ClCG02G016740 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G016740
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	PRA1 family protein
Location	CG_Chr02: 31245052 .. 31245690 (-)
RNA-Seq Expression	ClCG02G016740
Synteny	ClCG02G016740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCGGTTAAGTTCTCCGCCGGTTACGGTTCCGTTCCCTCTCCGGCCGCCGCCACGATCCCCACTTCTTCTGGAGCTTCACCATCTTTCCCCTCCAGTTCCTCCTTCCTCGAACGCGCCAAAACCACCACGCAATCCCTAATCGCCACACAGCGGCCATGGCGAGAGCTCTTCGATTTCTCCGCCTTCTCTCTTCCTTTAAGCTACGACGATGCCATGGCCAGAATCCGCCAGAATGTCAACTACTTCCGTGTTAATTACGCCTTGGTGATGCTCATCATCGTTTTCTTGAGCCTGTTTTGGCATCCGATTTCGATCATCGTCTTCTTGCTCGTCTTCGTCGCTTGGTTGTTCTTCTACTTCTTTCGCGATCAGCCTCTCGTTCTCTTCAACCAAACGTTCGATGATAAAGTTGTTTTGGGGGTTTTGAGCATTTTTACCATCATTGCTCTTGTTTCTACTGATGTGGGATCGAATGTTTTAGGAGCCCTAATTACAGGTGTGGCTGTGGTTGGACTACACGCGGCGTTTCGGATTACGGCGGATCATTTTCTCGATGAGGAGACCGCTGCAGAAGGGGGATTGCTGTCGGTGGTCGGAAATCAGCCACAACAACGAGGTTACACCCGGATTTGA

mRNA sequence

ATGTCATCGGTTAAGTTCTCCGCCGGTTACGGTTCCGTTCCCTCTCCGGCCGCCGCCACGATCCCCACTTCTTCTGGAGCTTCACCATCTTTCCCCTCCAGTTCCTCCTTCCTCGAACGCGCCAAAACCACCACGCAATCCCTAATCGCCACACAGCGGCCATGGCGAGAGCTCTTCGATTTCTCCGCCTTCTCTCTTCCTTTAAGCTACGACGATGCCATGGCCAGAATCCGCCAGAATGTCAACTACTTCCGTGTTAATTACGCCTTGGTGATGCTCATCATCGTTTTCTTGAGCCTGTTTTGGCATCCGATTTCGATCATCGTCTTCTTGCTCGTCTTCGTCGCTTGGTTGTTCTTCTACTTCTTTCGCGATCAGCCTCTCGTTCTCTTCAACCAAACGTTCGATGATAAAGTTGTTTTGGGGGTTTTGAGCATTTTTACCATCATTGCTCTTGTTTCTACTGATGTGGGATCGAATGTTTTAGGAGCCCTAATTACAGGTGTGGCTGTGGTTGGACTACACGCGGCGTTTCGGATTACGGCGGATCATTTTCTCGATGAGGAGACCGCTGCAGAAGGGGGATTGCTGTCGGTGGTCGGAAATCAGCCACAACAACGAGGTTACACCCGGATTTGA

Coding sequence (CDS)

ATGTCATCGGTTAAGTTCTCCGCCGGTTACGGTTCCGTTCCCTCTCCGGCCGCCGCCACGATCCCCACTTCTTCTGGAGCTTCACCATCTTTCCCCTCCAGTTCCTCCTTCCTCGAACGCGCCAAAACCACCACGCAATCCCTAATCGCCACACAGCGGCCATGGCGAGAGCTCTTCGATTTCTCCGCCTTCTCTCTTCCTTTAAGCTACGACGATGCCATGGCCAGAATCCGCCAGAATGTCAACTACTTCCGTGTTAATTACGCCTTGGTGATGCTCATCATCGTTTTCTTGAGCCTGTTTTGGCATCCGATTTCGATCATCGTCTTCTTGCTCGTCTTCGTCGCTTGGTTGTTCTTCTACTTCTTTCGCGATCAGCCTCTCGTTCTCTTCAACCAAACGTTCGATGATAAAGTTGTTTTGGGGGTTTTGAGCATTTTTACCATCATTGCTCTTGTTTCTACTGATGTGGGATCGAATGTTTTAGGAGCCCTAATTACAGGTGTGGCTGTGGTTGGACTACACGCGGCGTTTCGGATTACGGCGGATCATTTTCTCGATGAGGAGACCGCTGCAGAAGGGGGATTGCTGTCGGTGGTCGGAAATCAGCCACAACAACGAGGTTACACCCGGATTTGA

Protein sequence

MSSVKFSAGYGSVPSPAAATIPTSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAAEGGLLSVVGNQPQQRGYTRI

Homology

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BLAST of ClCG02G016740 vs. NCBI nr
Match: KAA0063596.1 (PRA1 family protein E [Cucumis melo var. makuwa] >TYK18431.1 PRA1 family protein E [Cucumis melo var. makuwa])

HSP 1 Score: 376.3 bits (965), Expect = 1.7e-100
Identity = 205/213 (96.24%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MSSVKFSAGYGSVPSPAAATIP-TSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKFS+GYG+VPSPAAATIP TSSGA P FPSSSSFLERAKTTTQSLIATQRPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP SYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180
           FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEETAAEGGLLSVVGNQPQQRGYTRI 213
           ITADHFLDEETAAEGGLLSVVGNQ QQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

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BLAST of ClCG02G016740 vs. NCBI nr
Match: XP_008456115.1 (PREDICTED: PRA1 family protein E [Cucumis melo] >XP_008456124.1 PREDICTED: PRA1 family protein E [Cucumis melo])

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-99
Identity = 204/213 (95.77%), Postives = 207/213 (97.18%), Query Frame = 0


Query: 1   MSSVKFSAGYGSVPSPAAATIP-TSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKFS+GYG+VPSPAAATIP TSSGA P FPSSSSFLERAKTTTQSLIAT RPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATLRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP SYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180
           FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEETAAEGGLLSVVGNQPQQRGYTRI 213
           ITADHFLDEETAAEGGLLSVVGNQ QQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

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BLAST of ClCG02G016740 vs. NCBI nr
Match: XP_004139244.1 (PRA1 family protein E [Cucumis sativus] >KGN60794.1 hypothetical protein Csa_019504 [Cucumis sativus])

HSP 1 Score: 372.5 bits (955), Expect = 2.5e-99
Identity = 203/213 (95.31%), Postives = 207/213 (97.18%), Query Frame = 0


Query: 1   MSSVKFSAGYGSVPSPAAATIP-TSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKFS+GYG+VPS AAATIP TSSGA PSFPSSSSFLERAKTTTQSLIATQRPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSQAAATIPTTSSGAPPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP SYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180
           FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGV VVGLH+AFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVTVVGLHSAFR 180

Query: 181 ITADHFLDEETAAEGGLLSVVGNQPQQRGYTRI 213
           ITADHFLDEETAAEGGLLSVVGNQ QQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

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BLAST of ClCG02G016740 vs. NCBI nr
Match: XP_038891239.1 (PRA1 family protein F3 [Benincasa hispida])

HSP 1 Score: 367.5 bits (942), Expect = 7.9e-98
Identity = 200/213 (93.90%), Postives = 203/213 (95.31%), Query Frame = 0


Query: 1   MSSVKFSAGYGSVPSPAAATIP-TSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60
           MSS KFS GYG+VPSPAAATIP TSSGA PS PSSSSFLERAK TTQSLIATQRPWRELF
Sbjct: 1   MSSAKFSTGYGAVPSPAAATIPTTSSGAPPSLPSSSSFLERAKITTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLPL+YDDAMARIRQNVNYFRVNYALVMLIIVF SLFWHP SIIVFLL+FVAW F
Sbjct: 61  DFSAFSLPLNYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPFSIIVFLLIFVAWFF 120

Query: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180
           FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEETAAEGGLLSVVGNQPQQRGYTRI 213
           ITADHFLDEETAAEGGLLSVVGNQ QQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

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BLAST of ClCG02G016740 vs. NCBI nr
Match: XP_022946131.1 (PRA1 family protein E [Cucurbita moschata] >KAG7030313.1 PRA1 family protein E, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347.1 bits (889), Expect = 1.1e-91
Identity = 192/213 (90.14%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 1   MSSVKFSAGYGSVPSPAAATIPTSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELFD 60
           MS VKFSAGYG+VPSPAA+   TS+G  PSFPSSSSFLERAK+TTQSLIAT+RPWRELFD
Sbjct: 1   MSPVKFSAGYGTVPSPAAS---TSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFD 60

Query: 61  FSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLFF 120
           FSAFSLP SYDDAMARIRQNV+YFRVNYALVMLIIVFLSLFWHPISIIVFLL+FV WLF 
Sbjct: 61  FSAFSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFC 120

Query: 121 YFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRI 180
           YF RDQPLVLFNQTFDDK+VLGVLSI TIIALVSTDVGSNVLGALITGVAVVGLHAAFRI
Sbjct: 121 YFLRDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRI 180

Query: 181 TADHFLDEETAAEGGLLSVVGN-QPQQRGYTRI 213
           TADHFLDEETAAEGGLLSVVGN Q QQRGYTRI
Sbjct: 181 TADHFLDEETAAEGGLLSVVGNQQQQQRGYTRI 210

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BLAST of ClCG02G016740 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.2e-42
Identity = 101/194 (52.06%), Postives = 134/194 (69.07%), Query Frame = 0


Query: 26  GASPSFPSSSSFL----ERAKTTTQSLIATQRPWRELFDFSAFSLPLSYDDAMARIRQNV 85
           G  PS  S+++ +     RAK TTQS+I T RPWRE+ D SA SLP  YD+AMA ++ N+
Sbjct: 17  GVGPSSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNI 76

Query: 86  NYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLFFYFFRD--QPLVLFNQTFDDKV 145
           +YFR NYAL +L IVFL L +HP+S+I F++VF+ W+  YF RD    +V+  +  DDK+
Sbjct: 77  SYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKI 136

Query: 146 VLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAAEGGLLSV 205
           VL +LS+ T++ALV TDVG NVL +LI G+ +VG H AFR T D FLDEE+A  GGL+S 
Sbjct: 137 VLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSA 196

Query: 206 -VGNQPQQRGYTRI 213
             GN+P    YT I
Sbjct: 197 GSGNRPPS-SYTPI 209

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BLAST of ClCG02G016740 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.6e-35
Identity = 84/171 (49.12%), Postives = 115/171 (67.25%), Query Frame = 0


Query: 21  IPTSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLSYDDAMARIRQN 80
           IPTSS ASP     S  L RAK   ++ +AT+R WR +FDF +  LP    DA  RI+ N
Sbjct: 7   IPTSSHASPLVDVES--LSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTN 66

Query: 81  VNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLFFYFFRDQPLVLFNQTFDDKVV 140
           + YFR+NYA+V+LI++F SL WHP S+IVF ++ V W+F YF RD+P+ LF    DD+ V
Sbjct: 67  LAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTV 126

Query: 141 LGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETA 192
           L VLS+ T++ L+ T+   N++GAL+TG  +V +H+  R T D FLDEE A
Sbjct: 127 LIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAA 175

[Close]

BLAST of ClCG02G016740 vs. ExPASy Swiss-Prot
Match: Q9C889 (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.9e-34
Identity = 84/181 (46.41%), Postives = 122/181 (67.40%), Query Frame = 0


Query: 21  IPTSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLSYDDAMARIRQN 80
           IPTSS  SP+      ++ RAK   +S +AT+RPW+ +FDF + +LP  + DA++RI+ N
Sbjct: 7   IPTSSHPSPAI--DLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTN 66

Query: 81  VNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLFFYFFRDQPLVLFNQTFDDKVV 140
           + YFR NYA+ +L I+FLSL +HP S+IV  ++ V W+F YF RD+PLV+F    DD+ V
Sbjct: 67  LGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTV 126

Query: 141 LGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAA---EGGLL 199
           L  LS+ T++ L+ T   SN+LG+L+T   +V +HAA R + + FLDEE AA     GL+
Sbjct: 127 LIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGLM 185

[Close]

BLAST of ClCG02G016740 vs. ExPASy Swiss-Prot
Match: Q9FLB6 (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.8e-31
Identity = 79/171 (46.20%), Postives = 111/171 (64.91%), Query Frame = 0


Query: 30  SFPSSSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLSYDDAMARIRQNVNYFRVNYA 89
           S P+  +FL R  ++ +  ++ +RPW EL D SA S P S  DA +RIR+N+ YF+VNY 
Sbjct: 25  STPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVNYV 84

Query: 90  LVMLIIVFLSLFWHPISIIVFLLVFVAWLFFYFFR--DQPLVLFNQTFDDKVVLGVLSIF 149
            ++ +++ LSL  HP S++V L +F AW+F Y FR  DQPLV+  +TF D+  LGVL I 
Sbjct: 85  TIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVIL 144

Query: 150 TIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAAEGGLLS 199
           TI+ +  T VGS +  AL+ G  +V LH AFR+  D FLD++  A  GLLS
Sbjct: 145 TIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDDQEPANTGLLS 195

[Close]

BLAST of ClCG02G016740 vs. ExPASy Swiss-Prot
Match: Q9SIY7 (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-29
Identity = 81/195 (41.54%), Postives = 120/195 (61.54%), Query Frame = 0


Query: 15  SPAAATIPTSSGASPSFPSSSS-----FLERAKTTTQSLIATQRPWRELFDFSAFSLPLS 74
           SPA   +     A+ S P  +S     FL R  ++ +  ++ +RPW EL D S+F+ P S
Sbjct: 4   SPAILPVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPDS 63

Query: 75  YDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLFFYFFR--DQP 134
             D+ +RIR+N+ YF+VNY+ ++ +++  SL  HP S++V L +  +W+F Y FR  DQP
Sbjct: 64  LTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQP 123

Query: 135 LVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLD 194
           LVLF ++F D+  L  L + TI+ +  T VGS +  AL  G+A+V LH AFR+  D FLD
Sbjct: 124 LVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLD 183

Query: 195 EETAAEGGLLSVVGN 203
           E+  A  GLLS +GN
Sbjct: 184 EQEPANAGLLSFIGN 198

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BLAST of ClCG02G016740 vs. ExPASy TrEMBL
Match: A0A5A7VAZ9 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001570 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.3e-101
Identity = 205/213 (96.24%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MSSVKFSAGYGSVPSPAAATIP-TSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKFS+GYG+VPSPAAATIP TSSGA P FPSSSSFLERAKTTTQSLIATQRPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP SYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180
           FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEETAAEGGLLSVVGNQPQQRGYTRI 213
           ITADHFLDEETAAEGGLLSVVGNQ QQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of ClCG02G016740 vs. ExPASy TrEMBL
Match: A0A1S3C2L3 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103496149 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.4e-100
Identity = 204/213 (95.77%), Postives = 207/213 (97.18%), Query Frame = 0


Query: 1   MSSVKFSAGYGSVPSPAAATIP-TSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKFS+GYG+VPSPAAATIP TSSGA P FPSSSSFLERAKTTTQSLIAT RPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATLRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP SYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180
           FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEETAAEGGLLSVVGNQPQQRGYTRI 213
           ITADHFLDEETAAEGGLLSVVGNQ QQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of ClCG02G016740 vs. ExPASy TrEMBL
Match: A0A0A0LIB9 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G010300 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.2e-99
Identity = 203/213 (95.31%), Postives = 207/213 (97.18%), Query Frame = 0


Query: 1   MSSVKFSAGYGSVPSPAAATIP-TSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKFS+GYG+VPS AAATIP TSSGA PSFPSSSSFLERAKTTTQSLIATQRPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSQAAATIPTTSSGAPPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP SYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180
           FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGV VVGLH+AFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVTVVGLHSAFR 180

Query: 181 ITADHFLDEETAAEGGLLSVVGNQPQQRGYTRI 213
           ITADHFLDEETAAEGGLLSVVGNQ QQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of ClCG02G016740 vs. ExPASy TrEMBL
Match: A0A6J1G2T7 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111450303 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.4e-92
Identity = 192/213 (90.14%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 1   MSSVKFSAGYGSVPSPAAATIPTSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELFD 60
           MS VKFSAGYG+VPSPAA+   TS+G  PSFPSSSSFLERAK+TTQSLIAT+RPWRELFD
Sbjct: 1   MSPVKFSAGYGTVPSPAAS---TSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFD 60

Query: 61  FSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLFF 120
           FSAFSLP SYDDAMARIRQNV+YFRVNYALVMLIIVFLSLFWHPISIIVFLL+FV WLF 
Sbjct: 61  FSAFSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFC 120

Query: 121 YFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRI 180
           YF RDQPLVLFNQTFDDK+VLGVLSI TIIALVSTDVGSNVLGALITGVAVVGLHAAFRI
Sbjct: 121 YFLRDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRI 180

Query: 181 TADHFLDEETAAEGGLLSVVGN-QPQQRGYTRI 213
           TADHFLDEETAAEGGLLSVVGN Q QQRGYTRI
Sbjct: 181 TADHFLDEETAAEGGLLSVVGNQQQQQRGYTRI 210

[Close]

BLAST of ClCG02G016740 vs. ExPASy TrEMBL
Match: A0A6J1KG44 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111493580 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91
Identity = 192/218 (88.07%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MSSVKFSAGYGSVPSPAAATIPTSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELFD 60
           MS VKFSAGYG+VPSPAA+   TS+G +PSFPSSSSFLERAK+TTQSLIAT+RPWRELFD
Sbjct: 1   MSPVKFSAGYGTVPSPAAS---TSAGVTPSFPSSSSFLERAKSTTQSLIATRRPWRELFD 60

Query: 61  FSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLFF 120
           FSAFSLP SYDDAMARIRQNV+YFRVNYALVMLIIVFLSLFWHPISIIVFLL+FV WLF 
Sbjct: 61  FSAFSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFC 120

Query: 121 YFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRI 180
           YF RDQPLVLFNQTFDDK+VLGVLSI TIIALVSTDVGSNVLGALITGVAVVGLHAAFRI
Sbjct: 121 YFLRDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRI 180

Query: 181 TADHFLDEETAAEGGLLSVVGN------QPQQRGYTRI 213
           TADHFLDEETAAEGGLLSVVGN      Q QQRGYTRI
Sbjct: 181 TADHFLDEETAAEGGLLSVVGNQQQQQQQQQQRGYTRI 215

[Close]

BLAST of ClCG02G016740 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E )

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-43
Identity = 101/194 (52.06%), Postives = 134/194 (69.07%), Query Frame = 0


Query: 26  GASPSFPSSSSFL----ERAKTTTQSLIATQRPWRELFDFSAFSLPLSYDDAMARIRQNV 85
           G  PS  S+++ +     RAK TTQS+I T RPWRE+ D SA SLP  YD+AMA ++ N+
Sbjct: 17  GVGPSSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNI 76

Query: 86  NYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLFFYFFRD--QPLVLFNQTFDDKV 145
           +YFR NYAL +L IVFL L +HP+S+I F++VF+ W+  YF RD    +V+  +  DDK+
Sbjct: 77  SYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKI 136

Query: 146 VLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAAEGGLLSV 205
           VL +LS+ T++ALV TDVG NVL +LI G+ +VG H AFR T D FLDEE+A  GGL+S 
Sbjct: 137 VLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSA 196

Query: 206 -VGNQPQQRGYTRI 213
             GN+P    YT I
Sbjct: 197 GSGNRPPS-SYTPI 209

[Close]

BLAST of ClCG02G016740 vs. TAIR 10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-36
Identity = 84/171 (49.12%), Postives = 115/171 (67.25%), Query Frame = 0


Query: 21  IPTSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLSYDDAMARIRQN 80
           IPTSS ASP     S  L RAK   ++ +AT+R WR +FDF +  LP    DA  RI+ N
Sbjct: 7   IPTSSHASPLVDVES--LSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTN 66

Query: 81  VNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLFFYFFRDQPLVLFNQTFDDKVV 140
           + YFR+NYA+V+LI++F SL WHP S+IVF ++ V W+F YF RD+P+ LF    DD+ V
Sbjct: 67  LAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTV 126

Query: 141 LGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETA 192
           L VLS+ T++ L+ T+   N++GAL+TG  +V +H+  R T D FLDEE A
Sbjct: 127 LIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAA 175

[Close]

BLAST of ClCG02G016740 vs. TAIR 10
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 146.0 bits (367), Expect = 3.5e-35
Identity = 84/181 (46.41%), Postives = 122/181 (67.40%), Query Frame = 0


Query: 21  IPTSSGASPSFPSSSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLSYDDAMARIRQN 80
           IPTSS  SP+      ++ RAK   +S +AT+RPW+ +FDF + +LP  + DA++RI+ N
Sbjct: 7   IPTSSHPSPAI--DLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTN 66

Query: 81  VNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLFFYFFRDQPLVLFNQTFDDKVV 140
           + YFR NYA+ +L I+FLSL +HP S+IV  ++ V W+F YF RD+PLV+F    DD+ V
Sbjct: 67  LGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTV 126

Query: 141 LGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAA---EGGLL 199
           L  LS+ T++ L+ T   SN+LG+L+T   +V +HAA R + + FLDEE AA     GL+
Sbjct: 127 LIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGLM 185

[Close]

BLAST of ClCG02G016740 vs. TAIR 10
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3 )

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-32
Identity = 79/171 (46.20%), Postives = 111/171 (64.91%), Query Frame = 0


Query: 30  SFPSSSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLSYDDAMARIRQNVNYFRVNYA 89
           S P+  +FL R  ++ +  ++ +RPW EL D SA S P S  DA +RIR+N+ YF+VNY 
Sbjct: 25  STPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVNYV 84

Query: 90  LVMLIIVFLSLFWHPISIIVFLLVFVAWLFFYFFR--DQPLVLFNQTFDDKVVLGVLSIF 149
            ++ +++ LSL  HP S++V L +F AW+F Y FR  DQPLV+  +TF D+  LGVL I 
Sbjct: 85  TIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVIL 144

Query: 150 TIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAAEGGLLS 199
           TI+ +  T VGS +  AL+ G  +V LH AFR+  D FLD++  A  GLLS
Sbjct: 145 TIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDDQEPANTGLLS 195

[Close]

BLAST of ClCG02G016740 vs. TAIR 10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2 )

HSP 1 Score: 131.3 bits (329), Expect = 8.9e-31
Identity = 81/195 (41.54%), Postives = 120/195 (61.54%), Query Frame = 0


Query: 15  SPAAATIPTSSGASPSFPSSSS-----FLERAKTTTQSLIATQRPWRELFDFSAFSLPLS 74
           SPA   +     A+ S P  +S     FL R  ++ +  ++ +RPW EL D S+F+ P S
Sbjct: 4   SPAILPVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPDS 63

Query: 75  YDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLVFVAWLFFYFFR--DQP 134
             D+ +RIR+N+ YF+VNY+ ++ +++  SL  HP S++V L +  +W+F Y FR  DQP
Sbjct: 64  LTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQP 123

Query: 135 LVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLD 194
           LVLF ++F D+  L  L + TI+ +  T VGS +  AL  G+A+V LH AFR+  D FLD
Sbjct: 124 LVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLD 183

Query: 195 EETAAEGGLLSVVGN 203
           E+  A  GLLS +GN
Sbjct: 184 EQEPANAGLLSFIGN 198

The following BLAST results are available for this feature:

BLAST of ClCG02G016740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063596.1	1.7e-100	96.24	PRA1 family protein E [Cucumis melo var. makuwa] >TYK18431.1 PRA1 family protein...	[more]
XP_008456115.1	1.1e-99	95.77	PREDICTED: PRA1 family protein E [Cucumis melo] >XP_008456124.1 PREDICTED: PRA1 ...	[more]
XP_004139244.1	2.5e-99	95.31	PRA1 family protein E [Cucumis sativus] >KGN60794.1 hypothetical protein Csa_019...	[more]
XP_038891239.1	7.9e-98	93.90	PRA1 family protein F3 [Benincasa hispida]	[more]
XP_022946131.1	1.1e-91	90.14	PRA1 family protein E [Cucurbita moschata] >KAG7030313.1 PRA1 family protein E, ...	[more]

BLAST of ClCG02G016740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FRR1	2.2e-42	52.06	PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1	[more]
Q9LIC6	2.6e-35	49.12	PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1	[more]
Q9C889	4.9e-34	46.41	PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1	[more]
Q9FLB6	1.8e-31	46.20	PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1	[more]
Q9SIY7	1.3e-29	41.54	PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1	[more]

BLAST of ClCG02G016740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VAZ9	8.3e-101	96.24	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G...	[more]
A0A1S3C2L3	5.4e-100	95.77	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103496149 PE=3 SV=1	[more]
A0A0A0LIB9	1.2e-99	95.31	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G010300 PE=3 SV=1	[more]
A0A6J1G2T7	5.4e-92	90.14	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111450303 PE=3 SV=1	[more]
A0A6J1KG44	1.2e-91	88.07	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111493580 PE=3 SV=1	[more]

BLAST of ClCG02G016740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08770.1	1.6e-43	52.06	prenylated RAB acceptor 1.E	[more]
AT3G13720.1	1.9e-36	49.12	PRA1 (Prenylated rab acceptor) family protein	[more]
AT1G55190.1	3.5e-35	46.41	PRA1 (Prenylated rab acceptor) family protein	[more]
AT5G05380.1	1.2e-32	46.20	prenylated RAB acceptor 1.B3	[more]
AT2G40380.1	8.9e-31	41.54	prenylated RAB acceptor 1.B2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 49..189 e-value: 3.3E-47 score: 159.7
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 29..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR19317:SF13	PRA1 FAMILY PROTEIN	coord: 29..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G016740.1	ClCG02G016740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane