ClCG02G013230 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G013230
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	zinc finger CCCH domain-containing protein 62-like
Location	CG_Chr02: 27074738 .. 27085283 (+)
RNA-Seq Expression	ClCG02G013230
Synteny	ClCG02G013230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAAATTCCTCCTCCTCCTCCTCTTCACTATCCTCCTCTTCATTTCTTCCTCTTCCGCCCACCTCTCCGTCGACACCTCTCTCAAGCTCATGACCGACGCCCTCGAATGGCCCACCACCACCTCCCTCATCGAAGCCGCCGCCGACGACATCCACGACGATGAACTCGACCTACAACAAGACCCCCGCAGATCTCTCTTCTGGAGCCGAGTCCACTACTACATTTCCTACGGCGCCCTTGCCGCCAACCGGATCCCTTGCCCGCCTCGCTCCGGCCGCCCTTACTACACTCACAACTGCTACAAGGCTCGCGGCCCTGTCAATCCTTACTCTCGCGGTTGCACCGCCATCACCCGCTGCCGCCGCTGATCTCTACACTTAAACGCCGTCGTATTCCCTTTCCCTAATTCCAAATTTGTAGATCATTCTTGATCTCATCTGTATTTGTCGATTTTAGGGCTTGGAGTTGGACAACAGAGACGACATGTCGTTTTGGTTCTTTTTCCCCTCTTCTATTTTTATTATACTTTTTGATTGTTGCGCAATCTAGGGTTCGGAAAACGGCGTCGTTTTGTTGGCTGAGGTATTATTATTTATTACTGTTATTTAATTATGATGATGTGTACCTTGATATCTGAACCGGATTATATAAATTCAAGTTCGTTTATTATTATTATTATTATTATTATTATTATTATTACGTAATTATATTTTAATCATATTTGATGCACGAATTACGCATAGTGTCGGTGGGCGGTGGGTTTTTTTTTTTCTTTCTTTTTTTAATTCGTGGTAAATAGTTGGTTAAATTAGTTGAAGAAAGTTAGAATTTAATTTATATATGGTTAGAATTTGGTAATTTATAAAGCTCTAATAAATAGTTGTTGTAAGCAAGATTATTTTATGAAATTATATTCAATGTAAATAGTCTGTTATTATGACTGTGCGGCAGTGTCGGCATTTTCAAATTTCAGATCAGTAATTTTTCAATAAATATGGTCTTAAGAGATGGAAATTAATGGATGAATGAGGTTTGAATTTTGTTAAGGAAAGGAGTGGATTTATTTTGTTCCCAACTTTTAACTTGGGCCTTTCAAGTTTCTAACATTCAAAATATGACTATTCAAATTAACCAATTGCGAGGGCTTGCATTCACCGGTCTTCTTTGATATCATGCCAAGGAAACAAATGGTTTTTAACTCATTTTTAATTTGTTCAAGAATTCAAATATTTACTCATGACCTTGTTTGATAACTGTTTTAGTTTTTTGTTTCTAAATTTTAAGAAACATTTTCTAAAAAATGACAAAAATTGAGAAACAATGAAATGTAGTTTCTCCTGTTTCTGTTTTTATTTTTCTCTTACTGTTCTCACAAATAATCATTTTCTTAACTTTTGGTGTAATTTCCTTCTACTAGTCATGAGTTTAAATCTCACCTGATGTAATTTGTTTTGGACATTTTTATTTTTATTTTTTGAAGAATCTATTTCTTCATTATTTTTCTTTATTTTTATTTTTTCTTTATTAATTTTGTTATTTACAAAATAATTCTTTCATATTTATATTTTATTTTAATTTTGAATTTTAAAATTTTCTAATATTTAGAATTATATATTATTTTAATTTTCAATATGAATTTTTTTATATTTCAAATTTCAACTTTTAAGATGAGCACCTTTTCTTTTCTTTTATATTTGTTTCCTCTTTTAGATTTTATTTATTTATTTATTTATTAATTTTGCTATTTATAAAAATAGTTATGGAATATTTATATTTTTATTTTTATTTTGAATTTTAAAATTCTTCAATATTTAGATTTATATATTATTTTAATTTTTTTTATATTTTAACTTTTGAGTATTAAATTTTGCAATATGTGTGTTTATATATTTTTTTAATTCTAATATTTTTATTATATCTGAAACCGAGTAGAAATTTTCAATATGTAAATTTTGCTGCATCGTAGACGTGAAGATGAAAGTTGAAAAATTGTTTAGATATTTAAAATTTAAGGATGAAGTATACACAAACTCTTCTAAATTGAAAGACTAAATTTGTAATATAATAATTTTTCTAATTGAACAACATCTTTCTTAGATATTAATGCAGTGGGAATTATATGAAAGGAAATCGCCCTTTGGCGTCTTTATATTTAAATAATAGCGTTGTTAGGTGTAAATAGAAAAAATAATTTTCAAAATAATTCTTCCAGGGGCACATGCATATTTATTGTAAGAATTATGACAAACGATTATATGCATATTTTATTATTGCGCGAGAAAGAGGAAAAAAAAAAAAAAAAAATTGAAGCACAGGCTAGAAATACTTGATAATTTTGAAAAATAGTCACACGGTAACTTTCACTAAATATGGCCAACTTGAAAAAATATACCCTTATTTTACCCCTAAACTTCAGTAGATGTTACAAAGCTTCTTTAGAATAGAAATCTTTTAGAATTTTAGACATAAATAAAGATTTAGAACGATGTGGTCATAAGTACATAAAATAGTTTGATGATCTAATATTTTGTTGTAGGTCATTGCCACATCATTCAAGTGTCAATTTTTGTAATATATATATATATATATATAAATTTTCTAAACCATGATAATTTTAGAATGTTTATAAAAGTTTATGGGTAATATTAAAACTTTTAAGAATATAGAAATATTGTTTAAACAAAGAACAAAGTTATTTAAATTCTCTTCCTCCCAAAACTTTGATTCATATAAATTTTATGGGATTTGTGTGGTTGATGTCTTCTTTTAAGTACAAGTATACATTGTCATCAAACAGAAGTATTGTGTGTTAGACGTATTTTAAATTAAAATACATATAATTAAAATATGGGCTATGTATGTGGATTAGTATTTTATCACATTGGTTATTTTATTAGATTGGGCCCTATTATGTGATCTATTTAATTAAAGTCCCTAGATTCACAATTGAGTATGGACTTAATAGAAGCCTATTCCTAGATTGATTAGGGTCTAATGGGAACCCTAATTAAACTAGTATATAAAGAGACCTTAGGCTATGGTTCTCAAGATACCAAAACAATAAACACTCAGTCTTTCTTGAATCCCATCTTGACATCCCAGTAAGACATTCAGAGTTTTGGTTGAGGAAAACAATAGTCATCTTGAAGCTATCATCAATTTCATCAATTTCTCAATGAAGCCCGGTATGTTATTTATTCTTGACAATTTAGCATGAATGATCATGAATGATCCTAAGGTCAATCTATTCAATATAGATTTTAAAGTAATTATGCTAACATTGTGAGTATTGAATCCATGAAAAGAATTTACAAAATTTTCAAATCAATTTGAATGCAAATTGAATTAGGCAAGCAACCAAAAGGTAACGGATTTAAATATGTTGGATTGGGAGTTTATGAAAACAATAAAGGAAAACAGTAGCAAAAGAATTCAAATGATAAGAAGGGTATTCAAAATCTAATTTTTGCCCACAAGGAATTGTGCCCACCTTTGCGCCCACAAACTTGTCCAACACTAGGCAAAGTTGCAATTATAGCATGCAACTCTCTATGCATCCACAAGGGGCAACTCTTCCAAGTGCAGTGTGAGGGGTCTCGTGCGCTCAAGATTGCACTCGCAACCTACTCTCACGATGTTTCGCAATACAAATCCAAGTTAACTCCTTTTTTTCCCTTTCGAGGATCGTAAGGAGGCTAAGCAAACCAACACATATGTCTATGGTTGTTTTGATACTTAGATAATGAAAAACCTACTTGAATTGATTTTATATGTTTTAACCCTATGTGTAGGGTAAAACCAAGTTCTATATGTCTAGATAGAAACTCCAAAGTTTTAGTGGTTCAATTATAGGAATCCAAGGTTAAGCGTGTTTAGTTTGGAACAATTCTATTTTGAATCATCTCCTAAAAATTTTTCTAAAAATCATGTGGGTGAGGACAAGATATACTAAAAAGATTGATGTTGGTTTGTGGAAATAGTCTTCACTCTTAGAAGTAGTTCAAGACAAGTAAGGATGACGTTGCCTAGTCGCAGAGAAAAAATGTAGGAAAATGGTGGAGATATATAGTATTGAATATGTATTTCAAATCATGGTCTAAACCTCAAGTCTAGGGCGTTACATAATTGGACTAAACTTGTTGAGACTCAGTACAATAGGATGATTAAAGTTTTTCACCTGAGCTATACTTTTTCATAAATTTTTTTCCTAAAGATGTAGGACATCAATTTTCATGTGTTGGCCCCCGGACAAAACTCTATATGGTTGAACAAAAATACAACCATATATCTCTAATGTAGAATGTGCTTTTAACTTTCAAATTGGCATACTGGTTGCATTTATGGAATGAATGTGTACTAACTAAATCAATCCAATTTCTTAAGACATGGTAGACTTTGCATAAGTTTCTTCAAAGCTCTATGGCAGATTAGTCTTTGCTTCAGAGCTTCTTCACAGTTCCATTCCACAAAAACCAATCTTTTTCTGCTACGATCCAAGCTACCAATAACTATCTACCAACGATAAGTTAATCATCCCAAAAGAAGTGGATTATATATGCCAATGCTGCCTATTTTGGTATTGGCAAAACCCTCTCCTAATAGTAAATACCTAACAACAATTATTGATAGAAACTTTGCATCGAGATACAATTTAAAAAGTAGGTAGATCACAAGAAGTACCACATATGAATAACAATTTTATTGACAAGAGTATAAACAAATTAAACAGAAGTATAAGAGAGAGATAACACACAGAAATGGTAACCCAATTCGGTGTAACCACACCTACGTCTGGGAGACCATACGCCTGAATGAAAAGAGTTATAACTAATGTTTACAACACTTCTTTTCACATACAAAATTTAACTAAGAAGTATAATGTGCAATAACTAGTGAGCGATTTAGGCTCCCCTAAATATTGTGCTCCTTATGGAAGAGTCAGCAGATTGGGCTCCCCCTTAATTTGATGCTACTCAACAATAACTCCAATCTAGAGTTGAATTATCATCCAACTACAAAAAATAATGCACCAAACCGAATATGATGTCAAGAATGATCAGTATATCGTCAACAATACAGGATCTATTTCTGACTAGCAAACTTGAGTCGATAACCACATTTCTCAAAACTCCTACAGCGCTCACATTCATTCACACAAAAACGGCTTAACCTCGAAAGGCACAACACCATGAAAATATATATATGTATATAACACAAATGGAAAAAACCCATCATCACCAAGGCAGGAGATTGAGACCAAATAAAGGTCAAGCCCAAAACATGTGCAACCAAAAAGGAAAGAATATGCAGCAGATACGACATGGATAAAGTCAAAGACAAGCCAAGAGACAATCGAAATAAAAGTAAATATTAACAGTCAACACCATTATAACACATTTTTCTATAACTTCTTTTTTTCTACAATGCTTTTAGCGTTGGAAAATTGTCTAAATCGTTGTAGTTCAAACACACCCCAAATAGCACAAACTCACCAAACTAACCCGCCTGAAAAATACCCCCAAGTCATCTAATCATACTTCAAATTCCATTAACTTATCCAATCTAACCCTTAAAAAACATGTCAAATATAATTCACTAAAACTAATTCTCTAATTGCAAGATAGTAATATCATCAAGCATACACTATGACACTTACCCAAGAACTTTAACTCACCCGTACCGATTACCAAACCCTATCGTGGTTATAACACTTTAAAAAGTCATGCAAACTAAAATGCAATACACTTACTTCATAATGATATTATTACATTAAAGAAATCATCTATACCTAGTTATAAGAGGGACCTTTTTGTGTGCTTGTCATTGTAGGACCAAAATAAGTTTACTTAAAAAAAAAAACCAACTATTAGTAATTATAGTTACAAAAGTAGGACGCAAATATTTTGGTTTTATTTTATTTTATTTTTGAGTTCAACTAAATTTAATATCTTAATCTATATATTTTAACTAGTTAAACTATGCTCAAATTTACCTTTGATGATCTAATAAGTATAAACATGATAAAATTAGTCAATAAACTTTAGTGAACTCATAAAAGATGAAATAAAATAACAAAATAAAATTAAAGTTAAAAAGGAAAAAAGAAAAAAAGAAAGAACGATCGTGAAATACCGAATGTCCCTTCAATTCACAATATTATAACAAGATTATTTAATAGATTGACTTAACAGATTGGACCAAAATGTTATTTGATTGATCCTTCAAACTAATGTTTTATTACCCTTTTCAAACTTGTTTAATATATTTTTTTTTAATTCCTATCTCTCACGTCTTGTTTTTCTAAATCACTTCTTTATATTTTATCTACGGTAATAACAATGCTCTCTTTCCTATATTTTGCCTTCAACAATAGCAACAATGACAACAAACAAAGTTATTTCTTCTTCTTTCAATAATGCACGAGATGGTCAGTAGCAATAAATAGTGTTTTTTTTAAATGTCAAATAAATCTAGTATAGAGAGTAAGAGTGAAAAAGTGAGCTAGGGTAAAAACTAGAAAGTGATTTAGGATAGAACGAAAAAATAAATAAATAAATAATCAACTACAAGTAGAATAAGAGCGTTAAAGAAAAAGGGAAGAAATACAAAAAATAAAAATAAAAATAAAAATGCTCGACGAAATTAGCAAAAAGGTTGTAAAGCTTTGTTTTGATAAAGGGTCAAATTTTATTTTTCTAATAAACAGTTAACGTGATTCGTACAAAAATCCCATTATAATATAATTACCAAAGTATGTTTCCATTGCAAGAAAATGCCTAAAACGGGTAGCAAAAGAAGAGTCATTTGTATCTCGTCGTCGTCGGACGACGACATTTCCTGTGGCGATGACGAAGAGGAATCAGAGGAGTATGATGATGAAGACGATGACGAAGGGGATTCGGAAGAGGAGTTCGATGATAAAAATGCTGACGACGGGGATTCCGAAGAGGAGTTTGATGACAAAGACGATGTCGAAACGGAATCGGAAGAGGAGTTTGATAATGAAGACAGCGACAATGACTCTAACGAAGTTCTATCCGAGCGAGTCATCCGCTTCCTTAAAGGTAATTTCGGATCGTTTCTTCTTTTTTTTTTTTTTTCTTTTATCACTCGCCATTATGTTGATATTTGAGCTTAAGGTCGAAGCGTCGATTGAAAGAATGAAAACGATGATTTTCTCTGAAGGTTAAGAAGTGGACAGGTTTTTTGAGAAATTCATATGGTATTTGATCTCTTAGAAGAAGAGCAATGAATTTATCAAATTTGTAACATATTCCGTTGCAGAGAACAAAAATTTGGATTCGTTAACACTTAATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAGCGGGGACTAAAGCCGTCTGTATTCAAAGAGTCAAGGATCATTGGAGGTACTTGAATTCTTGATCTTGAAACTCAAGATACAAATCTTAATATTGCGATCAATCAAGATACTTACAATTGTTAGTACTTGTTCATGTTGGGAAACTGCTATGTACTCATCTATGTAGTTTTTATATATTTGTTTAGAGTATAATTCTGTTTTTATTAGTCCCTTTATCTTTGAATTTCTTTCCTTTTATAATTAGTTACCTTATTATATTTACCCATTATTGGGTTATTAGAAAAATAAGGAAAAAATTTCTCTAAAATCAGTATGATATCATTATTTCCTCTGCGATTAATATTATTCCAGTTGTTGGACCTTCTATAAATTTCCAAACCTACAAATGAGGTGATTATTGAATTGTGGATATAACTATAATAATGTAACTCATAAGGTTAAGTGTCCACCTTGGGCATAAGCCTTAATGGCTGCTTTGCTTTTGGTTTAACCCAAAATAGTTAATACCAATGGAGATATTATCCTTCACTTATATCTCAGGATCTTTCTCTTGTTTAACCAATGTGAGACTTTGGTCACATTCCCAACAATCCTCTATCGAACAGAGAACCATTGAGCCTCTCCCAAATAGTTATCTATCCATCTGGCTCTTATCTAAATCAATTCCTCTTCACCAAAGCACACCACCTATTAGATGATCTCAGCCACGAATCCCACCATGACTACATCTTCTGAAGCTCACTACTTCTTTGTTCGATACCCTAGGATTCTACCAACATGATTAAGAAAAGGGGCACACTCTATTATTACGTTAAATCACCACTCAACCCAAAAGCTTAAGTTTATTAGTTACATTAAATTTAAATAAATAAAAAATTCAGCATTGACCTCTATGGAAGTCTTTTGATAGTAGAGAAGTGACTAGCGAGTATTTTAGTGAATGCTGATGGGTATCCATTATGTTCCTTTGGATTTGAATAGATGGAAAGTAGAAGAGAAGATTTTAGACAAATGGTATGTTGAGAAATTTTCACATCCATTTAAGGATTCTTTTTTTTCCTTTTCCTGGTTTATCACTGGTTTCTGGAGTTTTTATCTTCCAAGAGTTCTGTATTGAAGCATATCAAACCAGAAGGCAGCAGCATCATTTTCTTAATAATATATATTTTTTTCACATTTTTTATGACCCGATATTGTGTTCCATTTGTTGCTGACAAAATTCTTGATAATCTGATATGTATCCTATGAATTCTCTTCTGGTACAACTACTACTAACAAAACGTATTTGCTTTTTTTTCCCCCTTCCATCTCAGGATGAAAGATGGAAATGGTGAAGCTCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTAATCGCTTGTTCATTTGTCATAGCATTTTCTTTGATCTTTGATCTTTGATCTCTTTTAATGGCTGTAATTAATCAATTAAAACATCAATGTAGGTGATGTTTGTAGGGGAGATACTGTTCTGTTCACTCAGAAAGTTTATGAAAAGTACCCAAACAACTTACTCTTCCACCACTATTCTTGTGCTTGATATTTTGGATTATACTTCTACTTCTTGTAGTTTACTTTTTATTAGGTTTGATAAAGTAACTAGGCATGGAGGTCTTATAGGGAAGAGAACTGTAGCAGGGAGGGTAGTAAAGGAGAGCTATGGTGCAAGCAAACAGCAGCATACTTTTACTGTAAGGCTTCTTTCTGCTCAAGGAATCATTTTTTCCCATATAGTAATTCATATCGGTTGTGGATTTTTTGCATCATATGTCGTAATATGGTCAATTTGTTTGCATCTAATATTCACTGCAATGCTTATGTAGCAGTCAGTAAGTTTTTTCCTTTCTTTGTTCTTTCTCTTATATATTTATTATGTAATCATTTGCGACTCATATTTCCAACACTTGTGACTATAATGTACTAGGTCGAGGTTTTATGGAGCAGGGGAGTTAGGAAATTACCCCCACTTTATCCTCTGCTGGTTAAGGGACGAAATCTCTACAAACTAAGAACTTTCAGACGGGTAAGTACTCATTTACATAAGAATATTTTATTTTCATACAAAAGCATCCGCGTTAATAGTGGTTGTCCTGTGGATGAAAATTTTAAATCAAATTGATTTTTTTAGTTGAGTCATTGTTAGTGAAGTACGCATATAAATATGAATATAGTAACAGAACAATGTTCATTGTGTCTCACATTCTTAATCCTTAAACGAGTTAACTTCAAGACCTGCCTCCTTTCGAAATTTATATCATAAAACTAAAGTTCTACCAAATATGATTGTAAGAGTTTGTATCGTCAGGCCTTCTCTCCAGTGGACGATAAATGAAACCTAATGACCTATATTGTTGTATTTTATTCATTATTTGTCTGTTCTGTTACTTCCTCTTTAGCGTTGGAATGATGAAGCTCAAAGAGTTCAAGTTCTTGCTGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTTTACGAGCAATGCAGAAAAAGAAAAGAAAACTTCAAACCGGAGGTACTAGTTCTCACCCCGACTAGCCATAAAAACAGAAAAGGAGCTTACTGCAATTGGATAAATGTTACCATATTTTTCCATTGCAATTAACAGGATTTGCAAAGAATCAAGGACATGTTCATCTTGCAAGACAAGCTCTGAATAGTAAAGAGAGTCGCAAAAGGATGCCATCAAGGGACAATAACAATGCTGTACGTAGACATCCAACATAGGTCCCTAGTATTTTTTGAATTTAAAGTTTATTCTAACTTCCTAGTTACACAATGACAAGGTAGGACGGTTCTGGTTACCTCCAAGTTTCGCACGTGACCTGGGCTAAATGGTAAAAGAGAGAATAGAGGAGCGAATGGGATGACAATGTGGGGGGAAACAAGAGGATGGTTGACATTCATCAATGATCAGTTCTTTTAAAATATTATGTTACAGATGAGGAAGATAGAATTCAAATCTACTATCCATAAGAGATTAGTATTTGAGTTTAAACTGTGTTCAAAATCAGCATGATTACAGTAGTAGAAAACTTTTAAAAGCCAATCAGGCATTTAGGCTTGTTCGTATATGTCATTAGCCTATTATAACTGAATCTGCCTTTGCTTTCATTTTATTGTGGTAAAATACGGTTTTAAACGAACTTAGTTTGATGTAGA

mRNA sequence

ATGGCTTCCAAATTCCTCCTCCTCCTCCTCTTCACTATCCTCCTCTTCATTTCTTCCTCTTCCGCCCACCTCTCCGTCGACACCTCTCTCAAGCTCATGACCGACGCCCTCGAATGGCCCACCACCACCTCCCTCATCGAAGCCGCCGCCGACGACATCCACGACGATGAACTCGACCTACAACAAGACCCCCGCAGATCTCTCTTCTGGAGCCGAGTCCACTACTACATTTCCTACGGCGCCCTTGCCGCCAACCGGATCCCTTGCCCGCCTCGCTCCGGCCGCCCTTACTACACTCACAACTGCTACAAGGCTCGCGGCCCTGGCTTGGAGTTGGACAACAGAGACGACATGTCGTTTTGCAAAAGAAGAGTCATTTGTATCTCGTCGTCGTCGGACGACGACATTTCCTGTGGCGATGACGAAGAGGAATCAGAGGAGTATGATGATGAAGACGATGACGAAGGGGATTCGGAAGAGGAGTTCGATGATAAAAATGCTGACGACGGGGATTCCGAAGAGGAGTTTGATGACAAAGACGATGTCGAAACGGAATCGGAAGAGGAGTTTGATAATGAAGACAGCGACAATGACTCTAACGAAGTTCTATCCGAGCGAGTCATCCGCTTCCTTAAAGAGAACAAAAATTTGGATTCGTTAACACTTAATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAGCGGGGACTAAAGCCGTCTGTATTCAAAGAGTCAAGGATCATTGGAGGATGAAAGATGGAAATGGTGAAGCTCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTGATGTTTGTAGGGGAGATACTGTTCTGTTCACTCAGAAAGTTTATGAAAAGTTTGATAAAGTAACTAGGCATGGAGGTCTTATAGGGAAGAGAACTGTAGCAGGGAGGGTAGTAAAGGAGAGCTATGGTGCAAGCAAACAGCAGCATACTTTTACTGTCGAGGTTTTATGGAGCAGGGGAGTTAGGAAATTACCCCCACTTTATCCTCTGCTGGTTAAGGGACGAAATCTCTACAAACTAAGAACTTTCAGACGGCGTTGGAATGATGAAGCTCAAAGAGTTCAAGTTCTTGCTGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTTTACGAGCAATGCAGAAAAAGAAAAGAAAACTTCAAACCGGAGGATTTGCAAAGAATCAAGGACATGTTCATCTTGCAAGACAAGCTCTGAATAGTAAAGAGAGTCGCAAAAGGATGCCATCAAGGGACAATAACAATGCTGTACGTAGACATCCAACATAGGTCCCTAGTATTTTTTGAATTTAAAGTTTATTCTAACTTCCTAGTTACACAATGACAAGGTAGGACGGTTCTGGTTACCTCCAAGTTTCGCACGTGACCTGGGCTAAATGGTAAAAGAGAGAATAGAGGAGCGAATGGGATGACAATGTGGGGGGAAACAAGAGGATGGTTGACATTCATCAATGATCAGTTCTTTTAAAATATTATGTTACAGATGAGGAAGATAGAATTCAAATCTACTATCCATAAGAGATTAGTATTTGAGTTTAAACTGTGTTCAAAATCAGCATGATTACAGTAGTAGAAAACTTTTAAAAGCCAATCAGGCATTTAGGCTTGTTCGTATATGTCATTAGCCTATTATAACTGAATCTGCCTTTGCTTTCATTTTATTGTGGTAAAATACGGTTTTAAACGAACTTAGTTTGATGTAGA

Coding sequence (CDS)

ATGGCTTCCAAATTCCTCCTCCTCCTCCTCTTCACTATCCTCCTCTTCATTTCTTCCTCTTCCGCCCACCTCTCCGTCGACACCTCTCTCAAGCTCATGACCGACGCCCTCGAATGGCCCACCACCACCTCCCTCATCGAAGCCGCCGCCGACGACATCCACGACGATGAACTCGACCTACAACAAGACCCCCGCAGATCTCTCTTCTGGAGCCGAGTCCACTACTACATTTCCTACGGCGCCCTTGCCGCCAACCGGATCCCTTGCCCGCCTCGCTCCGGCCGCCCTTACTACACTCACAACTGCTACAAGGCTCGCGGCCCTGGCTTGGAGTTGGACAACAGAGACGACATGTCGTTTTGCAAAAGAAGAGTCATTTGTATCTCGTCGTCGTCGGACGACGACATTTCCTGTGGCGATGACGAAGAGGAATCAGAGGAGTATGATGATGAAGACGATGACGAAGGGGATTCGGAAGAGGAGTTCGATGATAAAAATGCTGACGACGGGGATTCCGAAGAGGAGTTTGATGACAAAGACGATGTCGAAACGGAATCGGAAGAGGAGTTTGATAATGAAGACAGCGACAATGACTCTAACGAAGTTCTATCCGAGCGAGTCATCCGCTTCCTTAAAGAGAACAAAAATTTGGATTCGTTAACACTTAATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAGCGGGGACTAAAGCCGTCTGTATTCAAAGAGTCAAGGATCATTGGAGGATGAAAGATGGAAATGGTGAAGCTCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTGATGTTTGTAGGGGAGATACTGTTCTGTTCACTCAGAAAGTTTATGAAAAGTTTGATAAAGTAACTAGGCATGGAGGTCTTATAGGGAAGAGAACTGTAGCAGGGAGGGTAGTAAAGGAGAGCTATGGTGCAAGCAAACAGCAGCATACTTTTACTGTCGAGGTTTTATGGAGCAGGGGAGTTAGGAAATTACCCCCACTTTATCCTCTGCTGGTTAAGGGACGAAATCTCTACAAACTAAGAACTTTCAGACGGCGTTGGAATGATGAAGCTCAAAGAGTTCAAGTTCTTGCTGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTTTACGAGCAATGCAGAAAAAGAAAAGAAAACTTCAAACCGGAGGATTTGCAAAGAATCAAGGACATGTTCATCTTGCAAGACAAGCTCTGAATAGTAAAGAGAGTCGCAAAAGGATGCCATCAAGGGACAATAACAATGCTGTACGTAGACATCCAACATAG

Protein sequence

MASKFLLLLLFTILLFISSSSAHLSVDTSLKLMTDALEWPTTTSLIEAAADDIHDDELDLQQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPGLELDNRDDMSFCKRRVICISSSSDDDISCGDDEEESEEYDDEDDDEGDSEEEFDDKNADDGDSEEEFDDKDDVETESEEEFDNEDSDNDSNEVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYEKFDKVTRHGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRWNDEAQRVQVLAEKHKRGAAARGLRAMQKKKRKLQTGGFAKNQGHVHLARQALNSKESRKRMPSRDNNNAVRRHPT

Homology

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BLAST of ClCG02G013230 vs. NCBI nr
Match: XP_038902878.1 (zinc finger CCCH domain-containing protein 62-like [Benincasa hispida])

HSP 1 Score: 524.2 bits (1349), Expect = 1.0e-144
Identity = 285/309 (92.23%), Postives = 295/309 (95.47%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISCGDDEEESEEYDDEDDDEGDSEEEFDDKNADDGDSEEEFDDKDD 181
           KRRVICISSSSDDDISCGDDEE+SEEYDD+DD + +SEEEFDD++ DDGDSEEEFD KDD
Sbjct: 6   KRRVICISSSSDDDISCGDDEEKSEEYDDQDDADWESEEEFDDEDDDDGDSEEEFDYKDD 65

Query: 182 VETESEEEFDNEDSDNDSNEVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKA 241
           VE ESEEEFDNEDSDND +EVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKA
Sbjct: 66  VEGESEEEFDNEDSDNDCDEVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKA 125

Query: 242 VCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYEKFDKVTRHGGLI 301
           VCIQRV++HWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVY KFDKVTRHGGLI
Sbjct: 126 VCIQRVEEHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLI 185

Query: 302 GKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRWN 361
           GKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRR WN
Sbjct: 186 GKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWN 245

Query: 362 DEAQRVQVLAEKHKRGAAARGLRAMQKKKRKL-QTGGFAKNQGHVHLARQALNSKESRKR 421
           DEA+RVQVLAEKHKRGAAARGLRAMQKKKRK  QT G AKNQGHVHLARQ LNSKESRKR
Sbjct: 246 DEAERVQVLAEKHKRGAAARGLRAMQKKKRKFPQTRGCAKNQGHVHLARQGLNSKESRKR 305

Query: 422 MPSRDNNNA 430
           MPSRD NNA
Sbjct: 306 MPSRDYNNA 314

[Close]

BLAST of ClCG02G013230 vs. NCBI nr
Match: KGN62051.1 (hypothetical protein Csa_006128 [Cucumis sativus])

HSP 1 Score: 460.7 bits (1184), Expect = 1.4e-125
Identity = 256/315 (81.27%), Postives = 271/315 (86.03%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISCGDDEEESEEYDDEDDDEGDSEEEFDDKNADDGDSEEEFDDKDD 181
           KR VICISSSS  D     DEEESEEYDDEDD  GDSEEEFDDK+ D+G           
Sbjct: 7   KRTVICISSSSSSDA----DEEESEEYDDEDDGVGDSEEEFDDKDDDEG----------- 66

Query: 182 VETESEEEFDNEDSDNDSNEVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKA 241
              ES EEFDNE+SDN  +EVLS+RVIRFLKENKNLDSLTLNDCKAYLRE+RLRIAGTKA
Sbjct: 67  ---ESGEEFDNEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESRLRIAGTKA 126

Query: 242 VCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYEKFDKVTRHGGLI 301
           VCIQRVK+HWR+K+GNGE  YP+SSFVVNCTGDVCRGDTVLFTQKVY KFDKVTRHGGLI
Sbjct: 127 VCIQRVKEHWRLKNGNGEVQYPKSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLI 186

Query: 302 GKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRWN 361
           GKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKL PLYPLLVKGRNLYKLRTFR  WN
Sbjct: 187 GKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLRPLYPLLVKGRNLYKLRTFRLLWN 246

Query: 362 DEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRKR 421
           DEA+RVQ LAEKH+RG AARGLRAMQKKKRK +QT G A+NQGHVHLARQ L SKE R+R
Sbjct: 247 DEAERVQALAEKHRRGVAARGLRAMQKKKRKTIQTKGCAENQGHVHLARQPLKSKEKRQR 303

Query: 422 MPSRDNNNAVRRHPT 436
           MPSRDNNN VRRH T
Sbjct: 307 MPSRDNNNVVRRHST 303

[Close]

BLAST of ClCG02G013230 vs. NCBI nr
Match: XP_016902184.1 (PREDICTED: zinc finger CCCH domain-containing protein 62-like isoform X1 [Cucumis melo])

HSP 1 Score: 456.8 bits (1174), Expect = 2.0e-124
Identity = 261/311 (83.92%), Postives = 274/311 (88.10%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISCGDDEEESEEYDDEDDDEGDSEEEFDDKNADDGDSEEEFDDKDD 181
           KR VICISSSSD      DDEEES EYDDEDD  GDSEEEF D+  DDGD   E   +DD
Sbjct: 36  KRTVICISSSSD------DDEEESVEYDDEDDGVGDSEEEFHDE--DDGDVNSE---EDD 95

Query: 182 VETESEEEFDNEDSDNDSNE-VLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 241
            E ES EEFD+E+SDN  +E VLS+RVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK
Sbjct: 96  DEGESGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 155

Query: 242 AVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYEKFDKVTRHGGL 301
           AVCIQRVK+HWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVY KFDKVTRHGGL
Sbjct: 156 AVCIQRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 215

Query: 302 IGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRW 361
           IGKRTVAGRVVKESYGASKQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRR W
Sbjct: 216 IGKRTVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLW 275

Query: 362 NDEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRK 421
           NDEA+RVQVLAEKH+RGAAAR LRAMQKKKRK +QT G AKNQGHVHLARQ L SKE R+
Sbjct: 276 NDEAERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQ 335

Query: 422 RMPSRDNNNAV 431
           RMPSRDNNNA+
Sbjct: 336 RMPSRDNNNAI 335

[Close]

BLAST of ClCG02G013230 vs. NCBI nr
Match: XP_016902186.1 (PREDICTED: zinc finger CCCH domain-containing protein 62-like isoform X3 [Cucumis melo])

HSP 1 Score: 456.1 bits (1172), Expect = 3.5e-124
Identity = 262/312 (83.97%), Postives = 274/312 (87.82%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISCGDDEEESEEYDDEDDDEGDSEEEFDDKNADDGDSEEEFDDKDD 181
           KR VICISSSSD      DDEEES EYDDEDD  GDSEEEF D+  DDGD   E   +DD
Sbjct: 36  KRTVICISSSSD------DDEEESVEYDDEDDGVGDSEEEFHDE--DDGDVNSE---EDD 95

Query: 182 VETESEEEFDNEDSDNDSNE-VLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 241
            E ES EEFD+E+SDN  +E VLS+RVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK
Sbjct: 96  DEGESGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 155

Query: 242 AVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYEKFDKVTRHGGL 301
           AVCIQRVK+HWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVY KFDKVTRHGGL
Sbjct: 156 AVCIQRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 215

Query: 302 IGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRW 361
           IGKRTVAGRVVKESYGASKQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRR W
Sbjct: 216 IGKRTVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLW 275

Query: 362 NDEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRK 421
           NDEA+RVQVLAEKH+RGAAAR LRAMQKKKRK +QT G AKNQGHVHLARQ L SKE R+
Sbjct: 276 NDEAERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQ 335

Query: 422 RMPSRDNNNAVR 432
           RMPSRDNNNA R
Sbjct: 336 RMPSRDNNNARR 336

[Close]

BLAST of ClCG02G013230 vs. NCBI nr
Match: KAA0045864.1 (zinc finger CCCH domain-containing protein 62-like isoform X1 [Cucumis melo var. makuwa] >TYK13724.1 zinc finger CCCH domain-containing protein 62-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 456.1 bits (1172), Expect = 3.5e-124
Identity = 262/312 (83.97%), Postives = 274/312 (87.82%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISCGDDEEESEEYDDEDDDEGDSEEEFDDKNADDGDSEEEFDDKDD 181
           KR VICISSSSD      DDEEES EYDDEDD  GDSEEEF D+  DDGD   E   +DD
Sbjct: 7   KRTVICISSSSD------DDEEESVEYDDEDDGVGDSEEEFHDE--DDGDVNSE---EDD 66

Query: 182 VETESEEEFDNEDSDNDSNE-VLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 241
            E ES EEFD+E+SDN  +E VLS+RVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK
Sbjct: 67  DEGESGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 126

Query: 242 AVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYEKFDKVTRHGGL 301
           AVCIQRVK+HWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVY KFDKVTRHGGL
Sbjct: 127 AVCIQRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 186

Query: 302 IGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRW 361
           IGKRTVAGRVVKESYGASKQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRR W
Sbjct: 187 IGKRTVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLW 246

Query: 362 NDEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRK 421
           NDEA+RVQVLAEKH+RGAAAR LRAMQKKKRK +QT G AKNQGHVHLARQ L SKE R+
Sbjct: 247 NDEAERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQ 306

Query: 422 RMPSRDNNNAVR 432
           RMPSRDNNNA R
Sbjct: 307 RMPSRDNNNAGR 307

[Close]

BLAST of ClCG02G013230 vs. ExPASy Swiss-Prot
Match: Q338N2 (Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0391300 PE=4 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 1.1e-35
Identity = 120/319 (37.62%), Postives = 172/319 (53.92%), Query Frame = 0


Query: 139 GDDEEESEEYDDEDDDEGDSEEEFDDKNADDGDSEEEFDDKD-DVETESEEEFD-NEDSD 198
           G++EE SEE  + DD+E +  E +D    DD ++       D D  +  +  FD   D D
Sbjct: 22  GEEEEGSEEEVESDDEEEEEGEGYDWSEEDDPEAASLAGICDPDAGSYDDPTFDPAADGD 81

Query: 199 NDSNEVLSERVIRF------------------------------LKENKNLDSLTLNDCK 258
            + + VL  R+ R                               L  +  L+ L + +CK
Sbjct: 82  LEVDAVLRSRMARMSLSSARKDRKGSRMPKMGKEEMDLLAMVDKLMHDGQLEKLKVYECK 141

Query: 259 AYLRENRLRIAGTKAVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQK 318
           AYLR ++LR++G K V + R++    +K   GE  YP SSFV+NC GD C+GD V+F Q 
Sbjct: 142 AYLRMHKLRLSGNKEVLLTRIRGQIEVKT-MGEVKYPVSSFVLNCQGDSCKGDVVVFEQN 201

Query: 319 VYEKFDKVTR--HGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLL 378
           +Y++     R   G L G+RT AGR++KESYG  KQQHTFT+E+LWSRG +  PPL+PLL
Sbjct: 202 IYKRKKGAPRGVKGHLCGQRTNAGRIIKESYGTKKQQHTFTIEILWSRGYKPWPPLHPLL 261

Query: 379 VKGRNLYKLRTFRRRWNDEAQRVQVLAEKHKRGAAARGLRAMQ-KKKRKLQTGGFAKNQG 423
           +KGRNLYK +T R+ W DE +R + L EKH RG  AR  R ++ K K   +     +N+ 
Sbjct: 262 IKGRNLYKDKTMRQPWLDEEERNRALQEKHARGYVARKTREVRIKDKENERMRRLNRNKE 321

[Close]

BLAST of ClCG02G013230 vs. ExPASy Swiss-Prot
Match: Q9FHA6 (Protein RALF-like 34 OS=Arabidopsis thaliana OX=3702 GN=RALFL34 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.3e-20
Identity = 57/111 (51.35%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 2   ASKFLLLLLFTILLFIS-SSSAHLSVDTSLKLMTDALEWPTTTSLIEAAADDIHDDELDL 61
           AS   LLL+ ++L FIS   S  LS + SL L+ D  +WP + S      D     E+  
Sbjct: 3   ASSLNLLLILSLLTFISLQRSESLSDNPSLTLLPDGFDWPISHSDEFDIIDGEESFEVTE 62

Query: 62  QQD---PRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGP 109
           + D    RRSL+W R  YYISYGAL+ANR+PCPPRSGR YYTHNC++ARGP
Sbjct: 63  EDDGVTDRRSLYWRRTKYYISYGALSANRVPCPPRSGRSYYTHNCFRARGP 113

[Close]

BLAST of ClCG02G013230 vs. ExPASy TrEMBL
Match: A0A0A0LQ19 (SAP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G292810 PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 6.8e-126
Identity = 256/315 (81.27%), Postives = 271/315 (86.03%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISCGDDEEESEEYDDEDDDEGDSEEEFDDKNADDGDSEEEFDDKDD 181
           KR VICISSSS  D     DEEESEEYDDEDD  GDSEEEFDDK+ D+G           
Sbjct: 7   KRTVICISSSSSSDA----DEEESEEYDDEDDGVGDSEEEFDDKDDDEG----------- 66

Query: 182 VETESEEEFDNEDSDNDSNEVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKA 241
              ES EEFDNE+SDN  +EVLS+RVIRFLKENKNLDSLTLNDCKAYLRE+RLRIAGTKA
Sbjct: 67  ---ESGEEFDNEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESRLRIAGTKA 126

Query: 242 VCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYEKFDKVTRHGGLI 301
           VCIQRVK+HWR+K+GNGE  YP+SSFVVNCTGDVCRGDTVLFTQKVY KFDKVTRHGGLI
Sbjct: 127 VCIQRVKEHWRLKNGNGEVQYPKSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLI 186

Query: 302 GKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRWN 361
           GKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKL PLYPLLVKGRNLYKLRTFR  WN
Sbjct: 187 GKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLRPLYPLLVKGRNLYKLRTFRLLWN 246

Query: 362 DEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRKR 421
           DEA+RVQ LAEKH+RG AARGLRAMQKKKRK +QT G A+NQGHVHLARQ L SKE R+R
Sbjct: 247 DEAERVQALAEKHRRGVAARGLRAMQKKKRKTIQTKGCAENQGHVHLARQPLKSKEKRQR 303

Query: 422 MPSRDNNNAVRRHPT 436
           MPSRDNNN VRRH T
Sbjct: 307 MPSRDNNNVVRRHST 303

[Close]

BLAST of ClCG02G013230 vs. ExPASy TrEMBL
Match: A0A1S4E1S9 (zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497448 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 9.9e-125
Identity = 261/311 (83.92%), Postives = 274/311 (88.10%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISCGDDEEESEEYDDEDDDEGDSEEEFDDKNADDGDSEEEFDDKDD 181
           KR VICISSSSD      DDEEES EYDDEDD  GDSEEEF D+  DDGD   E   +DD
Sbjct: 36  KRTVICISSSSD------DDEEESVEYDDEDDGVGDSEEEFHDE--DDGDVNSE---EDD 95

Query: 182 VETESEEEFDNEDSDNDSNE-VLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 241
            E ES EEFD+E+SDN  +E VLS+RVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK
Sbjct: 96  DEGESGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 155

Query: 242 AVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYEKFDKVTRHGGL 301
           AVCIQRVK+HWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVY KFDKVTRHGGL
Sbjct: 156 AVCIQRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 215

Query: 302 IGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRW 361
           IGKRTVAGRVVKESYGASKQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRR W
Sbjct: 216 IGKRTVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLW 275

Query: 362 NDEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRK 421
           NDEA+RVQVLAEKH+RGAAAR LRAMQKKKRK +QT G AKNQGHVHLARQ L SKE R+
Sbjct: 276 NDEAERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQ 335

Query: 422 RMPSRDNNNAV 431
           RMPSRDNNNA+
Sbjct: 336 RMPSRDNNNAI 335

[Close]

BLAST of ClCG02G013230 vs. ExPASy TrEMBL
Match: A0A5A7TS31 (Zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002520 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 1.7e-124
Identity = 262/312 (83.97%), Postives = 274/312 (87.82%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISCGDDEEESEEYDDEDDDEGDSEEEFDDKNADDGDSEEEFDDKDD 181
           KR VICISSSSD      DDEEES EYDDEDD  GDSEEEF D+  DDGD   E   +DD
Sbjct: 7   KRTVICISSSSD------DDEEESVEYDDEDDGVGDSEEEFHDE--DDGDVNSE---EDD 66

Query: 182 VETESEEEFDNEDSDNDSNE-VLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 241
            E ES EEFD+E+SDN  +E VLS+RVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK
Sbjct: 67  DEGESGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 126

Query: 242 AVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYEKFDKVTRHGGL 301
           AVCIQRVK+HWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVY KFDKVTRHGGL
Sbjct: 127 AVCIQRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 186

Query: 302 IGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRW 361
           IGKRTVAGRVVKESYGASKQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRR W
Sbjct: 187 IGKRTVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLW 246

Query: 362 NDEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRK 421
           NDEA+RVQVLAEKH+RGAAAR LRAMQKKKRK +QT G AKNQGHVHLARQ L SKE R+
Sbjct: 247 NDEAERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQ 306

Query: 422 RMPSRDNNNAVR 432
           RMPSRDNNNA R
Sbjct: 307 RMPSRDNNNAGR 307

[Close]

BLAST of ClCG02G013230 vs. ExPASy TrEMBL
Match: A0A1S4E1T3 (zinc finger CCCH domain-containing protein 62-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497448 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 1.7e-124
Identity = 262/312 (83.97%), Postives = 274/312 (87.82%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISCGDDEEESEEYDDEDDDEGDSEEEFDDKNADDGDSEEEFDDKDD 181
           KR VICISSSSD      DDEEES EYDDEDD  GDSEEEF D+  DDGD   E   +DD
Sbjct: 36  KRTVICISSSSD------DDEEESVEYDDEDDGVGDSEEEFHDE--DDGDVNSE---EDD 95

Query: 182 VETESEEEFDNEDSDNDSNE-VLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 241
            E ES EEFD+E+SDN  +E VLS+RVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK
Sbjct: 96  DEGESGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 155

Query: 242 AVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYEKFDKVTRHGGL 301
           AVCIQRVK+HWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVY KFDKVTRHGGL
Sbjct: 156 AVCIQRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 215

Query: 302 IGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRW 361
           IGKRTVAGRVVKESYGASKQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRR W
Sbjct: 216 IGKRTVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLW 275

Query: 362 NDEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRK 421
           NDEA+RVQVLAEKH+RGAAAR LRAMQKKKRK +QT G AKNQGHVHLARQ L SKE R+
Sbjct: 276 NDEAERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQ 335

Query: 422 RMPSRDNNNAVR 432
           RMPSRDNNNA R
Sbjct: 336 RMPSRDNNNARR 336

[Close]

BLAST of ClCG02G013230 vs. ExPASy TrEMBL
Match: A0A1S4E2I3 (zinc finger CCCH domain-containing protein 62-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497448 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.9e-124
Identity = 264/316 (83.54%), Postives = 276/316 (87.34%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISCGDDEEESEEYDDEDDDEGDSEEEFDDKNADDGDSEEEFDDKDD 181
           KR VICISSSSD      DDEEES EYDDEDD  GDSEEEF D+  DDGD   E   +DD
Sbjct: 36  KRTVICISSSSD------DDEEESVEYDDEDDGVGDSEEEFHDE--DDGDVNSE---EDD 95

Query: 182 VETESEEEFDNEDSDNDSNE-VLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 241
            E ES EEFD+E+SDN  +E VLS+RVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK
Sbjct: 96  DEGESGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 155

Query: 242 AVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYEKFDKVTRHGGL 301
           AVCIQRVK+HWR+KDGNGE  YPRSSFVVNC  DVCRGDTVLFTQKVY KFDKVTRHGGL
Sbjct: 156 AVCIQRVKEHWRLKDGNGEVQYPRSSFVVNC--DVCRGDTVLFTQKVYAKFDKVTRHGGL 215

Query: 302 IGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRW 361
           IGKRTVAGRVVKESYGASKQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRR W
Sbjct: 216 IGKRTVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLW 275

Query: 362 NDEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRK 421
           NDEA+RVQVLAEKH+RGAAAR LRAMQKKKRK +QT G AKNQGHVHLARQ L SKE R+
Sbjct: 276 NDEAERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQ 335

Query: 422 RMPSRDNNNAVRRHPT 436
           RMPSRDNNNAVRRH T
Sbjct: 336 RMPSRDNNNAVRRHST 338

[Close]

BLAST of ClCG02G013230 vs. TAIR 10
Match: AT5G66840.1 (SAP domain-containing protein )

HSP 1 Score: 243.4 bits (620), Expect = 3.3e-64
Identity = 146/302 (48.34%), Postives = 201/302 (66.56%), Query Frame = 0


Query: 138 CGDDEEESEEYDDEDDDEGDSEEEFDDKNADDGDSEEEFDDKDDVETESEEEFDNEDSDN 197
           C  +EEE + + DE++ +   EEE +D N+ + DS+   DD D  E++ E +      DN
Sbjct: 12  CSSEEEEEDVFGDENNYDETEEEEDEDTNSSEDDSDWSHDDDDATESDVEADEIGVKGDN 71

Query: 198 DSNEVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCIQRVKDHWRMKDGN 257
           D  +   ++V R L    +L S+ + +CKAYLR++ LR++GTK VCI R+ +HWR+KDG 
Sbjct: 72  DDGDE-DDKVTRLLTAGSDLKSVNVKECKAYLRKHGLRLSGTKPVCIDRILEHWRIKDGT 131

Query: 258 GEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYEKFDKVTRHGGLIGKRTVAGRVVKESYGA 317
           GEA YP+SSF +NC GDVC+GD VLFTQKV+ K++K+ + G ++G+RTVAG+VVKESYG 
Sbjct: 132 GEAVYPKSSFAINCKGDVCKGDIVLFTQKVHHKYEKMKKSGNIMGRRTVAGQVVKESYGT 191

Query: 318 SKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRWNDEAQRVQVLAEKHKRG 377
           +KQQHTFT+EVLW  G +KLPPLYPLLVKGRNLY+L T R+RW +E  RV+VL EKH RG
Sbjct: 192 AKQQHTFTIEVLWCEGTQKLPPLYPLLVKGRNLYRLMTLRQRWPNEEDRVKVLNEKHNRG 251

Query: 378 AAARGLRAMQKKKRKLQTG-----GFAKNQGHVHLARQALNSK-ESRKRMPSRDNNNAVR 434
           AAAR +     ++RK+++G     G  +  GHV    Q    K E  + +  R   N   
Sbjct: 252 AAARKV----MRERKIKSGYVLKDGRLQKPGHVKKPCQVKTRKNEKDENLTQRLRQNTPA 308

[Close]

BLAST of ClCG02G013230 vs. TAIR 10
Match: AT5G67070.1 (ralf-like 34 )

HSP 1 Score: 102.4 bits (254), Expect = 9.1e-22
Identity = 57/111 (51.35%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 2   ASKFLLLLLFTILLFIS-SSSAHLSVDTSLKLMTDALEWPTTTSLIEAAADDIHDDELDL 61
           AS   LLL+ ++L FIS   S  LS + SL L+ D  +WP + S      D     E+  
Sbjct: 3   ASSLNLLLILSLLTFISLQRSESLSDNPSLTLLPDGFDWPISHSDEFDIIDGEESFEVTE 62

Query: 62  QQD---PRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGP 109
           + D    RRSL+W R  YYISYGAL+ANR+PCPPRSGR YYTHNC++ARGP
Sbjct: 63  EDDGVTDRRSLYWRRTKYYISYGALSANRVPCPPRSGRSYYTHNCFRARGP 113

The following BLAST results are available for this feature:

BLAST of ClCG02G013230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902878.1	1.0e-144	92.23	zinc finger CCCH domain-containing protein 62-like [Benincasa hispida]	[more]
KGN62051.1	1.4e-125	81.27	hypothetical protein Csa_006128 [Cucumis sativus]	[more]
XP_016902184.1	2.0e-124	83.92	PREDICTED: zinc finger CCCH domain-containing protein 62-like isoform X1 [Cucumi...	[more]
XP_016902186.1	3.5e-124	83.97	PREDICTED: zinc finger CCCH domain-containing protein 62-like isoform X3 [Cucumi...	[more]
KAA0045864.1	3.5e-124	83.97	zinc finger CCCH domain-containing protein 62-like isoform X1 [Cucumis melo var....	[more]

BLAST of ClCG02G013230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q338N2	1.1e-35	37.62	Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX...	[more]
Q9FHA6	1.3e-20	51.35	Protein RALF-like 34 OS=Arabidopsis thaliana OX=3702 GN=RALFL34 PE=2 SV=1	[more]

BLAST of ClCG02G013230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ19	6.8e-126	81.27	SAP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G292810 PE=4 SV...	[more]
A0A1S4E1S9	9.9e-125	83.92	zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo OX...	[more]
A0A5A7TS31	1.7e-124	83.97	Zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo va...	[more]
A0A1S4E1T3	1.7e-124	83.97	zinc finger CCCH domain-containing protein 62-like isoform X3 OS=Cucumis melo OX...	[more]
A0A1S4E2I3	2.9e-124	83.54	zinc finger CCCH domain-containing protein 62-like isoform X2 OS=Cucumis melo OX...	[more]

BLAST of ClCG02G013230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66840.1	3.3e-64	48.34	SAP domain-containing protein	[more]
AT5G67070.1	9.1e-22	51.35	ralf-like 34	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003034	SAP domain	PFAM	PF02037	SAP	coord: 217..251 e-value: 3.4E-8 score: 33.1
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 65..103 e-value: 1.2E-7 score: 32.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 411..435
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..200
None	No IPR available	PANTHER	PTHR35323	SAP DOMAIN-CONTAINING PROTEIN	coord: 122..431
None	No IPR available	PANTHER	PTHR35323:SF2	SAP DOMAIN-CONTAINING PROTEIN	coord: 122..431

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G013230.1	ClCG02G013230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process