![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
ClCG02G018760 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCTATGACCCTCCCTCCAGGGTTTCGCTTCCACCCAACAGATGAAGAACTTGTTGCTTATTATTTGGATAGAAAGATCAATGGACGTTCCATCGAGCTCGAGATCATTCCCGAGATCGATCTTTATAAGTGTGAACCTTGGGAATTACCCGGTAATGTTTCTTTGTTTTTCTTTGTCTTCGTCCCTCGTCTTCTTCGATTTTTCTTTCCTGAATGATTTAAATTTTTTTTAGATAAGTCGTTTTTGCCGAGCAAGGATATGGAGTGGTATTTCTATAGCCCTCGGGATCGAAAGTACCCGAATGGGTCGAGAACGAATCGGGCAACAAAGGGTGGATACTGGAAAGCCACTGGGAAAGACCGAGTGGTTCAGTCGCAGAAACGAGCAGTTGGGATGAAGAAGACTTTGGTGTATTATAAAGGAAGAGCTCCTCATGGAGTTAGAACCAATTGGGTTATGCATGAATATCGTCTTCTCCATTCTCAACTCGCCACGGGGACAACGTCGTCTCCTTCATCGAAGGTTTTTTCTTTTTCATCTTCATTTTTCAGTTAGGGTTTTTTTTTTTTTTTTTTTTTTTTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCATTTTTCCGTTAGGGTTTTTTTATTTTTTTTTTTTTTGTTAATTAATAATAAAAGTGTGTGGAAGGAAGAAGATGAAGAACAATAAACCTCACACCATCTAAAAAAGAAATTAAAGAGAGAGAAAAAAAACCCTAAAAGAAAAGGAAGAAGAAATATATCTGAAGTGTTTTCCTTTTTGGTTCTTTTTTTTTTTTTCTCTTCCCATCTTGAACTAAACCAAAAAGAAAAAGAACAAACATCAATAAGGGTTTATGAAAGACTCTTTGGTCATAACTTTAGATAGATGTGTGTACTTAATTTCCATCTCTTTTCTTAGGCTTTAGCCCTTTACCCTACATAACTATATATATCCCTTTCCTTTTTGTTAAAACTTGTTCCTCTTAAATTTCTACCTTTCATCATTGAAAAACCTACCAATTAGTTGAAAAACATCCCTCTTTTTGAATAATCTCTCTAATAAAATGATTAAGCCTGAAATTTAGGATAGAAATTCAAAGTATGTACACTTCCTTCTTGTACAAGTCATTTCAAATATTAACACAACACTCAAAACTATCTAAAATTATCTTTAAACCTAAAAGTTTAATTAAACCTATATAAGATTGCTTACGCAAAAGATGTGTTAACGTAGTTGAGATATCCAAATGCACGGTTCCTAATCTCTTTTTTATCCTCATAAATATAATATTTTGACATTGATACAGGACTCCTATGCATTGTGTCGTGTATTTAAGAAGGCAACTATAGTACCCAAATCCATTGGGGAGAAGGCAAATGGAGTTGATGTCGAAGCACCAGTGTGGCAAATGGCGGACGAGCAAGATATGCAGGTTGATGACGGCGGTGCACCGGAAAGTTCGAGAGGAGGGATAGAAAGCAATGAAGATGGTGATAGTTTTGATCACTTTCTTTATGAATATAACCCTAAAATCTTCAGCTCTGAAAACTCTTCCTCCGATCTCACACAAGGGAATGTTGCCGACGACTTGCCGGCTCCGGTGGCCTCCGATAACGAAGCCAATAGTTCAGCTAACAATCTGTATCCAATTCACATTGATTGCCCTTCAAATTTTATGCAGGTACTACTTCTAAACTCTCATCAATTATATAGTTCATATAATACTATCAAATTCAACCATTAATTTTTTTTTTTTTTTACAAAAATATTTATTATTTAATGTTATATATGGTTTCATGCATGCATACACGTACATTTTTAACCGATGATAGAAATCATCCTCAATCTCATTCTCACTTTTTTTAATTATCATTTCTTACCGTCTTCGAGTGCTAGACTAGCTTGTTTGTTAGGGTTTATTCATTAGGGTTTTAAAATATTTTGGAAGGGTTTTATTTTTCTTTGAATTTGGGTGTATGAAACCATTATTTTTAAATTCTCATTTAATTTTCATTAGCTAATCATATCTTTTTTGAAGAAATTTATCACAAATAATTGTTGATGAGAAACAAAACCATTCCATAACTATTTGAGATATATAAGAAAGAGACAATTCAGTATTTTCTAGTGAACTTAAATAGAAAGTTCATAAGTATATCACTTTATTTCAAAAACTTATTTAAAGTGATTTTTTTTTTCTTTTAAAGATAATTTTTCTGAGACATCACATCATTATTAGCAAGTTCCTCATCCCCCACTTATTTTGGTGAACTTCATTAAGCATCGTTGTGATTAACAATAATAACAACTCGCTTAATTACATTATTATTTTTCAAATAACTCATAATATCTCACTCATAAATATGCACTTATCTATGTAATTAATTTCAAGTTTATATCTTCACGTTTTAAAAGTTTCTATTTTAAGTTTAATCTCTTAATTTATTTTCGAATAAAACTATCTTTTCTTAACGTGAAAGAGTAAACTAAAAACAAAACAAACTAAATAGGTTAAAAAGACAAATTAAGATTTAAGACAGTGATTAGAAAATAAAAAACTTAAGAAGTTAAATGTTAAAAAAGTTGAAATCAACAACACATTTTGGACCATTTGAAAGATTTAGCCGTTATTATTTATGTATATTCTTTTTAATAAAGATTTAGCCGTTATTATAATAGTCTAAAGTAGTCTAATTTACTCTTTTTTTTTTCCCTTTAACGAGTTAATTAATTACTAGATTTTTTTTTTTTTTTTTAAAAAATCAAAACTAGTTATTAATTATTACTATAATCAAGATATTAAGTGTTGCACTAATCATGCATGGTGGTCACGTTCATGCACACTAAGAGAGAGCACATTGCATATATATATGAAATTTTGAATGGCCCACATTCACAAGCCCTTTGAGTTGTCTTTTTATCTTTAAAGTTTTTTTTTCTTTAAAAAAAAAAGTTTGAAGTAAATGAAATGACTATACACACACAATATCTTTTCCAAAAGCTTCTCCAAATCTTAATTTTTATCTCTTAGATTGACTCAAAAATGTCTCTCTTTTCACTATCCTCCATAACCCTCTTTTGACCAAACCCCTACCACTCATCTTTTCTTCCCTCATTTTCCTCTTAAAGTTTTTTTCTAAGATATATTACTATATAATTAAATAAATCAACAACACTATAACAACATATTAACCCCTAAAAAGCAATATTTAAAAGTTACTTCTTTATTTGTTTATTTTTAACCTTTAAGAAAATGTGTGTTTAATTGGTATCGTTAGATTGGATTTGTGTGAGAGACCCTTATGTTATTGGAAACAAACCTCAATCTGTTTAGTATATAATTAAGTTTGTGTTTATCATCTCAAAATTTCCAATTTGTTTGTTATTTCAAACTACATAAACTAGAACTTTATAAATTCACAAACGTATTAAACCCACAAATAAAATTATCTTACCTCTCTAATTCATAATTAAAATCACCCTACTTTGGATTTGGTTTGATAATGATATTATTTTTAGCTTTCTTTGTTTAATAATTACTTTCATTCCTCAATTTAAATACTTTCACATTCATTACTATGCTTATAAAATCCATTTGATAACGATTTCATTTGTAGTTTTTCGTTTTTGAAATTTATACTTATTTCCTCTCCAATTCTCTATTACGATACTCAACTACCTAAAAATAACACACTTGAGTTCTTAATGACTAAATTCTAAAAGAAGAAAAAGTTTTTGAAAACTATTTTTTTTCAAGACTAAATTTTGTTTTTGAAAATATTAGTAGAAAGTGAATAACAAATACTTAGTTAATTTGAAGCCAAAAACAATACCAACAAACCAACCCTTTAAACATTTTGATTACATATGCCGTGAGTATTCAAATATTTGACCTCTTAGTCAAAGATACATACCTTAACTAGTCGAGTTATACTTTCATGAATTGAAACAATGATATCTATGATCTTTTATCTAACATATATATGGAAATGCATATATTTTGTAGATACAGAGCAATTTCATCGACCACGAGAATCTTCACTATCAACACCCTTACTATCCGCCATTAGAGCTCGAGGACTTCCCTCAGCTGAACATAATAGGGGAAACGAAGTCGTCAATGAAGCCCGAGTGCATTGACGAGTACATGAAGTTCGATAAGTTCAGAGACTCCATGAATGGAAGTTTAGAGGAGATTTTATCTCTTTGTAGTCTTCCCAATATGCAAGAAGATAATCATAATCTCCAACACTCTACCTTATTACAGTAA ATGGCTCCTATGACCCTCCCTCCAGGGTTTCGCTTCCACCCAACAGATGAAGAACTTGTTGCTTATTATTTGGATAGAAAGATCAATGGACGTTCCATCGAGCTCGAGATCATTCCCGAGATCGATCTTTATAAGTGTGAACCTTGGGAATTACCCGATAAGTCGTTTTTGCCGAGCAAGGATATGGAGTGGTATTTCTATAGCCCTCGGGATCGAAAGTACCCGAATGGGTCGAGAACGAATCGGGCAACAAAGGGTGGATACTGGAAAGCCACTGGGAAAGACCGAGTGGTTCAGTCGCAGAAACGAGCAGTTGGGATGAAGAAGACTTTGGTGTATTATAAAGGAAGAGCTCCTCATGGAGTTAGAACCAATTGGGTTATGCATGAATATCGTCTTCTCCATTCTCAACTCGCCACGGGGACAACGTCGTCTCCTTCATCGAAGGACTCCTATGCATTGTGTCGTGTATTTAAGAAGGCAACTATAGTACCCAAATCCATTGGGGAGAAGGCAAATGGAGTTGATGTCGAAGCACCAGTGTGGCAAATGGCGGACGAGCAAGATATGCAGGTTGATGACGGCGGTGCACCGGAAAGTTCGAGAGGAGGGATAGAAAGCAATGAAGATGGTGATAGTTTTGATCACTTTCTTTATGAATATAACCCTAAAATCTTCAGCTCTGAAAACTCTTCCTCCGATCTCACACAAGGGAATGTTGCCGACGACTTGCCGGCTCCGGTGGCCTCCGATAACGAAGCCAATAGTTCAGCTAACAATCTGTATCCAATTCACATTGATTGCCCTTCAAATTTTATGCAGATACAGAGCAATTTCATCGACCACGAGAATCTTCACTATCAACACCCTTACTATCCGCCATTAGAGCTCGAGGACTTCCCTCAGCTGAACATAATAGGGGAAACGAAGTCGTCAATGAAGCCCGAGTGCATTGACGAGTACATGAAGTTCGATAAGTTCAGAGACTCCATGAATGGAAGTTTAGAGGAGATTTTATCTCTTTGTAGTCTTCCCAATATGCAAGAAGATAATCATAATCTCCAACACTCTACCTTATTACAGTAA ATGGCTCCTATGACCCTCCCTCCAGGGTTTCGCTTCCACCCAACAGATGAAGAACTTGTTGCTTATTATTTGGATAGAAAGATCAATGGACGTTCCATCGAGCTCGAGATCATTCCCGAGATCGATCTTTATAAGTGTGAACCTTGGGAATTACCCGATAAGTCGTTTTTGCCGAGCAAGGATATGGAGTGGTATTTCTATAGCCCTCGGGATCGAAAGTACCCGAATGGGTCGAGAACGAATCGGGCAACAAAGGGTGGATACTGGAAAGCCACTGGGAAAGACCGAGTGGTTCAGTCGCAGAAACGAGCAGTTGGGATGAAGAAGACTTTGGTGTATTATAAAGGAAGAGCTCCTCATGGAGTTAGAACCAATTGGGTTATGCATGAATATCGTCTTCTCCATTCTCAACTCGCCACGGGGACAACGTCGTCTCCTTCATCGAAGGACTCCTATGCATTGTGTCGTGTATTTAAGAAGGCAACTATAGTACCCAAATCCATTGGGGAGAAGGCAAATGGAGTTGATGTCGAAGCACCAGTGTGGCAAATGGCGGACGAGCAAGATATGCAGGTTGATGACGGCGGTGCACCGGAAAGTTCGAGAGGAGGGATAGAAAGCAATGAAGATGGTGATAGTTTTGATCACTTTCTTTATGAATATAACCCTAAAATCTTCAGCTCTGAAAACTCTTCCTCCGATCTCACACAAGGGAATGTTGCCGACGACTTGCCGGCTCCGGTGGCCTCCGATAACGAAGCCAATAGTTCAGCTAACAATCTGTATCCAATTCACATTGATTGCCCTTCAAATTTTATGCAGATACAGAGCAATTTCATCGACCACGAGAATCTTCACTATCAACACCCTTACTATCCGCCATTAGAGCTCGAGGACTTCCCTCAGCTGAACATAATAGGGGAAACGAAGTCGTCAATGAAGCCCGAGTGCATTGACGAGTACATGAAGTTCGATAAGTTCAGAGACTCCATGAATGGAAGTTTAGAGGAGATTTTATCTCTTTGTAGTCTTCCCAATATGCAAGAAGATAATCATAATCTCCAACACTCTACCTTATTACAGTAA MAPMTLPPGFRFHPTDEELVAYYLDRKINGRSIELEIIPEIDLYKCEPWELPDKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATKGGYWKATGKDRVVQSQKRAVGMKKTLVYYKGRAPHGVRTNWVMHEYRLLHSQLATGTTSSPSSKDSYALCRVFKKATIVPKSIGEKANGVDVEAPVWQMADEQDMQVDDGGAPESSRGGIESNEDGDSFDHFLYEYNPKIFSSENSSSDLTQGNVADDLPAPVASDNEANSSANNLYPIHIDCPSNFMQIQSNFIDHENLHYQHPYYPPLELEDFPQLNIIGETKSSMKPECIDEYMKFDKFRDSMNGSLEEILSLCSLPNMQEDNHNLQHSTLLQ Homology
BLAST of ClCG02G018760 vs. NCBI nr
Match: XP_038902529.1 (NAC domain-containing protein 96 [Benincasa hispida]) HSP 1 Score: 706.4 bits (1822), Expect = 1.2e-199 Identity = 346/363 (95.32%), Postives = 353/363 (97.25%), Query Frame = 0
BLAST of ClCG02G018760 vs. NCBI nr
Match: KAA0054712.1 (NAC domain-containing protein 76 [Cucumis melo var. makuwa]) HSP 1 Score: 695.3 bits (1793), Expect = 2.8e-196 Identity = 340/365 (93.15%), Postives = 352/365 (96.44%), Query Frame = 0
BLAST of ClCG02G018760 vs. NCBI nr
Match: XP_008456283.1 (PREDICTED: NAC domain-containing protein 76 [Cucumis melo]) HSP 1 Score: 695.3 bits (1793), Expect = 2.8e-196 Identity = 340/365 (93.15%), Postives = 352/365 (96.44%), Query Frame = 0
BLAST of ClCG02G018760 vs. NCBI nr
Match: XP_011656972.1 (NAC domain-containing protein 96 [Cucumis sativus] >KGN46789.1 hypothetical protein Csa_020988 [Cucumis sativus]) HSP 1 Score: 694.5 bits (1791), Expect = 4.8e-196 Identity = 342/365 (93.70%), Postives = 353/365 (96.71%), Query Frame = 0
BLAST of ClCG02G018760 vs. NCBI nr
Match: XP_023533360.1 (NAC domain-containing protein 96-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 651.4 bits (1679), Expect = 4.7e-183 Identity = 319/361 (88.37%), Postives = 337/361 (93.35%), Query Frame = 0
BLAST of ClCG02G018760 vs. ExPASy Swiss-Prot
Match: Q9FFI5 (NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 2.1e-69 Identity = 122/166 (73.49%), Postives = 139/166 (83.73%), Query Frame = 0
BLAST of ClCG02G018760 vs. ExPASy Swiss-Prot
Match: A4VCM0 (NAC domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=NAC045 PE=2 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.8e-68 Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 0
BLAST of ClCG02G018760 vs. ExPASy Swiss-Prot
Match: O49697 (NAC domain-containing protein 71 OS=Arabidopsis thaliana OX=3702 GN=NAC071 PE=2 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 3.5e-56 Identity = 107/166 (64.46%), Postives = 124/166 (74.70%), Query Frame = 0
BLAST of ClCG02G018760 vs. ExPASy Swiss-Prot
Match: Q9LS24 (NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.3e-55 Identity = 102/164 (62.20%), Postives = 122/164 (74.39%), Query Frame = 0
BLAST of ClCG02G018760 vs. ExPASy Swiss-Prot
Match: Q949N0 (NAC domain-containing protein 53 OS=Arabidopsis thaliana OX=3702 GN=NAC053 PE=2 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.4e-52 Identity = 132/315 (41.90%), Postives = 175/315 (55.56%), Query Frame = 0
BLAST of ClCG02G018760 vs. ExPASy TrEMBL
Match: A0A5A7UFZ1 (NAC domain-containing protein 76 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G005390 PE=4 SV=1) HSP 1 Score: 695.3 bits (1793), Expect = 1.4e-196 Identity = 340/365 (93.15%), Postives = 352/365 (96.44%), Query Frame = 0
BLAST of ClCG02G018760 vs. ExPASy TrEMBL
Match: A0A1S3C450 (NAC domain-containing protein 76 OS=Cucumis melo OX=3656 GN=LOC103496277 PE=4 SV=1) HSP 1 Score: 695.3 bits (1793), Expect = 1.4e-196 Identity = 340/365 (93.15%), Postives = 352/365 (96.44%), Query Frame = 0
BLAST of ClCG02G018760 vs. ExPASy TrEMBL
Match: A0A0A0KD62 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G135450 PE=4 SV=1) HSP 1 Score: 694.5 bits (1791), Expect = 2.3e-196 Identity = 342/365 (93.70%), Postives = 353/365 (96.71%), Query Frame = 0
BLAST of ClCG02G018760 vs. ExPASy TrEMBL
Match: A0A6J1L728 (NAC domain-containing protein 96-like OS=Cucurbita maxima OX=3661 GN=LOC111499763 PE=4 SV=1) HSP 1 Score: 649.8 bits (1675), Expect = 6.6e-183 Identity = 320/361 (88.64%), Postives = 336/361 (93.07%), Query Frame = 0
BLAST of ClCG02G018760 vs. ExPASy TrEMBL
Match: A0A6J1G673 (NAC domain-containing protein 96 OS=Cucurbita moschata OX=3662 GN=LOC111451235 PE=4 SV=1) HSP 1 Score: 649.4 bits (1674), Expect = 8.6e-183 Identity = 319/361 (88.37%), Postives = 336/361 (93.07%), Query Frame = 0
BLAST of ClCG02G018760 vs. TAIR 10
Match: AT1G54330.1 (NAC domain containing protein 20 ) HSP 1 Score: 322.4 bits (825), Expect = 4.6e-88 Identity = 184/344 (53.49%), Postives = 228/344 (66.28%), Query Frame = 0
BLAST of ClCG02G018760 vs. TAIR 10
Match: AT1G65910.1 (NAC domain containing protein 28 ) HSP 1 Score: 265.0 bits (676), Expect = 8.8e-71 Identity = 126/174 (72.41%), Postives = 143/174 (82.18%), Query Frame = 0
BLAST of ClCG02G018760 vs. TAIR 10
Match: AT5G17260.1 (NAC domain containing protein 86 ) HSP 1 Score: 264.2 bits (674), Expect = 1.5e-70 Identity = 122/166 (73.49%), Postives = 139/166 (83.73%), Query Frame = 0
BLAST of ClCG02G018760 vs. TAIR 10
Match: AT3G03200.1 (NAC domain containing protein 45 ) HSP 1 Score: 261.2 bits (666), Expect = 1.3e-69 Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 0
BLAST of ClCG02G018760 vs. TAIR 10
Match: AT3G17730.1 (NAC domain containing protein 57 ) HSP 1 Score: 259.6 bits (662), Expect = 3.7e-69 Identity = 124/172 (72.09%), Postives = 140/172 (81.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|