ClCG02G018340 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAATTTTTGCAGCCGGCTTCAATTTCTGTGAGCAACCACAAAAGTTCCTTCAATTTCCCCTCATCTCTCCCCGTCTCTCCCTTGGGTGTATCCACTTCATTCTCTCCAGGGCTATTTGTCATTGCCCATTTTATTCACTGCTCGGGAAATTACAACTCCGCTTCGAAATTGTGACATTCATTCTCAAATTTCTTTTATTCCCTATAATTTCCATTATCTCTTCATCTCTTTCTTTCTTTTTTTCCTTTGAGAAATGTTTCTCTCGTTCATCATGTGTTGCAGTCAAGGGGCTAACAGGAAAAATAAAATTGGTTAAAATCGAACCGAGCCGGCCAAAACCGAAATTGACTAGTTCGGTTTTTAATCGAAACCAAGGGGCTTCGATTTTTACCGGTTTCTGCCCTATCAGAACCGAGGTATTCGGTTTGGTCTCCGATTTTGGTCAAAACTGACCAAACCGAACGGTGTGCAACGAAGCCGAGCTTATTCCTCACCGTCCAAGAGAGCTTATGGAGAACTGTTTTGATCGGAAGGTAGAAGAGAGAAATGGTATATATACAATACACATGTAAAAGAATAATAAGCGGTTATAAAGAATTACTAATATTCTAACAAATAATAATAAACTATCAAACTAACTTCTAATAAACTTCGCTCTCTTTTCACAAAGTATAGTTCTTGGGAGATAATTACTTTCCTCGAATTCTCTTCAAACATACAAAATGCGTAAATCTACGAATTTTTTATAATTTATGACATTTTTGAAGTCTCATTAATCCATAACAGTTTTTAAATATCATTAGATATAAATATTATTTTTTAATTATAATTTTATTTTTCTTGATTAGATATCTTTTCGTTTTTTTTCCTTTTTTTTTTTTTTTTTTGTTTTCTTAGAGCTCGAAGAACCTCAAGCTATGCTCTCTTATATCATTTTTGTTGATTTCTAGTTTTTCTGGCTTATTTCAACACTAAGCCATGCTTATGGTTCTTAAATTCTTGAATTCAAACACTTTTTGCAATTATAAATACTGGTTTACTTGTTTGTCGAATTAAAATACCCTTTCATTGTTGTTATTTCAAAGTTTGTACTTCACTCATGTGTGAACCTTTCATTCAAATTATTATTTTGAGTTAATCCTATGATTAAAGTTTGAATTTAAACTTTTTTTTCATTATTTTTTTGTTTCTTAACCAGTGACAAAGATAAAAAGTAATAGTATGCTTGAAAATGAAAAATTATGATTGTCAGTAATTATTTATTGTTGACAATTAGTGATTGTCATAAATATCATTAAAGCTCTTGGGCGATACAATGAGTGAAAATAATTGTCACAAATTTTAAATTGAAAATTTTTAAGTATCCCAATTTTATTCTAGTGAGTGGTAGAGAGATTCAAACATACATATAAATATTAAAGAATAAACATGTAAAACACAAAAGTAATTTAGGACACATTAAATAAAGTATTGAATTAAATAATCATGGTGTCATTACCATAATATAAAATGCTAAATATAAAACTAAATAAATAAATAAAAACTTAAAGTTTGCTATTTGATTACACGAAGTTGCAATCTTATCTTTGAACTTTAATAAATATTTCAAAAATATAAATCCATTAGAATGTTTCACATAAAAAAAACAATGTGGCAATGACCAAGAACAGTGTGGTGTTGACTAAGACGTTTGCTTAGATTAAACTTAAAAGAATAGATTCAGACATGTCAAATTTTCTTATAACATTTTAACAGTTTTTCTATTCAAATAGTAGTTTTGAAACATTGATGAAATGTCAAAAGTAATATTGCAACTTTTGAAAGAACAGAAATATTTTCTTAAATGAAAGCCAAAGGTTAATCATATTTATAGATTCATTAATAATAGTTTATAGTCAACTTATTATTTAGTGGGTAACTAAAACTAATTGTATGGTTTATAAATATGGTATTAAACATTTTTTTTTTAATTAAAACCAATTTTTAGAATTGTTACCAAACACATATATGAAAATATGAAATACAAATCTATTTTCAGTAAATCTCTTAAATTTAAATTTATGTTTTCAAATTCTCTATCAAACAAGGTTGGAAAACCTCAAAGAAGTAATGAAGGTAAAAAGGAAAGAGAAGAAAAGGGAAGGTATATATCTACAGAGACCTTTGTGACTATATATGCAAGTTGGAAAGGTTAAAAAGCATGGAAAGGAATGGAGGGAACAGTTCCTTTATATTCTTCTACTTTCCTTTTTTTATTTTTTTATTTTTTATTTTTTATTTTTTTTATTTTTCTTTTGTTTTTCCATGCATTGATTGACTTCCTTTGAAAATTTTGGATTTTGCTTGTTGTGTAGGTAAAGAAGAACACCTGGAACAGACATTCTTTACCTTGCTTAATTATTCACCTCCAGAATTATTGCACTTGCTTATGTATATAATATACGTACCCAAACTTTCCCTTCATTCATTTTCATTATCTTCAAAGAACAACTACTCCAACACAGAGATGGGTATTCTTGGAGCTATGGCTAAACATTTGGATGCAATTATTGGGTACTCTCAAAACCCAAATATTTTGTTGTTTATGATCTCATTGTTTTTCTCAATGAATTTAAACTTTTTTCTTTTGATTCAGGCCTGGTGTTATGCTTCTTTTTCCTTTGTAAGTGCACATAACCCATTTGCATTATTATATATTTCTCTCCTATTCCATGGTTTCAAGACATGATTTATTGAAGGTTATACATATGGATATGAACAGATATGCATCAATTAGAGCAATTGAGAGTCCTTCAAGTCTTGATGACCAGCAATGGCTTACTTATTGGGTTATATACTCTCTTATAACCCTCTTTGAACTAACATTTTGGAAGATTCTGGTTTGGTATAATTCTACACAAAAACTATTCTTTCTTTTTCTTCTTCAAGTTTTTAGTTTTCAAAGGGAATTATTGGCATACAGGATTCCACTTTGGGGATACATTAAGCTAGTGGCTTGTTTGTGGTTGGTTCTACCAATTTTCAATGGGGCAGCTTATATCTATGAGAATATAGTGAGGAAATATGTTAAGATTGGAAGATATGTTAATCCAAACTATCCAGAGAATCAAAAGAAAGTACTTCAGATGATGACTTTGGATTCTAGGAAATCTGTGGAGCGTTACATCGATAGATATGGACCGGATGCTTTTGAAAGAGTTGTAAAAGCTGTAAGCTGTCGCTATTTCTATCGGTATTTTGTTGCTATGATGTGTATAGGTATCTATGATGTTAATCCTGACAAGACTTGATTTTGTAGGCTGAAAGAGAAGCAAGGAAACACTGAGACGAAATCCTTCTACGATGAAGTTGAAGAATCATGGATGATTTAATATTTATAAGGCTGGAGAAAGGTTTGTTGGGATTGTATTTGTTAGTACGATTTCATGTTGTGTACTTTGTGTATTTATGTATTATGCACAAGAGGGAAAACAATTGTGGGTTTTTTTTTTTTTTTTTCTGTGTGGATAATAGCTGTAAAGAAAAAGAGTTTCTAACGAATAATAATGTTCTTCTAAAC CTAATTTTTGCAGCCGGCTTCAATTTCTGTGAGCAACCACAAAAGTTCCTTCAATTTCCCCTCATCTCTCCCCGTCTCTCCCTTGGGTGTATCCACTTCATTCTCTCCAGGGCTATTTGTCATTGCCCATTTTATTCACTGCTCGGGAAATTACAACTCCGCTTCGAAATTGTGACATTCATTCTCAAATTTCTTTTATTCCCTATAATTTCCATTATCTCTTCATCTCTTTCTTTCTTTTTTTCCTTTGAGAAATGTTTCTCTCGTTCATCATGTGTTGCAGTCAAGGGGCTAACAGGAAAAATAAAATTGGTTAAAATCGAACCGAGCCGGCCAAAACCGAAATTGACTAGTTCGGTTTTTAATCGAAACCAAGGGGCTTCGATTTTTACCGGTTTCTGCCCTATCAGAACCGAGGTATTCGGTTTGGTCTCCGATTTTGGTCAAAACTGACCAAACCGAACGGTGTGCAACGAAGCCGAGCTTATTCCTCACCGTCCAAGAGAGCTTATGGAGAACTGTTTTGATCGGAAGGTTGGAAAACCTCAAAGAAGTAATGAAGGTAAAAAGGAAAGAGAAGAAAAGGGAAGGTAAAGAAGAACACCTGGAACAGACATTCTTTACCTTGCTTAATTATTCACCTCCAGAATTATTGCACTTGCTTATGTATATAATATACGTACCCAAACTTTCCCTTCATTCATTTTCATTATCTTCAAAGAACAACTACTCCAACACAGAGATGGGTATTCTTGGAGCTATGGCTAAACATTTGGATGCAATTATTGGGCCTGGTGTTATGCTTCTTTTTCCTTTATATGCATCAATTAGAGCAATTGAGAGTCCTTCAAGTCTTGATGACCAGCAATGGCTTACTTATTGGGTTATATACTCTCTTATAACCCTCTTTGAACTAACATTTTGGAAGATTCTGGTTTGGATTCCACTTTGGGGATACATTAAGCTAGTGGCTTGTTTGTGGTTGGTTCTACCAATTTTCAATGGGGCAGCTTATATCTATGAGAATATAGTGAGGAAATATGTTAAGATTGGAAGATATGTTAATCCAAACTATCCAGAGAATCAAAAGAAAGTACTTCAGATGATGACTTTGGATTCTAGGAAATCTGTGGAGCGTTACATCGATAGATATGGACCGGATGCTTTTGAAAGAGTTGTAAAAGCTGTAAGCTGTCGCTATTTCTATCGGCTGAAAGAGAAGCAAGGAAACACTGAGACGAAATCCTTCTACGATGAAGTTGAAGAATCATGGATGATTTAATATTTATAAGGCTGGAGAAAGGTTTGTTGGGATTGTATTTGTTAGTACGATTTCATGTTGTGTACTTTGTGTATTTATGTATTATGCACAAGAGGGAAAACAATTGTGGGTTTTTTTTTTTTTTTTTCTGTGTGGATAATAGCTGTAAAGAAAAAGAGTTTCTAACGAATAATAATGTTCTTCTAAAC ATGTATATAATATACGTACCCAAACTTTCCCTTCATTCATTTTCATTATCTTCAAAGAACAACTACTCCAACACAGAGATGGGTATTCTTGGAGCTATGGCTAAACATTTGGATGCAATTATTGGGCCTGGTGTTATGCTTCTTTTTCCTTTATATGCATCAATTAGAGCAATTGAGAGTCCTTCAAGTCTTGATGACCAGCAATGGCTTACTTATTGGGTTATATACTCTCTTATAACCCTCTTTGAACTAACATTTTGGAAGATTCTGGTTTGGATTCCACTTTGGGGATACATTAAGCTAGTGGCTTGTTTGTGGTTGGTTCTACCAATTTTCAATGGGGCAGCTTATATCTATGAGAATATAGTGAGGAAATATGTTAAGATTGGAAGATATGTTAATCCAAACTATCCAGAGAATCAAAAGAAAGTACTTCAGATGATGACTTTGGATTCTAGGAAATCTGTGGAGCGTTACATCGATAGATATGGACCGGATGCTTTTGAAAGAGTTGTAAAAGCTGTAAGCTGTCGCTATTTCTATCGGCTGAAAGAGAAGCAAGGAAACACTGAGACGAAATCCTTCTACGATGAAGTTGAAGAATCATGGATGATTTAA MYIIYVPKLSLHSFSLSSKNNYSNTEMGILGAMAKHLDAIIGPGVMLLFPLYASIRAIESPSSLDDQQWLTYWVIYSLITLFELTFWKILVWIPLWGYIKLVACLWLVLPIFNGAAYIYENIVRKYVKIGRYVNPNYPENQKKVLQMMTLDSRKSVERYIDRYGPDAFERVVKAVSCRYFYRLKEKQGNTETKSFYDEVEESWMI Homology
BLAST of ClCG02G018340 vs. NCBI nr
Match: XP_022970699.1 (HVA22-like protein f isoform X1 [Cucurbita maxima]) HSP 1 Score: 299.7 bits (766), Expect = 2.0e-77 Identity = 146/165 (88.48%), Postives = 156/165 (94.55%), Query Frame = 0
BLAST of ClCG02G018340 vs. NCBI nr
Match: XP_038902099.1 (HVA22-like protein f [Benincasa hispida]) HSP 1 Score: 298.9 bits (764), Expect = 3.4e-77 Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of ClCG02G018340 vs. NCBI nr
Match: XP_008456366.1 (PREDICTED: HVA22-like protein f [Cucumis melo] >KAA0054566.1 HVA22-like protein f [Cucumis melo var. makuwa] >TYK20389.1 HVA22-like protein f [Cucumis melo var. makuwa]) HSP 1 Score: 295.0 bits (754), Expect = 4.8e-76 Identity = 145/148 (97.97%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of ClCG02G018340 vs. NCBI nr
Match: XP_004143182.1 (HVA22-like protein f [Cucumis sativus] >KGN47032.1 hypothetical protein Csa_020906 [Cucumis sativus]) HSP 1 Score: 292.7 bits (748), Expect = 2.4e-75 Identity = 144/148 (97.30%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of ClCG02G018340 vs. NCBI nr
Match: XP_023533999.1 (HVA22-like protein f isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 291.2 bits (744), Expect = 7.0e-75 Identity = 142/158 (89.87%), Postives = 151/158 (95.57%), Query Frame = 0
BLAST of ClCG02G018340 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 7.8e-53 Identity = 96/150 (64.00%), Postives = 125/150 (83.33%), Query Frame = 0
BLAST of ClCG02G018340 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.7e-31 Identity = 66/143 (46.15%), Postives = 97/143 (67.83%), Query Frame = 0
BLAST of ClCG02G018340 vs. ExPASy Swiss-Prot
Match: Q9S784 (HVA22-like protein c OS=Arabidopsis thaliana OX=3702 GN=HVA22C PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.8e-26 Identity = 63/158 (39.87%), Postives = 98/158 (62.03%), Query Frame = 0
BLAST of ClCG02G018340 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 119.4 bits (298), Expect = 4.8e-26 Identity = 61/108 (56.48%), Postives = 77/108 (71.30%), Query Frame = 0
BLAST of ClCG02G018340 vs. ExPASy Swiss-Prot
Match: Q07764 (Protein HVA22 OS=Hordeum vulgare OX=4513 GN=HVA22 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.8e-24 Identity = 54/116 (46.55%), Postives = 78/116 (67.24%), Query Frame = 0
BLAST of ClCG02G018340 vs. ExPASy TrEMBL
Match: A0A6J1I6E0 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469604 PE=3 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 9.5e-78 Identity = 146/165 (88.48%), Postives = 156/165 (94.55%), Query Frame = 0
BLAST of ClCG02G018340 vs. ExPASy TrEMBL
Match: A0A5D3DA55 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold519G00090 PE=3 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76 Identity = 145/148 (97.97%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of ClCG02G018340 vs. ExPASy TrEMBL
Match: A0A1S3C319 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103496325 PE=3 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76 Identity = 145/148 (97.97%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of ClCG02G018340 vs. ExPASy TrEMBL
Match: A0A0A0KF72 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G176940 PE=3 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 1.2e-75 Identity = 144/148 (97.30%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of ClCG02G018340 vs. ExPASy TrEMBL
Match: A0A6J1G5R5 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111451142 PE=3 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 2.9e-74 Identity = 138/148 (93.24%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of ClCG02G018340 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 208.4 bits (529), Expect = 5.6e-54 Identity = 96/150 (64.00%), Postives = 125/150 (83.33%), Query Frame = 0
BLAST of ClCG02G018340 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 137.5 bits (345), Expect = 1.2e-32 Identity = 66/143 (46.15%), Postives = 97/143 (67.83%), Query Frame = 0
BLAST of ClCG02G018340 vs. TAIR 10
Match: AT1G69700.1 (HVA22 homologue C ) HSP 1 Score: 120.2 bits (300), Expect = 2.0e-27 Identity = 63/158 (39.87%), Postives = 98/158 (62.03%), Query Frame = 0
BLAST of ClCG02G018340 vs. TAIR 10
Match: AT5G62490.1 (HVA22 homologue B ) HSP 1 Score: 119.4 bits (298), Expect = 3.4e-27 Identity = 61/108 (56.48%), Postives = 77/108 (71.30%), Query Frame = 0
BLAST of ClCG02G018340 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 109.8 bits (273), Expect = 2.7e-24 Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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