ClCG02G005510 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG02G005510
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptiondiphthamide biosynthesis protein 3-like
LocationCG_Chr02: 6026966 .. 6029640 (+)
RNA-Seq ExpressionClCG02G005510
SyntenyClCG02G005510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTACGACGACGTAGAGATTGAAGACATGGAGTGGAACGAGGAACTGCAGGCCTTCACATACCCATGCCCCTGCGGCGACTTGTTCCAGATCACCAAGGAGGATCTTAAGCTCGGCGAAGAGATTGCTCGGTGCCCTAGCTGCTCTCTTTACATCACGGTCATCTACAACATGGAAGATTTTCTTGGAGACTCTAATCAGAAGAATAACAAAGGAATTGAGCCCCCTAAACAACAGCCTATCGTGGTCGCTTAACAATTCAGGTTATTAACCGATCGAAACTTCGAATTTGTTTATTATCACCGGAATGTTCGTATGCAATCATTTTTTTCCTTTTTTTTTTTGTTTTTTTTAACATGCTCTCGTTAGTTCCTTTTAGGTTACCTTGTTCCTACTTCCGTATTTACTATTCGCTGTGTGGATGGGAGAACAGTGGAGTCTGAATCTGGAATTTATTTGAATTTGGAATATCTTGCTTCCCCTCCATCCCTCAGGGGGATGGTTTCACTTCGTTAGTTATATAGCTTAGTTTCATATACGTAAGCAGTTTAGAACCCTGGGTAGGCCTAGCTTTAGCGTGATAAAATGTCCAATTGGGTTGTTTCCTCTTCCCTGTGATAAATTGTTCAGAGATAAGTTTGTGAAACTGAATACTCTTTCTGAAAGCATTAAGCTATTGTGTTTGTTTGTGCTCATCAAGTTTTAAAGGATTTACTATGTAAAGAAATCTTTTTGGTCATTGTTGATACACCATATTTAAGGCTTCAGTCTTTTACTCTCGGGTAAACTTCTCTGACTAGAAGGTAGAAAGATGAAGTAGCTCTGATTGAATCTAAACTGCACACAATAATATATGGTTAAATTATAAATTTGGTCCCTTGGAGAAAGTTAAAATTTAGTCCGTTTTAAAAGTTAAATTTTGGTCCTAGTGGTTTGCTCATAAATGGTCGTATGGTTTGATAACATACTCATAAATAATCCTTAGGGTAAGGACTACTATTTACGAAAGTTTTATCAAGAGGACTAAATTTTAACCTTCTCTAAATTTATAGGGACCAAATTTGCAATTTAACCTATATTTTATCCTAGAAGCGTGTTTAGTTTGTGGCCAATTGAGAACGGAGTAGACTCATTTGGATTGAGAGAAGAGAATAAGTTGCTATACCATACCCGTTAGGAGGAGGATTTCAATTGGTTAGTTCATTACGCCAGGGAGACCCTAGCTTTAGTGCAGAACTCTCTATTACCCCGTTCGAGATTAGCTAGAGAATGCTTATGCTGACGTGGATAACCTGCAACTATGTTCTTTTTTATGTTGTCTGCTGTATCATTTTTCTGAAGTTATGATTATATATGGAAAGGGTAGCCCTATGGACTACGTCCCTGCCCAACTGCCCAAACTCAAAAAAGGAAAAAAAGGATTGGTCATTGGGAAGCTCTGGCAGTTCGTTGAACATTTTTTCTTTTGGTAATTTGAATTTACCTCTATTTTCTGGGTTGTTTAGAGATGATTTCATGAATATGTATGTGAGTAATACACAGTTATGCTTGTTTTTGTCCGTCTAAGGGTATACCTTCTGAGGTCATCGTTTTGGTCATTGCTCATATACTGTATTTATATGCTTATTTTCTAACCAGAAAACTGTATTTTATTTATAGGTTTGTATTTTTTCATTCAAGTGAACTTCTCTGACTTTAAGATAGGAAAATAGAGGAAGTAGCTCTGTTTGAATCTAGACCCCACACCAGAATGTATCTAAATCTCCTCTGAGTTCTTGGTGTTTAGTTTGTGATTTGACTCTATTTCAATAGGGGGAATGACCTTGATAAAGGGTAAGAGGTCTCATGGGTTCAATTCATGGTGACCACTTATCTATCTAGTTTTCTTGACACCTAAATGTTGTAAAGTCAAGTGAGTTGCCACGAAAAAGAAGGTGGAATTTGTCATCAGTACAAGTCTCTTTTAACTTTGTGGCATAAGTGTGTTATATGGCACATGGATTCTCTAAACTCTATCAATACATGGTTGGAATAGTCTTTTAATATCTTTAGTTTCTCCTTCAAAAATAAAAAAATAAAAAAGATCTTCTATTTTGTTAGTTTTATATAGATGTTCCTTTTTGCAGAACCCCCAAATGTGAATCATGGTGTCACCACGGCAGCTGCACTTGTTGCAGATGAAATTTTGTCAGCCATTGTCAATTCTGAGATGTTCGTTGGCATTAAAGTTTCTTCCTTTTCTTTTCATTTCTTTTTTCAGAATTGCTCTTGGAAATAGAGGAAGGTAGAGTTGCTTCCGGAAAAATGTAGTGAAGTACTATTTTTGTTCCTTGATGAAGTAATTTATAGAATCTTGATCTTTTCACAATCTAATGTAATGAGTGGTGATTTCTTTGGTCGAATCTATCTTCGTCTTTATGACATAAAATGGATGAAAACCTCTACTAATCTAATCAATCTATGCTTTTTTTTTTCTTTTACAAACACTTTTTTAAACATTTATAAAGTAAATCCAAACATGTTCTTAATCAGTTGCTGATTTTCAGCTCTTCTCGTTGGTTTATGGAAATTTCAGGATAATGATTTGTTTTATTGACCCTTTTGCATATTAGGTTGATTGTATTATGGATCGGGAAATGGTGAAACCCATTTTGCAAATGCTTATTAGCTAG

mRNA sequence

ATGTCGTACGACGACGTAGAGATTGAAGACATGGAGTGGAACGAGGAACTGCAGGCCTTCACATACCCATGCCCCTGCGGCGACTTGTTCCAGATCACCAAGGAGGATCTTAAGCTCGGCGAAGAGATTGCTCGGTGCCCTAGCTGCTCTCTTTACATCACGGTCATCTACAACATGGAAGATTTTCTTGGAGACTCTAATCAGAAGAATAACAAAGGAATTGAGCCCCCTAAACAACAGCCTATCGTGGGAGACCCTAGCTTTAGTGCAGAACTCTCTATTACCCCGGTAGCCCTATGGACTACGTCCCTGCCCAACTGCCCAAACTCAAAAAAGGAAAAAAAGGATTGGTCATTGGGAAGCTCTGGCAGTTCGTTGAACATTTTTTCTTTTGGTAATTTGAATTTACCTCTATTTTCTGGGTTGTTTAGAGATGATTTCATGAATATGTTTGTATTTTTTCATTCAAAACCCCCAAATGTGAATCATGGTGTCACCACGGCAGCTGCACTTGTTGCAGATGAAATTTTGTCAGCCATTGTCAATTCTGAGATGTTCGTTGGCATTAAAGTTGATTGTATTATGGATCGGGAAATGGTGAAACCCATTTTGCAAATGCTTATTAGCTAG

Coding sequence (CDS)

ATGTCGTACGACGACGTAGAGATTGAAGACATGGAGTGGAACGAGGAACTGCAGGCCTTCACATACCCATGCCCCTGCGGCGACTTGTTCCAGATCACCAAGGAGGATCTTAAGCTCGGCGAAGAGATTGCTCGGTGCCCTAGCTGCTCTCTTTACATCACGGTCATCTACAACATGGAAGATTTTCTTGGAGACTCTAATCAGAAGAATAACAAAGGAATTGAGCCCCCTAAACAACAGCCTATCGTGGGAGACCCTAGCTTTAGTGCAGAACTCTCTATTACCCCGGTAGCCCTATGGACTACGTCCCTGCCCAACTGCCCAAACTCAAAAAAGGAAAAAAAGGATTGGTCATTGGGAAGCTCTGGCAGTTCGTTGAACATTTTTTCTTTTGGTAATTTGAATTTACCTCTATTTTCTGGGTTGTTTAGAGATGATTTCATGAATATGTTTGTATTTTTTCATTCAAAACCCCCAAATGTGAATCATGGTGTCACCACGGCAGCTGCACTTGTTGCAGATGAAATTTTGTCAGCCATTGTCAATTCTGAGATGTTCGTTGGCATTAAAGTTGATTGTATTATGGATCGGGAAATGGTGAAACCCATTTTGCAAATGCTTATTAGCTAG

Protein sequence

MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDFLGDSNQKNNKGIEPPKQQPIVGDPSFSAELSITPVALWTTSLPNCPNSKKEKKDWSLGSSGSSLNIFSFGNLNLPLFSGLFRDDFMNMFVFFHSKPPNVNHGVTTAAALVADEILSAIVNSEMFVGIKVDCIMDREMVKPILQMLIS
Homology
[Close]
BLAST of ClCG02G005510 vs. NCBI nr
Match: XP_038887330.1 (diphthamide biosynthesis protein 3-like [Benincasa hispida] >XP_038887331.1 diphthamide biosynthesis protein 3-like [Benincasa hispida])

HSP 1 Score: 178.3 bits (451), Expect = 6.7e-41
Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFLGDSNQKNNKG+EP KQQPIV
Sbjct: 61 DFLGDSNQKNNKGLEPSKQQPIV 83

[Close]
BLAST of ClCG02G005510 vs. NCBI nr
Match: XP_022972367.1 (diphthamide biosynthesis protein 3-like [Cucurbita maxima])

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-39
Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFLGDS+ KNNKG++P KQQPIV
Sbjct: 61 DFLGDSDHKNNKGLQPSKQQPIV 83

[Close]
BLAST of ClCG02G005510 vs. NCBI nr
Match: XP_008454889.1 (PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo] >XP_008454890.1 PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo] >KAA0031262.1 diphthamide biosynthesis protein 3-like [Cucumis melo var. makuwa] >TYK06714.1 diphthamide biosynthesis protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 172.6 bits (436), Expect = 3.7e-39
Identity = 78/83 (93.98%), Postives = 80/83 (96.39%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDM+WNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMDWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFL DSNQKNNKG+EP KQ PIV
Sbjct: 61 DFLDDSNQKNNKGLEPSKQHPIV 83

[Close]
BLAST of ClCG02G005510 vs. NCBI nr
Match: XP_022136247.1 (diphthamide biosynthesis protein 3-like [Momordica charantia])

HSP 1 Score: 172.6 bits (436), Expect = 3.7e-39
Identity = 77/83 (92.77%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNQELQAYTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFLGDS+QKNNKGI+P KQQPIV
Sbjct: 61 DFLGDSDQKNNKGIQPSKQQPIV 83

[Close]
BLAST of ClCG02G005510 vs. NCBI nr
Match: XP_004137002.1 (diphthamide biosynthesis protein 3 [Cucumis sativus] >KGN43974.1 hypothetical protein Csa_017712 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 2.4e-38
Identity = 77/83 (92.77%), Postives = 79/83 (95.18%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFL  SNQKNNKG+EP KQ PIV
Sbjct: 61 DFLDHSNQKNNKGLEPSKQHPIV 83

[Close]
BLAST of ClCG02G005510 vs. ExPASy Swiss-Prot
Match: Q21102 (DPH3 homolog OS=Caenorhabditis elegans OX=6239 GN=K01H12.1 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.4e-17
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 0 

Query: 3  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          +D+VEIED E++EE   + YPCPCGD F+I +E L++GE++A+CPSCSL I VIY+ EDF
Sbjct: 5  HDEVEIEDFEFDEEKDVYHYPCPCGDRFEIPREMLEMGEDVAQCPSCSLLIRVIYDPEDF 64

Query: 63 LGDSNQKNNKGIEPP 78
          +       +K I  P
Sbjct: 65 VKLETISTSKPIAEP 79

[Close]
BLAST of ClCG02G005510 vs. ExPASy Swiss-Prot
Match: Q74Z32 (Diphthamide biosynthesis protein 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DPH3 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.1e-17
Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 0 

Query: 3  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          YD+VEIEDM ++ + Q FTYPCPCGD FQI+ +D+  GE+IA CPSCSL I V+Y + D 
Sbjct: 4  YDEVEIEDMTFDPDTQLFTYPCPCGDRFQISIDDMCDGEDIAVCPSCSLMIKVVYELHDL 63

Query: 63 LGDSNQKNNKGIEPP 78
                 +  G+EPP
Sbjct: 64 ---QEYYDEAGVEPP 75

[Close]
BLAST of ClCG02G005510 vs. ExPASy Swiss-Prot
Match: Q9VGQ9 (DPH3 homolog OS=Drosophila melanogaster OX=7227 GN=CG14701 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.1e-17
Identity = 38/68 (55.88%), Postives = 53/68 (77.94%), Query Frame = 0 

Query: 3  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          +D+VEIED E++EE + + YPCPCGD FQI+KE+L  GEE+A CPSCSL I VIY+ E F
Sbjct: 5  HDEVEIEDFEYDEEEEMYYYPCPCGDRFQISKEELIEGEEVATCPSCSLVIKVIYDPEMF 64

Query: 63 LGDSNQKN 71
            + ++++
Sbjct: 65 KAEEDEES 72

[Close]
BLAST of ClCG02G005510 vs. ExPASy Swiss-Prot
Match: Q6VUC1 (DPH3 homolog OS=Cricetulus griseus OX=10029 GN=DPH3 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.0e-17
Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 0 

Query: 3  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          +D+VEIED +++E+ + + YPCPCGD F ITKEDL+ GE++A CPSCSL I VIY+ + F
Sbjct: 5  HDEVEIEDFQYDEDSETYFYPCPCGDNFSITKEDLENGEDVATCPSCSLIIKVIYDKDQF 64

Query: 63 L 64
          +
Sbjct: 65 M 65

[Close]
BLAST of ClCG02G005510 vs. ExPASy Swiss-Prot
Match: Q96FX2 (DPH3 homolog OS=Homo sapiens OX=9606 GN=DPH3 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.2e-17
Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 0 

Query: 3  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          +D+VEIED +++E+ + + YPCPCGD F ITKEDL+ GE++A CPSCSL I VIY+ + F
Sbjct: 5  HDEVEIEDFQYDEDSETYFYPCPCGDNFSITKEDLENGEDVATCPSCSLIIKVIYDKDQF 64

Query: 63 L 64
          +
Sbjct: 65 V 65

[Close]
BLAST of ClCG02G005510 vs. ExPASy TrEMBL
Match: A0A6J1I4L9 (diphthamide biosynthesis protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111470942 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFLGDS+ KNNKG++P KQQPIV
Sbjct: 61 DFLGDSDHKNNKGLQPSKQQPIV 83

[Close]
BLAST of ClCG02G005510 vs. ExPASy TrEMBL
Match: A0A1S3BZL5 (diphthamide biosynthesis protein 3-like OS=Cucumis melo OX=3656 GN=LOC103495198 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.8e-39
Identity = 78/83 (93.98%), Postives = 80/83 (96.39%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDM+WNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMDWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFL DSNQKNNKG+EP KQ PIV
Sbjct: 61 DFLDDSNQKNNKGLEPSKQHPIV 83

[Close]
BLAST of ClCG02G005510 vs. ExPASy TrEMBL
Match: A0A5A7SJN1 (Diphthamide biosynthesis protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00150 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.8e-39
Identity = 78/83 (93.98%), Postives = 80/83 (96.39%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDM+WNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMDWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFL DSNQKNNKG+EP KQ PIV
Sbjct: 61 DFLDDSNQKNNKGLEPSKQHPIV 83

[Close]
BLAST of ClCG02G005510 vs. ExPASy TrEMBL
Match: A0A6J1C519 (diphthamide biosynthesis protein 3-like OS=Momordica charantia OX=3673 GN=LOC111007992 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.8e-39
Identity = 77/83 (92.77%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNQELQAYTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFLGDS+QKNNKGI+P KQQPIV
Sbjct: 61 DFLGDSDQKNNKGIQPSKQQPIV 83

[Close]
BLAST of ClCG02G005510 vs. ExPASy TrEMBL
Match: A0A0A0K4W9 (DPH-type MB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G075060 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38
Identity = 77/83 (92.77%), Postives = 79/83 (95.18%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFL  SNQKNNKG+EP KQ PIV
Sbjct: 61 DFLDHSNQKNNKGLEPSKQHPIV 83

[Close]
BLAST of ClCG02G005510 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-33
Identity = 65/82 (79.27%), Postives = 72/82 (87.80%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEE+QA+TYPCPCGDLFQITKEDL+LGEEIA CPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEEIQAYTYPCPCGDLFQITKEDLRLGEEIANCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPI 83
          DF  D+ +KNN   EP  + P+
Sbjct: 61 DFQNDT-KKNN---EPKTRHPV 78

[Close]
BLAST of ClCG02G005510 vs. TAIR 10
Match: AT2G15910.2 (CSL zinc finger domain-containing protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-33
Identity = 65/82 (79.27%), Postives = 72/82 (87.80%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEE+QA+TYPCPCGDLFQITKEDL+LGEEIA CPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEEIQAYTYPCPCGDLFQITKEDLRLGEEIANCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPI 83
          DF  D+ +KNN   EP  + P+
Sbjct: 61 DFQNDT-KKNN---EPKTRHPV 78

The following BLAST results are available for this feature:
BLAST of ClCG02G005510 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038887330.16.7e-4197.59diphthamide biosynthesis protein 3-like [Benincasa hispida] >XP_038887331.1 diph... [more]
XP_022972367.12.2e-3993.98diphthamide biosynthesis protein 3-like [Cucurbita maxima][more]
XP_008454889.13.7e-3993.98PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo] >XP_008454890.... [more]
XP_022136247.13.7e-3992.77diphthamide biosynthesis protein 3-like [Momordica charantia][more]
XP_004137002.12.4e-3892.77diphthamide biosynthesis protein 3 [Cucumis sativus] >KGN43974.1 hypothetical pr... [more]
BLAST of ClCG02G005510 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q211022.4e-1752.00DPH3 homolog OS=Caenorhabditis elegans OX=6239 GN=K01H12.1 PE=3 SV=1[more]
Q74Z324.1e-1753.33Diphthamide biosynthesis protein 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 1... [more]
Q9VGQ94.1e-1755.88DPH3 homolog OS=Drosophila melanogaster OX=7227 GN=CG14701 PE=3 SV=1[more]
Q6VUC17.0e-1757.38DPH3 homolog OS=Cricetulus griseus OX=10029 GN=DPH3 PE=3 SV=1[more]
Q96FX29.2e-1757.38DPH3 homolog OS=Homo sapiens OX=9606 GN=DPH3 PE=1 SV=1[more]
BLAST of ClCG02G005510 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I4L91.0e-3993.98diphthamide biosynthesis protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111470... [more]
A0A1S3BZL51.8e-3993.98diphthamide biosynthesis protein 3-like OS=Cucumis melo OX=3656 GN=LOC103495198 ... [more]
A0A5A7SJN11.8e-3993.98Diphthamide biosynthesis protein 3-like OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A6J1C5191.8e-3992.77diphthamide biosynthesis protein 3-like OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A0A0K4W91.2e-3892.77DPH-type MB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G075060... [more]
BLAST of ClCG02G005510 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G15910.11.4e-3379.27CSL zinc finger domain-containing protein [more]
AT2G15910.21.4e-3379.27CSL zinc finger domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036671DPH-type metal-binding domain superfamilyGENE3D3.10.660.10DPH Zinc fingercoord: 1..81
e-value: 1.5E-28
score: 100.3
IPR036671DPH-type metal-binding domain superfamilySUPERFAMILY144217CSL zinc fingercoord: 2..72
IPR007872DPH-type metal-binding domainPFAMPF05207zf-CSLcoord: 4..58
e-value: 3.7E-21
score: 74.6
IPR007872DPH-type metal-binding domainPROSITEPS51074DPH_MBcoord: 2..58
score: 23.350922
NoneNo IPR availablePANTHERPTHR21454:SF2DPH3 HOMOLOGcoord: 2..72
IPR044248Diphthamide biosynthesis protein 3/4-likePANTHERPTHR21454DPH3 HOMOLOG-RELATEDcoord: 2..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G005510.2ClCG02G005510.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine
biological_process GO:0002098 tRNA wobble uridine modification
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
molecular_function GO:0046872 metal ion binding