ClCG02G006680 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG02G006680
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
LocationCG_Chr02: 7684632 .. 7686898 (-)
RNA-Seq ExpressionClCG02G006680
SyntenyClCG02G006680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAAGTTGTTTGGCTTTGGATTTTCCTATAAATTTTGGCTGATTTTCTTTCTCAGAAAGTGGTGGTGTGTTTGATTATATGGCAAGAACTTGTATGGCTATGCAGGCAAATGCATTGTTTCTTAGGTAAAATAATCTTGGCTCTTTTGAGTGATTTGATTTTGTCATTTTCTTTGAGTGGAATGGTATGTGGGGTCTAAACGTTCTAACTTTTTGATTTCGACTATGAGTATATATCTAAATTAGTTGAACTATGTTCAAATTATTGGTAAAAGTATCATACTTATGTTTATATATTATATTGGTTAAAATACTATTTTGGTTCTTACACTGGAAGATTTGTTTAATTTTTAGTCTCTGTATTTTTAATAAATCTTAAATTTAGTCTCTCAAAGTTTTGTTTTTTTTTTTTTTTTGTCAAAATTTGTTAAATAATAATAAGAATTTTTAGGCAAGAAAATTAGTGAAATTTCTAATTTGGATAATAAAGTTTTTAAAAAATCAACAATAAACAAACATAATAACTAAATTTAAGATTTATTAAAAGTAAAAGGGCTAAAATGGAAAATGTGAAAGTAACTAGATTAAAATTGAACAAGGTTTAATATACTTTTGATTTTGGTTCATTTTGGTTCATGTACTTTCAAAATGTTCATTTTGATCCTTATACTTTCAACTTTAGTTCATTTTTGTCCTTATACTTTCAAAATGTTTATTTTGGTCTTTGTACTTTCAACTTTTGTTCATTTTGGTTCTTGAACTTTCAAAAAGTAATTATTTTGATCCCTTAAAAATGAAATAAAAATCAAAATGAAAGGATAAAAATAGTTACTTTTAAAAAGTATAAGGACCAAATTGAACCAAAATTAAGTATAGAGACCAAAATGAACAAAATTGAAAATATAGAGACCACAATGAATAAAATTGAAAATATAGAGACCAAAATGAATATTTTAAAAAAACATAAACCAAAATAAATCGAAATTAGAAATATAGGAATATTTACACAATTAAACAAACAACCTCCAATTGCCTATTATATTCTAGTTTTTTTTTTTTTTTTTTTTTTAATTGGCTCAGAAGAAAGTCTATAAATGAAAGTGTTTGTGGAATTTAGAAGTCTATATGAGTAGAAGAAAGTGATTGTGGAAAAGAAAAAGGTACTCTATGAGAAAGTGGATGGAAAAAGAAAGTTGCACCTTTATTTTTATTTTTTATTTTTTATTTTTTTCCCTTCTTGCTGTTTCTTTTTTAAACATAGTTTATCATTTCATTTCACCATGATTAAGCTAGCTATGTTGATGGTGCTTTTGGGGATTACTAAAAGGGAACTTTTGTTAGGATAAAAACCTAGTTTCCATTCAAATTTGATTTTAAAAGTTGAAAACACTTTAACTTTAAAGTGTTTTATGGAAAAGTATTGTGTGGTAACTGTGGTTTTAGTTTCAAGTGCTTCACAAAATTGTATAACCATTGATAAATGTAAATTCTTTTATTTAGTACTTTTTATGAAAGTACTTTGGCTAAATTGCTTATTTTAAAAAAATGATTAAACACCCTATTACATATATAATTTCAAATACCCATTTATTCTACATATTTGAATAAATAAACCAATTAACAAAAGATATTTGAAACTCCTAATTAGTTATATGACAGGAAAATGAAACAATTGAAGCGACAATTCAGCAGTGTTGTAATTGAGTCCACAAGCCAACAAGCCCCACATCAAAAAAATGATGAAACAGAAACAGAGCCACAACCCTACAACTCATCCAATTGGGTTCCCCACCCTCGTACTGGAATCTATTTTCCTCAGGGCCATGAGTGGGTCATGAAGGATGTCCCTGAAAATGCCGCTTCCTTCTCTCGACTTTGTTGGTTTCGGGATTCTGATGACATCGACAACTTGAACCCCGACAACGATATCTCTCTGAGGCCTCGATTCGCCATTGTTTTCGGCCGCCATGATTGAGGCTTGGTGAAGAAGGCTAAACTATATGTTAAAAGACTTGAGAGTTGAGCTTTGTTGATAAAAGAGGAGTTTGAACTTTGGAGTTGGAGTAAAGTTGGCCAATTACCCAAATTGGCCTTGGAATAATGTAAAGTCTAATAGATGTACATAAATAAAACATAATAAAGTGAAAAAAATAGTAATTCAAAAATTAAATATGTATAAATGCTTTGGTTCTACCAAAGATATTAAAATTTATACTTATCTATAGCTTTGAAATAGTTGTTTTATATTTCAATGATAATTGACATGG

mRNA sequence

ACAAAGTTGTTTGGCTTTGGATTTTCCTATAAATTTTGGCTGATTTTCTTTCTCAGAAAGTGGTGGTGTGTTTGATTATATGGCAAGAACTTGTATGGCTATGCAGGCAAATGCATTGTTTCTTAGGAAAATGAAACAATTGAAGCGACAATTCAGCAGTGTTGTAATTGAGTCCACAAGCCAACAAGCCCCACATCAAAAAAATGATGAAACAGAAACAGAGCCACAACCCTACAACTCATCCAATTGGGTTCCCCACCCTCGTACTGGAATCTATTTTCCTCAGGGCCATGAGTGGGTCATGAAGGATGTCCCTGAAAATGCCGCTTCCTTCTCTCGACTTTGTTGGTTTCGGGATTCTGATGACATCGACAACTTGAACCCCGACAACGATATCTCTCTGAGGCCTCGATTCGCCATTGTTTTCGGCCGCCATGATTGAGGCTTGGTGAAGAAGGCTAAACTATATGTTAAAAGACTTGAGAGTTGAGCTTTGTTGATAAAAGAGGAGTTTGAACTTTGGAGTTGGAGTAAAGTTGGCCAATTACCCAAATTGGCCTTGGAATAATGTAAAGTCTAATAGATGTACATAAATAAAACATAATAAAGTGAAAAAAATAGTAATTCAAAAATTAAATATGTATAAATGCTTTGGTTCTACCAAAGATATTAAAATTTATACTTATCTATAGCTTTGAAATAGTTGTTTTATATTTCAATGATAATTGACATGG

Coding sequence (CDS)

ATGGCAAGAACTTGTATGGCTATGCAGGCAAATGCATTGTTTCTTAGGAAAATGAAACAATTGAAGCGACAATTCAGCAGTGTTGTAATTGAGTCCACAAGCCAACAAGCCCCACATCAAAAAAATGATGAAACAGAAACAGAGCCACAACCCTACAACTCATCCAATTGGGTTCCCCACCCTCGTACTGGAATCTATTTTCCTCAGGGCCATGAGTGGGTCATGAAGGATGTCCCTGAAAATGCCGCTTCCTTCTCTCGACTTTGTTGGTTTCGGGATTCTGATGACATCGACAACTTGAACCCCGACAACGATATCTCTCTGAGGCCTCGATTCGCCATTGTTTTCGGCCGCCATGATTGA

Protein sequence

MARTCMAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDISLRPRFAIVFGRHD
Homology
BLAST of ClCG02G006680 vs. NCBI nr
Match: XP_038887565.1 (uncharacterized protein LOC120077680 [Benincasa hispida])

HSP 1 Score: 200.3 bits (508), Expect = 9.5e-48
Identity = 97/120 (80.83%), Postives = 104/120 (86.67%), Query Frame = 0

Query: 1   MARTCMAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPH 60
           MARTCMA+QANALFLRKM+QL+RQFSS VIES  QQAP+QK DETETE   YNSS WVPH
Sbjct: 1   MARTCMAVQANALFLRKMRQLRRQFSSFVIESRGQQAPNQKEDETETESLSYNSSTWVPH 60

Query: 61  PRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDISLRPRFAIVFGRHD 120
           PRTGIYFPQGHEWVMKD+PENAASFS+LCWFRDSD ID+LN DND S RPRFA VF   D
Sbjct: 61  PRTGIYFPQGHEWVMKDIPENAASFSQLCWFRDSDGIDDLNLDNDNSPRPRFATVFSGRD 120

BLAST of ClCG02G006680 vs. NCBI nr
Match: XP_011658881.1 (uncharacterized protein LOC105436102 [Cucumis sativus] >KAE8645844.1 hypothetical protein Csa_017261 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 1.9e-40
Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 0

Query: 1   MARTCMAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPH 60
           M RT M +QAN LFLRKMKQLK QF  +VI+STSQQA ++K+DETETE  PYNSS WVPH
Sbjct: 1   MGRTRMPLQANPLFLRKMKQLKWQFRGLVIDSTSQQALNKKDDETETESLPYNSSTWVPH 60

Query: 61  PRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDIS 108
           PRTGIYFPQGHEWVMKD+PENAASF RLCWFRDSDD+D+LNPD D S
Sbjct: 61  PRTGIYFPQGHEWVMKDIPENAASFPRLCWFRDSDDVDDLNPDKDTS 107

BLAST of ClCG02G006680 vs. NCBI nr
Match: XP_008455025.1 (PREDICTED: uncharacterized protein LOC103495298 [Cucumis melo])

HSP 1 Score: 175.3 bits (443), Expect = 3.3e-40
Identity = 83/109 (76.15%), Postives = 97/109 (88.99%), Query Frame = 0

Query: 1   MARTCMAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPH 60
           M+RT + +QAN LFLRKMKQLKRQF S+VI+STSQQ  ++K+DETET+  PYNSS WVPH
Sbjct: 1   MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPH 60

Query: 61  PRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDISLR 110
           PRTGIYFPQGHEWVMKD+PENAASFSRLCWFRDSDD+D+LN +N+ S R
Sbjct: 61  PRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTSSR 109

BLAST of ClCG02G006680 vs. NCBI nr
Match: XP_022148740.1 (uncharacterized protein LOC111017332 [Momordica charantia])

HSP 1 Score: 165.6 bits (418), Expect = 2.6e-37
Identity = 78/114 (68.42%), Postives = 93/114 (81.58%), Query Frame = 0

Query: 7   AMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPHPRTGIY 66
           A++ANA+ LR+MKQL+RQFSS  +ES +++   Q+ D  ETEP PYNSS WVPHPRTGIY
Sbjct: 48  AVKANAILLRRMKQLRRQFSSFAMESKAKEEALQEED-IETEPWPYNSSTWVPHPRTGIY 107

Query: 67  FPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDISLRPRFAIVFGRHD 121
           FPQGHEWVMKDVPENAASFSR+CWFRDSD +D+ NPD + S+ PRFA  FG  D
Sbjct: 108 FPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDPNPDQNPSVGPRFAAAFGTQD 160

BLAST of ClCG02G006680 vs. NCBI nr
Match: KAA0031357.1 (uncharacterized protein E6C27_scaffold139G001120 [Cucumis melo var. makuwa] >TYK06809.1 uncharacterized protein E5676_scaffold13G001120 [Cucumis melo var. makuwa])

HSP 1 Score: 157.1 bits (396), Expect = 9.2e-35
Identity = 72/92 (78.26%), Postives = 83/92 (90.22%), Query Frame = 0

Query: 18  MKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPHPRTGIYFPQGHEWVMKD 77
           MKQLKRQF S+VI+STSQQ  ++K+DETET+  PYNSS WVPHPRTGIYFPQGHEWVMKD
Sbjct: 1   MKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKD 60

Query: 78  VPENAASFSRLCWFRDSDDIDNLNPDNDISLR 110
           +PENAASFSRLCWFRDSDD+D+LN +N+ S R
Sbjct: 61  IPENAASFSRLCWFRDSDDVDDLNHENNTSSR 92

BLAST of ClCG02G006680 vs. ExPASy TrEMBL
Match: A0A1S3C0N8 (uncharacterized protein LOC103495298 OS=Cucumis melo OX=3656 GN=LOC103495298 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40
Identity = 83/109 (76.15%), Postives = 97/109 (88.99%), Query Frame = 0

Query: 1   MARTCMAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPH 60
           M+RT + +QAN LFLRKMKQLKRQF S+VI+STSQQ  ++K+DETET+  PYNSS WVPH
Sbjct: 1   MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPH 60

Query: 61  PRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDISLR 110
           PRTGIYFPQGHEWVMKD+PENAASFSRLCWFRDSDD+D+LN +N+ S R
Sbjct: 61  PRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTSSR 109

BLAST of ClCG02G006680 vs. ExPASy TrEMBL
Match: A0A0A0K7S0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071500 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.3e-39
Identity = 81/102 (79.41%), Postives = 90/102 (88.24%), Query Frame = 0

Query: 6   MAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPHPRTGI 65
           M +QAN LFLRKMKQLK QF  +VI+STSQQA ++K+DETETE  PYNSS WVPHPRTGI
Sbjct: 1   MPLQANPLFLRKMKQLKWQFRGLVIDSTSQQALNKKDDETETESLPYNSSTWVPHPRTGI 60

Query: 66  YFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDIS 108
           YFPQGHEWVMKD+PENAASF RLCWFRDSDD+D+LNPD D S
Sbjct: 61  YFPQGHEWVMKDIPENAASFPRLCWFRDSDDVDDLNPDKDTS 102

BLAST of ClCG02G006680 vs. ExPASy TrEMBL
Match: A0A6J1D3R9 (uncharacterized protein LOC111017332 OS=Momordica charantia OX=3673 GN=LOC111017332 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37
Identity = 78/114 (68.42%), Postives = 93/114 (81.58%), Query Frame = 0

Query: 7   AMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPHPRTGIY 66
           A++ANA+ LR+MKQL+RQFSS  +ES +++   Q+ D  ETEP PYNSS WVPHPRTGIY
Sbjct: 48  AVKANAILLRRMKQLRRQFSSFAMESKAKEEALQEED-IETEPWPYNSSTWVPHPRTGIY 107

Query: 67  FPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDISLRPRFAIVFGRHD 121
           FPQGHEWVMKDVPENAASFSR+CWFRDSD +D+ NPD + S+ PRFA  FG  D
Sbjct: 108 FPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDPNPDQNPSVGPRFAAAFGTQD 160

BLAST of ClCG02G006680 vs. ExPASy TrEMBL
Match: A0A5D3C8X8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001120 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.5e-35
Identity = 72/92 (78.26%), Postives = 83/92 (90.22%), Query Frame = 0

Query: 18  MKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPHPRTGIYFPQGHEWVMKD 77
           MKQLKRQF S+VI+STSQQ  ++K+DETET+  PYNSS WVPHPRTGIYFPQGHEWVMKD
Sbjct: 1   MKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKD 60

Query: 78  VPENAASFSRLCWFRDSDDIDNLNPDNDISLR 110
           +PENAASFSRLCWFRDSDD+D+LN +N+ S R
Sbjct: 61  IPENAASFSRLCWFRDSDDVDDLNHENNTSSR 92

BLAST of ClCG02G006680 vs. ExPASy TrEMBL
Match: A0A6J1JN70 (uncharacterized protein LOC111486209 OS=Cucurbita maxima OX=3661 GN=LOC111486209 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.6e-32
Identity = 78/117 (66.67%), Postives = 87/117 (74.36%), Query Frame = 0

Query: 1   MARTCMAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPH 60
           MART  ++QANAL  RK+KQL+RQFSS+   S      H K +ETETEP  YNSS WVPH
Sbjct: 1   MART--SVQANALLFRKVKQLRRQFSSLANSS------HNK-EETETEPLSYNSSTWVPH 60

Query: 61  PRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDISLRPRFAIVFG 118
           PRTGIYFPQGHEWVMKDVPENAASFS + WFRD D +D+LNPD   S  PR A V G
Sbjct: 61  PRTGIYFPQGHEWVMKDVPENAASFSPVFWFRDFDGVDDLNPDTHPSPGPRLAAVLG 108

BLAST of ClCG02G006680 vs. TAIR 10
Match: AT3G19550.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 7.6e-11
Identity = 41/105 (39.05%), Postives = 55/105 (52.38%), Query Frame = 0

Query: 1   MARTCMAMQANALFLRKMKQLKRQ--FSSVVIESTSQQAPHQKNDETETEPQPYNSSNWV 60
           M RT +A +A  L LR  KQ + +   SS   +S      + ++             +WV
Sbjct: 1   MGRTGIA-KAPKLLLRSWKQFQGRAGISSKAAKSNPMIVDYFEDISDHNLKFSGEEESWV 60

Query: 61  PHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPD 104
           PHPRTGI+FP G E VM+DVP  AASF    W R+ D +D  +PD
Sbjct: 61  PHPRTGIFFPPGQESVMEDVPNGAASFDMTFWLRNVDGVDKPDPD 104

BLAST of ClCG02G006680 vs. TAIR 10
Match: AT1G73120.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; EXPRESSED IN: root, cultured cell; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 6.9e-04
Identity = 27/83 (32.53%), Postives = 42/83 (50.60%), Query Frame = 0

Query: 7  AMQANALFLRKMKQL---KRQFSSVVIESTSQQAPHQKNDETETEPQPYN-------SSN 66
          A   N +F++ M +    K+  S  ++  T +       +E +T    Y        +S+
Sbjct: 11 AQTMNTMFVKPMLRKSIHKKSASHDIVRDTVKTEGSSSGEEVKTMRGFYGAGETSSPASS 70

Query: 67 WVPHPRTGIYFPQGHEWVMKDVP 80
          WVPH  TGIY+P+G E VM+DVP
Sbjct: 71 WVPHEGTGIYYPKGQEKVMQDVP 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038887565.19.5e-4880.83uncharacterized protein LOC120077680 [Benincasa hispida][more]
XP_011658881.11.9e-4078.50uncharacterized protein LOC105436102 [Cucumis sativus] >KAE8645844.1 hypothetica... [more]
XP_008455025.13.3e-4076.15PREDICTED: uncharacterized protein LOC103495298 [Cucumis melo][more]
XP_022148740.12.6e-3768.42uncharacterized protein LOC111017332 [Momordica charantia][more]
KAA0031357.19.2e-3578.26uncharacterized protein E6C27_scaffold139G001120 [Cucumis melo var. makuwa] >TYK... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3C0N81.6e-4076.15uncharacterized protein LOC103495298 OS=Cucumis melo OX=3656 GN=LOC103495298 PE=... [more]
A0A0A0K7S01.3e-3979.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071500 PE=4 SV=1[more]
A0A6J1D3R91.3e-3768.42uncharacterized protein LOC111017332 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A5D3C8X84.5e-3578.26Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1JN704.6e-3266.67uncharacterized protein LOC111486209 OS=Cucurbita maxima OX=3661 GN=LOC111486209... [more]
Match NameE-valueIdentityDescription
AT3G19550.17.6e-1139.05unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G73120.16.9e-0432.53unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004926Late embryogenesis abundant protein, LEA_3 subgroupPFAMPF03242LEA_3coord: 1..71
e-value: 6.1E-6
score: 26.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..59
NoneNo IPR availablePANTHERPTHR35109GLUTAMATE RACEMASEcoord: 1..108
NoneNo IPR availablePANTHERPTHR35109:SF1GLUTAMATE RACEMASEcoord: 1..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G006680.1ClCG02G006680.1mRNA