ClCG02G001400 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G001400
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Cytochrome b6-f complex iron-sulfur subunit
Location	CG_Chr02: 1549534 .. 1553066 (-)
RNA-Seq Expression	ClCG02G001400
Synteny	ClCG02G001400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAAGTTTGTGGCCATTTGGAACCGATGTGGCTAATTGCCTTATCTTGTCCCTTTTGTGGACATCAAAATTCAGCAACTTCACGAACAATCTCTCAAATTTCTACTCCAACCACTGATATAACATTACCCACATTTTAGTTTCTTAGAAAATTCCTCTCCACTCCTTGCTCTGATCCATCCATGGCGTCTTCCACTCTATCTTCTGCAACTCCCTCACAGGTATCTTCAATTTCTTGATTGAACTTCACTGATCTTGTAAGCAACTTGAAATTTGATGCCCATTGTTGTTGTTTTTCAGTTATGTGCCAGCAGAAGTGCTTTGTTCTGTCCCTCTCAAGCCCTTTTGAGGAAACCCAAAAACACTCAAATGGGGGCAAAGGGAAAGGAGGTTAAAATCTCTTGTCAAGCCACTAGTATTCCAGCTGATCGAGTCCCGGATATGGGTAAAAGGAAAACCATGAATTTGCTTCTTTTGGGTGCCATTGGCCTTCCCACTGCTACTATGTTGTATCCTTACACCTATTTCTTTGTCCCTCCTGGGTAAGTGTTCTTCTCTCTGATTCTGAATGACCTGCTGGATTATCAAGGATTAGCATGAAGTTCTTTTAATTTTGTTGTTTAGAAGAAATTAGGCTTTGGTTGATGAATGGTTTGTTTTGAGGATGATTTTGTGATCTCTGATTAGATGAAAATTGTGTTAATGATGGGAATTCTGATGGAGTTTGGTAATATGAGAGTGAACGTTTGACTGTCTAGTATTTGTAATAGCCAAATATTTATGATGAATGAATGAGGAAGTTGCAGCTGTTTGCCATGTTGATTGATTGTCTATATTCTTCCATTGATTATTGTTGTATTGACACTCATTACTCAACTGGCATTAGAAACTCTAATTTTGTGTGAAATGAAAATATGCTTGTATATATCACAAGCTGAGCTTGTAATTGAAAAGCAACTTTCAAGTGGGGTCATGTCCTCTTTCATCAGGTGGATTATAACCAGTAGTAATACAATGTTGGCCATGATCTTAAAAGCTATCCGTTTTTGTTAAATTATAAAAAGGTTAAATTAAAATGCCCTGAACTATGCATTTCGTGTCAAAACTGCCCATGAACTATGCACTTTGTGCCAAAAATACTCTAAACTTTCAAAATTTTCAAAAATAACCTTAAACTTTAAAGAAAAAGTCGCTAGTTTTGGATGGAAGTTCTGTTTAAAAAATACGCTTAACTGAAAAAAGGTTCAAAAATACCTTCATCATAAATTTATGAACAGAAATTGTCGTTGCAAAAATAATTTTAAATTTAAAAAAAAAAATTGTTTAAAATTGCTCCTAACATTAATATGGTAGTCACAATTTGTTTGAAGTTTTCTTAAGTTCAAAAAGAATAAACTTTAAAAAGATCCTTAAACTTCTGAGGTATTCTTGAAACAAAACTTTAACGGTTTCCATCCAAAACTAACAACAAAGGTATTTTTGAATTCTTTTTTAAAGTTTAAGGGTATTTTTGAAACTTTTGAAAGTTCAAGAGTATTTTTGACACAAAGTACATAGTTCAAGGGTATTTTTATAATTTAACCTTATAAAAAATACTTCTAGACTCTGCTTTAGTTTTTTCCTTCCAAAAATACTCTTAAACCTTTCAAAAGTGGCAAGATTACCATTGATTTTTCATAGAGCTTATACCATTGGAGTAGCAATCGGACAAAAATTGGGACTTGGAATGGTGTGGTGGTGACTTAAAACGGAATTTTGGATCGTCGCTGAACCATTATAGGTCCAATTTCTATCCGAAATTCTAATTGATTTCTACTCCAAGGGTAATTTTGAAATGTTTACGAAAGGTTAAGTGTAATATTATAACTTTTGAAAGAATTTTGGTATTTACTTATTTATATGTAAAACCCTCATACCTGTCAAAAGTTGCAAGATTACCATTAACCTTTATAAACCTTATACCATTGGATTAGAAATCATTTAGAATTTTGGATGGAAATTGGGACTTGGAATGGTATGACGGTGACCTAGAATAGAAATTTGGATCACCACATCATTTTAGGTCCCAATTTCTGTCCAAAATTCTTAATGATTTCTACCTCAAGGGTAATTTTGAGGTGTTTATGAAAGGGGTTAGTTCTAGGCTAATATTGCAACTTTTGAAAGGAGGAAAATGAATAGGGGTGCTTGTGCAGGGTTTTTTCTTTCAATTTTCTCCTTAGTCTCTGATCCTTTAAACTGGATTTTCATTTCAAAAACTGGGATTCCTTACTTGCTGCATTCTGCTTGTTCATGTGGTAACCTTTTGAACCTTTCCTGTATACAATTTCAGTACTGGAGGTGCCGGTGGTGGGATTGTTGCCAAGGATGCTCTTGGAAATGATGTTCTTGCAGAGGAATGGCTAAAGGCACACGGCCCCGGAGACCGAACCCTCACACAGGGGTTGAGGGTACTGTAACTCTCTAACTTTGCTTAAATACTCCAAGCAGCTATTACCACCCTGCAGCCAGCCCTTGTTGCTTCTCAAAGACCTTGTGTTTCTTTGTTTCACATGTTTATTTAAAATTGAAGTAGTAACATGATTATTGATCATCTCCCATTGAGATTAGCATATTCAAAAAGGAAAAATGAAACGTGCATATTTAGAAGTCTTATTGAAAAAAAATGTAATCAGAGTATTCATATTACAAAACTAGATTTGAAAATGCACATCTGATATCATATAGCAAGTTTCCATAATAGAAACGTGCATACTCTGATTTGCTTCCATGTCATTTGAAGATGAACAAATAGTATGTGCATTTAAAGGCAAACCGGTGATGATGGATTTCAGGGAGACCCTACCTACCTTGTAGTCGAGAAGGATAAAACGCTTGCGACATATGGAATCAATGCAGTTTGCACTCACCTTGGATGCGTCGTGCCATGGAATGCAGCTGAGAACAAATTCATCTGCCCTTGCCATGGATCCCAATACAACGATCAAGGCAGGGTGGTCAGAGGACCTGCACCTTTGGTAATACTTCTCTAAACCTTTTTCCTTTTGCTTCCATGCCATTGAGAGGCCTTTAAGCAAGCAACAAGCTTCATCTACTAACTGTGAGATTATGTGTTGATTCGTAGTAACTAAATAGAGTTAAATTTTTCTTTGTTGGAACAGTCTCTTGCATTGGTTCATGCTGATGTAGATGACGGGAAGGTAGTGTTTGTCCCATGGGTCGAAACCGATTTCAGAACTGGCGAGAATCCATGGTGGGCTTAAGCCTCCTTCTCATGTAACATCTCTCCACATCCATCTCTTCAATTTGAAGCAAATTTTTTTTCTTCCATCTCCTCTCAGTTTTCTCCTGTTTGTATATTTTGGTTTTGTTGGATGAAATATATAAAATACAAGACAATTGAATCCTAGGCTTTGTATTGATAAGCTTTGTTATTAAGTACCACTCTCTATTGTTCTACATTCTCTTCATCTTGTATTCAGTACATGGATTCTGGGTGGATTAGCTAGCTGCTGCAAATAATAGTGTTATAG

mRNA sequence

CTGAAGTTTGTGGCCATTTGGAACCGATGTGGCTAATTGCCTTATCTTGTCCCTTTTGTGGACATCAAAATTCAGCAACTTCACGAACAATCTCTCAAATTTCTACTCCAACCACTGATATAACATTACCCACATTTTAGTTTCTTAGAAAATTCCTCTCCACTCCTTGCTCTGATCCATCCATGGCGTCTTCCACTCTATCTTCTGCAACTCCCTCACAGTTATGTGCCAGCAGAAGTGCTTTGTTCTGTCCCTCTCAAGCCCTTTTGAGGAAACCCAAAAACACTCAAATGGGGGCAAAGGGAAAGGAGGTTAAAATCTCTTGTCAAGCCACTAGTATTCCAGCTGATCGAGTCCCGGATATGGGTAAAAGGAAAACCATGAATTTGCTTCTTTTGGGTGCCATTGGCCTTCCCACTGCTACTATGTTGTATCCTTACACCTATTTCTTTGTCCCTCCTGGTACTGGAGGTGCCGGTGGTGGGATTGTTGCCAAGGATGCTCTTGGAAATGATGTTCTTGCAGAGGAATGGCTAAAGGCACACGGCCCCGGAGACCGAACCCTCACACAGGGGTTGAGGGTACTGCAAACCGGTGATGATGGATTTCAGGGAGACCCTACCTACCTTGTAGTCGAGAAGGATAAAACGCTTGCGACATATGGAATCAATGCAGTTTGCACTCACCTTGGATGCGTCGTGCCATGGAATGCAGCTGAGAACAAATTCATCTGCCCTTGCCATGGATCCCAATACAACGATCAAGGCAGGGTGGTCAGAGGACCTGCACCTTTGTCTCTTGCATTGGTTCATGCTGATGTAGATGACGGGAAGGTAGTGTTTGTCCCATGGGTCGAAACCGATTTCAGAACTGGCGAGAATCCATGGTGGGCTTAAGCCTCCTTCTCATGTAACATCTCTCCACATCCATCTCTTCAATTTGAAGCAAATTTTTTTTCTTCCATCTCCTCTCAGTTTTCTCCTGTTTGTATATTTTGGTTTTGTTGGATGAAATATATAAAATACAAGACAATTGAATCCTAGGCTTTGTATTGATAAGCTTTGTTATTAAGTACCACTCTCTATTGTTCTACATTCTCTTCATCTTGTATTCAGTACATGGATTCTGGGTGGATTAGCTAGCTGCTGCAAATAATAGTGTTATAG

Coding sequence (CDS)

ATGGCGTCTTCCACTCTATCTTCTGCAACTCCCTCACAGTTATGTGCCAGCAGAAGTGCTTTGTTCTGTCCCTCTCAAGCCCTTTTGAGGAAACCCAAAAACACTCAAATGGGGGCAAAGGGAAAGGAGGTTAAAATCTCTTGTCAAGCCACTAGTATTCCAGCTGATCGAGTCCCGGATATGGGTAAAAGGAAAACCATGAATTTGCTTCTTTTGGGTGCCATTGGCCTTCCCACTGCTACTATGTTGTATCCTTACACCTATTTCTTTGTCCCTCCTGGTACTGGAGGTGCCGGTGGTGGGATTGTTGCCAAGGATGCTCTTGGAAATGATGTTCTTGCAGAGGAATGGCTAAAGGCACACGGCCCCGGAGACCGAACCCTCACACAGGGGTTGAGGGTACTGCAAACCGGTGATGATGGATTTCAGGGAGACCCTACCTACCTTGTAGTCGAGAAGGATAAAACGCTTGCGACATATGGAATCAATGCAGTTTGCACTCACCTTGGATGCGTCGTGCCATGGAATGCAGCTGAGAACAAATTCATCTGCCCTTGCCATGGATCCCAATACAACGATCAAGGCAGGGTGGTCAGAGGACCTGCACCTTTGTCTCTTGCATTGGTTCATGCTGATGTAGATGACGGGAAGGTAGTGTTTGTCCCATGGGTCGAAACCGATTTCAGAACTGGCGAGAATCCATGGTGGGCTTAA

Protein sequence

MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPDMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKAHGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA

Homology

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BLAST of ClCG02G001400 vs. NCBI nr
Match: ADU05416.1 (chloroplast Rieske-type ion-sulfur protein [Citrullus lanatus])

HSP 1 Score: 466.1 bits (1198), Expect = 1.8e-127
Identity = 227/237 (95.78%), Postives = 227/237 (95.78%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120
           MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120

Query: 121 HGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAEN 180
           HGPGDRTLTQGLR          GDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAEN
Sbjct: 121 HGPGDRTLTQGLR----------GDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAEN 180

Query: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 238
           KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

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BLAST of ClCG02G001400 vs. NCBI nr
Match: XP_008455364.1 (PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Cucumis melo])

HSP 1 Score: 458.4 bits (1178), Expect = 3.8e-125
Identity = 221/237 (93.25%), Postives = 225/237 (94.94%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLS ATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD
Sbjct: 1   MASSTLSPATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120
           MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGG+VAKDALGNDV A+EWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGVVAKDALGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAEN 180
           HGPGDRTLTQGL+          GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAEN
Sbjct: 121 HGPGDRTLTQGLK----------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAEN 180

Query: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 238
           KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of ClCG02G001400 vs. NCBI nr
Match: XP_038888589.1 (cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Benincasa hispida])

HSP 1 Score: 457.2 bits (1175), Expect = 8.5e-125
Identity = 220/237 (92.83%), Postives = 225/237 (94.94%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPK+TQMG+KGKEVKISCQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSTQMGSKGKEVKISCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120
           MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGG+VAKDALGNDV A+EWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGVVAKDALGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAEN 180
           HGPGDRTLTQGL+          GDPTYLVVEKDKTLATYGINAVCTHLGCVVPWN AEN
Sbjct: 121 HGPGDRTLTQGLK----------GDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNTAEN 180

Query: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 238
           KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of ClCG02G001400 vs. NCBI nr
Match: KAA0031609.1 (cytochrome b6-f complex iron-sulfur subunit [Cucumis melo var. makuwa] >TYK07061.1 cytochrome b6-f complex iron-sulfur subunit [Cucumis melo var. makuwa])

HSP 1 Score: 456.4 bits (1173), Expect = 1.5e-124
Identity = 219/237 (92.41%), Postives = 224/237 (94.51%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLS ATPSQLCASRSALFCPSQALLRKPKNTQMG KGKE+KISCQATSIPADRVPD
Sbjct: 1   MASSTLSPATPSQLCASRSALFCPSQALLRKPKNTQMGVKGKEIKISCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120
           MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGG+VAKDALGNDV A+EWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGVVAKDALGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAEN 180
           HGPGDRTLTQGL+          GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAEN
Sbjct: 121 HGPGDRTLTQGLK----------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAEN 180

Query: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 238
           KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of ClCG02G001400 vs. NCBI nr
Match: XP_022969251.1 (cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 452.6 bits (1163), Expect = 2.1e-123
Identity = 218/237 (91.98%), Postives = 223/237 (94.09%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPK+ QMGAKGK VK+ CQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKVCCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120
           MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDA GNDVLA+EWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVLADEWLKA 120

Query: 121 HGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAEN 180
           HGPGDRTLTQGLR          GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAEN
Sbjct: 121 HGPGDRTLTQGLR----------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAEN 180

Query: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 238
           KFICPCHGSQYNDQGRVVRGPAPLSLALVHAD+DDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 227

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BLAST of ClCG02G001400 vs. ExPASy Swiss-Prot
Match: P26291 (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum OX=3888 GN=petC PE=2 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 5.4e-98
Identity = 176/240 (73.33%), Postives = 197/240 (82.08%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKG-KEVKISCQATSIPADRVP 60
           M+S+TLS  TPSQLC+ +S + CPS ALL KP  TQM  +G K +KI+CQATSIPADRVP
Sbjct: 1   MSSTTLSPTTPSQLCSGKSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVP 60

Query: 61  DMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLK 120
           DM KRKT+NLLLLGA+ LPTA ML PY  F VPPG+G + GG VAKDA+GNDV+A EWLK
Sbjct: 61  DMSKRKTLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLK 120

Query: 121 AHGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAE 180
            H PGDRTLTQGL+          GDPTYLVVEKD+TLAT+ INAVCTHLGCVVP+N AE
Sbjct: 121 THAPGDRTLTQGLK----------GDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAE 180

Query: 181 NKFICPCHGSQYNDQGRVVRGPAPLSLALVHAD--VDDGKVVFVPWVETDFRTGENPWWA 238
           NKFICPCHGSQYNDQGRVVRGPAPLSLAL H D  V+DGKVVFVPWVETDFRTG+ PWW+
Sbjct: 181 NKFICPCHGSQYNDQGRVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRTGDAPWWS 230

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BLAST of ClCG02G001400 vs. ExPASy Swiss-Prot
Match: P08980 (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea OX=3562 GN=petC PE=1 SV=2)

HSP 1 Score: 350.9 bits (899), Expect = 1.1e-95
Identity = 171/239 (71.55%), Postives = 193/239 (80.75%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKG--KEVKISCQATSIPADRV 60
           MAS TLSSATPSQLC+S++ +F PS AL +  +   + +K   + +K++CQATSIPAD V
Sbjct: 1   MASFTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60

Query: 61  PDMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWL 120
           PDM KR+T+NLLLLGA+ LPT  ML PY  FFVPPG G   GG +AKDALGNDV+A EWL
Sbjct: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120

Query: 121 KAHGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAA 180
           K H PGDRTLTQGL+          GDPTYLVVE DKTLAT+GINAVCTHLGCVVP+NAA
Sbjct: 121 KTHAPGDRTLTQGLK----------GDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAA 180

Query: 181 ENKFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 238
           ENKFICPCHGSQYN+QGRVVRGPAPLSLAL H DVDDGKVVFVPW ETDFRTGE PWW+
Sbjct: 181 ENKFICPCHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 229

[Close]

BLAST of ClCG02G001400 vs. ExPASy Swiss-Prot
Match: Q9ZR03 (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=petC PE=1 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.1e-94
Identity = 178/241 (73.86%), Postives = 193/241 (80.08%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKP--KNTQMGAKGK-EVKISCQATSIPADR 60
           MASS+LS AT  QL +SRSAL   S  L  KP   N QM  K K  ++ISCQA+SIPADR
Sbjct: 1   MASSSLSPAT--QLGSSRSALMAMSSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADR 60

Query: 61  VPDMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEW 120
           VPDM KRKT+NLLLLGA+ LPT  ML PY  FFVPPGTGG GGG  AKDALGNDV+A EW
Sbjct: 61  VPDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEW 120

Query: 121 LKAHGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNA 180
           LK HGPGDRTLTQGL+          GDPTYLVVE DKTLATYGINAVCTHLGCVVPWN 
Sbjct: 121 LKTHGPGDRTLTQGLK----------GDPTYLVVENDKTLATYGINAVCTHLGCVVPWNK 180

Query: 181 AENKFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDD-GKVVFVPWVETDFRTGENPWW 238
           AENKF+CPCHGSQYN QGRVVRGPAPLSLAL HAD+D+ GKV+FVPWVETDFRTG+ PWW
Sbjct: 181 AENKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWW 229

[Close]

BLAST of ClCG02G001400 vs. ExPASy Swiss-Prot
Match: O49078 (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Fritillaria agrestis OX=64177 GN=petC PE=2 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 8.1e-94
Identity = 170/240 (70.83%), Postives = 194/240 (80.83%), Query Frame = 0


Query: 1   MASSTLSSA-TPSQLCASRSALFCPSQALLRKPKNTQMGAKGK-EVKISCQATSIPADRV 60
           MAS+TLS+  TPSQL A+++  + PS+ALL K        K     K++CQATSIPADRV
Sbjct: 1   MASTTLSATPTPSQLSAAKNGAYSPSRALLGKTARGLYPEKEMVSRKVTCQATSIPADRV 60

Query: 61  PDMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWL 120
           PDMGKR+TMNLLLLGA+ LPTA ML PY  FFVPP +GG GGGIVAKDA+GND++A  WL
Sbjct: 61  PDMGKRQTMNLLLLGALSLPTAGMLIPYGAFFVPPSSGGGGGGIVAKDAVGNDIVAAAWL 120

Query: 121 KAHGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAA 180
           K HGPGDRTL QGLR          GDPTYLVVE D++LATYGINAVCTHLGCVVPWN A
Sbjct: 121 KTHGPGDRTLAQGLR----------GDPTYLVVENDRSLATYGINAVCTHLGCVVPWNKA 180

Query: 181 ENKFICPCHGSQYNDQGRVVRGPAPLSLALVHADV-DDGKVVFVPWVETDFRTGENPWWA 238
           ENKF+CPCHGSQYN+QG+VVRGPAPLSLAL H D+ ++GKVVFVPWVETDFRTGENPWW+
Sbjct: 181 ENKFLCPCHGSQYNNQGKVVRGPAPLSLALSHCDISEEGKVVFVPWVETDFRTGENPWWS 230

[Close]

BLAST of ClCG02G001400 vs. ExPASy Swiss-Prot
Match: P30361 (Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacum OX=4097 GN=petC1 PE=2 SV=2)

HSP 1 Score: 344.7 bits (883), Expect = 8.1e-94
Identity = 176/240 (73.33%), Postives = 190/240 (79.17%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPK--NTQMGAKGKEVKISCQATSIPA-DR 60
           MASSTLS  T  QLC+S+S L   SQ LL KP   N+    K K +K+ C ATSIPA DR
Sbjct: 1   MASSTLSPVT--QLCSSKSGLSSVSQCLLVKPMKINSHGLGKDKRMKVKCMATSIPADDR 60

Query: 61  VPDMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEW 120
           VPDM KR  MNLLLLGA+ LPTA ML PY  FFVPPG+GG  GG  AKDALGNDV+A EW
Sbjct: 61  VPDMEKRNLMNLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIASEW 120

Query: 121 LKAHGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNA 180
           LK H PG+RTLTQGL+          GDPTYLVVE D TLATYGINAVCTHLGCVVP+NA
Sbjct: 121 LKTHPPGNRTLTQGLK----------GDPTYLVVENDGTLATYGINAVCTHLGCVVPFNA 180

Query: 181 AENKFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 238
           AENKFICPCHGSQYN+QGRVVRGPAPLSLAL HAD+DDGKVVFVPWVETDFRTGE+PWWA
Sbjct: 181 AENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 228

[Close]

BLAST of ClCG02G001400 vs. ExPASy TrEMBL
Match: E7E844 (Plastoquinol--plastocyanin reductase OS=Citrullus lanatus OX=3654 GN=PetC PE=2 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 8.9e-128
Identity = 227/237 (95.78%), Postives = 227/237 (95.78%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120
           MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120

Query: 121 HGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAEN 180
           HGPGDRTLTQGLR          GDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAEN
Sbjct: 121 HGPGDRTLTQGLR----------GDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAEN 180

Query: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 238
           KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of ClCG02G001400 vs. ExPASy TrEMBL
Match: A0A1S3C1Z0 (Plastoquinol--plastocyanin reductase OS=Cucumis melo OX=3656 GN=LOC103495550 PE=3 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.9e-125
Identity = 221/237 (93.25%), Postives = 225/237 (94.94%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLS ATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD
Sbjct: 1   MASSTLSPATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120
           MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGG+VAKDALGNDV A+EWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGVVAKDALGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAEN 180
           HGPGDRTLTQGL+          GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAEN
Sbjct: 121 HGPGDRTLTQGLK----------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAEN 180

Query: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 238
           KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of ClCG02G001400 vs. ExPASy TrEMBL
Match: A0A5D3C581 (Plastoquinol--plastocyanin reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003790 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 7.0e-125
Identity = 219/237 (92.41%), Postives = 224/237 (94.51%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLS ATPSQLCASRSALFCPSQALLRKPKNTQMG KGKE+KISCQATSIPADRVPD
Sbjct: 1   MASSTLSPATPSQLCASRSALFCPSQALLRKPKNTQMGVKGKEIKISCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120
           MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGG+VAKDALGNDV A+EWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGVVAKDALGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAEN 180
           HGPGDRTLTQGL+          GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAEN
Sbjct: 121 HGPGDRTLTQGLK----------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAEN 180

Query: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 238
           KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of ClCG02G001400 vs. ExPASy TrEMBL
Match: A0A6J1HXA3 (Plastoquinol--plastocyanin reductase OS=Cucurbita maxima OX=3661 GN=LOC111468309 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.0e-123
Identity = 218/237 (91.98%), Postives = 223/237 (94.09%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPK+ QMGAKGK VK+ CQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKVCCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120
           MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDA GNDVLA+EWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVLADEWLKA 120

Query: 121 HGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAEN 180
           HGPGDRTLTQGLR          GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAEN
Sbjct: 121 HGPGDRTLTQGLR----------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAEN 180

Query: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 238
           KFICPCHGSQYNDQGRVVRGPAPLSLALVHAD+DDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of ClCG02G001400 vs. ExPASy TrEMBL
Match: I7K435 (Plastoquinol--plastocyanin reductase OS=Cucumis sativus OX=3659 GN=PetC PE=2 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.3e-123
Identity = 219/237 (92.41%), Postives = 223/237 (94.09%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGK VKISCQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDA GNDV A+EWLKA
Sbjct: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAEN 180
           HGPGDRTLTQGL+          GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAEN
Sbjct: 121 HGPGDRTLTQGLK----------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAEN 180

Query: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 238
           KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVD+GKVVFVPWVETDFRTGENPWWA
Sbjct: 181 KFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of ClCG02G001400 vs. TAIR 10
Match: AT4G03280.1 (photosynthetic electron transfer C )

HSP 1 Score: 346.7 bits (888), Expect = 1.5e-95
Identity = 178/241 (73.86%), Postives = 193/241 (80.08%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKP--KNTQMGAKGK-EVKISCQATSIPADR 60
           MASS+LS AT  QL +SRSAL   S  L  KP   N QM  K K  ++ISCQA+SIPADR
Sbjct: 1   MASSSLSPAT--QLGSSRSALMAMSSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADR 60

Query: 61  VPDMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEW 120
           VPDM KRKT+NLLLLGA+ LPT  ML PY  FFVPPGTGG GGG  AKDALGNDV+A EW
Sbjct: 61  VPDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEW 120

Query: 121 LKAHGPGDRTLTQGLRVLQTGDDGFQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNA 180
           LK HGPGDRTLTQGL+          GDPTYLVVE DKTLATYGINAVCTHLGCVVPWN 
Sbjct: 121 LKTHGPGDRTLTQGLK----------GDPTYLVVENDKTLATYGINAVCTHLGCVVPWNK 180

Query: 181 AENKFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDD-GKVVFVPWVETDFRTGENPWW 238
           AENKF+CPCHGSQYN QGRVVRGPAPLSLAL HAD+D+ GKV+FVPWVETDFRTG+ PWW
Sbjct: 181 AENKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWW 229

[Close]

BLAST of ClCG02G001400 vs. TAIR 10
Match: AT4G03280.2 (photosynthetic electron transfer C )

HSP 1 Score: 332.4 bits (851), Expect = 2.9e-91
Identity = 163/217 (75.12%), Postives = 176/217 (81.11%), Query Frame = 0


Query: 25  SQALLRKP--KNTQMGAKGK-EVKISCQATSIPADRVPDMGKRKTMNLLLLGAIGLPTAT 84
           S  L  KP   N QM  K K  ++ISCQA+SIPADRVPDM KRKT+NLLLLGA+ LPT  
Sbjct: 4   SSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADRVPDMEKRKTLNLLLLGALSLPTGY 63

Query: 85  MLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKAHGPGDRTLTQGLRVLQTGDDG 144
           ML PY  FFVPPGTGG GGG  AKDALGNDV+A EWLK HGPGDRTLTQGL+        
Sbjct: 64  MLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEWLKTHGPGDRTLTQGLK-------- 123

Query: 145 FQGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRVVRGP 204
             GDPTYLVVE DKTLATYGINAVCTHLGCVVPWN AENKF+CPCHGSQYN QGRVVRGP
Sbjct: 124 --GDPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAENKFLCPCHGSQYNAQGRVVRGP 183

Query: 205 APLSLALVHADVDD-GKVVFVPWVETDFRTGENPWWA 238
           APLSLAL HAD+D+ GKV+FVPWVETDFRTG+ PWW+
Sbjct: 184 APLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWWS 210

[Close]

BLAST of ClCG02G001400 vs. TAIR 10
Match: AT5G13430.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit )

HSP 1 Score: 55.5 bits (132), Expect = 7.0e-08
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 165 VCTHLGCVVPWNAAE-NKFICPCHGSQYNDQGRVVRGPAPLSL 207
           VCTHLGC+   NA +   + CPCHGS Y+  GR+ +GPAP +L
Sbjct: 214 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNL 256

[Close]

BLAST of ClCG02G001400 vs. TAIR 10
Match: AT5G13440.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit )

HSP 1 Score: 55.5 bits (132), Expect = 7.0e-08
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 165 VCTHLGCVVPWNAAE-NKFICPCHGSQYNDQGRVVRGPAPLSL 207
           VCTHLGC+   NA +   + CPCHGS Y+  GR+ +GPAP +L
Sbjct: 216 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNL 258

The following BLAST results are available for this feature:

BLAST of ClCG02G001400 vs. NCBI nr


Match Name	E-value	Identity	Description
ADU05416.1	1.8e-127	95.78	chloroplast Rieske-type ion-sulfur protein [Citrullus lanatus]	[more]
XP_008455364.1	3.8e-125	93.25	PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Cucumis m...	[more]
XP_038888589.1	8.5e-125	92.83	cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Benincasa hispida]	[more]
KAA0031609.1	1.5e-124	92.41	cytochrome b6-f complex iron-sulfur subunit [Cucumis melo var. makuwa] >TYK07061...	[more]
XP_022969251.1	2.1e-123	91.98	cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Cucurbita maxim...	[more]

BLAST of ClCG02G001400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P26291	5.4e-98	73.33	Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum OX=3...	[more]
P08980	1.1e-95	71.55	Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea ...	[more]
Q9ZR03	2.1e-94	73.86	Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Arabidopsis thalia...	[more]
O49078	8.1e-94	70.83	Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Fritillaria agrest...	[more]
P30361	8.1e-94	73.33	Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacu...	[more]

BLAST of ClCG02G001400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E7E844	8.9e-128	95.78	Plastoquinol--plastocyanin reductase OS=Citrullus lanatus OX=3654 GN=PetC PE=2 S...	[more]
A0A1S3C1Z0	1.9e-125	93.25	Plastoquinol--plastocyanin reductase OS=Cucumis melo OX=3656 GN=LOC103495550 PE=...	[more]
A0A5D3C581	7.0e-125	92.41	Plastoquinol--plastocyanin reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1HXA3	1.0e-123	91.98	Plastoquinol--plastocyanin reductase OS=Cucurbita maxima OX=3661 GN=LOC111468309...	[more]
I7K435	1.3e-123	92.41	Plastoquinol--plastocyanin reductase OS=Cucumis sativus OX=3659 GN=PetC PE=2 SV=...	[more]

BLAST of ClCG02G001400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03280.1	1.5e-95	73.86	photosynthetic electron transfer C	[more]
AT4G03280.2	2.9e-91	75.12	photosynthetic electron transfer C	[more]
AT5G13430.1	7.0e-08	53.49	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT5G13440.1	7.0e-08	53.49	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 161..172 score: 67.08 coord: 182..194 score: 61.15 coord: 194..206 score: 65.0
None	No IPR available	GENE3D	1.20.5.700	Single helix bin	coord: 48..92 e-value: 9.1E-20 score: 72.3
None	No IPR available	PANTHER	PTHR10134:SF38	CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT	coord: 1..234
None	No IPR available	CDD	cd03471	Rieske_cytochrome_b6f	coord: 102..237 e-value: 3.31796E-92 score: 264.997
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 149..206 e-value: 7.5E-12 score: 45.0
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 144..220 score: 20.625753
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 93..237 e-value: 2.6E-45 score: 155.4
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 56..236
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 1..234
IPR023960	Cytochrome b6-f complex iron-sulfur subunit	HAMAP	MF_01335	Cytb6_f_Rieske	coord: 50..237 score: 39.448467

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G001400.1	ClCG02G001400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0045158	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0009496	plastoquinol--plastocyanin reductase activity