGGTGTGGACTATGCCCAACACACTCTGATGCTTGAATCAATATTAATCGAAATGGTGTCAAGCTGGGAGTGTTTCCCTACTTATACTACCTCCTTGACACTCTCCTGTGACCCACGCTCGGGGTTCTGTGGTGTCAGTGGGGTGCTCATACTTAAACTTTCAACTTTGTGTTTCACAGGTTCTTGGAAAAAAAACAAATTATGTCTAATAGAGTTCTGAACTTTCAACTTTGTGTCTATTAGATTCTTGAATTAAAGAAAAGAAAAAGAGTTGAAGATCAAAGGAATGTATTTGTAATTTTGGAAGTTTTGAGACCTACCTGACACAAACCTCAAAATCCAGAGACTAAATTTATTATTTAACATAATAATTAATGGAAGGTCTTAGTCATTATTTTCTTCAGTACGGGTACATTTGTAATGGACTGATGATTTCTGATAAATGTTGCGCACTCCAAAGTTCAAAGAGACCTTATTGTACACATTTTTTGAGCCTCTGGTGCAACAGGTAAAGATGCAAGGTGCTGTGCGATCATTTCTGTCACATGGAAACGTTGTGAAAACTGCTGTTTTGCAACAAATTCGTGTAGCAAACCCCCATATGAGGCCTGCAATGCTTTCACGCTTTTCAACATCGGCTAGTTCTGTAAACATGGAAGAGCATGGCTTTGAAAGCACTACCATTGATGACATCTTGAAAGCTAAAGGCAAAAGTGCTGATGGATCTTGGCTTTGGTGCACCACAGAAGACACAGTCTATGATGCTGTTCAGTCGGTATGCTTCCTTTTGAGAGTTTTCTTTTTTTTTTTTTTTTCTTCTTCATCTTCTTCTTTGAACATTTTTATATCTTTTCTTTATTTTAATGAGAACTTCATATCTTGTTAAGAAAATTGTTTACTTCTGCTATTCATACTTACACCCTCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACCTGCGGAGCAAAATTCAATAGCTGGTATTATAACAGAGAGAGGTACGTGATTCGATATGCTTTCTCAATGCACAGGTGTTTTCTCTGAATATATGGGTTCAACTAAAAAATTTATGGTTCTATCCTAACTAGAAAGAAAAGATTCATATATATTGTAGTTTGAGACAAATAACAAATGTATGTACTCTTGGAAATCTTTTTTTCTTTTAAGTTTGATTAGAAACAAATTTCATTGAGGTATGAAATTTACAAAAGATGGGCGATAGCCCCAATCAAAGGAGTTAGTTACGAAAGATCTCTTGGAAGATCGATAACATGTTAAAAAAAATCTCTCGGAATTCTTTTAAGTCCCAATAGTCTGCAATTGGCTGCTTCAAACTCGGAAATCCAAACCTCTGATCGGTTTCTTTGTGTTTTGCTATTCTTCTCCAGAAACCTACATATTTTTATTGGTTTTTTGGTAGAGATTTCAAAGTAAACTGGTGTTTGTTTTGTTTTCTTAATGTTGCTGGGAGTAAATTTGCACTATTTTCATACTTTTGGCATTCCCCAAAAATGGTTTCTAGTTATGATTGTACCATACTAAAACTGTGTAGTTTAAGATTACTGATACTTGGTGGCTTTTCCTCTTTTGTCATTTCTATTCATACCTAACGGGAAAAATACTTGGGTGCATCTAAACTACACCTATCTTTGAGTATCCTACCAAATTCTTTAATCATAATTTGCAATGTGACAATAAGTGTGAGATGCACGTCCCTGCCTTTTACTTTCCTTGTATGACGACCTTAGAATGTTATTTCTAAGTTTTAGGTCCAACAAAGGCATCTTCTTGTCTTGTGGAATGCAATATCTGAAATCTGAGCCTTTTCACACATTTCCAGATTATCTAAGGAAGATTATAGTGCAAGGCAGGTCTTCCAAGTCTACCAAAGTTGGGGATATCATGACTGAGGAGGTATAAACCTGTCACCTTTATATGACTCCAGCCTCAATTTTCCTATTAGTTGCATGTGCAATGATGGAATTTAGATGCTCATGTGGTTTTTTAAAATTTCTTTTTTATTTCCATTTTTTTTAATCAACTACCTTAATTTGCACATGTATATATGCATGTGTATACGGGTCACTATTATTCGTTTAATCTCGCCTCCATCTTACATCATAGCCACACAAAACATTGGAACATCGAATTTCAATGACAAATAGCTGCTTTGATTTGTGTTTGCAGAACAAACTTATCACTGTGACACCTGACACCAAGGTTTTGCGAGCTATGCAATTGATGACTGGTATTACAATACATTTTTTGGTTACATTGTTTAAAAAGTATTTCTAAAATTGCAATATTACCTTTTAACATTTCATAAACGTTTCAAAACTACCTTTGGAGTAGGATGGAAGTCGTGCCATGGAATGGTGTGATAAGTGACCTAAAACAGAAATTTGAATTGCTACACGGTTCTAAATCAACTTCACACTACTCACTGGCTGAGTTTTTGTCGATCTAAGAATAGTTTTGAAATGTTTATACCAGGTTATAAAGTAATATTGCAACTAATTTTTTTTTTTTTAATTTTTATAATTTTTATAATTTTTTTTATTTTTATTTTATTATAGTCCAATCTGCAATATATATTTTGATCACTGCACCATTTTTCTAATATAACCTGGAGATCTCATGCTGATGGACAGATAACCGAATTAGGCACATACCCGTCATCGACGACAAGGGCATGAAGGGCATGGTGTCAATTGGAGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGAGAGGAGCTGGACCGCCTGAATGCTTATATTCAGGGAGGTTATTGAGTTGCTGCTATTGACTTTGGTTGCTTGGTGTATGATGTTTCGAAACACCAGAATGCTTCAGCTCTTGTACATATGATGATGGCCTGGTATGCGCACTCTCTTATTAATATGGTCGTGCTTCCTGTTGCTTCTAGTACAATAACCGACGGATGTAATAATAGACGGTTACTTTGCTTTGCAAAATTACACCTGAATTTGCATTATCATTGATGGAGATGACAAA

mRNA sequence

AAAGAAAAAGAAATAATTGAGAGACAAAATCGGGTCTCACAGTTCCATTCCATGAGCTTCGCTTCGCTTAATCTTCCTTTAGGTCTCATTCTCCAAAACAGCTAACTCTTCCTCTTTCACTTTTTTTGGTTCTCAACCTCCTTCTTCAACCTACAGTTTTTCTTCCGGATCATCCTCAGTGCAACAGGTAAAGATGCAAGGTGCTGTGCGATCATTTCTGTCACATGGAAACGTTGTGAAAACTGCTGTTTTGCAACAAATTCGTGTAGCAAACCCCCATATGAGGCCTGCAATGCTTTCACGCTTTTCAACATCGGCTAGTTCTGTAAACATGGAAGAGCATGGCTTTGAAAGCACTACCATTGATGACATCTTGAAAGCTAAAGGCAAAAGTGCTGATGGATCTTGGCTTTGGTGCACCACAGAAGACACAGTCTATGATGCTGTTCAGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACCTGCGGAGCAAAATTCAATAGCTGGTATTATAACAGAGAGAGATAACCGAATTAGGCACATACCCGTCATCGACGACAAGGGCATGAAGGGCATGGTGTCAATTGGAGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGAGAGGAGCTGGACCGCCTGAATGCTTATATTCAGGGAGGTTATTGAGTTGCTGCTATTGACTTTGGTTGCTTGGTGTATGATGTTTCGAAACACCAGAATGCTTCAGCTCTTGTACATATGATGATGGCCTGGTATGCGCACTCTCTTATTAATATGGTCGTGCTTCCTGTTGCTTCTAGTACAATAACCGACGGATGTAATAATAGACGGTTACTTTGCTTTGCAAAATTACACCTGAATTTGCATTATCATTGATGGAGATGACAAA

Coding sequence (CDS)

ATGCAAGGTGCTGTGCGATCATTTCTGTCACATGGAAACGTTGTGAAAACTGCTGTTTTGCAACAAATTCGTGTAGCAAACCCCCATATGAGGCCTGCAATGCTTTCACGCTTTTCAACATCGGCTAGTTCTGTAAACATGGAAGAGCATGGCTTTGAAAGCACTACCATTGATGACATCTTGAAAGCTAAAGGCAAAAGTGCTGATGGATCTTGGCTTTGGTGCACCACAGAAGACACAGTCTATGATGCTGTTCAGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACCTGCGGAGCAAAATTCAATAGCTGGTATTATAACAGAGAGAGATAACCGAATTAGGCACATACCCGTCATCGACGACAAGGGCATGAAGGGCATGGTGTCAATTGGAGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGAGAGGAGCTGGACCGCCTGAATGCTTATATTCAGGGAGGTTATTGA

Protein sequence

MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITERDNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNAYIQGGY

Homology

[Close]

BLAST of ClCG02G018900 vs. NCBI nr
Match: XP_008456267.1 (PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis melo] >XP_008456268.1 PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis melo] >KAA0033548.1 CBS domain-containing protein CBSX3 [Cucumis melo var. makuwa] >TYJ95640.1 CBS domain-containing protein CBSX3 [Cucumis melo var. makuwa])

HSP 1 Score: 268.1 bits (684), Expect = 5.0e-68
Identity = 146/206 (70.87%), Postives = 148/206 (71.84%), Query Frame = 0


Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDI 60
           MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS N+EEHGFESTTIDDI
Sbjct: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 60

Query: 61  LKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITER------ 120
           LKAKGKSADGSWLWCTTED+VYDAVQS            KPAEQNSIAGIITER      
Sbjct: 61  LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120

Query: 121 ---------------------------------------DNRIRHIPVIDDKGMKGMVSI 162
                                                  DNRIRHIPVIDDKGMKGMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180

[Close]

BLAST of ClCG02G018900 vs. NCBI nr
Match: XP_004139921.3 (CBS domain-containing protein CBSX3, mitochondrial [Cucumis sativus] >KAE8646866.1 hypothetical protein Csa_020713 [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 1.4e-67
Identity = 145/206 (70.39%), Postives = 148/206 (71.84%), Query Frame = 0


Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDI 60
           MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS N+EEHGFESTTIDDI
Sbjct: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 60

Query: 61  LKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITER------ 120
           LKAKGKSADGSWLWCTTED+VYDAVQS            KPAEQNSIAGIITER      
Sbjct: 61  LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120

Query: 121 ---------------------------------------DNRIRHIPVIDDKGMKGMVSI 162
                                                  DNRIRHIPVID+KGMKGMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLLAMQLMTDNRIRHIPVIDEKGMKGMVSI 180

[Close]

BLAST of ClCG02G018900 vs. NCBI nr
Match: XP_038900356.1 (CBS domain-containing protein CBSX3, mitochondrial [Benincasa hispida] >XP_038900357.1 CBS domain-containing protein CBSX3, mitochondrial [Benincasa hispida])

HSP 1 Score: 262.3 bits (669), Expect = 2.7e-66
Identity = 141/206 (68.45%), Postives = 149/206 (72.33%), Query Frame = 0


Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDI 60
           MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS+N+EEHGFESTT+DDI
Sbjct: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSINIEEHGFESTTVDDI 60

Query: 61  LKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITER------ 120
           LKAKGKSADGSWLWCTTED+VYDAVQS            KPAEQNSIAGIITER      
Sbjct: 61  LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120

Query: 121 ---------------------------------------DNRIRHIPVIDDKGMKGMVSI 162
                                                  DNRIRHIPVI++KGM+GMVSI
Sbjct: 121 IVQGRSSKNTKVGDIMTEENKLITVTPDTKVLQAMELMTDNRIRHIPVINEKGMQGMVSI 180

[Close]

BLAST of ClCG02G018900 vs. NCBI nr
Match: XP_022986939.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima] >XP_022986940.1 CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 258.8 bits (660), Expect = 3.0e-65
Identity = 139/206 (67.48%), Postives = 147/206 (71.36%), Query Frame = 0


Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDI 60
           MQGAVRSFLSHGN+VKTAVLQQ+RVANP+MRPAMLSRF+TS SS N+EEHGFESTTIDDI
Sbjct: 1   MQGAVRSFLSHGNIVKTAVLQQLRVANPYMRPAMLSRFTTSTSSANIEEHGFESTTIDDI 60

Query: 61  LKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITER------ 120
           LKAKGKSADGSWLWCTT+DTVYDAVQS            KPAEQNSIAGIITER      
Sbjct: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120

Query: 121 ---------------------------------------DNRIRHIPVIDDKGMKGMVSI 162
                                                  DNRIRHIPVIDDKGMKGMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180

[Close]

BLAST of ClCG02G018900 vs. NCBI nr
Match: KAG6570609.1 (CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 139/206 (67.48%), Postives = 146/206 (70.87%), Query Frame = 0


Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDI 60
           MQGAVRSFLSHGN+VKTAVLQQ+RVANP MRPAMLSRF+TS SS N+EEHGFESTTIDDI
Sbjct: 46  MQGAVRSFLSHGNIVKTAVLQQLRVANPCMRPAMLSRFTTSTSSANIEEHGFESTTIDDI 105

Query: 61  LKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITER------ 120
           LKAKGKSADGSWLWCTT+DTVYDAVQS            KPAEQNSIAGIITER      
Sbjct: 106 LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 165

Query: 121 ---------------------------------------DNRIRHIPVIDDKGMKGMVSI 162
                                                  DNRIRHIPVIDDKGMKGMVSI
Sbjct: 166 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 225

[Close]

BLAST of ClCG02G018900 vs. ExPASy Swiss-Prot
Match: Q9LEV3 (CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CBSX3 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-50
Identity = 110/206 (53.40%), Postives = 125/206 (60.68%), Query Frame = 0


Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDI 60
           MQG +RSF+S GNVVK +VLQ +RV NP ++P++    S S     MEE GFESTTI D+
Sbjct: 1   MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEESGFESTTISDV 60

Query: 61  LKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITER------ 120
           +K+KGKSADGSWLWCTT+DTVYDAV+S            KP EQ ++AGIITER      
Sbjct: 61  MKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKI 120

Query: 121 ---------------------------------------DNRIRHIPVIDDKGMKGMVSI 162
                                                  DNRIRHIPVI DKGM GMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSI 180

[Close]

BLAST of ClCG02G018900 vs. ExPASy TrEMBL
Match: A0A1S3C2E8 (CBS domain-containing protein CBSX3, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496262 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.4e-68
Identity = 146/206 (70.87%), Postives = 148/206 (71.84%), Query Frame = 0


Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDI 60
           MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS N+EEHGFESTTIDDI
Sbjct: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 60

Query: 61  LKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITER------ 120
           LKAKGKSADGSWLWCTTED+VYDAVQS            KPAEQNSIAGIITER      
Sbjct: 61  LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120

Query: 121 ---------------------------------------DNRIRHIPVIDDKGMKGMVSI 162
                                                  DNRIRHIPVIDDKGMKGMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180

[Close]

BLAST of ClCG02G018900 vs. ExPASy TrEMBL
Match: A0A5A7SSJ5 (CBS domain-containing protein CBSX3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00650 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.4e-68
Identity = 146/206 (70.87%), Postives = 148/206 (71.84%), Query Frame = 0


Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDI 60
           MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS N+EEHGFESTTIDDI
Sbjct: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 60

Query: 61  LKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITER------ 120
           LKAKGKSADGSWLWCTTED+VYDAVQS            KPAEQNSIAGIITER      
Sbjct: 61  LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120

Query: 121 ---------------------------------------DNRIRHIPVIDDKGMKGMVSI 162
                                                  DNRIRHIPVIDDKGMKGMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180

[Close]

BLAST of ClCG02G018900 vs. ExPASy TrEMBL
Match: A0A6J1JHG9 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111484529 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.5e-65
Identity = 139/206 (67.48%), Postives = 147/206 (71.36%), Query Frame = 0


Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDI 60
           MQGAVRSFLSHGN+VKTAVLQQ+RVANP+MRPAMLSRF+TS SS N+EEHGFESTTIDDI
Sbjct: 1   MQGAVRSFLSHGNIVKTAVLQQLRVANPYMRPAMLSRFTTSTSSANIEEHGFESTTIDDI 60

Query: 61  LKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITER------ 120
           LKAKGKSADGSWLWCTT+DTVYDAVQS            KPAEQNSIAGIITER      
Sbjct: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120

Query: 121 ---------------------------------------DNRIRHIPVIDDKGMKGMVSI 162
                                                  DNRIRHIPVIDDKGMKGMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180

[Close]

BLAST of ClCG02G018900 vs. ExPASy TrEMBL
Match: A0A0A0KG88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G134340 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.5e-65
Identity = 145/226 (64.16%), Postives = 148/226 (65.49%), Query Frame = 0


Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDI 60
           MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS N+EEHGFESTTIDDI
Sbjct: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 60

Query: 61  LKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITER------ 120
           LKAKGKSADGSWLWCTTED+VYDAVQS            KPAEQNSIAGIITER      
Sbjct: 61  LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120

Query: 121 -----------------------------------------------------------D 162
                                                                      D
Sbjct: 121 IVQGRSSKSTKVGDIMTEEPHKTWERRMAMTICFGLCLQNKLITVTPDTKVLLAMQLMTD 180

[Close]

BLAST of ClCG02G018900 vs. ExPASy TrEMBL
Match: A0A6J1FUM7 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111448953 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.6e-65
Identity = 139/206 (67.48%), Postives = 146/206 (70.87%), Query Frame = 0


Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDI 60
           MQGAVRSFLSHGN+VKTAVLQQ+RVANP MRPAMLSRF+TS SS N+EEHGFESTTIDDI
Sbjct: 1   MQGAVRSFLSHGNIVKTAVLQQLRVANPCMRPAMLSRFTTSTSSANIEEHGFESTTIDDI 60

Query: 61  LKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITER------ 120
           LKAKGKSADGSWLWCTT+DTVYDAVQS            KPAEQNSIAGIITER      
Sbjct: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120

Query: 121 ---------------------------------------DNRIRHIPVIDDKGMKGMVSI 162
                                                  DNRIRHIPVIDDKGMKGMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180

[Close]

BLAST of ClCG02G018900 vs. TAIR 10
Match: AT5G10860.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 200.7 bits (509), Expect = 9.1e-52
Identity = 110/206 (53.40%), Postives = 125/206 (60.68%), Query Frame = 0


Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDI 60
           MQG +RSF+S GNVVK +VLQ +RV NP ++P++    S S     MEE GFESTTI D+
Sbjct: 1   MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEESGFESTTISDV 60

Query: 61  LKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITER------ 120
           +K+KGKSADGSWLWCTT+DTVYDAV+S            KP EQ ++AGIITER      
Sbjct: 61  MKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKI 120

Query: 121 ---------------------------------------DNRIRHIPVIDDKGMKGMVSI 162
                                                  DNRIRHIPVI DKGM GMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSI 180

[Close]

BLAST of ClCG02G018900 vs. TAIR 10
Match: AT1G47271.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 79.0 bits (193), Expect = 4.0e-15
Identity = 51/158 (32.28%), Postives = 70/158 (44.30%), Query Frame = 0


Query: 49  EHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIA 108
           E G E+ T+ D+L  K    D +W+ C T DTV DAV++            +P +Q  IA
Sbjct: 37  EKGLENLTVADVLSTKDTDID-TWISCRTNDTVSDAVKNMAKHNIGSLVVLEPGDQQYIA 96

Query: 109 GIITERD---------------------------------------------NRIRHIPV 162
           GI+TERD                                             N IRH+PV
Sbjct: 97  GIVTERDYMKKIIGAGRSSKLTKVGEVMTDESKLVTVSSGTNIIKAMQLMSENHIRHVPV 156

The following BLAST results are available for this feature:

BLAST of ClCG02G018900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456267.1	5.0e-68	70.87	PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis melo] >XP...	[more]
XP_004139921.3	1.4e-67	70.39	CBS domain-containing protein CBSX3, mitochondrial [Cucumis sativus] >KAE8646866...	[more]
XP_038900356.1	2.7e-66	68.45	CBS domain-containing protein CBSX3, mitochondrial [Benincasa hispida] >XP_03890...	[more]
XP_022986939.1	3.0e-65	67.48	CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima] >XP_0...	[more]
KAG6570609.1	1.1e-64	67.48	CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrospe...	[more]

BLAST of ClCG02G018900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEV3	1.3e-50	53.40	CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]

BLAST of ClCG02G018900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C2E8	2.4e-68	70.87	CBS domain-containing protein CBSX3, mitochondrial OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7SSJ5	2.4e-68	70.87	CBS domain-containing protein CBSX3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1JHG9	1.5e-65	67.48	CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita maxima OX=3...	[more]
A0A0A0KG88	1.5e-65	64.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G134340 PE=4 SV=1	[more]
A0A6J1FUM7	5.6e-65	67.48	CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita moschata OX...	[more]

BLAST of ClCG02G018900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10860.1	9.1e-52	53.40	Cystathionine beta-synthase (CBS) family protein	[more]
AT1G47271.1	4.0e-15	32.28	Cystathionine beta-synthase (CBS) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.580.10		coord: 114..160 e-value: 8.7E-12 score: 46.8
None	No IPR available	PANTHER	PTHR43080	CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL	coord: 1..115
None	No IPR available	PANTHER	PTHR43080:SF18	CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL-LIKE	coord: 1..115 coord: 115..161
None	No IPR available	PANTHER	PTHR43080	CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL	coord: 115..161
None	No IPR available	SUPERFAMILY	54631	CBS-domain pair	coord: 114..154
IPR000644	CBS domain	PROSITE	PS51371	CBS	coord: 68..149 score: 8.68361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G018900.2	ClCG02G018900.2	mRNA