ClCG02G002530 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGCGGTTGGCGGCGGCGGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCGCGAGTGGCAGATGAAAGCATGTACGGCGTCGGTGTTGCCGGAGTTGACGGCGGCGGAAGGGTGGCGGCGGTGGTCGACGGCGGCCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTACAGTCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTCTCTCAACCACATGTAAACGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATCTTAATGTAA ATGTGGCGGTTGGCGGCGGCGGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCGCGAGTGGCAGATGAAAGCATGTACGGCGTCGGTGTTGCCGGAGTTGACGGCGGCGGAAGGGTGGCGGCGGTGGTCGACGGCGGCCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTACAGTCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTCTCTCAACCACATGTAAACGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATCTTAATGTAA ATGTGGCGGTTGGCGGCGGCGGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCGCGAGTGGCAGATGAAAGCATGTACGGCGTCGGTGTTGCCGGAGTTGACGGCGGCGGAAGGGTGGCGGCGGTGGTCGACGGCGGCCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTACAGTCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTCTCTCAACCACATGTAAACGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATCTTAATGTAA MWRLAAAVRRNLHNIRKSPRVADESMYGVGVAGVDGGGRVAAVVDGGRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM Homology
BLAST of ClCG02G002530 vs. NCBI nr
Match: XP_038888385.1 (uncharacterized protein LOC120078235 [Benincasa hispida]) HSP 1 Score: 214.2 bits (544), Expect = 5.9e-52 Identity = 107/112 (95.54%), Postives = 107/112 (95.54%), Query Frame = 0
BLAST of ClCG02G002530 vs. NCBI nr
Match: XP_031744820.1 (uncharacterized protein LOC101211016 [Cucumis sativus] >KAE8645720.1 hypothetical protein Csa_020583 [Cucumis sativus]) HSP 1 Score: 210.7 bits (535), Expect = 6.5e-51 Identity = 105/111 (94.59%), Postives = 105/111 (94.59%), Query Frame = 0
BLAST of ClCG02G002530 vs. NCBI nr
Match: KAA0059153.1 (uncharacterized protein E6C27_scaffold430G00710 [Cucumis melo var. makuwa] >TYK02535.1 uncharacterized protein E5676_scaffold201G00140 [Cucumis melo var. makuwa]) HSP 1 Score: 207.6 bits (527), Expect = 5.5e-50 Identity = 106/112 (94.64%), Postives = 106/112 (94.64%), Query Frame = 0
BLAST of ClCG02G002530 vs. NCBI nr
Match: KAG6572248.1 (hypothetical protein SDJN03_28976, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011878.1 hypothetical protein SDJN02_26785, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 198.4 bits (503), Expect = 3.3e-47 Identity = 98/111 (88.29%), Postives = 102/111 (91.89%), Query Frame = 0
BLAST of ClCG02G002530 vs. NCBI nr
Match: XP_022969305.1 (uncharacterized protein LOC111468352 [Cucurbita maxima]) HSP 1 Score: 196.8 bits (499), Expect = 9.7e-47 Identity = 98/111 (88.29%), Postives = 101/111 (90.99%), Query Frame = 0
BLAST of ClCG02G002530 vs. ExPASy TrEMBL
Match: A0A5D3BTM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00140 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 2.7e-50 Identity = 106/112 (94.64%), Postives = 106/112 (94.64%), Query Frame = 0
BLAST of ClCG02G002530 vs. ExPASy TrEMBL
Match: A0A6J1HZK3 (uncharacterized protein LOC111468352 OS=Cucurbita maxima OX=3661 GN=LOC111468352 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 4.7e-47 Identity = 98/111 (88.29%), Postives = 101/111 (90.99%), Query Frame = 0
BLAST of ClCG02G002530 vs. ExPASy TrEMBL
Match: A0A1S3C134 (uncharacterized protein LOC103495667 OS=Cucumis melo OX=3656 GN=LOC103495667 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 7.5e-45 Identity = 97/107 (90.65%), Postives = 98/107 (91.59%), Query Frame = 0
BLAST of ClCG02G002530 vs. ExPASy TrEMBL
Match: A0A6J1C6U0 (uncharacterized protein LOC111007908 OS=Momordica charantia OX=3673 GN=LOC111007908 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.7e-41 Identity = 91/111 (81.98%), Postives = 96/111 (86.49%), Query Frame = 0
BLAST of ClCG02G002530 vs. ExPASy TrEMBL
Match: A0A6J1ER34 (uncharacterized protein LOC111437033 OS=Cucurbita moschata OX=3662 GN=LOC111437033 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.5e-40 Identity = 92/112 (82.14%), Postives = 97/112 (86.61%), Query Frame = 0
BLAST of ClCG02G002530 vs. TAIR 10
Match: AT5G35732.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04795.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 110.9 bits (276), Expect = 6.5e-25 Identity = 59/111 (53.15%), Postives = 78/111 (70.27%), Query Frame = 0
BLAST of ClCG02G002530 vs. TAIR 10
Match: AT2G04795.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35732.1); Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 97.4 bits (241), Expect = 7.5e-21 Identity = 54/112 (48.21%), Postives = 72/112 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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