ClCG02G008520 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G008520
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	PMD domain-containing protein
Location	CG_Chr02: 11106127 .. 11109644 (+)
RNA-Seq Expression	ClCG02G008520
Synteny	ClCG02G008520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTATTTAGCTGCTTTTCTTTCCTACTGGTTGTGCGTGTTTGTGTTTCCTGACAAACAAATTTTTATTCGTTCGGAGGTCTTTAAGGCAACTAATCTTATGGCTGTCTTGGCTAATATAATTTTGTGCTATATTTTTGGCCCTGTTCCTGTCTTGGCTAATATTTATAGTGGGCTGCGCCAGATTCACAATGCTTTTCCTTTTGCTGGTTATTCAAATGCATGCTTTCCCTTGCACTATATTCATGGATGGCTTGCCCTTTATTTCAATACACATTATAGAGTTCCAACAGATGTTAGGGGTTCACTAATAGTTGGATTTTCTAGCAAAGGTGGAGCCAAATACTATACTAACTTTCAAGCTCGTGTACATATTCACAAAGGGAAATATGTATCCTGGCATGCATGTCTTTTAAAAGACGACGAAAAGTTGACTTATTGGCTTTCTTCATTCTTCGTGAGCATTGGATCCTGCTTCTTATCCTCACGGTGTGGGTCTTCCATGGTCATTGAGGCGTATAATCCTCACCGATTTGGTTGACAACTTGGATTTTACCAAGATGTTTCGTATGACCTGGGTAGGAAAATCCCTAAAGCTAATTTTGCCAATGTGTTGCGCCATTGAATGATATGCGTTTGTGAAAATACATTGTCTTAAGTATATCTTCTTGCACGTGCATTAAACCTGCATACTCACGTTACTTCCCACTATAGAAACTGGTGGACAGCAAACCATGGCAATTATCTTGAAGAAGGGATACAACATTTGGTAGATAGCTGCTCTTCTTCTCTTGCCAAACCTAAATTTCCCAAGAAGACCAAAAATAACTATGGAGGCAAACAAATTCACATGCTTGAAACTGGTAGGTGATAACTTGTAGAAATACAAGTTATTGTACTCTTTATTTGGAATAATTGAGGCAATATTGAAGATAAACGTATGAATTTGAGAGTTAAATTGTGTAATATGGATAAATTTACGTTTACTATGTTTACAAAAGCATCTATCTTGAAAATTATGAATTTTGTATCTTTTTGAACGTGGGATAAAGCTAATAGAGACAAAAAAAACACCCAAAGGGTGAAAGAAAAGATGTTGCAGAATCATAAAGGCCACACGATTCTAAAGATCAGTGCATCGAAAACCAAGCATCAAGAAGAAATATAACTTAGACGCATGGGCGGCAACTGTTATGTCAAATGTGCAAGTGAGAAACTGATTTAACCAGACTATGACAAAACCAATGAACCTATGACGCAATGAAGTCTGCGCAGCAGGGCATGGAATTAAATGCAAAGGTACGGTCATCATGAGATTACCTTTTTGGATGCCTATAAATAGCCCGAGGAATTTCATGCTGGGGGAGAGAGAAAATAGTGGGTAAAAAGCTCTACTCAAATTCTCCCTTAACCTCCATCATCTCCTTTTACTTCGAGTTCTTCTATGAGAAGATTCTAAAAGTTTCAGAGTCGCCTCTCAGAGAGTGAGAATCCATTCACCTCCTGTGCAAATTTGTATCAAACATCCACCATCTCAAGCCTCCAAGGAGCAAGATATTGCCATTGGCAGTTTGACGACTTTTATTTCTAATTTTCCATTATATTCACCTTTTTCATTTTTGTATTTTGATCATGATAATCGAAAGATTTAATTTATTTCCTTAATATAAGTTTGGTTGAATTTATACTTCCATCTCTAATCATCTTCAACACTCTCCACGAAGAATGATCGAATGTTTTTATGGGTTAAGTGCATGAAACTAGCATTTTCCAAGTTTCACCTAAGTTTTCTTTCATCTTGTTTAAATGGGTGCTTTAAAACTTGCATAAATCTATAGAAAAAATAGGTTTAAGGAAGCGACAAACTGCTTGAGAGAGTAAGTAATTAATCTTTGTCATTTAACAAAAAAAGAAATGGATTTAGAGATAAAGTTCAACTTTTGCACGAAGAATTCACCATGCTTCTTAGAGATAAGACTAATGTGGTGTTGAAGCATTGAGAGATGCGTTCTCAATCTCGAGTTTGGTAGCATGAATGCATACTTAAGTAACACTTAGAAATATGCTAGCGAAGTTATCTCAAACCTACTTTTGCCATAGATTCATCCATCTCCACGCATGTTGTCTGAACATATTTATACTTGACAAATTCATCCATTTCCATCCCACATCACCACTCTTTATATTCATCTGCCAATTTATTGATGTATAAAGTTAATCTTTTTAGTTACTCTAAAGATGATTCAAACACATTTAAAATACTTGTAAATATTTGTATAGATCAATACATTAAATCAATAAATTTTCTTAACACCGAATTATTGCAAATCACTACGTTCGACCCTAGACTCCCCAGGAAACCTATTTAAACTTACACTTGGGTTTTTATAGGAAAACTTGCTTATTATTAATGAATTAATCATTAGCATTTTCAACGCGGTGTTAGGCTAGTCGATGCATCATACATCATGCAACAAGTTTTCGCAACAATAGGCTTACCTCTAGGCATACTAAAGAAAGTGAAAGCAGTAATGAAGACCATCATTGGAAAGAACCAAGAGGTCTGACAAATAGCCAATTTGCAAAGAAGGACTTTTGGACGGGGTCCCTAGTGCTTTAGAGCTTTTTGATATCACTGCCCTCGTGGTAAGTGTTTCATATCATATTTTTTTAACCCTTTTTCACAAGTCAAAGTTCCATCTATTTTCTTATTATTACCTTTGTTTTTTATAGTCACCTTTGGATGATTGCATCCTAGACATTGGAGAAATATTGAAATCTTTTGTGAGTCCAGATGGTTATAACTCTACATTCGCTCATGTTGGCAACCCTAAAGCACCAATGGACACACTTATGACTTCAACCTGACCTCTTGTGATCAAAGAACGTCTCGGGGAGGCGCAAAAGACAATGTCCCTGGCTGCTTCTAAGGCTTCCCATTTTTGTGTTGTCGATGTAATTTCTAATGTTCGATGTCACTTTGTTTTGGCCATGTGGGAGACAATACATAAGAAAATCATGCAAAATCCTTTTGACAAAGTTCTTTACCTTGAAGATGAAACTCGCAAGATATTTAAGGCGATTTCTGACATTCATGGTGATAACCTTCATCCTCACAAAAAATTCGTTGATGAATATTTTCAAAAGGTAGAGTAGTATAACCAATACCAATCACCATTTTCTTCCCAATTGACTCCAGCAAATAAAAGTTAGCGACTAGAGAAAGCCAAGTTTAACTTAGAGAAGGTACTATATGATGAAAGCAGTACACTTGCCAAGAAGAATACACTTCTGGAGCGTGCTGCAGAGGCATTGCAGGAAGAAGAAGAATTGACAATCAAGCTAGAAGCTGTCAAAACTAAACAAATTGAGATGTTTAAGCTGATTTTTTAGAGTGATGAACTTTTAAATCAACATAATCTAAAAGCTTCTAAAATGCGGGAAACTATAAGTAATGTTGAAAGTACTCCTGCTCTCAGTGACAAAGACACCAAAGCTGGTGTTGTTTCTTTCAAA

mRNA sequence

ATGACTTATTTAGCTGCTTTTCTTTCCTACTGGTTGTGCGTGTTTGTGTTTCCTGACAAACAAATTTTTATTCGTTCGGAGGTCTTTAAGGCAACTAATCTTATGGCTGTCTTGGCTAATATAATTTTGTGCTATATTTTTGGCCCTGTTCCTGTCTTGGCTAATATTTATAGTGGGCTGCGCCAGATTCACAATGCTTTTCCTTTTGCTGGTTATTCAAATGCATGCTTTCCCTTGCACTATATTCATGGATGGCTTGCCCTTTATTTCAATACACATTATAGAGTTCCAACAGATGTTAGGGGTTCACTAATAGTTGGATTTTCTAGCAAAGGTGGAGCCAAATACTATACTAACTTTCAAGCTCGTGTACATATTCACAAAGGGAAATATGTATCCTGGCATGCATGTCTTTTAAAAGACGACGAAAAGTTGACTTATTGGCTTTCTTCATTCTTCGTGAGCATTGGATCCTGCTTCTTATCCTCACGGTGTGGGTCTTCCATGGTCATTGAGGCGTATAATCCTCACCGATTTGTATATCTTCTTGCACGTGCATTAAACCTGCATACTCACGTTACTTCCCACTATAGAAACTGGTGGACAGCAAACCATGGCAATTATCTTGAAGAAGGGATACAACATTTGTCACCTTTGGATGATTGCATCCTAGACATTGGAGAAATATTGAAATCTTTTGTGAGTCCAGATGAACGTCTCGGGGAGGCGCAAAAGACAATGTCCCTGGCTGCTTCTAAGGCTTCCCATTTTTGTGTTGTCGATGTAATTTCTAATGTTCGATGTCACTTTGTTTTGGCCATGTGGGAGACAATACATAAGAAAATCATGCAAAATCCTTTTGACAAAGTTCTTTACCTTGAAGATGAAACTCGCAAGATATTTAAGGCGATTTCTGACATTCATGGTGATAACCTTCATCCTCACAAAAAATTCGTTGATGAATATTTTCAAAAGCGACTAGAGAAAGCCAAGTTTAACTTAGAGAAGGTACTATATGATGAAAGCAGTACACTTGCCAAGAAGAATACACTTCTGGAGCGTGCTGCAGAGGCATTGCAGGAAGAAGAAGAATTGACAATCAAGCTAGAAGCTAGTGATGAACTTTTAAATCAACATAATCTAAAAGCTTCTAAAATGCGGGAAACTATAAGTAATGTTGAAAGTACTCCTGCTCTCAGTGACAAAGACACCAAAGCTGGTGTTGTTTCTTTCAAA

Coding sequence (CDS)

ATGACTTATTTAGCTGCTTTTCTTTCCTACTGGTTGTGCGTGTTTGTGTTTCCTGACAAACAAATTTTTATTCGTTCGGAGGTCTTTAAGGCAACTAATCTTATGGCTGTCTTGGCTAATATAATTTTGTGCTATATTTTTGGCCCTGTTCCTGTCTTGGCTAATATTTATAGTGGGCTGCGCCAGATTCACAATGCTTTTCCTTTTGCTGGTTATTCAAATGCATGCTTTCCCTTGCACTATATTCATGGATGGCTTGCCCTTTATTTCAATACACATTATAGAGTTCCAACAGATGTTAGGGGTTCACTAATAGTTGGATTTTCTAGCAAAGGTGGAGCCAAATACTATACTAACTTTCAAGCTCGTGTACATATTCACAAAGGGAAATATGTATCCTGGCATGCATGTCTTTTAAAAGACGACGAAAAGTTGACTTATTGGCTTTCTTCATTCTTCGTGAGCATTGGATCCTGCTTCTTATCCTCACGGTGTGGGTCTTCCATGGTCATTGAGGCGTATAATCCTCACCGATTTGTATATCTTCTTGCACGTGCATTAAACCTGCATACTCACGTTACTTCCCACTATAGAAACTGGTGGACAGCAAACCATGGCAATTATCTTGAAGAAGGGATACAACATTTGTCACCTTTGGATGATTGCATCCTAGACATTGGAGAAATATTGAAATCTTTTGTGAGTCCAGATGAACGTCTCGGGGAGGCGCAAAAGACAATGTCCCTGGCTGCTTCTAAGGCTTCCCATTTTTGTGTTGTCGATGTAATTTCTAATGTTCGATGTCACTTTGTTTTGGCCATGTGGGAGACAATACATAAGAAAATCATGCAAAATCCTTTTGACAAAGTTCTTTACCTTGAAGATGAAACTCGCAAGATATTTAAGGCGATTTCTGACATTCATGGTGATAACCTTCATCCTCACAAAAAATTCGTTGATGAATATTTTCAAAAGCGACTAGAGAAAGCCAAGTTTAACTTAGAGAAGGTACTATATGATGAAAGCAGTACACTTGCCAAGAAGAATACACTTCTGGAGCGTGCTGCAGAGGCATTGCAGGAAGAAGAAGAATTGACAATCAAGCTAGAAGCTAGTGATGAACTTTTAAATCAACATAATCTAAAAGCTTCTAAAATGCGGGAAACTATAAGTAATGTTGAAAGTACTCCTGCTCTCAGTGACAAAGACACCAAAGCTGGTGTTGTTTCTTTCAAA

Protein sequence

MTYLAAFLSYWLCVFVFPDKQIFIRSEVFKATNLMAVLANIILCYIFGPVPVLANIYSGLRQIHNAFPFAGYSNACFPLHYIHGWLALYFNTHYRVPTDVRGSLIVGFSSKGGAKYYTNFQARVHIHKGKYVSWHACLLKDDEKLTYWLSSFFVSIGSCFLSSRCGSSMVIEAYNPHRFVYLLARALNLHTHVTSHYRNWWTANHGNYLEEGIQHLSPLDDCILDIGEILKSFVSPDERLGEAQKTMSLAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKRLEKAKFNLEKVLYDESSTLAKKNTLLERAAEALQEEEELTIKLEASDELLNQHNLKASKMRETISNVESTPALSDKDTKAGVVSFK

Homology

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BLAST of ClCG02G008520 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 1.6e-70
Identity = 146/264 (55.30%), Postives = 167/264 (63.26%), Query Frame = 0


Query: 2   TYLAAFLSYWLCVFVFPDKQIFIRSEVFKATNLMAVLANIILCYIFGPVPVLANIYSGLR 61
           TYLAAFLS WLCVFVFPDKQ+ +R EVFK  +LMA      L      VPVLANIYSGLR
Sbjct: 307 TYLAAFLSCWLCVFVFPDKQLSLRPEVFKVASLMAEGYTFSLA-----VPVLANIYSGLR 366

Query: 62  QIHNAFPFAGYSNACFPLHYIHGWLALYFNTHYRVPTDVRGSLIVGFSSKGGAKYYTNFQ 121
           Q+H++    GYSNACFPLHY+HGWLALYFNTHY+ P  +RG  +V FS +GGAKYYTN +
Sbjct: 367 QVHDSTSSLGYSNACFPLHYVHGWLALYFNTHYKAPRSLRGPRMVEFSGEGGAKYYTNLE 426

Query: 122 ARVHIHKGKYVSWHAC--------LLKDDEKLTYWLSSFFVSIGSCFLSSRCGSSMVIEA 181
           AR HIHKGKYVSWHAC        LL DD +L  W +SFF+SI SCFLSS+CGSS VIE 
Sbjct: 427 ARTHIHKGKYVSWHACLPTKNKDELLTDDGELISWNASFFISIRSCFLSSQCGSSTVIEP 486

Query: 182 YNPHRF-----------------------------------------VYLLARALNLHTH 217
           Y+P RF                                         VYL   A N  TH
Sbjct: 487 YSPCRFSRQFGFYQDVPYDLGEEIPEANFFNVRYCWMICIRENTLSQVYLPVSAPNPDTH 546

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BLAST of ClCG02G008520 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 67.0 bits (162), Expect = 4.3e-07
Identity = 47/159 (29.56%), Postives = 79/159 (49.69%), Query Frame = 0


Query: 179 FVYLLARALNLHTHVTSHYRNWWTANHGNYLEEGIQHLSPLDDCIL----------DIGE 238
           F+Y +   L L   V +        +H  ++E+ ++ +  L+DC +           IG 
Sbjct: 706 FIYCIFSPLLLLFLVVNIILQSSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGA 765

Query: 239 ILKSFVSPDERLGEAQK---TMSLAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQN 298
            + S   P  + G  QK   T  +  S+ SHFC   +IS++R    + +WE + +KI++ 
Sbjct: 766 NIVSACPPVIK-GPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRT 825

Query: 299 PFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQ 325
           PF+++  LE E  KIF AI+    DNL   ++ V+ YFQ
Sbjct: 826 PFERLSSLEPEMHKIFDAIATSGSDNLIVLRELVNGYFQ 863

HSP 2 Score: 216.5 bits (550), Expect = 4.4e-52
Identity = 163/503 (32.41%), Postives = 227/503 (45.13%), Query Frame = 0


Query: 2   TYLAAFLSYWLCVFVFPDKQIFIRSEVFKATNLMAVLANIILCYIFGPVPVLANIYSGLR 61
           TYLAAFLS WLCVFVFPDKQI  R EVFK  +LMA      L      +PVLANIYSGL 
Sbjct: 204 TYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLA-----IPVLANIYSGLH 263

Query: 62  QIHNAFPFAGYSNACFPLHYIHGWLALYFNTHYRVPTDVRGSLIVGFSSKGGAKYYTNFQ 121
           QIH++    G+SN CFP+HY+HGWLALYFNTHY+  T +RG  +V FS +GGAKYYTN +
Sbjct: 264 QIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKASTSLRGPCMVEFSGEGGAKYYTNLE 323

Query: 122 ARVHIHKGKYVSWHACLLKDD----EKLTYWLSSFFVSIGSCFLSSRCGSSMVIEAYNPH 181
           AR+HIHKG     + C         + + Y LS     I    L++     M+    +  
Sbjct: 324 ARMHIHKG-----NPCRFGRQFGFYQDVPYDLSE---KIPKANLANVRYHWMICVRESTL 383

Query: 182 RFVYLLARALNLHTHVTSHYRNWWTANHGNYLEEGIQHL--------------------- 241
             VYL A  L+   H+TSHY+ WW A HG+YL+EG+Q+L                     
Sbjct: 384 SQVYLPAPTLHPCNHITSHYKAWWLAKHGDYLQEGLQNLIDRPTPSLIKSKTTKKIEHNP 443

Query: 242 ----------------------SPLDDCILDIGEIL----------KSFVSPDERLGEAQ 301
                                 S  D+   D+ ++            S  S D+R  +  
Sbjct: 444 DKKICFSKTKEPVDAQFKFAARSGADNMHKDLLKLTTDKRPSTHTEDSHSSNDDRHWKRP 503

Query: 302 K----------------------------------------------------------T 361
           K                                                          T
Sbjct: 504 KRPDKQSIDDEKPPIEVPDVPMASPEDLSASENSKTPIGATIMSTCPLVTKASPQRVGGT 563

Query: 362 MSLAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISD 371
             +  S+ SHFC  ++IS++R    + +WE++ +KI++ PF++V  LE E RKIF AI+ 
Sbjct: 564 EPITTSEISHFCADNLISDLRQKTAITLWESLRQKIIRTPFERVSSLEPEMRKIFAAIAT 623

[Close]

BLAST of ClCG02G008520 vs. NCBI nr
Match: KAA0060136.1 (uncharacterized protein E6C27_scaffold39G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 205.7 bits (522), Expect = 7.8e-49
Identity = 112/234 (47.86%), Postives = 140/234 (59.83%), Query Frame = 0


Query: 1   MTYLAAFLSYWLCVFVFPDKQIFIRSEVFKATNLMAVLANIILCYIFGPVPVLANIYSGL 60
           M +    +S W+   V        RSEVFK  +LMA      L      +P+LANIYSGL
Sbjct: 61  MDHFQIHVSEWISFLV-------TRSEVFKVASLMAEGDTFSLA-----IPILANIYSGL 120

Query: 61  RQIHNAFPFAGYSNACFPLHYIHGWLALYFNTHYRVPTDVRGSLIVGFSSKGGAKYYTNF 120
           RQIH+     G+SNACFP+HY+HGWLALYFNT+Y+ PT +RG  +V FS +GGAKYYTN 
Sbjct: 121 RQIHDCTSSLGHSNACFPIHYVHGWLALYFNTYYKAPTSLRGPRMVEFSGEGGAKYYTNL 180

Query: 121 QARVHIHKGKYVSWHAC--------LLKDDEKLTYWLSSFFVSIGSCFLSSRCGSSMVIE 180
           +AR HIH  KYVSWHAC        LL DD  L +W +SFF+SI  CFL S+ GSS VIE
Sbjct: 181 EARTHIHMEKYVSWHACLQAKNKDELLTDDGTLIHWNASFFISIRFCFLFSQYGSSTVIE 240

Query: 181 AYNPHRFVYLLARALNLHTHV----------TSHYRNWWTANHGNYLEEGIQHL 217
            Y+P RF     R    +  V           +    WW A HG+YL++G+Q+L
Sbjct: 241 PYSPCRF----GRQFGFYQDVPYDLGKKIPKANLANTWWLAKHGDYLQDGLQNL 278

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BLAST of ClCG02G008520 vs. NCBI nr
Match: KAA0042086.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 196.1 bits (497), Expect = 6.1e-46
Identity = 99/166 (59.64%), Postives = 117/166 (70.48%), Query Frame = 0


Query: 26  SEVFKATNLMAVLANIILC---YIFG-PVPVLANIYSGLRQIHNAFPFAGYSNACFPLHY 85
           +EVFK  +L A      L    Y F   VP+LANIYSGLRQIH++    G+SNACFPLHY
Sbjct: 108 TEVFKVASLKAEGYTFSLMAEGYTFSLVVPILANIYSGLRQIHDSTSSLGHSNACFPLHY 167

Query: 86  IHGWLALYFNTHYRVPTDVRGSLIVGFSSKGGAKYYTNFQARVHIHKGKYVSWHAC---- 145
           +HGWL LYFNTHY+ PT +RGS ++ F  +GGA YYTN  A  HI+KGKYVSWH C    
Sbjct: 168 VHGWLTLYFNTHYKAPTSLRGSRMIEFFGEGGANYYTNLVACPHIYKGKYVSWHVCLQTK 227

Query: 146 ----LLKDDEKLTYWLSSFFVSIGSCFLSSRCGSSMVIEAYNPHRF 180
               LLKDD  L YW +SFF+SI SCFLSS+CGSSMVIE+Y+P  F
Sbjct: 228 NKDELLKDDGNLIYWNASFFMSIRSCFLSSQCGSSMVIESYSPFCF 273

[Close]

BLAST of ClCG02G008520 vs. NCBI nr
Match: TYK18029.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 196.1 bits (497), Expect = 6.1e-46
Identity = 99/166 (59.64%), Postives = 117/166 (70.48%), Query Frame = 0


Query: 26  SEVFKATNLMAVLANIILC---YIFG-PVPVLANIYSGLRQIHNAFPFAGYSNACFPLHY 85
           +EVFK  +L A      L    Y F   VP+LANIYSGLRQIH++    G+SNACFPLHY
Sbjct: 108 TEVFKVASLKAEGYTFSLMAEGYTFSLVVPILANIYSGLRQIHDSTSSLGHSNACFPLHY 167

Query: 86  IHGWLALYFNTHYRVPTDVRGSLIVGFSSKGGAKYYTNFQARVHIHKGKYVSWHAC---- 145
           +HGWL LYFNTHY+ PT +RGS ++ F  +GGA YYTN  A  HI+KGKYVSWH C    
Sbjct: 168 VHGWLTLYFNTHYKAPTSLRGSRMIEFFGEGGANYYTNLVACPHIYKGKYVSWHVCLQTK 227

Query: 146 ----LLKDDEKLTYWLSSFFVSIGSCFLSSRCGSSMVIEAYNPHRF 180
               LLKDD  L YW +SFF+SI SCFLSS+CGSSMVIE+Y+P  F
Sbjct: 228 NKDELLKDDGNLIYWNASFFMSIRSCFLSSQCGSSMVIESYSPFCF 273

[Close]

BLAST of ClCG02G008520 vs. ExPASy TrEMBL
Match: A0A5A7U4C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00240 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.1e-52
Identity = 163/503 (32.41%), Postives = 227/503 (45.13%), Query Frame = 0


Query: 2   TYLAAFLSYWLCVFVFPDKQIFIRSEVFKATNLMAVLANIILCYIFGPVPVLANIYSGLR 61
           TYLAAFLS WLCVFVFPDKQI  R EVFK  +LMA      L      +PVLANIYSGL 
Sbjct: 204 TYLAAFLSCWLCVFVFPDKQISFRPEVFKVASLMAEGYTFSLA-----IPVLANIYSGLH 263

Query: 62  QIHNAFPFAGYSNACFPLHYIHGWLALYFNTHYRVPTDVRGSLIVGFSSKGGAKYYTNFQ 121
           QIH++    G+SN CFP+HY+HGWLALYFNTHY+  T +RG  +V FS +GGAKYYTN +
Sbjct: 264 QIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKASTSLRGPCMVEFSGEGGAKYYTNLE 323

Query: 122 ARVHIHKGKYVSWHACLLKDD----EKLTYWLSSFFVSIGSCFLSSRCGSSMVIEAYNPH 181
           AR+HIHKG     + C         + + Y LS     I    L++     M+    +  
Sbjct: 324 ARMHIHKG-----NPCRFGRQFGFYQDVPYDLSE---KIPKANLANVRYHWMICVRESTL 383

Query: 182 RFVYLLARALNLHTHVTSHYRNWWTANHGNYLEEGIQHL--------------------- 241
             VYL A  L+   H+TSHY+ WW A HG+YL+EG+Q+L                     
Sbjct: 384 SQVYLPAPTLHPCNHITSHYKAWWLAKHGDYLQEGLQNLIDRPTPSLIKSKTTKKIEHNP 443

Query: 242 ----------------------SPLDDCILDIGEIL----------KSFVSPDERLGEAQ 301
                                 S  D+   D+ ++            S  S D+R  +  
Sbjct: 444 DKKICFSKTKEPVDAQFKFAARSGADNMHKDLLKLTTDKRPSTHTEDSHSSNDDRHWKRP 503

Query: 302 K----------------------------------------------------------T 361
           K                                                          T
Sbjct: 504 KRPDKQSIDDEKPPIEVPDVPMASPEDLSASENSKTPIGATIMSTCPLVTKASPQRVGGT 563

Query: 362 MSLAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISD 371
             +  S+ SHFC  ++IS++R    + +WE++ +KI++ PF++V  LE E RKIF AI+ 
Sbjct: 564 EPITTSEISHFCADNLISDLRQKTAITLWESLRQKIIRTPFERVSSLEPEMRKIFAAIAT 623

[Close]

BLAST of ClCG02G008520 vs. ExPASy TrEMBL
Match: A0A5A7V0Y4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00570 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.8e-49
Identity = 112/234 (47.86%), Postives = 140/234 (59.83%), Query Frame = 0


Query: 1   MTYLAAFLSYWLCVFVFPDKQIFIRSEVFKATNLMAVLANIILCYIFGPVPVLANIYSGL 60
           M +    +S W+   V        RSEVFK  +LMA      L      +P+LANIYSGL
Sbjct: 61  MDHFQIHVSEWISFLV-------TRSEVFKVASLMAEGDTFSLA-----IPILANIYSGL 120

Query: 61  RQIHNAFPFAGYSNACFPLHYIHGWLALYFNTHYRVPTDVRGSLIVGFSSKGGAKYYTNF 120
           RQIH+     G+SNACFP+HY+HGWLALYFNT+Y+ PT +RG  +V FS +GGAKYYTN 
Sbjct: 121 RQIHDCTSSLGHSNACFPIHYVHGWLALYFNTYYKAPTSLRGPRMVEFSGEGGAKYYTNL 180

Query: 121 QARVHIHKGKYVSWHAC--------LLKDDEKLTYWLSSFFVSIGSCFLSSRCGSSMVIE 180
           +AR HIH  KYVSWHAC        LL DD  L +W +SFF+SI  CFL S+ GSS VIE
Sbjct: 181 EARTHIHMEKYVSWHACLQAKNKDELLTDDGTLIHWNASFFISIRFCFLFSQYGSSTVIE 240

Query: 181 AYNPHRFVYLLARALNLHTHV----------TSHYRNWWTANHGNYLEEGIQHL 217
            Y+P RF     R    +  V           +    WW A HG+YL++G+Q+L
Sbjct: 241 PYSPCRF----GRQFGFYQDVPYDLGKKIPKANLANTWWLAKHGDYLQDGLQNL 278

[Close]

BLAST of ClCG02G008520 vs. ExPASy TrEMBL
Match: A0A5D3D3U4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003480 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.0e-46
Identity = 99/166 (59.64%), Postives = 117/166 (70.48%), Query Frame = 0


Query: 26  SEVFKATNLMAVLANIILC---YIFG-PVPVLANIYSGLRQIHNAFPFAGYSNACFPLHY 85
           +EVFK  +L A      L    Y F   VP+LANIYSGLRQIH++    G+SNACFPLHY
Sbjct: 108 TEVFKVASLKAEGYTFSLMAEGYTFSLVVPILANIYSGLRQIHDSTSSLGHSNACFPLHY 167

Query: 86  IHGWLALYFNTHYRVPTDVRGSLIVGFSSKGGAKYYTNFQARVHIHKGKYVSWHAC---- 145
           +HGWL LYFNTHY+ PT +RGS ++ F  +GGA YYTN  A  HI+KGKYVSWH C    
Sbjct: 168 VHGWLTLYFNTHYKAPTSLRGSRMIEFFGEGGANYYTNLVACPHIYKGKYVSWHVCLQTK 227

Query: 146 ----LLKDDEKLTYWLSSFFVSIGSCFLSSRCGSSMVIEAYNPHRF 180
               LLKDD  L YW +SFF+SI SCFLSS+CGSSMVIE+Y+P  F
Sbjct: 228 NKDELLKDDGNLIYWNASFFMSIRSCFLSSQCGSSMVIESYSPFCF 273

[Close]

BLAST of ClCG02G008520 vs. ExPASy TrEMBL
Match: A0A5A7TJC9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G005550 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.0e-46
Identity = 99/166 (59.64%), Postives = 117/166 (70.48%), Query Frame = 0


Query: 26  SEVFKATNLMAVLANIILC---YIFG-PVPVLANIYSGLRQIHNAFPFAGYSNACFPLHY 85
           +EVFK  +L A      L    Y F   VP+LANIYSGLRQIH++    G+SNACFPLHY
Sbjct: 108 TEVFKVASLKAEGYTFSLMAEGYTFSLVVPILANIYSGLRQIHDSTSSLGHSNACFPLHY 167

Query: 86  IHGWLALYFNTHYRVPTDVRGSLIVGFSSKGGAKYYTNFQARVHIHKGKYVSWHAC---- 145
           +HGWL LYFNTHY+ PT +RGS ++ F  +GGA YYTN  A  HI+KGKYVSWH C    
Sbjct: 168 VHGWLTLYFNTHYKAPTSLRGSRMIEFFGEGGANYYTNLVACPHIYKGKYVSWHVCLQTK 227

Query: 146 ----LLKDDEKLTYWLSSFFVSIGSCFLSSRCGSSMVIEAYNPHRF 180
               LLKDD  L YW +SFF+SI SCFLSS+CGSSMVIE+Y+P  F
Sbjct: 228 NKDELLKDDGNLIYWNASFFMSIRSCFLSSQCGSSMVIESYSPFCF 273

[Close]

BLAST of ClCG02G008520 vs. ExPASy TrEMBL
Match: A0A5D3C9B7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00670 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-45
Identity = 100/205 (48.78%), Postives = 119/205 (58.05%), Query Frame = 0


Query: 50  VPVLANIYSGLRQIHNAFPFAGYSNACFPLHYIHGWLALYFNTHYRVPTDVRGSLIVGFS 109
           +PVLANIYSGLRQIH+     G+SNACFP+HY+HGWLALYFNT+Y+ PT +RG  +V FS
Sbjct: 181 IPVLANIYSGLRQIHDCTSSLGHSNACFPIHYVHGWLALYFNTYYKAPTSLRGPRMVEFS 240

Query: 110 SKGGAKYYTNFQARVHIHKGKYVSWHAC--------LLKDDEKLTYWLSSFFVSIGSCFL 169
            +GGAKYYTN +AR HIHK KYVSWHAC        LL DD  L +W +SFF+SI  CFL
Sbjct: 241 GEGGAKYYTNLEARTHIHKEKYVSWHACLQAKNKDELLTDDGTLIHWNASFFISIRFCFL 300

Query: 170 SSRCGSSMVIEAYNPHRF-----------------------------------------V 206
            S+ GSS VIE Y+P RF                                         V
Sbjct: 301 FSQYGSSTVIEPYSPCRFGRQFGFYQDVPYDLGKKIPKANLANVRYHWMICVRESTLSQV 360

The following BLAST results are available for this feature:

BLAST of ClCG02G008520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745312.1	1.6e-70	55.30	uncharacterized protein LOC116405439 [Cucumis sativus]	[more]
XP_031745312.1	4.3e-07	29.56	uncharacterized protein LOC116405439 [Cucumis sativus]	[more]
KAA0060136.1	7.8e-49	47.86	uncharacterized protein E6C27_scaffold39G00570 [Cucumis melo var. makuwa]	[more]
KAA0042086.1	6.1e-46	59.64	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK18029.1	6.1e-46	59.64	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of ClCG02G008520 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG02G008520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4C3	2.1e-52	32.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V0Y4	3.8e-49	47.86	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D3U4	3.0e-46	59.64	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A5A7TJC9	3.0e-46	59.64	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67...	[more]
A0A5D3C9B7	1.5e-45	48.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of ClCG02G008520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 342..372
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 2..377
None	No IPR available	PANTHER	PTHR36607:SF20	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 2..377

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G008520.1	ClCG02G008520.1	mRNA