ClCG02G008710 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G008710
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Sodium Bile acid symporter family
Location	CG_Chr02: 11758978 .. 11761434 (+)
RNA-Seq Expression	ClCG02G008710
Synteny	ClCG02G008710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCTATTGTCCATTATTTTTCTCCCTTCACCCTCTTCACATCAATTTGTATTTAATTTTAGGTTGGTTTGAAAGTTTGATGGACTTGTACGTGGGATGGGATTGGAAGATTTTAAAGATAAAATGACAACCAAAATAGAAAAAACAATTTTAACTAAACCGAGCCAACTTGTTCGGTTAAGAAACTAAAACGAGAAGTTTCAATTTTTGCCGATTTGTAAACACCCTTAATTACAGTAATTATTTTATAGTTACGTTCCAATAGTCCAGCTGTCAAAATTAGAGGAAAGTTGCTGACTTTCATTCCCATTCAATAGTTTTATCCCAATCAATCCCCATGCGGGAGTATAGTATTGAGGCTCTACTAGAAATTTTCGGATAGAATAGTGTGCTCACTGTCACTCCTTGCTCAACAGTCCTATGGCGTTGGTGGGAACCAAATCCCTACACAGTCTTCTCGTTTCGTCTCATTGGAGCAATCCACCGGCCTTTTGTTTCCAAATTTCTCGTTTCTCCTCTAATGGCGCACTCTTGCGTACCAGTTCTCTCGCTTTGAATCGTAAACGCCAAATTTATAGTCCCATCAGAGCCTCCGGATTGCCCGATAAGGTTGTGTTCTCTCCCTTTGGATCTTTGTCAATGTTGAAACTCATACATCGATTTCTTTTCCCTGCATGTAATGGCTTTAAGACGAGATTTCATCCCTGTGATTCAGAAAGACGATGGTGGAAGGATAAACGAACCTGCCGGTGTTTCGGGTTCGGAAAATAGGGTTAATTGGTTCAAGGCATTATCGACTTTTGCAAATAATAATTTTCTTCCTCTAGGTAAGTTAAAGACTTATTGTTTCTTATTTCCATTAAATTGAAATTATTGTCAGCTTATCGCACTTTTGTTCCTCAATTCAATATGTAGCTCTTGTCACTGGTGTAGCAGTAGGAGTTGCGAATCCAAGTCTTGGATGTCTTGCTGATAGGTATTATCTCTCAAAGTTAAGCACATTCGGTATATTTGTCGTCTCAGGTTAGGAACCGTTACTAACTATCCACATAAAATGTAGGTTTTGTTCTGTAATCCGTTATTTTATACATGATGTGCTTACGCAGGGTTGACATTGCGTACTTCAGAAATTAGTGCTTCATTGGAGGCATGGCCTGTTGCAGTTTATGGGCTTGTATGATTCTCATTTATAATCTTCCATCATATTTTTTTGCTTGTAAGTTCATTCTTCGAGTTTAGTCGTTATTTTCACATTGTTTATAATTATGTTTTTCCCCCTTCATAATTTTTAATTTTTTTTTTTTTTTTTTTTTTTTTGAAACTGTGGTTTCATTTTTGTATGTGAAAGCCTATGTACAAATTTTCTATTATTGGCAAAGTGACTTTCCATGCATTAAAATTTATTTTGTTATCTGTTTCATCATTTCCTGATGCTCATGTATTTTGAGTGATAATGTGATTTTTGTTACCTGACTTATTATTATTATAGAATTTTATTTATTCATCCTGCTTTTAGCATTTGTTTAACTAGTTTGAAGAGGTTTTCTACAATGCAGTTGGATGTTTAAGTTTTGTACACTGAATTCGGATGCTTGAGTTGCAGATGCTTTTTTCTCTGTGTTGACCTTTTGTAGTGGGGTGTGATGGTTGCTCTTTTAGTAACTAAATGAAGGGATCAAAGAGATTATTACAGATCTTGTTCACTGAGAAATAACTCAAAATTGGATCTTGGTCTTTCTGTGATTGTTCCTTTTTTTAGTAATAAGGATGTTTTCTTGTCTCTCATTTCTTTTACAAATAAATTGAATATCCTTGTTCATGGATAGGTTTTATGGCATACTCAATGCATGGGTATCATTTGCACTGTTGTACTAATTTCAGTATATTTGTTGAGCTTGTATTCACTCTCTCTCTCTATTGTTTTTTTGTCAGGCTTCAATTCTTTTGCTTACTCCATACTTTTCCAGGCTGATATTGCTAATTCATCTTCAACCTCAAGAATTTGTAACAGGTTTCTTTATGAAATTATTTTTAGCCATTGAATGACAGGTTAGAAATTTCATCATATGTCCCTTATACAAAAAAGAGGACCAGTTAGCCATTCAGATTTTCTTGGTCTATCTTCTGCAAAAATTGGAGTTGCTAGCTTCATGATGCAAGTGTCATACTTTTAAACTATCATTTGTTGTGTTTAGAGAAGAAAAATTAGAACTATTACATGCAATTTTAAGACGAGATATAATTTGATAATACTTGCATTAGATGAAAATTCTAAATAGGCTTCTCCTAGAACATGAACATATATTGATATAAGATAAATTTGGAATTGACAATCATAGTTTTATCAAGAGTTTGGTCTAATAAAGATTGGTCAGTGGCCATATTTACTTTACTTAGTGCTCCAGTTAGCCTTAAGGCCCTTAACATTCAATTGACCGTTTGTATGGATAATTGA

mRNA sequence

ATGTGCTATTGTCCATTATTTTTCTCCCTTCACCCTCTTCACATCAATTTGTATTTAATTTTAGGTTGGTTTGAAAGTTTGATGGACTTTCCTATGGCGTTGGTGGGAACCAAATCCCTACACAGTCTTCTCGTTTCGTCTCATTGGAGCAATCCACCGGCCTTTTGTTTCCAAATTTCTCGTTTCTCCTCTAATGGCGCACTCTTGCGTACCAGTTCTCTCGCTTTGAATCGTAAACGCCAAATTTATAGTCCCATCAGAGCCTCCGGATTGCCCGATAAGGTTAAAGACGATGGTGGAAGGATAAACGAACCTGCCGGTGTTTCGGGTTCGGAAAATAGGGTTAATTGGTTCAAGGCATTATCGACTTTTGCAAATAATAATTTTCTTCCTCTAGGTAAGTTAAAGACTTATTCTCTTGTCACTGGTGTAGCAGTAGGAGTTGCGAATCCAAGTCTTGGATGTCTTGCTGATAGGTATTATCTCTCAAAGTTAAGCACATTCGGTATATTTGTCGTCTCAGGGTTGACATTGCGTACTTCAGAAATTAGTGCTTCATTGGAGGCATGGCCTGTTGCAGTTTATGGGCTTGCTTCAATTCTTTTGCTTACTCCATACTTTTCCAGGCTGATATTGCTAATTCATCTTCAACCTCAAGAATTTGTAACAGTTTTATCAAGAGTTTGGTCTAATAAAGATTGGTCAGTGGCCATATTTACTTTACTTAGTGCTCCAGTTAGCCTTAAGGCCCTTAACATTCAATTGACCGTTTGTATGGATAATTGA

Coding sequence (CDS)

ATGTGCTATTGTCCATTATTTTTCTCCCTTCACCCTCTTCACATCAATTTGTATTTAATTTTAGGTTGGTTTGAAAGTTTGATGGACTTTCCTATGGCGTTGGTGGGAACCAAATCCCTACACAGTCTTCTCGTTTCGTCTCATTGGAGCAATCCACCGGCCTTTTGTTTCCAAATTTCTCGTTTCTCCTCTAATGGCGCACTCTTGCGTACCAGTTCTCTCGCTTTGAATCGTAAACGCCAAATTTATAGTCCCATCAGAGCCTCCGGATTGCCCGATAAGGTTAAAGACGATGGTGGAAGGATAAACGAACCTGCCGGTGTTTCGGGTTCGGAAAATAGGGTTAATTGGTTCAAGGCATTATCGACTTTTGCAAATAATAATTTTCTTCCTCTAGGTAAGTTAAAGACTTATTCTCTTGTCACTGGTGTAGCAGTAGGAGTTGCGAATCCAAGTCTTGGATGTCTTGCTGATAGGTATTATCTCTCAAAGTTAAGCACATTCGGTATATTTGTCGTCTCAGGGTTGACATTGCGTACTTCAGAAATTAGTGCTTCATTGGAGGCATGGCCTGTTGCAGTTTATGGGCTTGCTTCAATTCTTTTGCTTACTCCATACTTTTCCAGGCTGATATTGCTAATTCATCTTCAACCTCAAGAATTTGTAACAGTTTTATCAAGAGTTTGGTCTAATAAAGATTGGTCAGTGGCCATATTTACTTTACTTAGTGCTCCAGTTAGCCTTAAGGCCCTTAACATTCAATTGACCGTTTGTATGGATAATTGA

Protein sequence

MCYCPLFFSLHPLHINLYLILGWFESLMDFPMALVGTKSLHSLLVSSHWSNPPAFCFQISRFSSNGALLRTSSLALNRKRQIYSPIRASGLPDKVKDDGGRINEPAGVSGSENRVNWFKALSTFANNNFLPLGKLKTYSLVTGVAVGVANPSLGCLADRYYLSKLSTFGIFVVSGLTLRTSEISASLEAWPVAVYGLASILLLTPYFSRLILLIHLQPQEFVTVLSRVWSNKDWSVAIFTLLSAPVSLKALNIQLTVCMDN

Homology

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BLAST of ClCG02G008710 vs. NCBI nr
Match: XP_038900991.1 (probable sodium/metabolite cotransporter BASS4, chloroplastic [Benincasa hispida])

HSP 1 Score: 320.5 bits (820), Expect = 1.4e-83
Identity = 171/195 (87.69%), Postives = 178/195 (91.28%), Query Frame = 0


Query: 32  MALVGTKSLHSLLVSSHWSNPPAFCFQISRFSSNGALLRTSSLALNRKRQIYSPIRASGL 91
           MALVGTKSLHSLLVSSH SNPPAFC QISR+SSNGA L +SSLALNRKRQIYSPIRA GL
Sbjct: 1   MALVGTKSLHSLLVSSHRSNPPAFCLQISRYSSNGAPLGSSSLALNRKRQIYSPIRACGL 60

Query: 92  PDKVKDDGGRINEPAGVSGSENRVNWFKALSTFANNNFLPLGKLKTYSLVTGVAVGVANP 151
           PDK KDDGGRINEPA VSGSENRV WF+ALSTFANNNFLPL      +LVTGVAVGVANP
Sbjct: 61  PDK-KDDGGRINEPASVSGSENRVTWFEALSTFANNNFLPL------ALVTGVAVGVANP 120

Query: 152 SLGCLADRYYLSKLSTFGIFVVSGLTLRTSEISASLEAWPVAVYGLASILLLTPYFSRLI 211
           SLGCLADRYYLSK STFGIFV+SGLTLRTSEISAS+EAWPVAVYGLASILLLTPYFSRLI
Sbjct: 121 SLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLI 180

Query: 212 LLIHLQPQEFVTVLS 227
           L IHLQPQEFVT L+
Sbjct: 181 LQIHLQPQEFVTGLA 188

[Close]

BLAST of ClCG02G008710 vs. NCBI nr
Match: XP_004151888.1 (probable sodium/metabolite cotransporter BASS4, chloroplastic [Cucumis sativus] >KGN63253.1 hypothetical protein Csa_022589 [Cucumis sativus])

HSP 1 Score: 297.7 bits (761), Expect = 9.5e-77
Identity = 160/195 (82.05%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 32  MALVGTKSLHSLLVSSHWSNPPAFCFQISRFSSNGALLRTSSLALNRKRQIYSPIRASGL 91
           MA VGTKSL+SLLV SH SNPPAF FQIS FSSN ALL ++SLALNRKR+ Y PIRA GL
Sbjct: 3   MAFVGTKSLYSLLVLSHRSNPPAFSFQISHFSSNVALLPSTSLALNRKRRSYCPIRACGL 62

Query: 92  PDKVKDDGGRINEPAGVSGSENRVNWFKALSTFANNNFLPLGKLKTYSLVTGVAVGVANP 151
           PDK KDDGGRINEP  VSGSE RV+WF+ LSTFANNNFLPL      +LVTGVAVGVANP
Sbjct: 63  PDK-KDDGGRINEPTSVSGSEKRVSWFETLSTFANNNFLPL------ALVTGVAVGVANP 122

Query: 152 SLGCLADRYYLSKLSTFGIFVVSGLTLRTSEISASLEAWPVAVYGLASILLLTPYFSRLI 211
           SLGCLADRYYLSK STFGIFV+SGLTLRTSEISAS+EAWPVAVYGL SILLLTPYFSRLI
Sbjct: 123 SLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI 182

Query: 212 LLIHLQPQEFVTVLS 227
           L IHLQPQEFVT L+
Sbjct: 183 LQIHLQPQEFVTGLA 190

[Close]

BLAST of ClCG02G008710 vs. NCBI nr
Match: XP_008455871.1 (PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X1 [Cucumis melo] >TYK24216.1 putative sodium/metabolite cotransporter BASS4 [Cucumis melo var. makuwa])

HSP 1 Score: 292.4 bits (747), Expect = 4.0e-75
Identity = 159/195 (81.54%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 32  MALVGTKSLHSLLVSSHWSNPPAFCFQISRFSSNGALLRTSSLALNRKRQIYSPIRASGL 91
           MA VGTKSL    VSSH SNPPAF FQIS FS N ALLR++SLALNRKRQ YSPIRA GL
Sbjct: 3   MAFVGTKSLFH--VSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRACGL 62

Query: 92  PDKVKDDGGRINEPAGVSGSENRVNWFKALSTFANNNFLPLGKLKTYSLVTGVAVGVANP 151
           PDK KDDGGRINEPA VSGSENRV+W + LSTFANNNFLPL      +LVTGVAVG+ANP
Sbjct: 63  PDK-KDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPL------ALVTGVAVGIANP 122

Query: 152 SLGCLADRYYLSKLSTFGIFVVSGLTLRTSEISASLEAWPVAVYGLASILLLTPYFSRLI 211
           SLGCLADRYYLSK STFGIFV+SGLTLRTSEISAS+EAWPVAVYGL SILLLTPYFSRLI
Sbjct: 123 SLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI 182

Query: 212 LLIHLQPQEFVTVLS 227
           L IHL PQEFVT L+
Sbjct: 183 LQIHLHPQEFVTGLA 188

[Close]

BLAST of ClCG02G008710 vs. NCBI nr
Match: XP_008455872.1 (PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 292.4 bits (747), Expect = 4.0e-75
Identity = 159/195 (81.54%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 32  MALVGTKSLHSLLVSSHWSNPPAFCFQISRFSSNGALLRTSSLALNRKRQIYSPIRASGL 91
           MA VGTKSL    VSSH SNPPAF FQIS FS N ALLR++SLALNRKRQ YSPIRA GL
Sbjct: 3   MAFVGTKSLFH--VSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRACGL 62

Query: 92  PDKVKDDGGRINEPAGVSGSENRVNWFKALSTFANNNFLPLGKLKTYSLVTGVAVGVANP 151
           PDK KDDGGRINEPA VSGSENRV+W + LSTFANNNFLPL      +LVTGVAVG+ANP
Sbjct: 63  PDK-KDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPL------ALVTGVAVGIANP 122

Query: 152 SLGCLADRYYLSKLSTFGIFVVSGLTLRTSEISASLEAWPVAVYGLASILLLTPYFSRLI 211
           SLGCLADRYYLSK STFGIFV+SGLTLRTSEISAS+EAWPVAVYGL SILLLTPYFSRLI
Sbjct: 123 SLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI 182

Query: 212 LLIHLQPQEFVTVLS 227
           L IHL PQEFVT L+
Sbjct: 183 LQIHLHPQEFVTGLA 188

[Close]

BLAST of ClCG02G008710 vs. NCBI nr
Match: KAA0040654.1 (putative sodium/metabolite cotransporter BASS4 [Cucumis melo var. makuwa])

HSP 1 Score: 292.4 bits (747), Expect = 4.0e-75
Identity = 159/195 (81.54%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 32  MALVGTKSLHSLLVSSHWSNPPAFCFQISRFSSNGALLRTSSLALNRKRQIYSPIRASGL 91
           MA VGTKSL    VSSH SNPPAF FQIS FS N ALLR++SLALNRKRQ YSPIRA GL
Sbjct: 3   MAFVGTKSLFH--VSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRACGL 62

Query: 92  PDKVKDDGGRINEPAGVSGSENRVNWFKALSTFANNNFLPLGKLKTYSLVTGVAVGVANP 151
           PDK KDDGGRINEPA VSGSENRV+W + LSTFANNNFLPL      +LVTGVAVG+ANP
Sbjct: 63  PDK-KDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPL------ALVTGVAVGIANP 122

Query: 152 SLGCLADRYYLSKLSTFGIFVVSGLTLRTSEISASLEAWPVAVYGLASILLLTPYFSRLI 211
           SLGCLADRYYLSK STFGIFV+SGLTLRTSEISAS+EAWPVAVYGL SILLLTPYFSRLI
Sbjct: 123 SLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI 182

Query: 212 LLIHLQPQEFVTVLS 227
           L IHL PQEFVT L+
Sbjct: 183 LQIHLHPQEFVTGLA 188

[Close]

BLAST of ClCG02G008710 vs. ExPASy Swiss-Prot
Match: F4IZC4 (Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS4 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-29
Identity = 67/119 (56.30%), Postives = 91/119 (76.47%), Query Frame = 0


Query: 107 GVSGSENRVNWFKALSTFANNNFLPLGKLKTYSLVTGVAVGVANPSLGCLADRYYLSKLS 166
           G+S S  R+ + K L +FA++NFLPL      +LV+GV +G ANP+LGCLAD+Y  +K+S
Sbjct: 87  GISASAQRLYFGKELLSFASDNFLPL------ALVSGVGLGFANPTLGCLADKYSFTKIS 146

Query: 167 TFGIFVVSGLTLRTSEISASLEAWPVAVYGLASILLLTPYFSRLILLIHLQPQEFVTVL 226
           T GIF++SGLTLRT  I A+++ WP+ ++GL SILLLTP FSRLI+L+ LQP+E VT L
Sbjct: 147 TCGIFIISGLTLRTEAIGAAVKGWPLGLFGLISILLLTPSFSRLIMLVQLQPRELVTGL 199

[Close]

BLAST of ClCG02G008710 vs. ExPASy Swiss-Prot
Match: B8AJ09 (Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=BASS4 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.1e-26
Identity = 69/151 (45.70%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 76  LNRKRQIYSPIRASGLPDKVKDDGGRINEPAGVSGSENRVNWFKALSTFANNNFLPLGKL 135
           L R R + +   A+G       DG +   PA  S S        AL  FA +NFLPL   
Sbjct: 48  LRRLRPLRAAAAAAGGASPDGADGAKRPAPAAASSSLG-----AALVGFARSNFLPL--- 107

Query: 136 KTYSLVTGVAVGVANPSLGCLADRYYLSKLSTFGIFVVSGLTLRTSEISASLEAWPVAVY 195
              +L+ G+A+ + +P+LGCLA +Y LSK STFGIF++SGLTLRT E+ A+LEAWP  ++
Sbjct: 108 ---ALIAGIALALMDPTLGCLAHKYSLSKYSTFGIFLISGLTLRTKELGAALEAWPAGLF 167

Query: 196 GLASILLLTPYFSRLILLIHLQPQEFVTVLS 227
           GLASILL TP+ ++ I+ I   P EF+T L+
Sbjct: 168 GLASILLFTPFLAQFIMQIKFFPHEFITGLA 187

[Close]

BLAST of ClCG02G008710 vs. ExPASy Swiss-Prot
Match: Q6ESG1 (Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS4 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.1e-26
Identity = 69/151 (45.70%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 76  LNRKRQIYSPIRASGLPDKVKDDGGRINEPAGVSGSENRVNWFKALSTFANNNFLPLGKL 135
           L R R + +   A+G       DG +   PA  S S        AL  FA +NFLPL   
Sbjct: 48  LRRLRPLRAAAAAAGGASPDGADGAKRPAPAAASSSLG-----AALVGFARSNFLPL--- 107

Query: 136 KTYSLVTGVAVGVANPSLGCLADRYYLSKLSTFGIFVVSGLTLRTSEISASLEAWPVAVY 195
              +L+ G+A+ + +P+LGCLA +Y LSK STFGIF++SGLTLRT E+ A+LEAWP  ++
Sbjct: 108 ---ALIAGIALALMDPTLGCLAHKYSLSKYSTFGIFLISGLTLRTKELGAALEAWPAGLF 167

Query: 196 GLASILLLTPYFSRLILLIHLQPQEFVTVLS 227
           GLASILL TP+ ++ I+ I   P EF+T L+
Sbjct: 168 GLASILLFTPFLAQFIMQIKFFPHEFITGLA 187

[Close]

BLAST of ClCG02G008710 vs. ExPASy TrEMBL
Match: A0A0A0LN64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418880 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 4.6e-77
Identity = 160/195 (82.05%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 32  MALVGTKSLHSLLVSSHWSNPPAFCFQISRFSSNGALLRTSSLALNRKRQIYSPIRASGL 91
           MA VGTKSL+SLLV SH SNPPAF FQIS FSSN ALL ++SLALNRKR+ Y PIRA GL
Sbjct: 3   MAFVGTKSLYSLLVLSHRSNPPAFSFQISHFSSNVALLPSTSLALNRKRRSYCPIRACGL 62

Query: 92  PDKVKDDGGRINEPAGVSGSENRVNWFKALSTFANNNFLPLGKLKTYSLVTGVAVGVANP 151
           PDK KDDGGRINEP  VSGSE RV+WF+ LSTFANNNFLPL      +LVTGVAVGVANP
Sbjct: 63  PDK-KDDGGRINEPTSVSGSEKRVSWFETLSTFANNNFLPL------ALVTGVAVGVANP 122

Query: 152 SLGCLADRYYLSKLSTFGIFVVSGLTLRTSEISASLEAWPVAVYGLASILLLTPYFSRLI 211
           SLGCLADRYYLSK STFGIFV+SGLTLRTSEISAS+EAWPVAVYGL SILLLTPYFSRLI
Sbjct: 123 SLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI 182

Query: 212 LLIHLQPQEFVTVLS 227
           L IHLQPQEFVT L+
Sbjct: 183 LQIHLQPQEFVTGLA 190

[Close]

BLAST of ClCG02G008710 vs. ExPASy TrEMBL
Match: A0A5A7TB17 (Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00080 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.9e-75
Identity = 159/195 (81.54%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 32  MALVGTKSLHSLLVSSHWSNPPAFCFQISRFSSNGALLRTSSLALNRKRQIYSPIRASGL 91
           MA VGTKSL    VSSH SNPPAF FQIS FS N ALLR++SLALNRKRQ YSPIRA GL
Sbjct: 3   MAFVGTKSLFH--VSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRACGL 62

Query: 92  PDKVKDDGGRINEPAGVSGSENRVNWFKALSTFANNNFLPLGKLKTYSLVTGVAVGVANP 151
           PDK KDDGGRINEPA VSGSENRV+W + LSTFANNNFLPL      +LVTGVAVG+ANP
Sbjct: 63  PDK-KDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPL------ALVTGVAVGIANP 122

Query: 152 SLGCLADRYYLSKLSTFGIFVVSGLTLRTSEISASLEAWPVAVYGLASILLLTPYFSRLI 211
           SLGCLADRYYLSK STFGIFV+SGLTLRTSEISAS+EAWPVAVYGL SILLLTPYFSRLI
Sbjct: 123 SLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI 182

Query: 212 LLIHLQPQEFVTVLS 227
           L IHL PQEFVT L+
Sbjct: 183 LQIHLHPQEFVTGLA 188

[Close]

BLAST of ClCG02G008710 vs. ExPASy TrEMBL
Match: A0A5D3DKR1 (Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00180 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.9e-75
Identity = 159/195 (81.54%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 32  MALVGTKSLHSLLVSSHWSNPPAFCFQISRFSSNGALLRTSSLALNRKRQIYSPIRASGL 91
           MA VGTKSL    VSSH SNPPAF FQIS FS N ALLR++SLALNRKRQ YSPIRA GL
Sbjct: 3   MAFVGTKSLFH--VSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRACGL 62

Query: 92  PDKVKDDGGRINEPAGVSGSENRVNWFKALSTFANNNFLPLGKLKTYSLVTGVAVGVANP 151
           PDK KDDGGRINEPA VSGSENRV+W + LSTFANNNFLPL      +LVTGVAVG+ANP
Sbjct: 63  PDK-KDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPL------ALVTGVAVGIANP 122

Query: 152 SLGCLADRYYLSKLSTFGIFVVSGLTLRTSEISASLEAWPVAVYGLASILLLTPYFSRLI 211
           SLGCLADRYYLSK STFGIFV+SGLTLRTSEISAS+EAWPVAVYGL SILLLTPYFSRLI
Sbjct: 123 SLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI 182

Query: 212 LLIHLQPQEFVTVLS 227
           L IHL PQEFVT L+
Sbjct: 183 LQIHLHPQEFVTGLA 188

[Close]

BLAST of ClCG02G008710 vs. ExPASy TrEMBL
Match: A0A1S3C1I1 (probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495958 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.9e-75
Identity = 159/195 (81.54%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 32  MALVGTKSLHSLLVSSHWSNPPAFCFQISRFSSNGALLRTSSLALNRKRQIYSPIRASGL 91
           MA VGTKSL    VSSH SNPPAF FQIS FS N ALLR++SLALNRKRQ YSPIRA GL
Sbjct: 3   MAFVGTKSLFH--VSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRACGL 62

Query: 92  PDKVKDDGGRINEPAGVSGSENRVNWFKALSTFANNNFLPLGKLKTYSLVTGVAVGVANP 151
           PDK KDDGGRINEPA VSGSENRV+W + LSTFANNNFLPL      +LVTGVAVG+ANP
Sbjct: 63  PDK-KDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPL------ALVTGVAVGIANP 122

Query: 152 SLGCLADRYYLSKLSTFGIFVVSGLTLRTSEISASLEAWPVAVYGLASILLLTPYFSRLI 211
           SLGCLADRYYLSK STFGIFV+SGLTLRTSEISAS+EAWPVAVYGL SILLLTPYFSRLI
Sbjct: 123 SLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI 182

Query: 212 LLIHLQPQEFVTVLS 227
           L IHL PQEFVT L+
Sbjct: 183 LQIHLHPQEFVTGLA 188

[Close]

BLAST of ClCG02G008710 vs. ExPASy TrEMBL
Match: A0A1S3C366 (probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495958 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.9e-75
Identity = 159/195 (81.54%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 32  MALVGTKSLHSLLVSSHWSNPPAFCFQISRFSSNGALLRTSSLALNRKRQIYSPIRASGL 91
           MA VGTKSL    VSSH SNPPAF FQIS FS N ALLR++SLALNRKRQ YSPIRA GL
Sbjct: 3   MAFVGTKSLFH--VSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRACGL 62

Query: 92  PDKVKDDGGRINEPAGVSGSENRVNWFKALSTFANNNFLPLGKLKTYSLVTGVAVGVANP 151
           PDK KDDGGRINEPA VSGSENRV+W + LSTFANNNFLPL      +LVTGVAVG+ANP
Sbjct: 63  PDK-KDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPL------ALVTGVAVGIANP 122

Query: 152 SLGCLADRYYLSKLSTFGIFVVSGLTLRTSEISASLEAWPVAVYGLASILLLTPYFSRLI 211
           SLGCLADRYYLSK STFGIFV+SGLTLRTSEISAS+EAWPVAVYGL SILLLTPYFSRLI
Sbjct: 123 SLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI 182

Query: 212 LLIHLQPQEFVTVLS 227
           L IHL PQEFVT L+
Sbjct: 183 LQIHLHPQEFVTGLA 188

[Close]

BLAST of ClCG02G008710 vs. TAIR 10
Match: AT3G56160.1 (Sodium Bile acid symporter family )

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-30
Identity = 67/119 (56.30%), Postives = 91/119 (76.47%), Query Frame = 0


Query: 107 GVSGSENRVNWFKALSTFANNNFLPLGKLKTYSLVTGVAVGVANPSLGCLADRYYLSKLS 166
           G+S S  R+ + K L +FA++NFLPL      +LV+GV +G ANP+LGCLAD+Y  +K+S
Sbjct: 87  GISASAQRLYFGKELLSFASDNFLPL------ALVSGVGLGFANPTLGCLADKYSFTKIS 146

Query: 167 TFGIFVVSGLTLRTSEISASLEAWPVAVYGLASILLLTPYFSRLILLIHLQPQEFVTVL 226
           T GIF++SGLTLRT  I A+++ WP+ ++GL SILLLTP FSRLI+L+ LQP+E VT L
Sbjct: 147 TCGIFIISGLTLRTEAIGAAVKGWPLGLFGLISILLLTPSFSRLIMLVQLQPRELVTGL 199

The following BLAST results are available for this feature:

BLAST of ClCG02G008710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900991.1	1.4e-83	87.69	probable sodium/metabolite cotransporter BASS4, chloroplastic [Benincasa hispida...	[more]
XP_004151888.1	9.5e-77	82.05	probable sodium/metabolite cotransporter BASS4, chloroplastic [Cucumis sativus] ...	[more]
XP_008455871.1	4.0e-75	81.54	PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform...	[more]
XP_008455872.1	4.0e-75	81.54	PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform...	[more]
KAA0040654.1	4.0e-75	81.54	putative sodium/metabolite cotransporter BASS4 [Cucumis melo var. makuwa]	[more]

BLAST of ClCG02G008710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IZC4	2.0e-29	56.30	Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Arabidopsis tha...	[more]
B8AJ09	6.1e-26	45.70	Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa su...	[more]
Q6ESG1	6.1e-26	45.70	Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa su...	[more]

BLAST of ClCG02G008710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN64	4.6e-77	82.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418880 PE=4 SV=1	[more]
A0A5A7TB17	1.9e-75	81.54	Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A5D3DKR1	1.9e-75	81.54	Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3C1I1	1.9e-75	81.54	probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X2 OS=Cucu...	[more]
A0A1S3C366	1.9e-75	81.54	probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X1 OS=Cucu...	[more]

BLAST of ClCG02G008710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56160.1	1.4e-30	56.30	Sodium Bile acid symporter family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038770	Sodium/solute symporter superfamily	GENE3D	1.20.1530.20		coord: 114..254 e-value: 3.1E-8 score: 35.0
None	No IPR available	PANTHER	PTHR18640:SF12	SODIUM/METABOLITE COTRANSPORTER BASS4, CHLOROPLASTIC-RELATED	coord: 64..226
IPR016833	Putative sodium bile acid cotransporter	PANTHER	PTHR18640	SOLUTE CARRIER FAMILY 10 MEMBER 7	coord: 64..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G008710.2	ClCG02G008710.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane