ClCG02G006680 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAAAGTTGTTTGGCTTTGGATTTTCCTATAAATTTTGGCTGATTTTCTTTCTCAGAAAGTGGTGGTGTGTTTGATTATATGGCAAGAACTTGTATGGCTATGCAGGCAAATGCATTGTTTCTTAGGTAAAATAATCTTGGCTCTTTTGAGTGATTTGATTTTGTCATTTTCTTTGAGTGGAATGGTATGTGGGGTCTAAACGTTCTAACTTTTTGATTTCGACTATGAGTATATATCTAAATTAGTTGAACTATGTTCAAATTATTGGTAAAAGTATCATACTTATGTTTATATATTATATTGGTTAAAATACTATTTTGGTTCTTACACTGGAAGATTTGTTTAATTTTTAGTCTCTGTATTTTTAATAAATCTTAAATTTAGTCTCTCAAAGTTTTGTTTTTTTTTTTTTTTTGTCAAAATTTGTTAAATAATAATAAGAATTTTTAGGCAAGAAAATTAGTGAAATTTCTAATTTGGATAATAAAGTTTTTAAAAAATCAACAATAAACAAACATAATAACTAAATTTAAGATTTATTAAAAGTAAAAGGGCTAAAATGGAAAATGTGAAAGTAACTAGATTAAAATTGAACAAGGTTTAATATACTTTTGATTTTGGTTCATTTTGGTTCATGTACTTTCAAAATGTTCATTTTGATCCTTATACTTTCAACTTTAGTTCATTTTTGTCCTTATACTTTCAAAATGTTTATTTTGGTCTTTGTACTTTCAACTTTTGTTCATTTTGGTTCTTGAACTTTCAAAAAGTAATTATTTTGATCCCTTAAAAATGAAATAAAAATCAAAATGAAAGGATAAAAATAGTTACTTTTAAAAAGTATAAGGACCAAATTGAACCAAAATTAAGTATAGAGACCAAAATGAACAAAATTGAAAATATAGAGACCACAATGAATAAAATTGAAAATATAGAGACCAAAATGAATATTTTAAAAAAACATAAACCAAAATAAATCGAAATTAGAAATATAGGAATATTTACACAATTAAACAAACAACCTCCAATTGCCTATTATATTCTAGTTTTTTTTTTTTTTTTTTTTTTAATTGGCTCAGAAGAAAGTCTATAAATGAAAGTGTTTGTGGAATTTAGAAGTCTATATGAGTAGAAGAAAGTGATTGTGGAAAAGAAAAAGGTACTCTATGAGAAAGTGGATGGAAAAAGAAAGTTGCACCTTTATTTTTATTTTTTATTTTTTATTTTTTTCCCTTCTTGCTGTTTCTTTTTTAAACATAGTTTATCATTTCATTTCACCATGATTAAGCTAGCTATGTTGATGGTGCTTTTGGGGATTACTAAAAGGGAACTTTTGTTAGGATAAAAACCTAGTTTCCATTCAAATTTGATTTTAAAAGTTGAAAACACTTTAACTTTAAAGTGTTTTATGGAAAAGTATTGTGTGGTAACTGTGGTTTTAGTTTCAAGTGCTTCACAAAATTGTATAACCATTGATAAATGTAAATTCTTTTATTTAGTACTTTTTATGAAAGTACTTTGGCTAAATTGCTTATTTTAAAAAAATGATTAAACACCCTATTACATATATAATTTCAAATACCCATTTATTCTACATATTTGAATAAATAAACCAATTAACAAAAGATATTTGAAACTCCTAATTAGTTATATGACAGGAAAATGAAACAATTGAAGCGACAATTCAGCAGTGTTGTAATTGAGTCCACAAGCCAACAAGCCCCACATCAAAAAAATGATGAAACAGAAACAGAGCCACAACCCTACAACTCATCCAATTGGGTTCCCCACCCTCGTACTGGAATCTATTTTCCTCAGGGCCATGAGTGGGTCATGAAGGATGTCCCTGAAAATGCCGCTTCCTTCTCTCGACTTTGTTGGTTTCGGGATTCTGATGACATCGACAACTTGAACCCCGACAACGATATCTCTCTGAGGCCTCGATTCGCCATTGTTTTCGGCCGCCATGATTGAGGCTTGGTGAAGAAGGCTAAACTATATGTTAAAAGACTTGAGAGTTGAGCTTTGTTGATAAAAGAGGAGTTTGAACTTTGGAGTTGGAGTAAAGTTGGCCAATTACCCAAATTGGCCTTGGAATAATGTAAAGTCTAATAGATGTACATAAATAAAACATAATAAAGTGAAAAAAATAGTAATTCAAAAATTAAATATGTATAAATGCTTTGGTTCTACCAAAGATATTAAAATTTATACTTATCTATAGCTTTGAAATAGTTGTTTTATATTTCAATGATAATTGACATGG ACAAAGTTGTTTGGCTTTGGATTTTCCTATAAATTTTGGCTGATTTTCTTTCTCAGAAAGTGGTGGTGTGTTTGATTATATGGCAAGAACTTGTATGGCTATGCAGGCAAATGCATTGTTTCTTAGGAAAATGAAACAATTGAAGCGACAATTCAGCAGTGTTGTAATTGAGTCCACAAGCCAACAAGCCCCACATCAAAAAAATGATGAAACAGAAACAGAGCCACAACCCTACAACTCATCCAATTGGGTTCCCCACCCTCGTACTGGAATCTATTTTCCTCAGGGCCATGAGTGGGTCATGAAGGATGTCCCTGAAAATGCCGCTTCCTTCTCTCGACTTTGTTGGTTTCGGGATTCTGATGACATCGACAACTTGAACCCCGACAACGATATCTCTCTGAGGCCTCGATTCGCCATTGTTTTCGGCCGCCATGATTGAGGCTTGGTGAAGAAGGCTAAACTATATGTTAAAAGACTTGAGAGTTGAGCTTTGTTGATAAAAGAGGAGTTTGAACTTTGGAGTTGGAGTAAAGTTGGCCAATTACCCAAATTGGCCTTGGAATAATGTAAAGTCTAATAGATGTACATAAATAAAACATAATAAAGTGAAAAAAATAGTAATTCAAAAATTAAATATGTATAAATGCTTTGGTTCTACCAAAGATATTAAAATTTATACTTATCTATAGCTTTGAAATAGTTGTTTTATATTTCAATGATAATTGACATGG ATGGCAAGAACTTGTATGGCTATGCAGGCAAATGCATTGTTTCTTAGGAAAATGAAACAATTGAAGCGACAATTCAGCAGTGTTGTAATTGAGTCCACAAGCCAACAAGCCCCACATCAAAAAAATGATGAAACAGAAACAGAGCCACAACCCTACAACTCATCCAATTGGGTTCCCCACCCTCGTACTGGAATCTATTTTCCTCAGGGCCATGAGTGGGTCATGAAGGATGTCCCTGAAAATGCCGCTTCCTTCTCTCGACTTTGTTGGTTTCGGGATTCTGATGACATCGACAACTTGAACCCCGACAACGATATCTCTCTGAGGCCTCGATTCGCCATTGTTTTCGGCCGCCATGATTGA MARTCMAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDISLRPRFAIVFGRHD Homology
BLAST of ClCG02G006680 vs. NCBI nr
Match: XP_038887565.1 (uncharacterized protein LOC120077680 [Benincasa hispida]) HSP 1 Score: 200.3 bits (508), Expect = 9.5e-48 Identity = 97/120 (80.83%), Postives = 104/120 (86.67%), Query Frame = 0
BLAST of ClCG02G006680 vs. NCBI nr
Match: XP_011658881.1 (uncharacterized protein LOC105436102 [Cucumis sativus] >KAE8645844.1 hypothetical protein Csa_017261 [Cucumis sativus]) HSP 1 Score: 176.0 bits (445), Expect = 1.9e-40 Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 0
BLAST of ClCG02G006680 vs. NCBI nr
Match: XP_008455025.1 (PREDICTED: uncharacterized protein LOC103495298 [Cucumis melo]) HSP 1 Score: 175.3 bits (443), Expect = 3.3e-40 Identity = 83/109 (76.15%), Postives = 97/109 (88.99%), Query Frame = 0
BLAST of ClCG02G006680 vs. NCBI nr
Match: XP_022148740.1 (uncharacterized protein LOC111017332 [Momordica charantia]) HSP 1 Score: 165.6 bits (418), Expect = 2.6e-37 Identity = 78/114 (68.42%), Postives = 93/114 (81.58%), Query Frame = 0
BLAST of ClCG02G006680 vs. NCBI nr
Match: KAA0031357.1 (uncharacterized protein E6C27_scaffold139G001120 [Cucumis melo var. makuwa] >TYK06809.1 uncharacterized protein E5676_scaffold13G001120 [Cucumis melo var. makuwa]) HSP 1 Score: 157.1 bits (396), Expect = 9.2e-35 Identity = 72/92 (78.26%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of ClCG02G006680 vs. ExPASy TrEMBL
Match: A0A1S3C0N8 (uncharacterized protein LOC103495298 OS=Cucumis melo OX=3656 GN=LOC103495298 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40 Identity = 83/109 (76.15%), Postives = 97/109 (88.99%), Query Frame = 0
BLAST of ClCG02G006680 vs. ExPASy TrEMBL
Match: A0A0A0K7S0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071500 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.3e-39 Identity = 81/102 (79.41%), Postives = 90/102 (88.24%), Query Frame = 0
BLAST of ClCG02G006680 vs. ExPASy TrEMBL
Match: A0A6J1D3R9 (uncharacterized protein LOC111017332 OS=Momordica charantia OX=3673 GN=LOC111017332 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37 Identity = 78/114 (68.42%), Postives = 93/114 (81.58%), Query Frame = 0
BLAST of ClCG02G006680 vs. ExPASy TrEMBL
Match: A0A5D3C8X8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001120 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 4.5e-35 Identity = 72/92 (78.26%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of ClCG02G006680 vs. ExPASy TrEMBL
Match: A0A6J1JN70 (uncharacterized protein LOC111486209 OS=Cucurbita maxima OX=3661 GN=LOC111486209 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 4.6e-32 Identity = 78/117 (66.67%), Postives = 87/117 (74.36%), Query Frame = 0
BLAST of ClCG02G006680 vs. TAIR 10
Match: AT3G19550.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 64.3 bits (155), Expect = 7.6e-11 Identity = 41/105 (39.05%), Postives = 55/105 (52.38%), Query Frame = 0
BLAST of ClCG02G006680 vs. TAIR 10
Match: AT1G73120.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; EXPRESSED IN: root, cultured cell; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 41.2 bits (95), Expect = 6.9e-04 Identity = 27/83 (32.53%), Postives = 42/83 (50.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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