ClCG02G006520 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G006520
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	transcription factor bHLH113
Location	CG_Chr02: 7491248 .. 7492434 (-)
RNA-Seq Expression	ClCG02G006520
Synteny	ClCG02G006520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAAAACAGTCCTTTACGAGGGACCACCCCGGACCAACAACAGCTACCAGTTTCTCTCAGCTTCTGTTTTCCTCACAACATGATGATGATGATAATGATGATATTGATAAAAATCATCATCTTCATCATCAAATCTTTGATTACTCTGTTTCCTCTGCTTCTTCTCCTTTCGCTATTGATAACCCACCCAAGATGCTCTGTTTCGGCAGCAAAGAAGAAGACGAAGAACATCCACAGCTGGGTTTTAAATCGCATCAAAGATCAGGCCACGCATGCAGTGATTCCTCTTCAACTTCTTCTGGGAATGGCCTCAAATCTGATTCCGTAAACACAAAAATTTTAACCTTTTAATTCCTTTCCTTGGTTTTTCCTGTTTCTTTCTTTTATGACCTTTTTAAAGTTAAACTGTTGGTTTTTGTAGAAATTGAAAAGGAGAAATGGATCAAACCCAGAAATGTCCGTCATTAAAGAAGCTCCTTTACTGAATCAGAAAGCTTCGAAAAAGACCAAACCTGATGCTACCTGTTCTGCTGGACATGCAAAGGTCAATTTTTACCATAACTTTCATGTTCTTCTTTTTCTTTTACTCTGTTTCTGAAATGGTTTATTTTTATTTTTTATTTTTTATTATTTTTTTTTTATTTAGAGGAAGGAGAAATTAGGGGAAAGAATCACAGCACTACAACAATTGGTTTCACCCTTTGGCAAGGTTACAATAAACAAGAACATTTAATTTGATTCTTCAATTTTTTGAGAATTTAATATGAATATATATATTTTTTTAATGTTGATGGATTCAAAAAACAGACAGATACAGCATCAGTACTACATGAAGCAATGGGTTACATCAAATTTCTACATGAACAAGTTCAAGTCTTGTGCAGTCCTTACTTGCAAAAAAGTCAGCTGCTTTCTTCTCAATCAACCAGTGTAAGCACTTTCTGACTAAAAAGAAGAAGCTTTATCATTATTTTTATTGTTATTTTATAAAAAAGAAAACCCATTTTTTTTTTTTTATAATTTTCTTTATGTTTCTGAAGGGAAGAGAAAATGGGGAAATAGAGGGGGATCTGAAAAGCAGGGGGTTGTGTTTGATTCCAGTGGACTGTAGCTTGCATTTGGCTGATTGTACAGTTGCAGACTTTTGGTCTCCAGCCATGGCTATGGGGAGGAAGCTTTGA

mRNA sequence

ATGGCGGAAAAACAGTCCTTTACGAGGGACCACCCCGGACCAACAACAGCTACCAGTTTCTCTCAGCTTCTGTTTTCCTCACAACATGATGATGATGATAATGATGATATTGATAAAAATCATCATCTTCATCATCAAATCTTTGATTACTCTGTTTCCTCTGCTTCTTCTCCTTTCGCTATTGATAACCCACCCAAGATGCTCTGTTTCGGCAGCAAAGAAGAAGACGAAGAACATCCACAGCTGGGTTTTAAATCGCATCAAAGATCAGGCCACGCATGCAGTGATTCCTCTTCAACTTCTTCTGGGAATGGCCTCAAATCTGATTCCAAATTGAAAAGGAGAAATGGATCAAACCCAGAAATGTCCGTCATTAAAGAAGCTCCTTTACTGAATCAGAAAGCTTCGAAAAAGACCAAACCTGATGCTACCTGTTCTGCTGGACATGCAAAGAGGAAGGAGAAATTAGGGGAAAGAATCACAGCACTACAACAATTGGTTTCACCCTTTGGCAAGACAGATACAGCATCAGTACTACATGAAGCAATGGGTTACATCAAATTTCTACATGAACAAGTTCAAGTCTTGTGCAGTCCTTACTTGCAAAAAAGTCAGCTGCTTTCTTCTCAATCAACCAGTGGAAGAGAAAATGGGGAAATAGAGGGGGATCTGAAAAGCAGGGGGTTGTGTTTGATTCCAGTGGACTGTAGCTTGCATTTGGCTGATTGTACAGTTGCAGACTTTTGGTCTCCAGCCATGGCTATGGGGAGGAAGCTTTGA

Coding sequence (CDS)

ATGGCGGAAAAACAGTCCTTTACGAGGGACCACCCCGGACCAACAACAGCTACCAGTTTCTCTCAGCTTCTGTTTTCCTCACAACATGATGATGATGATAATGATGATATTGATAAAAATCATCATCTTCATCATCAAATCTTTGATTACTCTGTTTCCTCTGCTTCTTCTCCTTTCGCTATTGATAACCCACCCAAGATGCTCTGTTTCGGCAGCAAAGAAGAAGACGAAGAACATCCACAGCTGGGTTTTAAATCGCATCAAAGATCAGGCCACGCATGCAGTGATTCCTCTTCAACTTCTTCTGGGAATGGCCTCAAATCTGATTCCAAATTGAAAAGGAGAAATGGATCAAACCCAGAAATGTCCGTCATTAAAGAAGCTCCTTTACTGAATCAGAAAGCTTCGAAAAAGACCAAACCTGATGCTACCTGTTCTGCTGGACATGCAAAGAGGAAGGAGAAATTAGGGGAAAGAATCACAGCACTACAACAATTGGTTTCACCCTTTGGCAAGACAGATACAGCATCAGTACTACATGAAGCAATGGGTTACATCAAATTTCTACATGAACAAGTTCAAGTCTTGTGCAGTCCTTACTTGCAAAAAAGTCAGCTGCTTTCTTCTCAATCAACCAGTGGAAGAGAAAATGGGGAAATAGAGGGGGATCTGAAAAGCAGGGGGTTGTGTTTGATTCCAGTGGACTGTAGCTTGCATTTGGCTGATTGTACAGTTGCAGACTTTTGGTCTCCAGCCATGGCTATGGGGAGGAAGCTTTGA

Protein sequence

MAEKQSFTRDHPGPTTATSFSQLLFSSQHDDDDNDDIDKNHHLHHQIFDYSVSSASSPFAIDNPPKMLCFGSKEEDEEHPQLGFKSHQRSGHACSDSSSTSSGNGLKSDSKLKRRNGSNPEMSVIKEAPLLNQKASKKTKPDATCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCSLHLADCTVADFWSPAMAMGRKL

Homology

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BLAST of ClCG02G006520 vs. NCBI nr
Match: XP_038888642.1 (transcription factor bHLH113-like [Benincasa hispida])

HSP 1 Score: 455.3 bits (1170), Expect = 3.5e-124
Identity = 233/262 (88.93%), Postives = 244/262 (93.13%), Query Frame = 0


Query: 1   MAEKQSFTRDHPGPTTATSFSQLLFSSQHDDDDND---DIDKNHHLHHQIFDYSVSSASS 60
           MA+ QSF+ DH GPTTAT+FSQLLFSSQHDD+ +D   D+DK+H LHHQIFDYSVSSAS+
Sbjct: 1   MADNQSFSGDHLGPTTATTFSQLLFSSQHDDETDDIDVDVDKSHPLHHQIFDYSVSSASA 60

Query: 61  PFAIDNPPKMLCFGSKEEDEEHPQLGFKSHQRSGHACSDSSSTSSGNGLKSDSKLKRRNG 120
            FAIDNPPKMLCFGSKEEDE+HPQLGFKS QRS HACSDSSSTSSGNGLKSDSKLKRRNG
Sbjct: 61  SFAIDNPPKMLCFGSKEEDEDHPQLGFKSRQRSSHACSDSSSTSSGNGLKSDSKLKRRNG 120

Query: 121 SNPEMSVIKEAPLLNQKASKKTKPDATCSAGHAKRKEKLGERITALQQLVSPFGKTDTAS 180
           SNPE + IKEA LLNQKASKKTK DA CSAGHAKRKEKLGERITALQQLVSPFGKTDTAS
Sbjct: 121 SNPETAAIKEASLLNQKASKKTKSDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTAS 180

Query: 181 VLHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCS 240
           VLHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQS SGRENGE EGDLKSRGLCLIPVDCS
Sbjct: 181 VLHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSVSGRENGETEGDLKSRGLCLIPVDCS 240

Query: 241 LHLADCTVADFWSPAMAMGRKL 260
           LHLA+CTVADFWSPAMAMGRKL
Sbjct: 241 LHLANCTVADFWSPAMAMGRKL 262

[Close]

BLAST of ClCG02G006520 vs. NCBI nr
Match: XP_008455002.1 (PREDICTED: transcription factor bHLH113 [Cucumis melo])

HSP 1 Score: 415.6 bits (1067), Expect = 3.1e-112
Identity = 214/258 (82.95%), Postives = 230/258 (89.15%), Query Frame = 0


Query: 1   MAEKQSFTRDHPGPTTATSFSQLLFSSQHDDDDNDDIDKNHHLHHQIFDYSVSSASSPFA 60
           MAE QSF  DH  PTTAT+FSQLLFS  HDDDD++D+D + + HHQIFDYSVSS+SS FA
Sbjct: 1   MAENQSFAGDHLRPTTATTFSQLLFSPHHDDDDDNDVDVDKN-HHQIFDYSVSSSSSSFA 60

Query: 61  IDNPPKMLCFGSKEEDEEHPQLGFKSHQRSGHACSDSSSTSSGNGLKSDSKLKRRNGSNP 120
           IDNPPKMLCFG+KEED+EHPQLGFKS QRS HACSDSSS SSGNGLK + KLKRRNGSNP
Sbjct: 61  IDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGSNP 120

Query: 121 EMSVIKEAPLLNQKASKKTKPDATCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180
           E + IKE       ASKKTKP+A CSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH
Sbjct: 121 ETAAIKE-------ASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180

Query: 181 EAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCSLHL 240
           EAMGYIKFLHEQVQVLCSPYLQKSQLLSSQS +G+ENGE EGDLKSRGLCLIPVDCSLHL
Sbjct: 181 EAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSATGKENGETEGDLKSRGLCLIPVDCSLHL 240

Query: 241 ADCTVADFWSPAMAMGRK 259
           A+CTVADFWSPAMAMG+K
Sbjct: 241 ANCTVADFWSPAMAMGKK 250

[Close]

BLAST of ClCG02G006520 vs. NCBI nr
Match: XP_004137092.1 (transcription factor bHLH113 [Cucumis sativus] >KGN43876.1 hypothetical protein Csa_017145 [Cucumis sativus])

HSP 1 Score: 409.5 bits (1051), Expect = 2.2e-110
Identity = 215/260 (82.69%), Postives = 229/260 (88.08%), Query Frame = 0


Query: 1   MAEKQSFTRDHPGPTTATSFSQLLFSSQHDDDDNDDIDKN-HHLHHQIFDYSV-SSASSP 60
           MAE QSFT DH  PTTAT+FSQLLFS  HDDDD++D+D +    HHQIFDYSV SS+SS 
Sbjct: 1   MAENQSFTGDHLRPTTATTFSQLLFSPHHDDDDDNDVDVDVDQNHHQIFDYSVSSSSSSS 60

Query: 61  FAIDNPPKMLCFGSKEEDEEHPQLGFKSHQRSGHACSDSSSTSSGNGLKSDSKLKRRNGS 120
           FAIDNPPKMLCFG+KEED+EHPQLGFKS QRS HACSDSSS SSGNGLK + KLKRRNGS
Sbjct: 61  FAIDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGS 120

Query: 121 NPEMSVIKEAPLLNQKASKKTKPDATCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180
           NPEM+ IKE       ASKKTKP+A CSAGHAKRKEKLGERITALQQLVSPFGKTDTASV
Sbjct: 121 NPEMAAIKE-------ASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180

Query: 181 LHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCSL 240
           LHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQS +GR N E EGDLKSRGLCLIPVDCSL
Sbjct: 181 LHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSATGRGNEETEGDLKSRGLCLIPVDCSL 240

Query: 241 HLADCTVADFWSPAMAMGRK 259
           HLA+CTVADFWSPAMAMG+K
Sbjct: 241 HLANCTVADFWSPAMAMGKK 253

[Close]

BLAST of ClCG02G006520 vs. NCBI nr
Match: XP_022972440.1 (transcription factor bHLH113 isoform X2 [Cucurbita maxima])

HSP 1 Score: 350.1 bits (897), Expect = 1.6e-92
Identity = 187/261 (71.65%), Postives = 211/261 (80.84%), Query Frame = 0


Query: 1   MAEKQSFTRDHPGPTTATSFSQLLFSSQHDDDDNDDIDKNHHLHHQIFDYSVSSASSPFA 60
           MAE QS  RD P    AT+FSQLLFS+ HD+ D  D+DK+HH+HHQIF+YSVSS+   FA
Sbjct: 112 MAENQSSGRD-PKTAAATTFSQLLFSADHDEYDEIDVDKHHHVHHQIFEYSVSSS---FA 171

Query: 61  IDNPPKMLCFGSKEEDEEHPQLGFKSHQRSGHACSDSSSTSSGNGLKSDSKLKRRNGSNP 120
           I+NPPKMLCFG+K+E +EHPQLG     RS HACSDS              +KR+NGSNP
Sbjct: 172 IENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGSNP 231

Query: 121 EMSVIKEAPLLNQKASKKTKPDATCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180
           E + IK APL NQKASKKTKP+A CSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH
Sbjct: 232 ETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 291

Query: 181 EAMGYIKFLHEQVQVLCSPYLQKSQLLSS--QSTSGRENGEIEGDLKSRGLCLIPVDCSL 240
           EAMGYIKFLHEQ+QVL SPYL K+QL+S+  Q T GR NGE EG++K RGLCLIPV+CSL
Sbjct: 292 EAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKTEGRGNGETEGEMKGRGLCLIPVECSL 349

Query: 241 HLADCTVADFWSPAMAMGRKL 260
           HLA+CTVADFWSPAMAMGRKL
Sbjct: 352 HLANCTVADFWSPAMAMGRKL 349

[Close]

BLAST of ClCG02G006520 vs. NCBI nr
Match: XP_022952658.1 (transcription factor bHLH113 isoform X2 [Cucurbita moschata])

HSP 1 Score: 343.2 bits (879), Expect = 2.0e-90
Identity = 184/259 (71.04%), Postives = 207/259 (79.92%), Query Frame = 0


Query: 1   MAEKQSFTRDHPGPTTATSFSQLLFSSQHDDDDNDDIDKNHHLHHQIFDYSVSSASSPFA 60
           MAE QS  RD P    AT+FSQLLFS+ HD+DD+ D+DK+HH+HHQIF+YSVSS+   FA
Sbjct: 1   MAENQSSGRD-PKTAAATTFSQLLFSANHDEDDDIDVDKHHHVHHQIFEYSVSSS---FA 60

Query: 61  IDNPPKMLCFGSKEEDEEHPQLGFKSHQRSGHACSDSSSTSSGNGLKSDSKLKRRNGSNP 120
           I+NPPKMLCFG+K+E +EHPQLG     RS HACSDS              +KR+NGSNP
Sbjct: 61  IENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGSNP 120

Query: 121 EMSVIKEAPLLNQKASKKTKPDATCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180
           E + IK APL NQKASKKTKP+A CSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH
Sbjct: 121 ETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180

Query: 181 EAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCSLHL 240
           EAMGYIKFLHEQ+QVL SPYL K+QL       G  NG+ EG+LK RGLCLIPV+CSLHL
Sbjct: 181 EAMGYIKFLHEQIQVLYSPYLDKNQL-------GGGNGDTEGELKGRGLCLIPVECSLHL 229

Query: 241 ADCTVADFWSPAMAMGRKL 260
           A+CTVADFWSPAMAMGRKL
Sbjct: 241 ANCTVADFWSPAMAMGRKL 229

[Close]

BLAST of ClCG02G006520 vs. ExPASy Swiss-Prot
Match: Q9LT67 (Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-28
Identity = 103/254 (40.55%), Postives = 127/254 (50.00%), Query Frame = 0


Query: 18  TSFSQLLFSSQHDDDDNDDIDKNHHLHHQIFDYSVSSASSPFAIDNPPKMLCF-GSKEED 77
           TSFS+LL  S      + D    H     + D    S    F+     +MLCF G  + D
Sbjct: 20  TSFSELLMFSDGVLSSSSD----HQPEGNVGDGGEDSLGFVFSGKTGSRMLCFSGGYQND 79

Query: 78  EEH-------PQLGFK---------SHQRSGHACSDSSSTSSGNGLKSDSKLKRRNGSNP 137
           +E        P  G             + S  AC+   ST      KS +K +   G+  
Sbjct: 80  DESLFLEPSVPTSGVSDLDPSCIKIDCRNSNDACTVDKST------KSSTKKRTGTGNGQ 139

Query: 138 EMSVIKEAPLLNQKASKKTKPD-ATCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASV 197
           E          N+K  KK K +    S G AK RKE+LGERI ALQQLVSP+GKTD ASV
Sbjct: 140 ESD-------QNRKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASV 199

Query: 198 LHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCSL 253
           LHEAMGYIKFL +Q+QVLCSPYL    L     T          DL+SRGLCL+PV  ++
Sbjct: 200 LHEAMGYIKFLQDQIQVLCSPYLINHSLDGGVVTGDVMAAMKAKDLRSRGLCLVPVSSTV 256

[Close]

BLAST of ClCG02G006520 vs. ExPASy Swiss-Prot
Match: Q8GXT3 (Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.6e-26
Identity = 62/122 (50.82%), Postives = 81/122 (66.39%), Query Frame = 0


Query: 132 NQKASKKTKPDATCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHE 191
           +Q A+K+ K +A   +   KRKEK+G+RI ALQQLVSPFGKTD ASVL EA+ YIKFLH+
Sbjct: 326 HQPAAKRAKSEAASPSPAFKRKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQ 385

Query: 192 QVQVLCSPYLQKSQLLSSQSTSGRENGEI--EGDLKSRGLCLIPVDCSLHLADCTVADFW 251
           QV  L +PY++    L  Q +      E+  E DL+SRGLCL+PV  +  +   T  DFW
Sbjct: 386 QVSALSNPYMKSGASLQHQQSDHSTELEVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFW 445

[Close]

BLAST of ClCG02G006520 vs. ExPASy Swiss-Prot
Match: Q94JL3 (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-22
Identity = 63/127 (49.61%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 132 NQKASKKTKPDATCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLH 191
           N+ A+KK +          K RKE L ++IT+LQQLVSPFGKTDTASVL EA+ YIKFLH
Sbjct: 261 NESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLH 320

Query: 192 EQVQVLCSPYL------QKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCSLHLADCT 251
           +QV VL +PY+      Q+ Q +S +S S  EN   E  L+  GLCL+P+  +  +A+ T
Sbjct: 321 DQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHE--LRGHGLCLVPISSTFPVANET 380

[Close]

BLAST of ClCG02G006520 vs. ExPASy Swiss-Prot
Match: Q7XJU2 (Transcription factor bHLH153 OS=Arabidopsis thaliana OX=3702 GN=BHLH153 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.5e-21
Identity = 56/121 (46.28%), Postives = 83/121 (68.60%), Query Frame = 0


Query: 131 LNQKASKKTKPDATCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLH 190
           L + + K+ K D + S+   +RK+K+GERI+ALQQ+VSP+GKTDTASVL +AM YI+FLH
Sbjct: 20  LGESSIKRHKSDLSFSS--KERKDKVGERISALQQIVSPYGKTDTASVLLDAMHYIEFLH 79

Query: 191 EQVQVLCSPYLQKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCSLHLADCTVADFWS 250
           EQV+VL +PYLQ     + +          +  L++RGLCL+P++ ++ +A    AD W+
Sbjct: 80  EQVKVLSAPYLQTVPDATQEELE-------QYSLRNRGLCLVPMENTVGVAQSNGADIWA 131

Query: 251 P 252
           P
Sbjct: 140 P 131

[Close]

BLAST of ClCG02G006520 vs. ExPASy Swiss-Prot
Match: Q9SFZ3 (Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 5.5e-19
Identity = 84/247 (34.01%), Postives = 122/247 (49.39%), Query Frame = 0


Query: 2   AEKQSFTRDHPGPTTATSFSQLLFSSQHDDDDNDDIDKNHHLHHQIFDYSVSSASSPFAI 61
           + + +F++ +P    + + S L  S +   DD  +I +   ++ Q+FD  +   +     
Sbjct: 192 SHRGNFSQIYP----SVNISSLSESRKMSMDDMSNISRPFDINMQVFDGRLFEGNVLVPP 251

Query: 62  DNPPKMLCFGSKEEDEEHPQLGFKSHQRSGHACSDSSSTSSGNGLKSDSKLKRRNGSNPE 121
            N  ++   G          L F  H +       SS T       ++ +       N  
Sbjct: 252 FNAQEISSLGMSRGSLPSFGLPFHHHLQQTLPHLSSSPTHQMEMFSNEPQTSEGKRHNFL 311

Query: 122 MSVIKEAPLLNQKASKKTKPDATCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLH 181
           M     A    + ASKK + ++  S    K RKEKLG+RI ALQQLVSPFGKTDTASVL 
Sbjct: 312 M-----ATKAGENASKKPRVESRSSCPPFKVRKEKLGDRIAALQQLVSPFGKTDTASVLM 371

Query: 182 EAMGYIKFLHEQVQVLCSPYLQ-------KSQLLSSQSTSGRENGEIEGDLKSRGLCLIP 241
           EA+GYIKFL  Q++ L  PY++       K+  L SQS  G E  E   DL+SRGLCL+P
Sbjct: 372 EAIGYIKFLQSQIETLSVPYMRASRNRPGKASQLVSQSQEGDE--EETRDLRSRGLCLVP 427

[Close]

BLAST of ClCG02G006520 vs. ExPASy TrEMBL
Match: A0A1S3BZZ3 (transcription factor bHLH113 OS=Cucumis melo OX=3656 GN=LOC103495283 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.5e-112
Identity = 214/258 (82.95%), Postives = 230/258 (89.15%), Query Frame = 0


Query: 1   MAEKQSFTRDHPGPTTATSFSQLLFSSQHDDDDNDDIDKNHHLHHQIFDYSVSSASSPFA 60
           MAE QSF  DH  PTTAT+FSQLLFS  HDDDD++D+D + + HHQIFDYSVSS+SS FA
Sbjct: 1   MAENQSFAGDHLRPTTATTFSQLLFSPHHDDDDDNDVDVDKN-HHQIFDYSVSSSSSSFA 60

Query: 61  IDNPPKMLCFGSKEEDEEHPQLGFKSHQRSGHACSDSSSTSSGNGLKSDSKLKRRNGSNP 120
           IDNPPKMLCFG+KEED+EHPQLGFKS QRS HACSDSSS SSGNGLK + KLKRRNGSNP
Sbjct: 61  IDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGSNP 120

Query: 121 EMSVIKEAPLLNQKASKKTKPDATCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180
           E + IKE       ASKKTKP+A CSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH
Sbjct: 121 ETAAIKE-------ASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180

Query: 181 EAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCSLHL 240
           EAMGYIKFLHEQVQVLCSPYLQKSQLLSSQS +G+ENGE EGDLKSRGLCLIPVDCSLHL
Sbjct: 181 EAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSATGKENGETEGDLKSRGLCLIPVDCSLHL 240

Query: 241 ADCTVADFWSPAMAMGRK 259
           A+CTVADFWSPAMAMG+K
Sbjct: 241 ANCTVADFWSPAMAMGKK 250

[Close]

BLAST of ClCG02G006520 vs. ExPASy TrEMBL
Match: A0A0A0K7T3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071650 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.1e-110
Identity = 215/260 (82.69%), Postives = 229/260 (88.08%), Query Frame = 0


Query: 1   MAEKQSFTRDHPGPTTATSFSQLLFSSQHDDDDNDDIDKN-HHLHHQIFDYSV-SSASSP 60
           MAE QSFT DH  PTTAT+FSQLLFS  HDDDD++D+D +    HHQIFDYSV SS+SS 
Sbjct: 1   MAENQSFTGDHLRPTTATTFSQLLFSPHHDDDDDNDVDVDVDQNHHQIFDYSVSSSSSSS 60

Query: 61  FAIDNPPKMLCFGSKEEDEEHPQLGFKSHQRSGHACSDSSSTSSGNGLKSDSKLKRRNGS 120
           FAIDNPPKMLCFG+KEED+EHPQLGFKS QRS HACSDSSS SSGNGLK + KLKRRNGS
Sbjct: 61  FAIDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGS 120

Query: 121 NPEMSVIKEAPLLNQKASKKTKPDATCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180
           NPEM+ IKE       ASKKTKP+A CSAGHAKRKEKLGERITALQQLVSPFGKTDTASV
Sbjct: 121 NPEMAAIKE-------ASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180

Query: 181 LHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCSL 240
           LHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQS +GR N E EGDLKSRGLCLIPVDCSL
Sbjct: 181 LHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSATGRGNEETEGDLKSRGLCLIPVDCSL 240

Query: 241 HLADCTVADFWSPAMAMGRK 259
           HLA+CTVADFWSPAMAMG+K
Sbjct: 241 HLANCTVADFWSPAMAMGKK 253

[Close]

BLAST of ClCG02G006520 vs. ExPASy TrEMBL
Match: A0A6J1I8M4 (transcription factor bHLH113 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470999 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.8e-93
Identity = 187/261 (71.65%), Postives = 211/261 (80.84%), Query Frame = 0


Query: 1   MAEKQSFTRDHPGPTTATSFSQLLFSSQHDDDDNDDIDKNHHLHHQIFDYSVSSASSPFA 60
           MAE QS  RD P    AT+FSQLLFS+ HD+ D  D+DK+HH+HHQIF+YSVSS+   FA
Sbjct: 112 MAENQSSGRD-PKTAAATTFSQLLFSADHDEYDEIDVDKHHHVHHQIFEYSVSSS---FA 171

Query: 61  IDNPPKMLCFGSKEEDEEHPQLGFKSHQRSGHACSDSSSTSSGNGLKSDSKLKRRNGSNP 120
           I+NPPKMLCFG+K+E +EHPQLG     RS HACSDS              +KR+NGSNP
Sbjct: 172 IENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGSNP 231

Query: 121 EMSVIKEAPLLNQKASKKTKPDATCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180
           E + IK APL NQKASKKTKP+A CSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH
Sbjct: 232 ETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 291

Query: 181 EAMGYIKFLHEQVQVLCSPYLQKSQLLSS--QSTSGRENGEIEGDLKSRGLCLIPVDCSL 240
           EAMGYIKFLHEQ+QVL SPYL K+QL+S+  Q T GR NGE EG++K RGLCLIPV+CSL
Sbjct: 292 EAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKTEGRGNGETEGEMKGRGLCLIPVECSL 349

Query: 241 HLADCTVADFWSPAMAMGRKL 260
           HLA+CTVADFWSPAMAMGRKL
Sbjct: 352 HLANCTVADFWSPAMAMGRKL 349

[Close]

BLAST of ClCG02G006520 vs. ExPASy TrEMBL
Match: A0A6J1GL82 (transcription factor bHLH113 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455286 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 9.5e-91
Identity = 184/259 (71.04%), Postives = 207/259 (79.92%), Query Frame = 0


Query: 1   MAEKQSFTRDHPGPTTATSFSQLLFSSQHDDDDNDDIDKNHHLHHQIFDYSVSSASSPFA 60
           MAE QS  RD P    AT+FSQLLFS+ HD+DD+ D+DK+HH+HHQIF+YSVSS+   FA
Sbjct: 1   MAENQSSGRD-PKTAAATTFSQLLFSANHDEDDDIDVDKHHHVHHQIFEYSVSSS---FA 60

Query: 61  IDNPPKMLCFGSKEEDEEHPQLGFKSHQRSGHACSDSSSTSSGNGLKSDSKLKRRNGSNP 120
           I+NPPKMLCFG+K+E +EHPQLG     RS HACSDS              +KR+NGSNP
Sbjct: 61  IENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGSNP 120

Query: 121 EMSVIKEAPLLNQKASKKTKPDATCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180
           E + IK APL NQKASKKTKP+A CSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH
Sbjct: 121 ETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180

Query: 181 EAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCSLHL 240
           EAMGYIKFLHEQ+QVL SPYL K+QL       G  NG+ EG+LK RGLCLIPV+CSLHL
Sbjct: 181 EAMGYIKFLHEQIQVLYSPYLDKNQL-------GGGNGDTEGELKGRGLCLIPVECSLHL 229

Query: 241 ADCTVADFWSPAMAMGRKL 260
           A+CTVADFWSPAMAMGRKL
Sbjct: 241 ANCTVADFWSPAMAMGRKL 229

[Close]

BLAST of ClCG02G006520 vs. ExPASy TrEMBL
Match: A0A6J1IBJ7 (transcription factor bHLH113 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470999 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.6e-90
Identity = 184/259 (71.04%), Postives = 206/259 (79.54%), Query Frame = 0


Query: 1   MAEKQSFTRDHPGPTTATSFSQLLFSSQHDDDDNDDIDKNHHLHHQIFDYSVSSASSPFA 60
           MAE QS  RD P    AT+FSQLLFS+ HD+ D  D+DK+HH+HHQIF+YSVSS+   FA
Sbjct: 112 MAENQSSGRD-PKTAAATTFSQLLFSADHDEYDEIDVDKHHHVHHQIFEYSVSSS---FA 171

Query: 61  IDNPPKMLCFGSKEEDEEHPQLGFKSHQRSGHACSDSSSTSSGNGLKSDSKLKRRNGSNP 120
           I+NPPKMLCFG+K+E +EHPQLG     RS HACSDS              +KR+NGSNP
Sbjct: 172 IENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGSNP 231

Query: 121 EMSVIKEAPLLNQKASKKTKPDATCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 180
           E + IK APL NQKASKKTKP+A CSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH
Sbjct: 232 ETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLH 291

Query: 181 EAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCSLHL 240
           EAMGYIKFLHEQ+QVL SPYL K+QL       GR NGE EG++K RGLCLIPV+CSLHL
Sbjct: 292 EAMGYIKFLHEQIQVLYSPYLDKNQL-------GRGNGETEGEMKGRGLCLIPVECSLHL 340

Query: 241 ADCTVADFWSPAMAMGRKL 260
           A+CTVADFWSPAMAMGRKL
Sbjct: 352 ANCTVADFWSPAMAMGRKL 340

[Close]

BLAST of ClCG02G006520 vs. TAIR 10
Match: AT3G19500.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 9.2e-30
Identity = 103/254 (40.55%), Postives = 127/254 (50.00%), Query Frame = 0


Query: 18  TSFSQLLFSSQHDDDDNDDIDKNHHLHHQIFDYSVSSASSPFAIDNPPKMLCF-GSKEED 77
           TSFS+LL  S      + D    H     + D    S    F+     +MLCF G  + D
Sbjct: 20  TSFSELLMFSDGVLSSSSD----HQPEGNVGDGGEDSLGFVFSGKTGSRMLCFSGGYQND 79

Query: 78  EEH-------PQLGFK---------SHQRSGHACSDSSSTSSGNGLKSDSKLKRRNGSNP 137
           +E        P  G             + S  AC+   ST      KS +K +   G+  
Sbjct: 80  DESLFLEPSVPTSGVSDLDPSCIKIDCRNSNDACTVDKST------KSSTKKRTGTGNGQ 139

Query: 138 EMSVIKEAPLLNQKASKKTKPD-ATCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASV 197
           E          N+K  KK K +    S G AK RKE+LGERI ALQQLVSP+GKTD ASV
Sbjct: 140 ESD-------QNRKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASV 199

Query: 198 LHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCSL 253
           LHEAMGYIKFL +Q+QVLCSPYL    L     T          DL+SRGLCL+PV  ++
Sbjct: 200 LHEAMGYIKFLQDQIQVLCSPYLINHSLDGGVVTGDVMAAMKAKDLRSRGLCLVPVSSTV 256

[Close]

BLAST of ClCG02G006520 vs. TAIR 10
Match: AT3G20640.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 3.3e-27
Identity = 62/122 (50.82%), Postives = 81/122 (66.39%), Query Frame = 0


Query: 132 NQKASKKTKPDATCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHE 191
           +Q A+K+ K +A   +   KRKEK+G+RI ALQQLVSPFGKTD ASVL EA+ YIKFLH+
Sbjct: 326 HQPAAKRAKSEAASPSPAFKRKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQ 385

Query: 192 QVQVLCSPYLQKSQLLSSQSTSGRENGEI--EGDLKSRGLCLIPVDCSLHLADCTVADFW 251
           QV  L +PY++    L  Q +      E+  E DL+SRGLCL+PV  +  +   T  DFW
Sbjct: 386 QVSALSNPYMKSGASLQHQQSDHSTELEVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFW 445

[Close]

BLAST of ClCG02G006520 vs. TAIR 10
Match: AT1G61660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 7.6e-24
Identity = 63/127 (49.61%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 132 NQKASKKTKPDATCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLH 191
           N+ A+KK +          K RKE L ++IT+LQQLVSPFGKTDTASVL EA+ YIKFLH
Sbjct: 261 NESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLH 320

Query: 192 EQVQVLCSPYL------QKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCSLHLADCT 251
           +QV VL +PY+      Q+ Q +S +S S  EN   E  L+  GLCL+P+  +  +A+ T
Sbjct: 321 DQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHE--LRGHGLCLVPISSTFPVANET 380

[Close]

BLAST of ClCG02G006520 vs. TAIR 10
Match: AT1G49830.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 7.6e-24
Identity = 74/199 (37.19%), Postives = 113/199 (56.78%), Query Frame = 0


Query: 59  FAIDNPPKMLCFGSKEEDEEHPQLGFKSHQRSGHACS-DSSSTSSGNGLKSDSKLKRRNG 118
           F  ++ P+MLCFG   +++        S   +    S +++   +    +S+ K    +G
Sbjct: 39  FTGNDAPQMLCFGGGNQNDTDLLFSQPSFSPASPLSSRNNACVVNDQSFRSNKKTGSADG 98

Query: 119 SNPEMSVIKEAPLLNQKASKKTKPD-ATCSAGHAK-RKEKLGERITALQQLVSPFGKTDT 178
            +          + + K  K+ K D    S G+AK +KEK+GE+IT LQ LVSP+GKTD 
Sbjct: 99  HD---------RVCDPKPGKRCKRDQKKSSLGNAKVKKEKVGEKITTLQHLVSPYGKTDA 158

Query: 179 ASVLHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSTSGRENGEIE-GDLKSRGLCLIPV 238
           ASVLHE MGYIKFL +QVQVL +PY + + L      +G  N  ++  +L+S GLCL+P+
Sbjct: 159 ASVLHETMGYIKFLQDQVQVLSTPYFKHNPL--DDEDTGEVNPTMKVKELRSNGLCLVPL 218

Query: 239 DCSLHLADCTVADFWSPAM 254
             ++H+A+   AD WS A+
Sbjct: 219 AWTVHVANTNGADLWSSAI 226

[Close]

BLAST of ClCG02G006520 vs. TAIR 10
Match: AT1G61660.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 4.1e-22
Identity = 73/184 (39.67%), Postives = 106/184 (57.61%), Query Frame = 0


Query: 84  FKSHQRSGHACSDSSSTSSGNGLKSD---------SKLKRRNGSNPEMSVIKEAPLLNQK 143
           F ++  S    + SS+T+  N   S+         ++L+ +  +  +   +K A   N+ 
Sbjct: 202 FSNNANSRPFWNSSSTTNLNNTTPSNFVTTPQIISTRLEDKTKTRAQSESLKRAK-DNES 261

Query: 144 ASKKTKPDATCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQV 203
           A+KK +          K RKE L ++IT+LQQLVSPFGKTDTASVL EA+ YIKFLH+QV
Sbjct: 262 AAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQV 321

Query: 204 QVLCSPYL------QKSQLLSSQSTSGRENGEIEGDLKSRGLCLIPVDCSLHLADCTVAD 252
            VL +PY+      Q+ Q +S +S S  EN   E  L+  GLCL+P+  +  +A+ T AD
Sbjct: 322 TVLSTPYMKQGASNQQQQQISGKSKSQDENENHE--LRGHGLCLVPISSTFPVANETTAD 381

The following BLAST results are available for this feature:

BLAST of ClCG02G006520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888642.1	3.5e-124	88.93	transcription factor bHLH113-like [Benincasa hispida]	[more]
XP_008455002.1	3.1e-112	82.95	PREDICTED: transcription factor bHLH113 [Cucumis melo]	[more]
XP_004137092.1	2.2e-110	82.69	transcription factor bHLH113 [Cucumis sativus] >KGN43876.1 hypothetical protein ...	[more]
XP_022972440.1	1.6e-92	71.65	transcription factor bHLH113 isoform X2 [Cucurbita maxima]	[more]
XP_022952658.1	2.0e-90	71.04	transcription factor bHLH113 isoform X2 [Cucurbita moschata]	[more]

BLAST of ClCG02G006520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT67	1.3e-28	40.55	Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=...	[more]
Q8GXT3	4.6e-26	50.82	Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=...	[more]
Q94JL3	1.1e-22	49.61	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]
Q7XJU2	4.5e-21	46.28	Transcription factor bHLH153 OS=Arabidopsis thaliana OX=3702 GN=BHLH153 PE=1 SV=...	[more]
Q9SFZ3	5.5e-19	34.01	Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=...	[more]

BLAST of ClCG02G006520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZZ3	1.5e-112	82.95	transcription factor bHLH113 OS=Cucumis melo OX=3656 GN=LOC103495283 PE=4 SV=1	[more]
A0A0A0K7T3	1.1e-110	82.69	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071650 PE=4 S...	[more]
A0A6J1I8M4	7.8e-93	71.65	transcription factor bHLH113 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470...	[more]
A0A6J1GL82	9.5e-91	71.04	transcription factor bHLH113 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1IBJ7	1.6e-90	71.04	transcription factor bHLH113 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470...	[more]

BLAST of ClCG02G006520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19500.1	9.2e-30	40.55	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G20640.1	3.3e-27	50.82	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.1	7.6e-24	49.61	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G49830.1	7.6e-24	37.19	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.3	4.1e-22	39.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 147..212 e-value: 2.2E-6 score: 29.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 151..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..27
None	No IPR available	PANTHER	PTHR16223:SF238	TRANSCRIPTION FACTOR BHLH114	coord: 29..243
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 29..243
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 151..196 e-value: 3.08638E-22 score: 84.5403
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 140..189 score: 10.835831

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G006520.2	ClCG02G006520.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding