ClCG02G011190 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG02G011190
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description50S ribosomal protein L2, chloroplastic
LocationCG_Chr02: 23144760 .. 23152168 (-)
RNA-Seq ExpressionClCG02G011190
SyntenyClCG02G011190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACAACAATAACTGTAGACACCGTATTTTGTTCGGCCTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTNTCCAATCTTCAATATCAAATTTCTTCCAAAATAAAATACCATGCGTTAACGCTTTATCATCTATGCGTCAACCTGACTATGTTCCACAGATACATCTAACTTTTAACTAATTCCCAACTATGCCTTCAATTCTTCATTCTCACTCTTAGTGAAATATCCATTCTTTTCCTAATACTATGCGTTCAACTAGTCTTCTTATCGCATAGTGATACTTCCTAAACTTAGTTGACACACTCAAAAGATTTCCTAAGTCCTTAGATCACCTTGCCATTCAAAATCACTTAACATAATTCTTTCCAAACTTCTTAACGCCTTCTTCTTAAACCAAAACTTCAGCTTACAATTCACTCTTTTTCCTTCCATTCATCTCAATGCATAGAATTCCTTGGCCAATAATTCTGCAATTCCGCAAACATAACTTTTCAACCTTAAGAATTTCCTAACTCCACATACTTATAATCTTAGCTCCACTTCTTGTCTTTCTTTTCTTACTAGCCATCATAAGTACCTAGGTTCTGAGATAGGGTATTACACCTTATTGCCGAAGCACTTTAAACCTTGTATTCATTCTTTCTTTTTCTTCTCTTAATCTTGTTTACAAATCATCTTCTGCGCATACAATCTCCATTGAAGTAATCTTCAAATGAGCATTTCAGTTTCCTCGACAACTTCTTTTAGTCTACACCATCAATCCTTGGCTAACAACCAAACAAACACTCACAACTGGTATCAGAGCCATTGAGAGAATTACCAAGAAGCAGTTTCTTGAATCAAAGAATGGCAACAACAATAACTGTAGACACCGTATTTTGTTCGGCCTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTATTTTGGATAACATATATTTTAGATTAGTCTTTTTATAAAAAAAAATGGGTTTAGAAACAAAGTTTTTCCTTAAGTTTTTGAAACTTTTAAAAAGATGTAAATATATATATATATATATATATATATATATATATATATATATATATATATATATTAAAAATGAAAAAAATATTACTTTTCTTCCCTTTTCCCATTCTTCCTCTTTTCCCCATTTCTCTACTTCTCTTCCTTTTCTTCCCCAATTCTCTCCTCTTCTTCATACTTCCTCTATTTCCTCTCTTCCCCATTTCAAATTCCTTACAAAGCTCAACTCTCAACCTTAACACTCCCCTATAAATTGATGGGGATTCACAATGGAAAAAAGGGGGAGAAAACACAAAATGTGGAAGAGTCATTATACACATTGAGGGAGAAATAGACAGGAAGGAATAACTGAGAAAGAGATGATCCCGTAAAAACCTCATTTTCATTAGATGGATCATGCACAATTCCAACGAAACTCACACAAAACCCACTAATACAATGCAGCCCGACAACGTCTTAAACAAACAGGAATTTCCGACGAAGCCCACGAACGGACGACTCCGACAACAAACCTCACACCAACAGTGTTTTAGTGGTGGATATCTTGCATGCTTGCAACTTGGGATGATTTCTTACCTACAGTAAAAGAAAATAAAAGGAGAGAAGTGAAAAAAGAAGTGAAGGAAGAAGAAGAAGTACTTGGACAAGAAAGAAGAAAAGTAAATAAGAAAAAAAAAAAAAAAGATAAAGGTGATGAGTTCCACCCACATTTTTCTCTCTTTATTTGTTGATAATTTATTGGCATTAACTTAATTTTTGAACAAATTCAAAATATGTTTCAATTAATTTATTCTTAAAGACTCCATTGATCTTTTAAAGTAAATTCTAACTTTATTTCCAATTTAAACTTGATTTCTCCTTAATTTGATTCTTCTCATTAGTAGGATTTCAAATCTTCATTTTGTTTTAATCTTCGATTTATGATACAAAATGGATCTCGTTCTATCGTTGATTAGAGATTTCTCTATGAACAATACGAATCGAAGTTTAAAAAAGAGGAAGGAGAAGGAGTCCTCGACCCGCAATAGATAGAGGAGGATTTATTCAATCACATTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTACCTAGAGCAATAGGTGTTGTAGAGAAACTGATTGCAAAAGAGGGGAAATCGGCCACACTAAAATTACCTTCTGGGGAGGTCTGTTTGATATCCAAGAATTGCTCAGCAACAGTCGAACAAGTGGAGAATGCTGGGGTAAACCAGAAAAGTCATGTCTTCATCCATAGGGTCCCAAGTACCCGAATTAATCAAAAGTTCGATTCTATCTGAACTACTCATTTTCAAATGGTATCCACATTGGTCACAAATATTCCATTTTGATTTCAACAATTTCTTATATTTTAATCCATAACAATTTTCGCATTGAACCCACAAATGCTTGTATTTTTTAGTCACATCTAGATCGTTAGAACTTTCTGTTCTAGTTAAATCACTTCCATCCGTGCTAGTTCTTATATTGGAACTCTCACTTTCACTACTATTTCCACTTTCACCACAAATATAACTATAAATGTAATTGTCACTGTAATTGTGACTACCACTTAAAATGTAACTATCAATAGAGATTTGAGCCCGAAGATAACTGTCAATGCAACTATTAATGTGATTGTTCCAACTATATTTAGTATCATACATGTAACGATCATAGTGGGAATCATCACTCTTAGATACATTATTTTGTTTAGGAAACGGAGGCGTGCAAAGGTTTCCTCGAGCCAGACAAAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCTGCCAAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGATGCCGAGTGGAAGGGTCGTTGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATCTTCCCGATAAGCACTTGAAAAGTGCTTTATATTCTCTCAAATTAAGGGAGTTTTATGTTAGATTTCACTTGTTTGCTAGTGATTTTCAGGTTAAAACGAGGAAAATTAGAAGAAACAACTAAAAGATCAAAACCGAGCAAGAATACGGCGAAAAAGAGCTGAAAAACTCAAAAGAACAAATTTTGGGATAGCAATACGGCGCTGAGACGGCGCTGCCGTGGCACTGAAGCATAAATGCATCCTTGTTGAACGCATGGCAGCATCGCGGCGCTGAGACGGCGCTGTCGTGGCACTGAAGTATAATCGCAACAGTTTGGACGCATAGTAACATCGCGGCGCCGGGATGTCGCTGCCTCGACGCATCCTTGTTGAACGCATCCTTGGTAAACGCATGACAGCGTCGCGGCGCTTGGACGGCGCTGCCACAGCGCTAAAACCCGAGAGCAAACTTTTTAGGGTTGAAACGCTAGCGTCGCGGCGCCAGCATTACCTAAATGAAAAATTTGTATTTTAGGTTAAATTTTTGGGCGGTCAAACTCTATAAATTTGGGGGGTTTTCAGCAGCCAAGAGGGGGAAAAAATCAAGAAAAAGCAAGAAAGTTGCAGACCTAAAAAGAGATACAAAAAGGAGAGAATTAAGCAAGAGTTCAAAGAGTGAGTTAGTTGCAAGGAAGAGGAAAAGAGTTCGAGATAGTCTTGGTGCCTTTCGAAGTCCGACGTGAGAGCCAAGGAGTTCGTGACGGTTCTGCCTCAATCAAGAACCTCTTTTCAGTAGAGTTTCCCTTTTCTTTACACTCTTCCTTTGATTATTTTTACTCAAACATGTTGCTTCAAGCTATGAGTGGCTAAACTCTTTAGTTTTAGGGTATTTTATGAATTCATAGTAATTTTGTAGACTCATGGTTTTATTTAAATAATTATGCTTTTCATTATTATTGTGTTTAATTCTTGTGGATTGGCCATCTTCACATGTTAGATTAGATGTATGATTGAGAGATTGTATGTTTAACTTGATCTATAACAATGAATTAATTATTGTTAATCTATCACGAGAGTAGTTAGGTTGACAATAAAAGTTGCTAAAACTATTTTTAATGTCATGTAATTTTGTATTGGTTTTAAGAGATTAATAATCAATCGAGTTGCATGAGAAAGGGTTGTTTTTGAGAGAAAATAACTTGGAATTAAGTTTCTAGACTTAGGCATATGAATTACAATAAAATCCATGAAATCTATAGTATTGCATGATGAAATAAACAAGGATTCATTACCCTAGAACTCTCTTTGACTTTTGTGTTTCTCCCTTTGATACTTTCCTTGTTCGATTTTTCTTTTTCCCTAATTTAAAATATTGAATTTCAATCCTCAAATAAAATTGATTCAATTCTAGAATAGCTAAGTAATTTTAACCTTCCCAATTGGATCTCCAGTGGAACGATACTCGGACTTAACCGTTTTATATTATAACTTGACCCGTATACTTGCGGTTAACACTCAAAGTGCACATCACTTTCCCAAGAGCTCACATCGACGGGAAGGTTTGGCACCTCGATAAAATTAATTTAATAAAATTCAATTTAATTATAATATATTGAATTAATATTAATTTAATTATAATATATTAAATCGTATTTAATATATATAATTAAATAAAATTAATTAATTAACAAATAATTAATTAATAAATTAAATATCACATATTTAATTTAATTTGAATCATATTCAAATAACCTTCTCTCACATAATCTAGATTCATATTAATTTTTACCCTATAGTTTTTACATAAATCTCATAAATATAATTAATATTTAAATCTCATTTAAATATTTATCTCTCTCATAACCTAAAATATAAATTTTGAATCTCATTCAAAATATAACTTTATATTATAATGTATCTATATATTAATTGTATCATGTACAATTAATTCCCTTATTAATTTGAGCAATTCAAATTAATCCAACATAGTTGATTCTCATTCAAACTCTCAATGAACTAGCACGGGGACCTTATGAACTTATAGATTAGAAGCTGCAATGATATGAGATTAATTAATTAAATTAATCAATATTCATTAACTGTAAGTCACTCCACTAAAGACTTACAACTGTATTTTTCGCATTAGAGATATATTTCTATGTCCATAGATATAACCAATCAATAGTAAGTCGACCCTTCACAAATTGCTCGTTAGCCTTGTAGTTACATCTAACTCCCTAAGTATGGTTGATCCCTGTAATAAATAAACAGTTTATAGTCCAACTATAAACTAACCCCTCTCGGGCCAGTTAGAGTGTGAGGCCTCTTTGTTCAAAATCCGGAATCATTCCTTCAGAGAGCAATTTATCTACTTACCTTAAAGATGAGAAGAAGTGAATTTCATCTTGTGAAGATATGTTCCCAGCTCCCTACGCAGACAAATCCCCAAAATGGAAGGCATACTGAGTCGACAATTTGGCCACTCTCGCCCATATCAAAGGATTGTTCTCATAGACAAGAGTTCATAACTCACTCAGAATTAAGGTCGAGTCACCTATGGTCATCCTAAGAAACGTTAATTTCTTTAATTAACAGTGTTACAAGGAGAAACTACACATTTCACGGTCCGGTCTTATACAAACTCTTTGCATAGGATATGAACGATTAAGATTAAATTGTTTGTAGCACTTTACAACTCTTGTAACAATTAAAAGTGGGTCCGTATCCGTAGTGTTACTAGGATAAGGCACCCAACCTTATCCCTATACTATAGACTGTTTTGGTTATTTTTTAAACATCATCCAACCTTGTATGTCAACCATATACATGTTTAATTTTATATTAAATGACCATGGATCTTAGTTTATTGAATTGAGTTAATGCAAAAAACAAATAAAATAACTACTTATTTTAGTGAATAAATAAAATGTTTTTACAATTTTAAAAACTACGAGATTTAGGACACCAATCCCAACATATTTTTGTTTGGAAACTTTTTTGTTATATATATATATATATATATATATATATATATAGTTGTTTTCAAATATAGAAAAATGAACCAAAATATTTACAAATATAGCAAAATTCCACTATCTGTCTACGATACGACTACTATTTGTGTCTATCATGACACATATAGACAAAGATAATAGTCTATTGCGGTCTATCACGATCTATCGCAGATAGACGATGATATTTTGCTATTATTTGTAAATATTTTCAGCAATTTTGTCATTTAAAATAATTTTCCATATATATATTAATAAACTATAAATTGCACTTAATTTTAGTGTTTTTTAAGCACACATGTGTTGTTGGGAGTTTTAGAAATGGGGTTTAGGGTTTACTTTTGGATAATGCATTTCAATTTTTTTTTTTTAATTTAAGCAATTTTACAAATTTGTGCATGTGATGTTTCTAGTCAAGTCATTTTTATTTGAACACTTTTGATAAAAACTTTTTCAAATAAAAACACTCATGTGTGTCTGACAATTTTTTCTCAAAAATGTTTTTACACACAAGTTTGTTTGATTTCTTACATGATAAATCTGATTTTATTAATATTAAATTACTATAAAGAACGACTATGAAATACTATGAACTAATAACCAAAAACAGGGAATTCAACGTTTTGATGATACTTACGTACTTTTGTGTCGCAAATGTATTTTTATCGACAATTTTGTGTGTCAACCTAAATATAAACATTTATTGATGTTATATATGTATTTTTAAATTAATAGTTATTTTTAAACTTTAAATTAAGGTTTTATTGGATGTTTATGTCATGAGGGTCAACCAAACAAAGAACTCATGTGTCAACAAAACTCAAATTTGTAGTAGTCACAATTTAAAATAATGATCATCGAAATTGGTGGAGTGGTCGTAGTTGGAGGTCGTCGAAGTTAGTTGTCAACAGTATTGATTATATGTTGCTAGGAGTTTGTCGTAGGCAGTGGTTGCCGGAGTTAGCTGTAGGAGGTGGCCACCCAAGTTGGTCGCTGGAAATGAGCAACGAGGCATTGGTGCTTATGAGAGCTATGTGCACTGTTGTAGACATGGTATAAAATATGGGTGACATATTGACATTCCAAACAATGAGTTGAGTTCATATTTAAACAACTACTCCCCTTACCCCCAAACATATCATAAATGATTTGAATTTCTAGAGTTTGGAATATAATCCGGGGATTTGAGAAATATTTATATTTACTTGGAGAAGTTATTAGTAAGGTTTGACTAGGATTTATAAATATGGTTTAGCCAAAAAAATATATATATGTATATATATTAACCCACCTCGTAAGGCGTGCGTAGTCCCCCCTTGTTCGTCTCCTTCTTCTTCGTGAGTCTCTTCACACCGTCGACAACCAACGCCACCGGTCGCCGTTTGGCACATCGTCCGCCGTACATTCCAGCGCCCGTTTCTGTCACTGAGAAATCTGATTGA

mRNA sequence

ATGGCAACAACAATAACTGTAGACACCTTTCCTCGACAACTTCTTTTAGTCTACACCATCAATCCTTGGCTAACAACCAAACAAACACTCACAACTGGTATCAGAGCCATTGAGAGAATTACCAAGAAGCAGTTTCTTGAATCAAAGAATGGCAACAACAATAACTGTAGACACCGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTACCTAGAGCAATAGGTGTTGTAGAGAAACTGATTGCAAAAGAGGGGAAATCGGCCACACTAAAATTACCTTCTGGGGAGGTCTGTTTGATATCCAAGAATTGCTCAGCAACAGTCGAACAAGTGGAGAATGCTGGGGAAACGGAGGCGTGCAAAGGTTTCCTCGAGCCAGACAAAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCTGCCAAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGATGCCGAGCGTGCGTAGTCCCCCCTTGTTCGTCTCCTTCTTCTTCGTGAGTCTCTTCACACCGTCGACAACCAACGCCACCGGTCGCCGTTTGGCACATCGTCCGCCGTACATTCCAGCGCCCGTTTCTGTCACTGAGAAATCTGATTGA

Coding sequence (CDS)

ATGGCAACAACAATAACTGTAGACACCTTTCCTCGACAACTTCTTTTAGTCTACACCATCAATCCTTGGCTAACAACCAAACAAACACTCACAACTGGTATCAGAGCCATTGAGAGAATTACCAAGAAGCAGTTTCTTGAATCAAAGAATGGCAACAACAATAACTGTAGACACCGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTACCTAGAGCAATAGGTGTTGTAGAGAAACTGATTGCAAAAGAGGGGAAATCGGCCACACTAAAATTACCTTCTGGGGAGGTCTGTTTGATATCCAAGAATTGCTCAGCAACAGTCGAACAAGTGGAGAATGCTGGGGAAACGGAGGCGTGCAAAGGTTTCCTCGAGCCAGACAAAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCTGCCAAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGATGCCGAGCGTGCGTAGTCCCCCCTTGTTCGTCTCCTTCTTCTTCGTGAGTCTCTTCACACCGTCGACAACCAACGCCACCGGTCGCCGTTTGGCACATCGTCCGCCGTACATTCCAGCGCCCGTTTCTGTCACTGAGAAATCTGATTGA

Protein sequence

MATTITVDTFPRQLLLVYTINPWLTTKQTLTTGIRAIERITKKQFLESKNGNNNNCRHRTAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENAGETEACKGFLEPDKDWPSSAKAEGSLTARPTCQAGTKVGLSDPTMPSVRSPPLFVSFFFVSLFTPSTTNATGRRLAHRPPYIPAPVSVTEKSD
Homology
[Close]
BLAST of ClCG02G011190 vs. NCBI nr
Match: YP_009132900.1 (ribosomal protein L2 [Quercus spinosa] >AKA67027.1 ribosomal protein L2 [Quercus spinosa])

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-18
Identity = 57/73 (78.08%), Postives = 60/73 (82.19%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLGKGGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV N 
Sbjct: 150 TAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNV 209

Query: 120 GETEACKGFLEPD 133
           G  +  K ++EPD
Sbjct: 210 GVNQ--KSWVEPD 220

[Close]
BLAST of ClCG02G011190 vs. NCBI nr
Match: ACU21086.1 (unknown [Glycine max])

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-18
Identity = 57/73 (78.08%), Postives = 59/73 (80.82%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLGKGGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV N 
Sbjct: 137 TAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNV 196

Query: 120 GETEACKGFLEPD 133
           G  +  K  +EPD
Sbjct: 197 GVNQ--KNLVEPD 207

[Close]
BLAST of ClCG02G011190 vs. NCBI nr
Match: YP_009704852.1 (ribosomal protein L2 [Euphrasia regelii] >QCZ36352.1 ribosomal protein L2 [Euphrasia regelii])

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-18
Identity = 55/68 (80.88%), Postives = 56/68 (82.35%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLGKGGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV N 
Sbjct: 137 TAIHNIEITLGKGGQLVRAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNV 196

Query: 120 GETEACKG 128
           G  + C G
Sbjct: 197 GVNQKCLG 204

[Close]
BLAST of ClCG02G011190 vs. NCBI nr
Match: YP_009704838.1 (ribosomal protein L2 [Euphrasia regelii] >QCZ36351.1 ribosomal protein L2 [Euphrasia regelii])

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-18
Identity = 55/68 (80.88%), Postives = 56/68 (82.35%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLGKGGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV N 
Sbjct: 138 TAIHNIEITLGKGGQLVRAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNV 197

Query: 120 GETEACKG 128
           G  + C G
Sbjct: 198 GVNQKCLG 205

[Close]
BLAST of ClCG02G011190 vs. NCBI nr
Match: KAA0063016.1 (ribosomal protein L2 [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 3.6e-18
Identity = 56/68 (82.35%), Postives = 57/68 (83.82%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLGKGGQL RA GVV KLIAKEGKSATLKLPSGEV LISKNCSATV QV NA
Sbjct: 5   TAIHNIEITLGKGGQLARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNA 64

Query: 120 GETEACKG 128
           G  +   G
Sbjct: 65  GVNQKSLG 72

[Close]
BLAST of ClCG02G011190 vs. ExPASy Swiss-Prot
Match: Q4VZK5 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-20
Identity = 55/68 (80.88%), Postives = 56/68 (82.35%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLGKGGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV NA
Sbjct: 137 TAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNA 196

Query: 120 GETEACKG 128
           G  +   G
Sbjct: 197 GVNQKSLG 204

[Close]
BLAST of ClCG02G011190 vs. ExPASy Swiss-Prot
Match: Q14F95 (50S ribosomal protein L2-A, chloroplastic OS=Populus alba OX=43335 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-20
Identity = 54/68 (79.41%), Postives = 56/68 (82.35%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLG+GGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV NA
Sbjct: 138 TAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNA 197

Query: 120 GETEACKG 128
           G  +   G
Sbjct: 198 GVNQKSLG 205

[Close]
BLAST of ClCG02G011190 vs. ExPASy Swiss-Prot
Match: Q14FB6 (50S ribosomal protein L2-B, chloroplastic OS=Populus alba OX=43335 GN=rpl2-B PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-20
Identity = 54/68 (79.41%), Postives = 56/68 (82.35%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLG+GGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV NA
Sbjct: 137 TAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNA 196

Query: 120 GETEACKG 128
           G  +   G
Sbjct: 197 GVNQKSLG 204

[Close]
BLAST of ClCG02G011190 vs. ExPASy Swiss-Prot
Match: A6MM78 (50S ribosomal protein L2, chloroplastic OS=Buxus microphylla OX=153571 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-20
Identity = 54/68 (79.41%), Postives = 55/68 (80.88%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLGKGGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV N 
Sbjct: 135 TAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNV 194

Query: 120 GETEACKG 128
           G  +   G
Sbjct: 195 GANQKSLG 202

[Close]
BLAST of ClCG02G011190 vs. ExPASy Swiss-Prot
Match: Q09MB2 (50S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-20
Identity = 54/68 (79.41%), Postives = 55/68 (80.88%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLGKGGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV N 
Sbjct: 137 TAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNV 196

Query: 120 GETEACKG 128
           G  +   G
Sbjct: 197 GANQKSLG 204

[Close]
BLAST of ClCG02G011190 vs. ExPASy TrEMBL
Match: A0A0E3M7H5 (Ribosomal protein L2 OS=Quercus spinosa OX=167439 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 7.9e-19
Identity = 57/73 (78.08%), Postives = 60/73 (82.19%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLGKGGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV N 
Sbjct: 150 TAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNV 209

Query: 120 GETEACKGFLEPD 133
           G  +  K ++EPD
Sbjct: 210 GVNQ--KSWVEPD 220

[Close]
BLAST of ClCG02G011190 vs. ExPASy TrEMBL
Match: C6TGY4 (Ribosomal_L2_C domain-containing protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.0e-18
Identity = 57/73 (78.08%), Postives = 59/73 (80.82%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLGKGGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV N 
Sbjct: 137 TAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNV 196

Query: 120 GETEACKGFLEPD 133
           G  +  K  +EPD
Sbjct: 197 GVNQ--KNLVEPD 207

[Close]
BLAST of ClCG02G011190 vs. ExPASy TrEMBL
Match: A0A5P1KB01 (50S ribosomal protein L2, chloroplastic OS=Euphrasia regelii OX=374708 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-18
Identity = 55/68 (80.88%), Postives = 56/68 (82.35%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLGKGGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV N 
Sbjct: 137 TAIHNIEITLGKGGQLVRAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNV 196

Query: 120 GETEACKG 128
           G  + C G
Sbjct: 197 GVNQKCLG 204

[Close]
BLAST of ClCG02G011190 vs. ExPASy TrEMBL
Match: A0A5P1KAZ2 (50S ribosomal protein L2, chloroplastic OS=Euphrasia regelii OX=374708 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-18
Identity = 55/68 (80.88%), Postives = 56/68 (82.35%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLGKGGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV N 
Sbjct: 138 TAIHNIEITLGKGGQLVRAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNV 197

Query: 120 GETEACKG 128
           G  + C G
Sbjct: 198 GVNQKCLG 205

[Close]
BLAST of ClCG02G011190 vs. ExPASy TrEMBL
Match: A0A5A7V9A1 (Ribosomal protein L2 (Chloroplast) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001180 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-18
Identity = 56/68 (82.35%), Postives = 57/68 (83.82%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLGKGGQL RA GVV KLIAKEGKSATLKLPSGEV LISKNCSATV QV NA
Sbjct: 5   TAIHNIEITLGKGGQLARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNA 64

Query: 120 GETEACKG 128
           G  +   G
Sbjct: 65  GVNQKSLG 72

[Close]
BLAST of ClCG02G011190 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 98.6 bits (244), Expect = 6.4e-21
Identity = 53/68 (77.94%), Postives = 55/68 (80.88%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLG+GGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV N 
Sbjct: 137 TAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNV 196

Query: 120 GETEACKG 128
           G  +   G
Sbjct: 197 GVNQKSLG 204

[Close]
BLAST of ClCG02G011190 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 98.6 bits (244), Expect = 6.4e-21
Identity = 53/68 (77.94%), Postives = 55/68 (80.88%), Query Frame = 0 

Query: 60  TAIHNIEITLGKGGQLPRAIGVVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 119
           TAIHNIEITLG+GGQL RA G V KLIAKEGKSATLKLPSGEV LISKNCSATV QV N 
Sbjct: 137 TAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNV 196

Query: 120 GETEACKG 128
           G  +   G
Sbjct: 197 GVNQKSLG 204

The following BLAST results are available for this feature:
BLAST of ClCG02G011190 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009132900.11.6e-1878.08ribosomal protein L2 [Quercus spinosa] >AKA67027.1 ribosomal protein L2 [Quercus... [more]
ACU21086.12.1e-1878.08unknown [Glycine max][more]
YP_009704852.12.8e-1880.88ribosomal protein L2 [Euphrasia regelii] >QCZ36352.1 ribosomal protein L2 [Euphr... [more]
YP_009704838.12.8e-1880.88ribosomal protein L2 [Euphrasia regelii] >QCZ36351.1 ribosomal protein L2 [Euphr... [more]
KAA0063016.13.6e-1882.35ribosomal protein L2 [Cucumis melo var. makuwa][more]
BLAST of ClCG02G011190 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q4VZK51.4e-2080.8850S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=... [more]
Q14F953.1e-2079.4150S ribosomal protein L2-A, chloroplastic OS=Populus alba OX=43335 GN=rpl2-A PE=... [more]
Q14FB63.1e-2079.4150S ribosomal protein L2-B, chloroplastic OS=Populus alba OX=43335 GN=rpl2-B PE=... [more]
A6MM783.1e-2079.4150S ribosomal protein L2, chloroplastic OS=Buxus microphylla OX=153571 GN=rpl2-A... [more]
Q09MB23.1e-2079.4150S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=... [more]
BLAST of ClCG02G011190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0E3M7H57.9e-1978.08Ribosomal protein L2 OS=Quercus spinosa OX=167439 GN=rpl2 PE=3 SV=1[more]
C6TGY41.0e-1878.08Ribosomal_L2_C domain-containing protein OS=Glycine max OX=3847 PE=2 SV=1[more]
A0A5P1KB011.4e-1880.8850S ribosomal protein L2, chloroplastic OS=Euphrasia regelii OX=374708 GN=rpl2 P... [more]
A0A5P1KAZ21.4e-1880.8850S ribosomal protein L2, chloroplastic OS=Euphrasia regelii OX=374708 GN=rpl2 P... [more]
A0A5A7V9A11.8e-1882.35Ribosomal protein L2 (Chloroplast) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
BLAST of ClCG02G011190 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00830.16.4e-2177.94ribosomal protein L2 [more]
ATCG01310.16.4e-2177.94ribosomal protein L2 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022669Ribosomal protein L2, C-terminalSMARTSM01382Ribosomal_L2_C_2coord: 48..153
e-value: 1.2E-7
score: 12.2
IPR022669Ribosomal protein L2, C-terminalPFAMPF03947Ribosomal_L2_Ccoord: 56..123
e-value: 7.4E-15
score: 55.2
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 43..116
e-value: 1.2E-20
score: 75.1
IPR002171Ribosomal protein L2PANTHERPTHR13691RIBOSOMAL PROTEIN L2coord: 43..122
NoneNo IPR availablePANTHERPTHR13691:SF42SUBFAMILY NOT NAMEDcoord: 43..122
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 55..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G011190.1ClCG02G011190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003677 DNA binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome