ClCG02G006610 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G006610
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr02: 7623317 .. 7624142 (+)
RNA-Seq Expression	ClCG02G006610
Synteny	ClCG02G006610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGAAAAGGTAGCTCGAGTTTAGACCACGCTACCCACTCCGTCGATCACACGTACTGGAGGAGAAGAAGTGTGCACTACCCATGCTCGGGGCCCACACCGACGAAAGCTCCACGACACTCTAATCGAGTTCGAGCTCTGCCGTTGTCCGCTTCTATGGGTTGGTCGGAGCAGTTTGAGAGGACTCCATGAAACCCTAGCTGTGAGAGGGTTCACAATAATCACCCCACGCCATCGGACCATGCTAAATGTTCTATTTAGGTCCCACTGCCACCGTCATCTTCATCCATTGACACCCAGAGAGTGCCGACAACTCCAACTTCACGCCAATCTGGCTAGTCGGCAATTGTTGACAATAAAACCACTGATGGGTCTTCCTCTAATGCCACCTAAGCGGGTTCTATGGAACCCAAGAAACGATCAAAGAGGTGGTGGGACAAGGTTAGAAGGCTGGGAGCCAAAAAAAGGTAGGCTCTTGAAGTAAAAAACGAAGAAGAGGCCCAATGCCCAACCCAACTAGAGGCGTTCCAATTGAGGATGGTTAGGCCCCATCCTCTTCTATCCCTACTAATGCTCCAATCGAAGAGGTTTTTAGTAGGGAGTTATGGGCTATGGTGATGAAGGAGGTCGTTCAGATAGCCAAGTACTTTGCTAATGAGATAAGAGAGAAAGGCAGTACGAGGAACTTGACCGTGCTTTAAGGTAAGCATTAGCTAAACATGAGCAAGCTAAGATGAGGGCCAAGGACTTGGCGGCCCAGGAAAAAGATAGAGATGAGGAAGATAGACTAAGGCTTGAGGAAGAAGAAGTCGACATAGAATGA

mRNA sequence

ATGGAGAGAAAAGGTAGCTCGAGTTTAGACCACGCTACCCACTCCGTCGATCACACGTACTGGAGGAGAAGAAGTGTGCACTACCCATGCTCGGGGCCCACACCGACGAAAGCTCCACGACACTCTAATCGAGTTCGAGCTCTGCCGTTGTCCGCTTCTATGGGTTGGTCGGAGCAGTCCCACTGCCACCGTCATCTTCATCCATTGACACCCAGAGAGTGCCGACAACTCCAACTTCACGCCAATCTGGCTAGTCGGCAATTGTTGACAATAAAACCACTGATGGGTCTTCCTCTAATGCCACCTAAGCGGGTTCTATGGAACCCAAGAAACGATCAAAGAGGTGGTGGGACAAGGTTAGAAGGCTGGGAGCCAAAAAAAGCTAAACATGAGCAAGCTAAGATGAGGGCCAAGGACTTGGCGGCCCAGGAAAAAGATAGAGATGAGGAAGATAGACTAAGGCTTGAGGAAGAAGAAGTCGACATAGAATGA

Coding sequence (CDS)

ATGGAGAGAAAAGGTAGCTCGAGTTTAGACCACGCTACCCACTCCGTCGATCACACGTACTGGAGGAGAAGAAGTGTGCACTACCCATGCTCGGGGCCCACACCGACGAAAGCTCCACGACACTCTAATCGAGTTCGAGCTCTGCCGTTGTCCGCTTCTATGGGTTGGTCGGAGCAGTCCCACTGCCACCGTCATCTTCATCCATTGACACCCAGAGAGTGCCGACAACTCCAACTTCACGCCAATCTGGCTAGTCGGCAATTGTTGACAATAAAACCACTGATGGGTCTTCCTCTAATGCCACCTAAGCGGGTTCTATGGAACCCAAGAAACGATCAAAGAGGTGGTGGGACAAGGTTAGAAGGCTGGGAGCCAAAAAAAGCTAAACATGAGCAAGCTAAGATGAGGGCCAAGGACTTGGCGGCCCAGGAAAAAGATAGAGATGAGGAAGATAGACTAAGGCTTGAGGAAGAAGAAGTCGACATAGAATGA

Protein sequence

MERKGSSSLDHATHSVDHTYWRRRSVHYPCSGPTPTKAPRHSNRVRALPLSASMGWSEQSHCHRHLHPLTPRECRQLQLHANLASRQLLTIKPLMGLPLMPPKRVLWNPRNDQRGGGTRLEGWEPKKAKHEQAKMRAKDLAAQEKDRDEEDRLRLEEEEVDIE

Homology

The following BLAST results are available for this feature:

BLAST of ClCG02G006610 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG02G006610 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG02G006610 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG02G006610 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 138..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G006610.1	ClCG02G006610.1	mRNA