ClCG02G018180 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGTTTCAAGACGACTGGCCCTTCTTTGCCTCGGAACAATCCTTCTCTGCTTCTTGTTCACTAGAGTTTCCGCCGCCGGATCCGAATACGGCGGCGACATTCACACCGTCAGGCACTCCTCCGACACCGCCGACTGCAATGGCGAACATCCCGACAAAGGCGACCAATGCAGGGAAGAAAACGACGTGGTTGAGGACGATGATTTCGACGACACCTACAAGATCGTCAACAACATCGCCGTAACCCTATCGGCGACCGGCAGTATACTTCAGGAGACGGAGGAATTGGACGATATCCCGGCTTCGGAGGAAGAGGTCGGCAACATGTTTATAGTGGGGCACTGA ATGGCTGTTTCAAGACGACTGGCCCTTCTTTGCCTCGGAACAATCCTTCTCTGCTTCTTGTTCACTAGAGTTTCCGCCGCCGGATCCGAATACGGCGGCGACATTCACACCGTCAGGCACTCCTCCGACACCGCCGACTGCAATGGCGAACATCCCGACAAAGGCGACCAATGCAGGGAAGAAAACGACGTGGTTGAGGACGATGATTTCGACGACACCTACAAGATCGTCAACAACATCGCCGTAACCCTATCGGCGACCGGCAGTATACTTCAGGAGACGGAGGAATTGGACGATATCCCGGCTTCGGAGGAAGAGGTCGGCAACATGTTTATAGTGGGGCACTGA ATGGCTGTTTCAAGACGACTGGCCCTTCTTTGCCTCGGAACAATCCTTCTCTGCTTCTTGTTCACTAGAGTTTCCGCCGCCGGATCCGAATACGGCGGCGACATTCACACCGTCAGGCACTCCTCCGACACCGCCGACTGCAATGGCGAACATCCCGACAAAGGCGACCAATGCAGGGAAGAAAACGACGTGGTTGAGGACGATGATTTCGACGACACCTACAAGATCGTCAACAACATCGCCGTAACCCTATCGGCGACCGGCAGTATACTTCAGGAGACGGAGGAATTGGACGATATCCCGGCTTCGGAGGAAGAGGTCGGCAACATGTTTATAGTGGGGCACTGA MAVSRRLALLCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVEDDDFDDTYKIVNNIAVTLSATGSILQETEELDDIPASEEEVGNMFIVGH Homology
BLAST of ClCG02G018180 vs. NCBI nr
Match: KAA0054503.1 (hypothetical protein E6C27_scaffold24G002830 [Cucumis melo var. makuwa] >TYK14536.1 hypothetical protein E5676_scaffold552G00150 [Cucumis melo var. makuwa]) HSP 1 Score: 177.9 bits (450), Expect = 4.8e-41 Identity = 94/117 (80.34%), Postives = 103/117 (88.03%), Query Frame = 0
BLAST of ClCG02G018180 vs. NCBI nr
Match: KAG6570557.1 (hypothetical protein SDJN03_29472, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 164.1 bits (414), Expect = 7.2e-37 Identity = 84/115 (73.04%), Postives = 96/115 (83.48%), Query Frame = 0
BLAST of ClCG02G018180 vs. NCBI nr
Match: KAE8646929.1 (hypothetical protein Csa_021071 [Cucumis sativus]) HSP 1 Score: 156.8 bits (395), Expect = 1.2e-34 Identity = 87/115 (75.65%), Postives = 97/115 (84.35%), Query Frame = 0
BLAST of ClCG02G018180 vs. NCBI nr
Match: KAG6604744.1 (hypothetical protein SDJN03_02061, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 105.5 bits (262), Expect = 3.1e-19 Identity = 60/93 (64.52%), Postives = 71/93 (76.34%), Query Frame = 0
BLAST of ClCG02G018180 vs. NCBI nr
Match: RXH90050.1 (hypothetical protein DVH24_032407 [Malus domestica]) HSP 1 Score: 83.6 bits (205), Expect = 1.2e-12 Identity = 55/118 (46.61%), Postives = 72/118 (61.02%), Query Frame = 0
BLAST of ClCG02G018180 vs. ExPASy TrEMBL
Match: A0A5D3CVV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00150 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.3e-41 Identity = 94/117 (80.34%), Postives = 103/117 (88.03%), Query Frame = 0
BLAST of ClCG02G018180 vs. ExPASy TrEMBL
Match: A0A0A0KGZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G169270 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 3.5e-37 Identity = 90/118 (76.27%), Postives = 100/118 (84.75%), Query Frame = 0
BLAST of ClCG02G018180 vs. ExPASy TrEMBL
Match: A0A2N9FLD3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15974 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.5e-13 Identity = 55/121 (45.45%), Postives = 77/121 (63.64%), Query Frame = 0
BLAST of ClCG02G018180 vs. ExPASy TrEMBL
Match: A0A498J3I4 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_032407 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 6.0e-13 Identity = 55/118 (46.61%), Postives = 72/118 (61.02%), Query Frame = 0
BLAST of ClCG02G018180 vs. ExPASy TrEMBL
Match: A0A540N9K5 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_006659 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 5.1e-12 Identity = 52/118 (44.07%), Postives = 72/118 (61.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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