ClCG02G004420 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G004420
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Auxin-responsive protein
Location	CG_Chr02: 4562111 .. 4562615 (-)
RNA-Seq Expression	ClCG02G004420
Synteny	ClCG02G004420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACCGGAATCGCTAAATCCAACAACATCCGCCGCATCGTTAGCATTCGCCAGATGCTGCAGCGGTGGCGCAAGAAGGCTCGTGTTACCGCCTCTTCTCGCCGCTCCGGCGCCAGTGATGCTCCGTCTGATGTTCCGGCCGGTCACGTGGCGATCTGTGTAGGAAGCAGTTCTAGAAGGTTCGTCGTTCGAGCTACTTACTTGAACCATCCGATCTTCCAAAACCTTCTCTTGCAAGCCGAAGAGGAGTACGGATTTACGAACCAAGGTCCTCTCGCGATTCCTTGTGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCCCGGTCCGAATCCGGTCGGTTCTTGAATCTTCAGGATTTTCGCCGCCGCTGCCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAGTCTCGGCCGTTGCTTTTTGATTTCGCCGATAAATCGGTTTGTTAGTAAGATGGAAAGGGAACTAACTGAAGATTGCGACTCGGGCTGGTGA

mRNA sequence

ATGTCGACCGGAATCGCTAAATCCAACAACATCCGCCGCATCGTTAGCATTCGCCAGATGCTGCAGCGGTGGCGCAAGAAGGCTCGTGTTACCGCCTCTTCTCGCCGCTCCGGCGCCAGTGATGCTCCGTCTGATGTTCCGGCCGGTCACGTGGCGATCTGTGTAGGAAGCAGTTCTAGAAGGTTCGTCGTTCGAGCTACTTACTTGAACCATCCGATCTTCCAAAACCTTCTCTTGCAAGCCGAAGAGGAGTACGGATTTACGAACCAAGGTCCTCTCGCGATTCCTTGTGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCCCGGATTTTCGCCGCCGCTGCCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAGTCTCGGCCGTTGCTTTTTGATTTCGCCGATAAATCGGTTTGTTAGTAAGATGGAAAGGGAACTAACTGAAGATTGCGACTCGGGCTGGTGA

Coding sequence (CDS)

ATGTCGACCGGAATCGCTAAATCCAACAACATCCGCCGCATCGTTAGCATTCGCCAGATGCTGCAGCGGTGGCGCAAGAAGGCTCGTGTTACCGCCTCTTCTCGCCGCTCCGGCGCCAGTGATGCTCCGTCTGATGTTCCGGCCGGTCACGTGGCGATCTGTGTAGGAAGCAGTTCTAGAAGGTTCGTCGTTCGAGCTACTTACTTGAACCATCCGATCTTCCAAAACCTTCTCTTGCAAGCCGAAGAGGAGTACGGATTTACGAACCAAGGTCCTCTCGCGATTCCTTGTGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCCCGGATTTTCGCCGCCGCTGCCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAGTCTCGGCCGTTGCTTTTTGATTTCGCCGATAAATCGGTTTGTTAGTAAGATGGAAAGGGAACTAACTGAAGATTGCGACTCGGGCTGGTGA

Protein sequence

MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSRIFAAAATSTLRVVSSVSLGRCFLISPINRFVSKMERELTEDCDSGW

Homology

[Close]

BLAST of ClCG02G004420 vs. NCBI nr
Match: XP_038888410.1 (indole-3-acetic acid-induced protein ARG7-like [Benincasa hispida])

HSP 1 Score: 210.3 bits (534), Expect = 1.2e-50
Identity = 107/111 (96.40%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSR 60
           MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSG  DAPSDVPAGHVAICVGSS R
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGTGDAPSDVPAGHVAICVGSSCR 60

Query: 61  RFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSR 112
           RFVVRATYLNHPIFQ LLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSR
Sbjct: 61  RFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSR 111

[Close]

BLAST of ClCG02G004420 vs. NCBI nr
Match: KAA0049684.1 (auxin-responsive protein SAUR36-like [Cucumis melo var. makuwa] >TYK12188.1 auxin-responsive protein SAUR36-like [Cucumis melo var. makuwa])

HSP 1 Score: 198.0 bits (502), Expect = 6.2e-47
Identity = 103/111 (92.79%), Postives = 106/111 (95.50%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSR 60
           MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR  ASDAP+DVPAGHVAICVGSS R
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR--ASDAPTDVPAGHVAICVGSSCR 60

Query: 61  RFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSR 112
           RFVVRATYLNHPIFQ LLLQAEEEYGF NQGPLAIPC+ESVFEEVLR+VSR
Sbjct: 61  RFVVRATYLNHPIFQKLLLQAEEEYGFRNQGPLAIPCEESVFEEVLRSVSR 109

[Close]

BLAST of ClCG02G004420 vs. NCBI nr
Match: XP_004144827.1 (indole-3-acetic acid-induced protein ARG7 [Cucumis sativus] >KGN43195.1 hypothetical protein Csa_020388 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-46
Identity = 102/111 (91.89%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSR 60
           MSTGI KSNNIRRIVSIRQMLQRWRKKARVTASSRR+G  DAPSDVPAGHVAICVGSS R
Sbjct: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAG--DAPSDVPAGHVAICVGSSCR 60

Query: 61  RFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSR 112
           RFVVRATYLNHPIFQ LL QAEEEYGF NQGPLAIPC+ESVFEEVLRTVSR
Sbjct: 61  RFVVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSR 109

[Close]

BLAST of ClCG02G004420 vs. NCBI nr
Match: XP_008448020.1 (PREDICTED: auxin-responsive protein SAUR36-like [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-46
Identity = 102/111 (91.89%), Postives = 106/111 (95.50%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSR 60
           MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR  ASDAP+DVPAGHVAICVGSS R
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR--ASDAPTDVPAGHVAICVGSSCR 60

Query: 61  RFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSR 112
           RFVVRAT+LNHPIFQ LLLQAEEEYGF NQGPLAIPC+ESVFEEVLR+VSR
Sbjct: 61  RFVVRATFLNHPIFQKLLLQAEEEYGFRNQGPLAIPCEESVFEEVLRSVSR 109

[Close]

BLAST of ClCG02G004420 vs. NCBI nr
Match: KAG6572078.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011742.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.7 bits (496), Expect = 3.1e-46
Identity = 100/111 (90.09%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSR 60
           MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR +G  D PSDVPAGHVA+CVGSS R
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAG--DTPSDVPAGHVAVCVGSSCR 60

Query: 61  RFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSR 112
           RFVVRATYLNHPIF+ LLLQAEEEYGF NQGPLAIPCDESVFEEVLRTVSR
Sbjct: 61  RFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSR 109

[Close]

BLAST of ClCG02G004420 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-12
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 44  SDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFE 103
           S VP+GHV + VG    RFVV A  LNHP+F  LL ++ +EYG+T +G L IPC+  VFE
Sbjct: 46  SSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFE 105

Query: 104 EVLRTVSRIFAAAATSTLRVVSSVS 129
           +V   V  + +  A  T  +++S+S
Sbjct: 106 QV---VESLRSGIADDTSELIASLS 127

[Close]

BLAST of ClCG02G004420 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.7e-12
Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 34  SRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTN-QGP 93
           S R+ AS    D P G++A+ VG + +RFV+  ++LN P+FQ+LL QAEEE+G+ +  G 
Sbjct: 13  SARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGG 72

Query: 94  LAIPCDESVFEEVLRTVS 111
           L IPC E +F+ +   +S
Sbjct: 73  LTIPCSEDLFQHITSCLS 90

[Close]

BLAST of ClCG02G004420 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11
Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 46  VPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEV 105
           VP GHV + VG    RFVV A  LNHP+F  LL Q+ +EYG+  QG L IPC   VFE +
Sbjct: 38  VPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERI 97

Query: 106 LRTV 110
           L ++
Sbjct: 98  LESL 101

[Close]

BLAST of ClCG02G004420 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11
Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 46  VPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEV 105
           VPAGHV + VG    RFVV A  +NHPIF  LL ++ +EYG+  +G L IPC   VFE V
Sbjct: 54  VPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERV 113

Query: 106 LRTV 110
           + T+
Sbjct: 114 VETL 117

[Close]

BLAST of ClCG02G004420 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.3e-11
Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 32  ASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTN-Q 91
           AS   + AS    DV  G++A+ VG   RRFV+  +YLN P FQ+LL QAEEE+G+ +  
Sbjct: 11  ASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPN 70

Query: 92  GPLAIPCDESVFEEV 106
           G L IPC E VF+ +
Sbjct: 71  GGLTIPCSEDVFQHI 85

[Close]

BLAST of ClCG02G004420 vs. ExPASy TrEMBL
Match: A0A5D3CM24 (Auxin-responsive protein SAUR36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001330 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.0e-47
Identity = 103/111 (92.79%), Postives = 106/111 (95.50%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSR 60
           MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR  ASDAP+DVPAGHVAICVGSS R
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR--ASDAPTDVPAGHVAICVGSSCR 60

Query: 61  RFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSR 112
           RFVVRATYLNHPIFQ LLLQAEEEYGF NQGPLAIPC+ESVFEEVLR+VSR
Sbjct: 61  RFVVRATYLNHPIFQKLLLQAEEEYGFRNQGPLAIPCEESVFEEVLRSVSR 109

[Close]

BLAST of ClCG02G004420 vs. ExPASy TrEMBL
Match: A0A0A0K0H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G007930 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 6.7e-47
Identity = 102/111 (91.89%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSR 60
           MSTGI KSNNIRRIVSIRQMLQRWRKKARVTASSRR+G  DAPSDVPAGHVAICVGSS R
Sbjct: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAG--DAPSDVPAGHVAICVGSSCR 60

Query: 61  RFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSR 112
           RFVVRATYLNHPIFQ LL QAEEEYGF NQGPLAIPC+ESVFEEVLRTVSR
Sbjct: 61  RFVVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSR 109

[Close]

BLAST of ClCG02G004420 vs. ExPASy TrEMBL
Match: A0A1S3BJN8 (auxin-responsive protein SAUR36-like OS=Cucumis melo OX=3656 GN=LOC103490329 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 8.7e-47
Identity = 102/111 (91.89%), Postives = 106/111 (95.50%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSR 60
           MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR  ASDAP+DVPAGHVAICVGSS R
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR--ASDAPTDVPAGHVAICVGSSCR 60

Query: 61  RFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSR 112
           RFVVRAT+LNHPIFQ LLLQAEEEYGF NQGPLAIPC+ESVFEEVLR+VSR
Sbjct: 61  RFVVRATFLNHPIFQKLLLQAEEEYGFRNQGPLAIPCEESVFEEVLRSVSR 109

[Close]

BLAST of ClCG02G004420 vs. ExPASy TrEMBL
Match: A0A6J1I2L6 (auxin-induced protein 6B-like OS=Cucurbita maxima OX=3661 GN=LOC111468443 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.3e-46
Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSR 60
           MSTGI KSNNIRRIVSIRQMLQRWR+KARVTASSR +G  D PSDVPAGHVA+CVGSS R
Sbjct: 1   MSTGIVKSNNIRRIVSIRQMLQRWRRKARVTASSRSAG--DTPSDVPAGHVAVCVGSSCR 60

Query: 61  RFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSR 112
           RFVVRATYLNHPIF+ LLLQAEEEYGF NQGPLAIPCDESVFEEVLRTVSR
Sbjct: 61  RFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSR 109

[Close]

BLAST of ClCG02G004420 vs. ExPASy TrEMBL
Match: A0A6J1GKR4 (auxin-induced protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111455254 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 7.4e-46
Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSR 60
           MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR +G  D PSDVPAGHVA+CVGSS R
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAG--DTPSDVPAGHVAVCVGSSCR 60

Query: 61  RFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSR 112
           RFVVRATYLNHPIF+ LLLQAEEEYGF NQGPLAIPCDESVFEEVLR VSR
Sbjct: 61  RFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRIVSR 109

[Close]

BLAST of ClCG02G004420 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 145.6 bits (366), Expect = 3.4e-35
Identity = 71/111 (63.96%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSR 60
           M+  + K + IR IV +RQML+RWR KAR+++ SR       PSDVP+GHVA+CVGS  R
Sbjct: 1   MAGSLVKCSKIRHIVRLRQMLRRWRNKARLSSVSR-----CVPSDVPSGHVAVCVGSGCR 60

Query: 61  RFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSR 112
           RFVVRA+YLNHPI  NLL+QAEEE+GF NQGPL IPC+ESVFEE +R +SR
Sbjct: 61  RFVVRASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISR 106

[Close]

BLAST of ClCG02G004420 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 144.4 bits (363), Expect = 7.5e-35
Identity = 71/111 (63.96%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSR 60
           M+ G+ K + IR IV +RQML+RWR +AR+++S  R      PSDVP+GHVA+ VGSS R
Sbjct: 1   MAGGLGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRC----VPSDVPSGHVAVYVGSSCR 60

Query: 61  RFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSR 112
           RFVVRATYLNHP+ +NLL+QAEEE+GF NQGPL IPC+ESVFEE +R +SR
Sbjct: 61  RFVVRATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISR 107

[Close]

BLAST of ClCG02G004420 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 137.9 bits (346), Expect = 7.1e-33
Identity = 73/122 (59.84%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSR 60
           M+ GI K + IR IV +RQML++WR KAR+ +S RRS     PSDVP+GHVA+ VG S R
Sbjct: 1   MAGGIGKCSKIRHIVKLRQMLRQWRNKARM-SSVRRS----VPSDVPSGHVAVYVGRSCR 60

Query: 61  RFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSRIFAAAATST 120
           RFVV ATYLNHPI  NLL++AEEE+GF NQGPL IPC+ESVFEE +R ++R      T  
Sbjct: 61  RFVVLATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITRSSRFTCTDD 117

Query: 121 LR 123
           L+
Sbjct: 121 LK 117

[Close]

BLAST of ClCG02G004420 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 125.6 bits (314), Expect = 3.6e-29
Identity = 61/114 (53.51%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 5   IAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVV 64
           + K+N I  +V IRQML++W+KKA + +S+     +D  SDVP GHVA+ VG + RR+VV
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSN-----NDPVSDVPPGHVAVSVGENRRRYVV 60

Query: 65  RATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSRIFAAAAT 119
           RA +LNHPIF+ LL +AEEEYGF N GPLAIPCDES+FE+++  V+R  +++++
Sbjct: 61  RAKHLNHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSS 109

[Close]

BLAST of ClCG02G004420 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 125.6 bits (314), Expect = 3.6e-29
Identity = 61/114 (53.51%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 5   IAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVV 64
           + K+N I  +V IRQML++W+KKA + +S+     +D  SDVP GHVA+ VG + RR+VV
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSN-----NDPVSDVPPGHVAVSVGENRRRYVV 60

Query: 65  RATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSRIFAAAAT 119
           RA +LNHPIF+ LL +AEEEYGF N GPLAIPCDES+FE+++  V+R  +++++
Sbjct: 61  RAKHLNHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSS 109

The following BLAST results are available for this feature:

BLAST of ClCG02G004420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888410.1	1.2e-50	96.40	indole-3-acetic acid-induced protein ARG7-like [Benincasa hispida]	[more]
KAA0049684.1	6.2e-47	92.79	auxin-responsive protein SAUR36-like [Cucumis melo var. makuwa] >TYK12188.1 auxi...	[more]
XP_004144827.1	1.4e-46	91.89	indole-3-acetic acid-induced protein ARG7 [Cucumis sativus] >KGN43195.1 hypothet...	[more]
XP_008448020.1	1.8e-46	91.89	PREDICTED: auxin-responsive protein SAUR36-like [Cucumis melo]	[more]
KAG6572078.1	3.1e-46	90.09	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]...	[more]

BLAST of ClCG02G004420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64538	2.3e-12	44.71	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
P32295	8.7e-12	43.59	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
Q9SGU2	1.5e-11	51.56	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
Q9SA49	1.9e-11	51.56	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]
P33083	3.3e-11	48.00	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of ClCG02G004420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CM24	3.0e-47	92.79	Auxin-responsive protein SAUR36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0K0H1	6.7e-47	91.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G007930 PE=3 SV=1	[more]
A0A1S3BJN8	8.7e-47	91.89	auxin-responsive protein SAUR36-like OS=Cucumis melo OX=3656 GN=LOC103490329 PE=...	[more]
A0A6J1I2L6	4.3e-46	89.19	auxin-induced protein 6B-like OS=Cucurbita maxima OX=3661 GN=LOC111468443 PE=3 S...	[more]
A0A6J1GKR4	7.4e-46	89.19	auxin-induced protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111455254 PE=3...	[more]

BLAST of ClCG02G004420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19840.1	3.4e-35	63.96	SAUR-like auxin-responsive protein family	[more]
AT1G75590.1	7.5e-35	63.96	SAUR-like auxin-responsive protein family	[more]
AT5G10990.1	7.1e-33	59.84	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	3.6e-29	53.51	SAUR-like auxin-responsive protein family	[more]
AT4G34750.2	3.6e-29	53.51	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 18..108 e-value: 1.3E-30 score: 105.4
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 7..120
None	No IPR available	PANTHER	PTHR31374:SF183	SMALL AUXIN-UP RNA-RELATED	coord: 7..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G004420.1	ClCG02G004420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin