Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAATAATTGCTTCAAAAGCAACAAAGTGATGGCGCAAGACGAGCCTGATGATCTTTTGCCTCCTACCGAAGTTAAGAAAGTTGAGGAAAAATCGCCGGCTGGATCGGCAATGGCGAAGCCGAAGACGGCAGAGGCGAGAGCCGGTGGTGCGAGTAAGAAGGTAGTGAGGTTTAAGCTACAAGAAGAAGAGGAGAAAAATTCCGGCGGAAGTGGCAGCGATGCTGGAGTACTGAGGATTAAAGTGGTGATGTCTCAGAAAGAGTTGAAACAGATGTTGACGGATAGAGAGAACAATTCGTGTACATTGGAGGAATTGATTGCTGAATTGAAGGTGAGAGGCAGAACGACGATTTCAGATGCGAGAATCGATCAAGTTGAAGATGAAAATGGAAGCTGGAAGCCGGATCTGGAATCTATTCCTGAAGGTCTCCATTAA
mRNA sequence
ATGGGGAATAATTGCTTCAAAAGCAACAAAGTGATGGCGCAAGACGAGCCTGATGATCTTTTGCCTCCTACCGAAGTTAAGAAAGTTGAGGAAAAATCGCCGGCTGGATCGGCAATGGCGAAGCCGAAGACGGCAGAGGCGAGAGCCGGTGGTGCGAGTAAGAAGGTAGTGAGGTTTAAGCTACAAGAAGAAGAGGAGAAAAATTCCGGCGGAAGTGGCAGCGATGCTGGAGTACTGAGGATTAAAGTGGTGATGTCTCAGAAAGAGTTGAAACAGATGTTGACGGATAGAGAGAACAATTCGTGTACATTGGAGGAATTGATTGCTGAATTGAAGGTGAGAGGCAGAACGACGATTTCAGATGCGAGAATCGATCAAGTTGAAGATGAAAATGGAAGCTGGAAGCCGGATCTGGAATCTATTCCTGAAGGTCTCCATTAA
Coding sequence (CDS)
ATGGGGAATAATTGCTTCAAAAGCAACAAAGTGATGGCGCAAGACGAGCCTGATGATCTTTTGCCTCCTACCGAAGTTAAGAAAGTTGAGGAAAAATCGCCGGCTGGATCGGCAATGGCGAAGCCGAAGACGGCAGAGGCGAGAGCCGGTGGTGCGAGTAAGAAGGTAGTGAGGTTTAAGCTACAAGAAGAAGAGGAGAAAAATTCCGGCGGAAGTGGCAGCGATGCTGGAGTACTGAGGATTAAAGTGGTGATGTCTCAGAAAGAGTTGAAACAGATGTTGACGGATAGAGAGAACAATTCGTGTACATTGGAGGAATTGATTGCTGAATTGAAGGTGAGAGGCAGAACGACGATTTCAGATGCGAGAATCGATCAAGTTGAAGATGAAAATGGAAGCTGGAAGCCGGATCTGGAATCTATTCCTGAAGGTCTCCATTAA
Protein sequence
MGNNCFKSNKVMAQDEPDDLLPPTEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVVRFKLQEEEEKNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKVRGRTTISDARIDQVEDENGSWKPDLESIPEGLH
Homology
BLAST of ClCG02G008690 vs. NCBI nr
Match:
XP_038902397.1 (uncharacterized protein LOC120089037 [Benincasa hispida])
HSP 1 Score: 235.7 bits (600), Expect = 2.5e-58
Identity = 125/144 (86.81%), Postives = 127/144 (88.19%), Query Frame = 0
Query: 1 MGNNCFKSNKVMAQDEPDDLLPPTEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVVRFK 60
MGNNCFKSNKVMAQDEP+DLLPP E KKVEEK GSAMAKPKTAEAR GGASKKVVRFK
Sbjct: 1 MGNNCFKSNKVMAQDEPEDLLPPIEAKKVEEKPRPGSAMAKPKTAEARTGGASKKVVRFK 60
Query: 61 LQEEEEKNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKVRGRTTIS 120
LQEEEEKNSG D GVLRIKVVMSQKELKQML DRENNSCTLEELI ELKV+GRTTIS
Sbjct: 61 LQEEEEKNSG----DGGVLRIKVVMSQKELKQMLKDRENNSCTLEELITELKVKGRTTIS 120
Query: 121 DARIDQVEDENGSWKPDLESIPEG 145
D RID VEDENG WKPDLE IPEG
Sbjct: 121 DGRIDAVEDENGRWKPDLEGIPEG 140
BLAST of ClCG02G008690 vs. NCBI nr
Match:
KAG6570883.1 (hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 190.7 bits (483), Expect = 9.2e-45
Identity = 112/153 (73.20%), Postives = 125/153 (81.70%), Query Frame = 0
Query: 1 MGNNCFKSNKVMAQDEPDDLL---PPTEVKKVEEKSPAGSAMAKPKTAEARAGGAS-KKV 60
MGN+CFKSNKVMAQDE L PP E KKVEEK AGSAMAKPKTAE R+G A+ KKV
Sbjct: 1 MGNSCFKSNKVMAQDESCLALSNSPPVEAKKVEEKPVAGSAMAKPKTAEERSGAAAGKKV 60
Query: 61 VRFKLQEEEEKNSGGSGSD---AGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKV 120
VRFKLQEE+E NSGGSG D AGVLRIKVVMSQ+ELKQ+L + EN+S +LEELIAE KV
Sbjct: 61 VRFKLQEEDE-NSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEFKV 120
Query: 121 RGRTTISDARIDQVEDENGSWKPDLESIPEGLH 147
+GRTT+SDA D+VEDENGS +P LE IPEGLH
Sbjct: 121 KGRTTVSDAITDEVEDENGSRRPALECIPEGLH 152
BLAST of ClCG02G008690 vs. NCBI nr
Match:
XP_022140639.1 (uncharacterized protein LOC111011249 [Momordica charantia])
HSP 1 Score: 156.0 bits (393), Expect = 2.5e-34
Identity = 94/148 (63.51%), Postives = 111/148 (75.00%), Query Frame = 0
Query: 4 NCFKSNKVMAQDE-----PDDLLPPTEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVVR 63
NC ++N+VMAQDE P+ L T KVE+K AGSA+A+PKT EAR KKVVR
Sbjct: 45 NCLRNNRVMAQDEACSPSPNSSLTETNY-KVEDKPAAGSALARPKTEEARIAARRKKVVR 104
Query: 64 FKLQEEEEKNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKVRGRTT 123
F Q+ E++ SGG G GVLRIKVV+SQKELKQ+L DRE+NS TLEEL+AELK++GR T
Sbjct: 105 F--QQREDEISGGGG---GVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGR-T 164
Query: 124 ISDARIDQVEDENGSWKPDLESIPEGLH 147
ISDAR D EDENGSW+P LESIPE LH
Sbjct: 165 ISDARADNEEDENGSWRPALESIPEDLH 185
BLAST of ClCG02G008690 vs. NCBI nr
Match:
KGN63254.1 (hypothetical protein Csa_022493 [Cucumis sativus])
HSP 1 Score: 150.6 bits (379), Expect = 1.1e-32
Identity = 95/151 (62.91%), Postives = 105/151 (69.54%), Query Frame = 0
Query: 1 MGNNCFKSNKVMAQDEPDDLLPP---TEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVV 60
MGN CFKSNKVMAQD+ D PP E KKV+++ GSAMAKPK G A KKVV
Sbjct: 1 MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPK--NGTGGAAGKKVV 60
Query: 61 RFKLQEEEE----KNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKV 120
RF LQEEE+ +NSG SG GVLRIKVV+SQKELKQ+L RENNSC+LEELI ELKV
Sbjct: 61 RFNLQEEEKDEEGRNSGDSG--PGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKV 120
Query: 121 RGRTTISDARIDQVEDENGSWKPDLESIPEG 145
+GR T A DE GSWKP LE IPEG
Sbjct: 121 KGRATTVSA------DETGSWKPALECIPEG 141
BLAST of ClCG02G008690 vs. NCBI nr
Match:
TYK24218.1 (hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa])
HSP 1 Score: 147.5 bits (371), Expect = 8.9e-32
Identity = 93/151 (61.59%), Postives = 105/151 (69.54%), Query Frame = 0
Query: 1 MGNNCFKSNKVMAQDEPDDLLPP---TEVKKVEEKS-PAGSAMAKPKTAEARAGGASKKV 60
MGN CF++NKVMAQD+ D LPP E +KVEE+ GSAMAKPK G A KKV
Sbjct: 1 MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPK--NGTGGAAGKKV 60
Query: 61 VRFKLQEEE---EKNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKV 120
VRF LQEEE E + G S AGVLRIKVV+SQKELK++L +RENNSC+LEELI ELKV
Sbjct: 61 VRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKV 120
Query: 121 RGRTTISDARIDQVEDENGSWKPDLESIPEG 145
+GR T V DE GSWKP LE IPEG
Sbjct: 121 KGRAT-------TVSDEIGSWKPALECIPEG 142
BLAST of ClCG02G008690 vs. ExPASy TrEMBL
Match:
A0A6J1CG85 (uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011249 PE=4 SV=1)
HSP 1 Score: 156.0 bits (393), Expect = 1.2e-34
Identity = 94/148 (63.51%), Postives = 111/148 (75.00%), Query Frame = 0
Query: 4 NCFKSNKVMAQDE-----PDDLLPPTEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVVR 63
NC ++N+VMAQDE P+ L T KVE+K AGSA+A+PKT EAR KKVVR
Sbjct: 45 NCLRNNRVMAQDEACSPSPNSSLTETNY-KVEDKPAAGSALARPKTEEARIAARRKKVVR 104
Query: 64 FKLQEEEEKNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKVRGRTT 123
F Q+ E++ SGG G GVLRIKVV+SQKELKQ+L DRE+NS TLEEL+AELK++GR T
Sbjct: 105 F--QQREDEISGGGG---GVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGR-T 164
Query: 124 ISDARIDQVEDENGSWKPDLESIPEGLH 147
ISDAR D EDENGSW+P LESIPE LH
Sbjct: 165 ISDARADNEEDENGSWRPALESIPEDLH 185
BLAST of ClCG02G008690 vs. ExPASy TrEMBL
Match:
A0A0A0LQE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1)
HSP 1 Score: 150.6 bits (379), Expect = 5.1e-33
Identity = 95/151 (62.91%), Postives = 105/151 (69.54%), Query Frame = 0
Query: 1 MGNNCFKSNKVMAQDEPDDLLPP---TEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVV 60
MGN CFKSNKVMAQD+ D PP E KKV+++ GSAMAKPK G A KKVV
Sbjct: 1 MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPLPGSAMAKPK--NGTGGAAGKKVV 60
Query: 61 RFKLQEEEE----KNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKV 120
RF LQEEE+ +NSG SG GVLRIKVV+SQKELKQ+L RENNSC+LEELI ELKV
Sbjct: 61 RFNLQEEEKDEEGRNSGDSG--PGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKV 120
Query: 121 RGRTTISDARIDQVEDENGSWKPDLESIPEG 145
+GR T A DE GSWKP LE IPEG
Sbjct: 121 KGRATTVSA------DETGSWKPALECIPEG 141
BLAST of ClCG02G008690 vs. ExPASy TrEMBL
Match:
A0A5D3DKZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00200 PE=4 SV=1)
HSP 1 Score: 147.5 bits (371), Expect = 4.3e-32
Identity = 93/151 (61.59%), Postives = 105/151 (69.54%), Query Frame = 0
Query: 1 MGNNCFKSNKVMAQDEPDDLLPP---TEVKKVEEKS-PAGSAMAKPKTAEARAGGASKKV 60
MGN CF++NKVMAQD+ D LPP E +KVEE+ GSAMAKPK G A KKV
Sbjct: 1 MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPK--NGTGGAAGKKV 60
Query: 61 VRFKLQEEE---EKNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKV 120
VRF LQEEE E + G S AGVLRIKVV+SQKELK++L +RENNSC+LEELI ELKV
Sbjct: 61 VRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKV 120
Query: 121 RGRTTISDARIDQVEDENGSWKPDLESIPEG 145
+GR T V DE GSWKP LE IPEG
Sbjct: 121 KGRAT-------TVSDEIGSWKPALECIPEG 142
BLAST of ClCG02G008690 vs. ExPASy TrEMBL
Match:
A0A6J1B1M6 (uncharacterized protein LOC110423293 OS=Herrania umbratica OX=108875 GN=LOC110423293 PE=4 SV=1)
HSP 1 Score: 79.0 bits (193), Expect = 1.9e-11
Identity = 57/143 (39.86%), Postives = 81/143 (56.64%), Query Frame = 0
Query: 4 NCFKSNKVMAQ-DEPDDLLPPTEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVVRFKLQ 63
NC SNK++AQ D+P+ EV + K A A+ KK+VRFKL
Sbjct: 3 NCLTSNKIVAQNDQPEPQGCRAEVIEETGKVTASKLERAEVAADEGEKVKKKKMVRFKLN 62
Query: 64 EEEEKNSGGSG-SDAGVLRIKVVMSQKELKQMLTDREN-NSCTLEELIAELKVRGRTTIS 123
EE + + G G S GV+RI++V++QKELKQ+L+ RE+ +LE LI +K+RG
Sbjct: 63 EENDVDGGRQGESKDGVVRIRLVVTQKELKQILSSREDLKHTSLEGLIRVMKLRGVRISE 122
Query: 124 DARIDQVEDENGSWKPDLESIPE 144
R + + +G W+P LESIPE
Sbjct: 123 GGRTNDDDGFHGGWRPALESIPE 145
BLAST of ClCG02G008690 vs. ExPASy TrEMBL
Match:
A0A4V3WQ11 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_029836 PE=4 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 3.2e-11
Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 0
Query: 4 NCFKSNKVMAQDEPDDLLPPTEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVVRFKL-- 63
NC SNK++ QDE D+ P E + +E + G KK VRFKL
Sbjct: 3 NCVTSNKILGQDEKDE--QPREERAIER-------------SVRHVDGGKKKSVRFKLHE 62
Query: 64 -QEEEEKNSGGSG------SDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKVR 123
+EEEE+ G+G S G +RI+VV++Q+EL ++L + S ++E+++ E+K++
Sbjct: 63 EEEEEEEEEDGNGEERQGCSKGGAVRIRVVVTQRELIRILNTKSKYS-SVEQMLGEMKLK 122
Query: 124 GRTTISDARIDQVEDENGSWKPDLESIPE 144
R IS R E NGSW+P LESIPE
Sbjct: 123 SR-KISQIRSSDDEGTNGSWRPALESIPE 134
BLAST of ClCG02G008690 vs. TAIR 10
Match:
AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 57.0 bits (136), Expect = 1.5e-08
Identity = 49/142 (34.51%), Postives = 78/142 (54.93%), Query Frame = 0
Query: 4 NCFKSNKVMAQDEPDDLLPPTEVKKVEEKSPAGSAMAKPKTAEARAGGASKKVVRFKLQE 63
NC + + +A+ E DDL P VK +EE KT+ F+ +E
Sbjct: 3 NCLRHDNGVARKEKDDLDPEPLVKLLEE----------GKTS-------------FRGEE 62
Query: 64 EEEKNSGGSGSDAGVLRIKVVMSQKELKQMLTDRENNSCTLEELIAELKVRGRTTISDAR 123
E E++ + ++ V+RIKVV+++KEL+Q+L +N ++++L+ LK GR IS A
Sbjct: 63 ESERS---TEEESKVVRIKVVVTKKELRQIL-GHKNGINSIQQLVHVLKDSGR-NISMAS 116
Query: 124 IDQVEDENG--SWKPDLESIPE 144
++ E E G +W+P LESIPE
Sbjct: 123 YEEDEKEEGDENWRPTLESIPE 116
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038902397.1 | 2.5e-58 | 86.81 | uncharacterized protein LOC120089037 [Benincasa hispida] | [more] |
KAG6570883.1 | 9.2e-45 | 73.20 | hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022140639.1 | 2.5e-34 | 63.51 | uncharacterized protein LOC111011249 [Momordica charantia] | [more] |
KGN63254.1 | 1.1e-32 | 62.91 | hypothetical protein Csa_022493 [Cucumis sativus] | [more] |
TYK24218.1 | 8.9e-32 | 61.59 | hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CG85 | 1.2e-34 | 63.51 | uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
A0A0A0LQE9 | 5.1e-33 | 62.91 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1 | [more] |
A0A5D3DKZ8 | 4.3e-32 | 61.59 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1B1M6 | 1.9e-11 | 39.86 | uncharacterized protein LOC110423293 OS=Herrania umbratica OX=108875 GN=LOC11042... | [more] |
A0A4V3WQ11 | 3.2e-11 | 37.58 | Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0298... | [more] |
Match Name | E-value | Identity | Description | |
AT3G21680.1 | 1.5e-08 | 34.51 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... | [more] |