ClCG02G002430 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGTGGAAATATTGGACAGTACGACCATTGTCAACTTTGTTGAAGATGAGGCAGCTTTTAGTGCCTACATAAGAGACCGGTTCAATTACCTCGACACTAACCATGATGGTCTCCTTTCCTATAATGAGCTACTGGAGGAGTTACAGAGCCTCAGGGTGTTCGAGACCGATTTCGGAATTGATGAGAAGCCTGATCCAGATGAGCTTTCTTCAGTGTATAGTTCTCTGTTTTTGCAATTCGATCGTGACTTGGATGGAACGGTTAATCTGGATGAGTATAAGACTGAGACCAAAAGAATGATGCTAGCTATGGCTAATGGGATGGGTTTCTTACCTGTTCAGATGGTGCTTGAAGAAGGCAGCTTCTTGATGAAGGCTGTTGAGCGAGAAACTGCAATAATGGCCGCTTGA ATGAGTGTGGAAATATTGGACAGTACGACCATTGTCAACTTTGTTGAAGATGAGGCAGCTTTTAGTGCCTACATAAGAGACCGGTTCAATTACCTCGACACTAACCATGATGGTCTCCTTTCCTATAATGAGCTACTGGAGGAGTTACAGAGCCTCAGGGTGTTCGAGACCGATTTCGGAATTGATGAGAAGCCTGATCCAGATGAGCTTTCTTCAGTGTATAGTTCTCTGTTTTTGCAATTCGATCGTGACTTGGATGGAACGGTTAATCTGGATGAGTATAAGACTGAGACCAAAAGAATGATGCTAGCTATGGCTAATGGGATGGGTTTCTTACCTGTTCAGATGGTGCTTGAAGAAGGCAGCTTCTTGATGAAGGCTGTTGAGCGAGAAACTGCAATAATGGCCGCTTGA ATGAGTGTGGAAATATTGGACAGTACGACCATTGTCAACTTTGTTGAAGATGAGGCAGCTTTTAGTGCCTACATAAGAGACCGGTTCAATTACCTCGACACTAACCATGATGGTCTCCTTTCCTATAATGAGCTACTGGAGGAGTTACAGAGCCTCAGGGTGTTCGAGACCGATTTCGGAATTGATGAGAAGCCTGATCCAGATGAGCTTTCTTCAGTGTATAGTTCTCTGTTTTTGCAATTCGATCGTGACTTGGATGGAACGGTTAATCTGGATGAGTATAAGACTGAGACCAAAAGAATGATGCTAGCTATGGCTAATGGGATGGGTTTCTTACCTGTTCAGATGGTGCTTGAAGAAGGCAGCTTCTTGATGAAGGCTGTTGAGCGAGAAACTGCAATAATGGCCGCTTGA MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA Homology
BLAST of ClCG02G002430 vs. NCBI nr
Match: XP_038887952.1 (uncharacterized protein LOC120077919 [Benincasa hispida]) HSP 1 Score: 243.4 bits (620), Expect = 1.1e-60 Identity = 125/137 (91.24%), Postives = 133/137 (97.08%), Query Frame = 0
BLAST of ClCG02G002430 vs. NCBI nr
Match: XP_008455501.1 (PREDICTED: uncharacterized protein LOC103495653 [Cucumis melo] >KAA0059112.1 Calcium-binding EF-hand family protein [Cucumis melo var. makuwa] >TYK21617.1 Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]) HSP 1 Score: 238.4 bits (607), Expect = 3.6e-59 Identity = 123/137 (89.78%), Postives = 129/137 (94.16%), Query Frame = 0
BLAST of ClCG02G002430 vs. NCBI nr
Match: XP_038888297.1 (uncharacterized protein LOC120078146 [Benincasa hispida]) HSP 1 Score: 228.4 bits (581), Expect = 3.7e-56 Identity = 117/137 (85.40%), Postives = 124/137 (90.51%), Query Frame = 0
BLAST of ClCG02G002430 vs. NCBI nr
Match: XP_011658679.1 (uncharacterized protein LOC105436072 [Cucumis sativus]) HSP 1 Score: 227.3 bits (578), Expect = 8.3e-56 Identity = 118/137 (86.13%), Postives = 126/137 (91.97%), Query Frame = 0
BLAST of ClCG02G002430 vs. NCBI nr
Match: KAE8645727.1 (hypothetical protein Csa_020381 [Cucumis sativus]) HSP 1 Score: 227.3 bits (578), Expect = 8.3e-56 Identity = 118/137 (86.13%), Postives = 126/137 (91.97%), Query Frame = 0
BLAST of ClCG02G002430 vs. ExPASy TrEMBL
Match: A0A5A7UT84 (Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00150 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.7e-59 Identity = 123/137 (89.78%), Postives = 129/137 (94.16%), Query Frame = 0
BLAST of ClCG02G002430 vs. ExPASy TrEMBL
Match: A0A1S3C175 (uncharacterized protein LOC103495653 OS=Cucumis melo OX=3656 GN=LOC103495653 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.7e-59 Identity = 123/137 (89.78%), Postives = 129/137 (94.16%), Query Frame = 0
BLAST of ClCG02G002430 vs. ExPASy TrEMBL
Match: A0A0A0K3B2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037625 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 4.0e-56 Identity = 118/137 (86.13%), Postives = 126/137 (91.97%), Query Frame = 0
BLAST of ClCG02G002430 vs. ExPASy TrEMBL
Match: A0A0A0KHT7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G418660 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 5.2e-56 Identity = 116/137 (84.67%), Postives = 125/137 (91.24%), Query Frame = 0
BLAST of ClCG02G002430 vs. ExPASy TrEMBL
Match: A0A5D3E445 (Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00260 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 1.5e-55 Identity = 115/137 (83.94%), Postives = 124/137 (90.51%), Query Frame = 0
BLAST of ClCG02G002430 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25 Identity = 55/135 (40.74%), Postives = 94/135 (69.63%), Query Frame = 0
BLAST of ClCG02G002430 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein ) HSP 1 Score: 61.6 bits (148), Expect = 5.6e-10 Identity = 39/128 (30.47%), Postives = 67/128 (52.34%), Query Frame = 0
BLAST of ClCG02G002430 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein ) HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06 Identity = 32/125 (25.60%), Postives = 58/125 (46.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|