ClCG02G007240 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G007240
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Pathogenesis related protein-1
Location	CG_Chr02: 8393294 .. 8393782 (-)
RNA-Seq Expression	ClCG02G007240
Synteny	ClCG02G007240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAAAATGGCACTCGCCAACGTTCTCTCCACCATTTGCATGTTTGCGCTAACCCTAACCCCCATCGTCATTGCTCAAAACACCCCTGACGACTTCGTCAACGAGCACAATGCAGTTCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGATGAAGAACTTGCAACTTATGCTAAAAATTACATCACGTCGAAGATTAAAACATGCGAGATGGTGCACTCCAATGGCCCTTACGGAGAGAACTTGGCCACAGTAAACGGCGAGTTGACCGCAGCAGCTGCCGTGAAGGCATGGGCGGATGAAAAGAAGTTTTATGACCACAATTCCAACAAATGTGTGGGGGGCGAGTGTCGACATTATACACAATTGGTGTGGAAGAAAAGTTTCTTGGTGGGTTGTGCTACTGTTAAATGCAAAAACAATTGGTCTTTACTCTCATGCAACTATAGTCCTTCTGGTAATGTTGTAGGTGAGCTACCTTATTAG

mRNA sequence

ATGTCGAAAATGGCACTCGCCAACGTTCTCTCCACCATTTGCATGTTTGCGCTAACCCTAACCCCCATCGTCATTGCTCAAAACACCCCTGACGACTTCGTCAACGAGCACAATGCAGTTCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGATGAAGAACTTGCAACTTATGCTAAAAATTACATCACGTCGAAGATTAAAACATGCGAGATGGTGCACTCCAATGGCCCTTACGGAGAGAACTTGGCCACAGTAAACGGCGAGTTGACCGCAGCAGCTGCCGTGAAGGCATGGGCGGATGAAAAGAAGTTTTATGACCACAATTCCAACAAATGTGTGGGGGGCGAGTGTCGACATTATACACAATTGGTGTGGAAGAAAAGTTTCTTGGTGGGTTGTGCTACTGTTAAATGCAAAAACAATTGGTCTTTACTCTCATGCAACTATAGTCCTTCTGGTAATGTTGTAGGTGAGCTACCTTATTAG

Coding sequence (CDS)

ATGTCGAAAATGGCACTCGCCAACGTTCTCTCCACCATTTGCATGTTTGCGCTAACCCTAACCCCCATCGTCATTGCTCAAAACACCCCTGACGACTTCGTCAACGAGCACAATGCAGTTCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGATGAAGAACTTGCAACTTATGCTAAAAATTACATCACGTCGAAGATTAAAACATGCGAGATGGTGCACTCCAATGGCCCTTACGGAGAGAACTTGGCCACAGTAAACGGCGAGTTGACCGCAGCAGCTGCCGTGAAGGCATGGGCGGATGAAAAGAAGTTTTATGACCACAATTCCAACAAATGTGTGGGGGGCGAGTGTCGACATTATACACAATTGGTGTGGAAGAAAAGTTTCTTGGTGGGTTGTGCTACTGTTAAATGCAAAAACAATTGGTCTTTACTCTCATGCAACTATAGTCCTTCTGGTAATGTTGTAGGTGAGCTACCTTATTAG

Protein sequence

MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY

Homology

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BLAST of ClCG02G007240 vs. NCBI nr
Match: XP_008455067.1 (PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo] >KAA0031387.1 pathogenesis-related protein 1A-like [Cucumis melo var. makuwa] >TYK06839.1 pathogenesis-related protein 1A-like [Cucumis melo var. makuwa])

HSP 1 Score: 280.0 bits (715), Expect = 1.3e-71
Identity = 122/162 (75.31%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           MSKMAL+N+ S+IC+  LTL P+++A NTP ++V+ HNAVRA+VG +P+FWDEELA YA+
Sbjct: 26  MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 85

Query: 61  NYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRH 120
           NY+ SK+ TCEMVHSNGPYGENLAT++G LTAAAAV+AWADEKK+YDHNSN CVGGECRH
Sbjct: 86  NYLESKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 145

Query: 121 YTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           YTQLVWK SFL+GCA +KCKNNWSL+SCNYSP+GNV GELPY
Sbjct: 146 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 187

[Close]

BLAST of ClCG02G007240 vs. NCBI nr
Match: XP_004137082.3 (basic form of pathogenesis-related protein 1 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 3.7e-71
Identity = 126/163 (77.30%), Postives = 147/163 (90.18%), Query Frame = 0


Query: 1   MSKMALANVLSTICMFALTLT-PIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYA 60
           MS MAL+N  S+IC+  LTLT P+++A NTP ++V+ HNAVRA+VGA+P+FWDEELA YA
Sbjct: 25  MSNMALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYA 84

Query: 61  KNYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECR 120
           +NY+ SKI TCEMVHSNG YGENLAT++G LTAAAAVKAWADEKK+YDHNSNKCVGGECR
Sbjct: 85  QNYLDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECR 144

Query: 121 HYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           HYTQLVWK SFL+GCA +KCKNNWSL+SCNYSP+GNVVGELPY
Sbjct: 145 HYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVVGELPY 187

[Close]

BLAST of ClCG02G007240 vs. NCBI nr
Match: XP_004137081.1 (basic form of pathogenesis-related protein 1 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 2.4e-70
Identity = 129/159 (81.13%), Postives = 137/159 (86.16%), Query Frame = 0


Query: 4   MALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYI 63
           MALA  LS +C+ AL LTPIVIAQN+P DF + HNAVRAKVGAEPLFWDEEL  YAKNYI
Sbjct: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60

Query: 64  TSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQ 123
           TSKIKTCEMVH  GPYGENLAT N  LTAAA+V  WA EKK+Y+HNSNKC GGECRHY Q
Sbjct: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQ 120

Query: 124 LVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           LVWK SFLVGCATVKCKNNWSL+SCNYSPSGNVVGE PY
Sbjct: 121 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 159

[Close]

BLAST of ClCG02G007240 vs. NCBI nr
Match: XP_038886847.1 (pathogenesis-related protein 1A-like [Benincasa hispida])

HSP 1 Score: 273.5 bits (698), Expect = 1.2e-69
Identity = 121/162 (74.69%), Postives = 144/162 (88.89%), Query Frame = 0


Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           MSKM+L+N+LS+IC+  LT  P+ +A NTP  +V+ HNAVRA+VGA+P+FWDEELATYA 
Sbjct: 1   MSKMSLSNILSSICLIMLTFIPMFLAHNTPQHYVDAHNAVRAEVGADPVFWDEELATYAN 60

Query: 61  NYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRH 120
           NY+ +KI TCEMVHS GPYGENLAT++G LTAAAAV+AWADEKK+YDH SN CVGGECRH
Sbjct: 61  NYLETKIATCEMVHSKGPYGENLATLDGLLTAAAAVQAWADEKKYYDHKSNTCVGGECRH 120

Query: 121 YTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           YTQLVWKKSFL+GCA VKCKN+W+L+SCNYSP+GNV GELPY
Sbjct: 121 YTQLVWKKSFLIGCANVKCKNHWTLVSCNYSPAGNVPGELPY 162

[Close]

BLAST of ClCG02G007240 vs. NCBI nr
Match: KAE8645836.1 (hypothetical protein Csa_017290 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 2.3e-65
Identity = 116/155 (74.84%), Postives = 139/155 (89.68%), Query Frame = 0


Query: 4   MALANVLSTICMFALTLT-PIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNY 63
           MAL+N  S+IC+  LTLT P+++A NTP ++V+ HNAVRA+VGA+P+FWDEELA YA+NY
Sbjct: 1   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 60

Query: 64  ITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYT 123
           + SKI TCEMVHSNG YGENLAT++G LTAAAAVKAWADEKK+YDHNSNKCVGGECRHYT
Sbjct: 61  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 120

Query: 124 QLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVV 158
           QLVWK SFL+GCA +KCKNNWSL+SCNYSP+G+ +
Sbjct: 121 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGSAL 155

[Close]

BLAST of ClCG02G007240 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.5e-46
Identity = 76/137 (55.47%), Postives = 97/137 (70.80%), Query Frame = 0


Query: 26  AQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIKTCEMVHSNGPYGENLAT 85
           AQN+P D++N HNA R +VG  P+ WD  LA YA+NY   +I  C M+HS+GPYGENLA 
Sbjct: 23  AQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPYGENLAA 82

Query: 86  VNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQLVWKKSFLVGCATVKCKNNWSL 145
              +L AA AVK W DEK+FYD+NSN CVGG C HYTQ+VW+ S  +GCA V+  N W  
Sbjct: 83  AFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRLGCARVRSNNGWFF 142

Query: 146 LSCNYSPSGNVVGELPY 163
           ++CNY P GN +G+ P+
Sbjct: 143 ITCNYDPPGNFIGQRPF 159

[Close]

BLAST of ClCG02G007240 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.9e-42
Identity = 81/163 (49.69%), Postives = 112/163 (68.71%), Query Frame = 0


Query: 2   SKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKN 61
           S+M    ++ST+ +F L ++    AQN+  D+++ HN  RA VG EPL WD  +A YA+N
Sbjct: 7   SQMPSFFLVSTLLLF-LIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQN 66

Query: 62  YITSKIKTCEMVHSNGPYGENLATVNGE-LTAAAAVKAWADEKKFYDHNSNKCVGGE-CR 121
           Y++     C +VHS+G YGENLA  +G+ +TAA AV+ W DEK++YDH+SN C  G+ C 
Sbjct: 67  YVSQLAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCG 126

Query: 122 HYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           HYTQ+VW+ S  VGCA VKC N   ++SCNY P GNV+G+ PY
Sbjct: 127 HYTQVVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of ClCG02G007240 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 5.4e-41
Identity = 78/156 (50.00%), Postives = 108/156 (69.23%), Query Frame = 0


Query: 9   VLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIK 68
           ++ST+ +F L ++    AQN+  D+++ HN  RA VG EPL WD+++A YA+NY +    
Sbjct: 14  LVSTLLLF-LVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAA 73

Query: 69  TCEMVHSNGPYGENLATVNGE-LTAAAAVKAWADEKKFYDHNSNKCVGGE-CRHYTQLVW 128
            C +VHS+G YGENLA  +G+ +TAA AV+ W DEK++YDH+SN C  G+ C HYTQ+VW
Sbjct: 74  DCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 133

Query: 129 KKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           + S  VGCA V+C N   ++SCNY P GN  GE PY
Sbjct: 134 RNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of ClCG02G007240 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3)

HSP 1 Score: 167.9 bits (424), Expect = 9.2e-41
Identity = 79/163 (48.47%), Postives = 113/163 (69.33%), Query Frame = 0


Query: 2   SKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKN 61
           S+M+   ++ST+ +F L ++    AQN+  D+++ HN  RA VG EPL WD+++A YA+N
Sbjct: 7   SQMSSFFLVSTLLLF-LIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQN 66

Query: 62  YITSKIKTCEMVHSNGPYGENLATVNGE-LTAAAAVKAWADEKKFYDHNSNKCVGGE-CR 121
           Y +     C +VHS+G YGENLA  +G+ LTAA AV+ W +EK++Y H+SN C  G+ C 
Sbjct: 67  YASQLAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCG 126

Query: 122 HYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           HYTQ+VW+ S  VGCA V+C N   ++SCNY P GNV+G+ PY
Sbjct: 127 HYTQVVWRNSVRVGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

[Close]

BLAST of ClCG02G007240 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-39
Identity = 69/133 (51.88%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 26  AQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIKTCEMVHSNGPYGENLAT 85
           AQ   ++F+N HNA R +VG  P+ WD+ LA YA+NY   +   C M+HS+GPYGENLA 
Sbjct: 21  AQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAA 80

Query: 86  VNGELTAAAAVKAWADEKKFYDHNSNKCVGGE-CRHYTQLVWKKSFLVGCATVKCKNNWS 145
              +L AA AVK W DEK++YD+NSN C  G+ C HYTQ+VW+KS  +GCA V+C + W 
Sbjct: 81  AFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRLGCARVRCNSGWV 140

Query: 146 LLSCNYSPSGNVV 158
            ++CNY P GN +
Sbjct: 141 FITCNYDPPGNYI 153

[Close]

BLAST of ClCG02G007240 vs. ExPASy TrEMBL
Match: A0A5D3C911 (Pathogenesis-related protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001430 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.2e-72
Identity = 122/162 (75.31%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           MSKMAL+N+ S+IC+  LTL P+++A NTP ++V+ HNAVRA+VG +P+FWDEELA YA+
Sbjct: 26  MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 85

Query: 61  NYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRH 120
           NY+ SK+ TCEMVHSNGPYGENLAT++G LTAAAAV+AWADEKK+YDHNSN CVGGECRH
Sbjct: 86  NYLESKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 145

Query: 121 YTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           YTQLVWK SFL+GCA +KCKNNWSL+SCNYSP+GNV GELPY
Sbjct: 146 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 187

[Close]

BLAST of ClCG02G007240 vs. ExPASy TrEMBL
Match: A0A1S3C055 (pathogenesis-related protein 1A-like OS=Cucumis melo OX=3656 GN=LOC103495332 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.2e-72
Identity = 122/162 (75.31%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           MSKMAL+N+ S+IC+  LTL P+++A NTP ++V+ HNAVRA+VG +P+FWDEELA YA+
Sbjct: 26  MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 85

Query: 61  NYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRH 120
           NY+ SK+ TCEMVHSNGPYGENLAT++G LTAAAAV+AWADEKK+YDHNSN CVGGECRH
Sbjct: 86  NYLESKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 145

Query: 121 YTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           YTQLVWK SFL+GCA +KCKNNWSL+SCNYSP+GNV GELPY
Sbjct: 146 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 187

[Close]

BLAST of ClCG02G007240 vs. ExPASy TrEMBL
Match: A0A0A0K4C6 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070250 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.8e-71
Identity = 126/163 (77.30%), Postives = 147/163 (90.18%), Query Frame = 0


Query: 1   MSKMALANVLSTICMFALTLT-PIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYA 60
           MS MAL+N  S+IC+  LTLT P+++A NTP ++V+ HNAVRA+VGA+P+FWDEELA YA
Sbjct: 1   MSNMALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYA 60

Query: 61  KNYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECR 120
           +NY+ SKI TCEMVHSNG YGENLAT++G LTAAAAVKAWADEKK+YDHNSNKCVGGECR
Sbjct: 61  QNYLDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECR 120

Query: 121 HYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           HYTQLVWK SFL+GCA +KCKNNWSL+SCNYSP+GNVVGELPY
Sbjct: 121 HYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVVGELPY 163

[Close]

BLAST of ClCG02G007240 vs. ExPASy TrEMBL
Match: A0A6J1D6J4 (basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673 GN=LOC111017385 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.4e-61
Identity = 115/162 (70.99%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           MSKMA    L TI +  LTL+ I  AQNTPDDF+  H   R +VGA  +FWD+E+A YAK
Sbjct: 1   MSKMA---SLFTIFLIGLTLSSIARAQNTPDDFLKAHKKFRDEVGASEMFWDDEVAAYAK 60

Query: 61  NYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRH 120
            Y  SKI TCEMVHS+  YGENLATVNG+LTA  AV+AWADEKK YD+N+NKCVGGECRH
Sbjct: 61  RYAESKIDTCEMVHSDTHYGENLATVNGDLTAEMAVQAWADEKKXYDYNANKCVGGECRH 120

Query: 121 YTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           YTQLVWK SFL+GCATVKCKNNW+L+SCNYSP+GNVVGE PY
Sbjct: 121 YTQLVWKDSFLLGCATVKCKNNWTLISCNYSPTGNVVGEKPY 159

[Close]

BLAST of ClCG02G007240 vs. ExPASy TrEMBL
Match: A0A6J1IBS1 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471055 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 107/163 (65.64%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           MSKM LA +L   C+ AL+L+ +V+ Q   +DFV  HNAVR K G  P+FWDEEL  +AK
Sbjct: 1   MSKMTLAAML---CLVALSLSLVVVGQEPGEDFVKAHNAVREKKGERPMFWDEELEEHAK 60

Query: 61  NYITSKIKTCEMVHS-NGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECR 120
            Y+ +K++TCEMVHS + PYGENLAT NG+LTA  AV AWA E+KFYDH +NKCVGGECR
Sbjct: 61  AYLQTKVETCEMVHSTDSPYGENLATSNGDLTAEGAVAAWAAEEKFYDHKTNKCVGGECR 120

Query: 121 HYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           HY QLVW  +FLVGCATVKC+NNW+L+ CNYSP+GNVVGE PY
Sbjct: 121 HYVQLVWNATFLVGCATVKCRNNWTLIGCNYSPAGNVVGEDPY 160

[Close]

BLAST of ClCG02G007240 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-40
Identity = 76/160 (47.50%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 8   NVLSTICMFALTLTPIVI---AQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYIT 67
           N   T  +  + ++ +V+   AQNTP D++N HN  RA+VG   + WD  LA YA NY  
Sbjct: 2   NTFKTPFLVIVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSN 61

Query: 68  SKIKTCEMVHSNGPYGENLAT-VNGELTAAAAVKAWADEKKFYDHNSNKCVGG-ECRHYT 127
            +   C +VHSNGPYGENLA   +   +A +AVK W DEK +Y +  N C GG +C HYT
Sbjct: 62  FRKADCNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYT 121

Query: 128 QLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           Q+VW+ S  +GCA V+C N W  +SCNY+  GN VGE PY
Sbjct: 122 QVVWRDSVKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of ClCG02G007240 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 6.8e-39
Identity = 72/148 (48.65%), Postives = 96/148 (64.86%), Query Frame = 0


Query: 16  FALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIKTCEMVHS 75
           F L L   + AQ++P DF+  HN  RA+VG  PL WDE++A YA+NY   +   C M HS
Sbjct: 16  FFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHS 75

Query: 76  NGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCV-GGECRHYTQLVWKKSFLVGC 135
           +G YGEN+A  +G +T  AAV  W DE+  YD++SN C    +C HYTQ+VW+ S  +GC
Sbjct: 76  SGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGC 135

Query: 136 ATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           A V+C N  + ++CNY P GN VGE PY
Sbjct: 136 AKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of ClCG02G007240 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.5e-38
Identity = 68/160 (42.50%), Postives = 103/160 (64.38%), Query Frame = 0


Query: 8   NVLSTICMFALTLTPIV--IAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITS 67
           ++L T  +F L +      +A++    F+  HN  R +VG +PL WD+E+A YA +Y   
Sbjct: 2   SLLKTNILFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQ 61

Query: 68  KIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKC---VGGECRHYT 127
           +I  C +VHSNGP+GEN+A  +GE++A  A + W +EK++YD++SN C    GG C HYT
Sbjct: 62  RINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYT 121

Query: 128 QLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           Q+VWK +  +GCA V C +  + ++CNY P GN +GE P+
Sbjct: 122 QVVWKNTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of ClCG02G007240 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 154.5 bits (389), Expect = 7.5e-38
Identity = 65/137 (47.45%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 26  AQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIKTCEMVHSNGPYGENLAT 85
           AQ++P D++  HN  R  VG  P+ WDE +A YA++Y       C ++HS GPYGENLA 
Sbjct: 26  AQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENLAW 85

Query: 86  VNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQLVWKKSFLVGCATVKCKNNWSL 145
            +G+L+  +AV  W  EK  Y++ +N C  G C HYTQ+VW+KS  +GCA V+C N  ++
Sbjct: 86  GSGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRKSVRLGCAKVRCNNGGTI 145

Query: 146 LSCNYSPSGNVVGELPY 163
           +SCNY P GN V E PY
Sbjct: 146 ISCNYDPRGNYVNEKPY 161

[Close]

BLAST of ClCG02G007240 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37
Identity = 69/162 (42.59%), Postives = 98/162 (60.49%), Query Frame = 0


Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           M   + + +L  +      L   + AQ++  D+VN HN  R+++G  P+ WDE LA YA+
Sbjct: 1   MKVTSYSRILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYAR 60

Query: 61  NYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRH 120
           NY       C +VHS GPYGENLA   G+L+  AAV  W +EK  Y++++N C  G C H
Sbjct: 61  NYANQLKGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGH 120

Query: 121 YTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           YTQ+VW+ S  +GCA V+C N  +++SCNY P GN   + PY
Sbjct: 121 YTQVVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

The following BLAST results are available for this feature:

BLAST of ClCG02G007240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455067.1	1.3e-71	75.31	PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo] >KAA0031387.1 pat...	[more]
XP_004137082.3	3.7e-71	77.30	basic form of pathogenesis-related protein 1 [Cucumis sativus]	[more]
XP_004137081.1	2.4e-70	81.13	basic form of pathogenesis-related protein 1 [Cucumis sativus]	[more]
XP_038886847.1	1.2e-69	74.69	pathogenesis-related protein 1A-like [Benincasa hispida]	[more]
KAE8645836.1	2.3e-65	74.84	hypothetical protein Csa_017290 [Cucumis sativus]	[more]

BLAST of ClCG02G007240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	2.5e-46	55.47	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P07053	4.9e-42	49.69	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P08299	5.4e-41	50.00	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
P09042	9.2e-41	48.47	Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3	[more]
Q08697	1.3e-39	51.88	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]

BLAST of ClCG02G007240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C911	6.2e-72	75.31	Pathogenesis-related protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C055	6.2e-72	75.31	pathogenesis-related protein 1A-like OS=Cucumis melo OX=3656 GN=LOC103495332 PE=...	[more]
A0A0A0K4C6	1.8e-71	77.30	SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070250 PE=4 SV...	[more]
A0A6J1D6J4	6.4e-61	70.99	basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673...	[more]
A0A6J1IBS1	1.9e-57	65.64	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of ClCG02G007240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50060.1	2.8e-40	47.50	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G33720.1	6.8e-39	48.65	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT3G19690.1	1.5e-38	42.50	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	7.5e-38	47.45	pathogenesis-related gene 1	[more]
AT2G14580.1	1.3e-37	42.59	basic pathogenesis-related protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 49..67 score: 31.19 coord: 145..158 score: 48.87 coord: 118..134 score: 54.06 coord: 95..108 score: 40.6
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 21..162
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 28..158 e-value: 2.8E-50 score: 183.0
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 35..150 e-value: 1.5E-19 score: 71.0
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 28..162 e-value: 1.3E-41 score: 144.1
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 20..162
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 21..162
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 30..162 e-value: 3.31012E-61 score: 183.604
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 145..156
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 119..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G007240.1	ClCG02G007240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0005576	extracellular region