ClCG02G001020 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG02G001020
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
LocationCG_Chr02: 1194872 .. 1197481 (+)
RNA-Seq ExpressionClCG02G001020
SyntenyClCG02G001020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAAGTTAACGATGATGATTCCGATCTCTTGTTCTTGTTGCCTTTTCTTGAGTAGGAACATTAAGAAAAGCTTAGAGAATGTTCGGAATTGAGTTCATTAACAGCCCAAACTTAGATTCCACAGTTCACTCCTCTTGTTTTATTCACACGTTGAAAATTCTGTAAATATTTTATCATTTTGATGCACTTTCTCGGCAACCAAACTGAAGTTACAGAGTGTTTTTTTTTTTGCTTTTGTACTGTATGAAAACATCGGTTTGCGTAGAACGATTGAAACTTTCCGAGGTTTATTATGTGTTCTCTGTTTTAGCTTCGAAAATTTGAAATTCGACCTTCAATGTTATCTTTTCCCGAATTCTTTGTTGAAGTTCTGCGGTTCCTTCCTTCTGTTGCTTCCGGTCTCTCTTCTTTCAAGTTTCAATTAGTTTCCTCTTCTTCGAAATCAGTTCCTTTCATGTTTCAAATCTTTCGTTATAAATTTTCCCCTTCCATTTCTCGATTATCTGTTGATTTGTTTCTGATGTTACTCCGCTGTCTACATCGAAATTGACGAATTCTAGAGTCCAATCTAGGACTTGAATTGTTAGATATCAGATAAAATCTCAGTATATTTAATGGATGTTGAGGAATTTTGAAGCCTAATGCCGGTAAAATCTTTGTAGCAGATAAGATGGAAAATTGGGGGAATTTTTAAGCAATGCTTCTGTTCTTTCAGATAATTAGGTTATTTCATTCCTACTCACTTTCTCCAGCTAGTTCATCTCAATCGTCAAATCAAACTCCTAGTCCTACTAACAAGTTGGTTCATTATTGATAATGGGCCTGTACCTAAACGCGTAAACATATTAGAAATTACTTGCCTCCATACTTAGCTATTGAGTCAGAATCCATTCTTCAAATTTTAGTTTTATTAAATTGAACCATGAAACCGAGTAAACTAGTAGTATGAATATTTTCCGAGGGAAATCTGTGGTGTATTATTGGACAAGGATGTCTGCTTTTGCTGGTGTATTGAGTAGTTTAGATTTGAATTTGACATTGTGTTTGTAGCCAATTATGATAGTATTGTAATGGGCGCATCTTGAGAGCATAATCTTTTTGCAGTTTACCCAGCCACATCGCAGGAGAAACTTGAAAGATTTTGTTAAAAAAAGAAAAAAGAGTTTGTTATATTTTCAACTATGATTAAACATATAAGAGGTTACGTATGATTAAATATATAGTAAGTTACGGAAAGATGAGTGTAATCCAAGATGTATTCAAATATTTTTGTTTATCTTTATGATTTGATTTTGAATATTGTATTAGAAATAATTTGGAGTAGTAGTTTAAATTATGAAATAGAGAATGGAACTTTTGATGCAGAAAGTGGCTCCATGGATGAGTGTTCCACAATTTGGGGATTGGGAGCAGAAGGGAGAGGTGCCTGATTATTCAGTTGATTTCTCAAAAATAAGGGAAAATAGGAAACAACACAAAAGAGATTTGTCAAGGGCAAGCATTGGGAATGAAGAGGAGCTAATGGCCTCATCAGCCACTCCCACTACAAACACACCTCATTCTCATGCTGATGAAAATCATCAACTGAATCCCACCAACAGCAACTCCCCAACGGTCAGATTCCTTTCCCTCATTACCTTTCTTTTTTCCTTTTTAATTTTCCAGCTTTTACTTTAAGCATCTCTCCTTTTTCCTCGCGTGTGGGCATGCATGTGATAAAACTGACCCTGCCTCTCAATAATTTATTCAATATGCTATTGTGGGAAAAAATAACATAAAGATCTATCCGTAATGCCACTGGATCTAAAAGTTTTATTCAAGTTAAAATCCTTCTACTTTATACTTTTGAGTTTTGACTAGGAAAGAGAAAACAAAAGAAACGAACAAAGAAAAGAATGAAAAAAAAAAAAAAAAAACTTAGACATTCAAGTCAATATTGAGTTTGTGGGTAACATGACAATAGATAATAATACTATAGTGTTTTCAAAATACTTTGACGAATGACCTACGTCATTTATATATATAGATCTTTAGTCTTACGTAACTAATGCCTTCTTTGTTGTCGAGTTATTACTTGGATGTTTGCACTACCATGGGTCCTACCGAAGTCCTTCATGGGTTGTAGAGTCTTTCATAGGTCCTAAAGAGGTCTTTCATAGATCTTCCAAGGTTCTTAAGGGGATTGTACAGTCTTCCATGATTTTGGTCAATTCTCTTGGATCGGCCTCCTAATGCCGTGACTGACTATGGGTAGGACATAGGTCTTATCAACTTTGGATTAGCCATTTCAGATCTCTATCTCTATTTTTCGATCTCCTATCTTTTCAATTCTTGGTCTTGTCTCATCTCTGCACATCAACCCCCCATAACATATCTCACATTACCGGAGAATTGAAACCTATGACCAATGAAACAAGTCCGAATATCTAACCGGTTAACAATCTAACTTATGTTTCATTTGTTTTATCTTCAGCATGGCCAGACTTAAATGATACATTCCCGACTTCCTAAATTTAGATGAACATTTCCCAAACATATTTTAATCTATTTTATCTTAATGGCTCAAGAGGAATTGACTGTTCAGGATATGAAGAATATTGGGTAG

mRNA sequence

ATGGTGGAAGTTAACGATGATGATTCCGATCTCTTGTTCTTGTTGCCTTTTCTTGACTTCGAAAATTTGAAATTCGACCTTCAATGTTATCTTTTCCCGAATTCTTTGTTGAAGTTCTGCGGTTCCTTCCTTCTGTTGCTTCCGAAAGTGGCTCCATGGATGAGTGTTCCACAATTTGGGGATTGGGAGCAGAAGGGAGAGGTGCCTGATTATTCAGTTGATTTCTCAAAAATAAGGGAAAATAGGAAACAACACAAAAGAGATTTGTCAAGGGCAAGCATTGGGAATGAAGAGGAGCTAATGGCCTCATCAGCCACTCCCACTACAAACACACCTCATTCTCATGCTGATGAAAATCATCAACTGAATCCCACCAACAGCAACTCCCCAACGGATATGAAGAATATTGGGTAG

Coding sequence (CDS)

ATGGTGGAAGTTAACGATGATGATTCCGATCTCTTGTTCTTGTTGCCTTTTCTTGACTTCGAAAATTTGAAATTCGACCTTCAATGTTATCTTTTCCCGAATTCTTTGTTGAAGTTCTGCGGTTCCTTCCTTCTGTTGCTTCCGAAAGTGGCTCCATGGATGAGTGTTCCACAATTTGGGGATTGGGAGCAGAAGGGAGAGGTGCCTGATTATTCAGTTGATTTCTCAAAAATAAGGGAAAATAGGAAACAACACAAAAGAGATTTGTCAAGGGCAAGCATTGGGAATGAAGAGGAGCTAATGGCCTCATCAGCCACTCCCACTACAAACACACCTCATTCTCATGCTGATGAAAATCATCAACTGAATCCCACCAACAGCAACTCCCCAACGGATATGAAGAATATTGGGTAG

Protein sequence

MVEVNDDDSDLLFLLPFLDFENLKFDLQCYLFPNSLLKFCGSFLLLLPKVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTPHSHADENHQLNPTNSNSPTDMKNIG
Homology
BLAST of ClCG02G001020 vs. NCBI nr
Match: XP_038900911.1 (uncharacterized protein LOC120087959 [Benincasa hispida])

HSP 1 Score: 171.0 bits (432), Expect = 7.0e-39
Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 0

Query: 49  KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPT 108
           KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELM SSATPT
Sbjct: 7   KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMVSSATPT 66

Query: 109 TNTPHSHADENHQLNPTNSNSPTDMKNI 137
           TNTPHSHADENHQLNPTNSNSPT  K+I
Sbjct: 67  TNTPHSHADENHQLNPTNSNSPTTRKSI 94

BLAST of ClCG02G001020 vs. NCBI nr
Match: XP_004148448.1 (uncharacterized protein LOC101211284 [Cucumis sativus] >KGN62090.1 hypothetical protein Csa_006726 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 4.6e-38
Identity = 83/88 (94.32%), Postives = 84/88 (95.45%), Query Frame = 0

Query: 49  KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPT 108
           KVAPWMSVPQFGDWEQKG VPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPT
Sbjct: 7   KVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPT 66

Query: 109 TNTPHSHADENHQLNPTNSNSPTDMKNI 137
           TNTPHSH DENHQLNPTNSNSPT  K+I
Sbjct: 67  TNTPHSHVDENHQLNPTNSNSPTTRKSI 94

BLAST of ClCG02G001020 vs. NCBI nr
Match: XP_008457901.1 (PREDICTED: uncharacterized protein LOC103497474 [Cucumis melo])

HSP 1 Score: 162.2 bits (409), Expect = 3.3e-36
Identity = 81/88 (92.05%), Postives = 82/88 (93.18%), Query Frame = 0

Query: 49  KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPT 108
           KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASS TPT
Sbjct: 7   KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSVTPT 66

Query: 109 TNTPHSHADENHQLNPTNSNSPTDMKNI 137
           TNTPHS  DEN QLNPTNSNSPT  K+I
Sbjct: 67  TNTPHSIVDENRQLNPTNSNSPTTRKSI 94

BLAST of ClCG02G001020 vs. NCBI nr
Match: XP_023006844.1 (uncharacterized protein LOC111499515 [Cucurbita maxima])

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 75/93 (80.65%), Postives = 80/93 (86.02%), Query Frame = 0

Query: 49  KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSA--- 108
           KVAPW+SVPQFGDWEQK EVPDYSVDFSKIRENRKQHKRDLSRASIGNEE+LMASSA   
Sbjct: 7   KVAPWLSVPQFGDWEQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEQLMASSATST 66

Query: 109 --TPTTNTPHSHADENHQLNPTNSNSPTDMKNI 137
             T TTNT H HA ENHQLN +N+NSPT  K+I
Sbjct: 67  TTTTTTNTSHFHAHENHQLNHSNTNSPTTRKSI 99

BLAST of ClCG02G001020 vs. NCBI nr
Match: XP_023533301.1 (uncharacterized protein LOC111795235 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.4 bits (355), Expect = 6.0e-30
Identity = 74/93 (79.57%), Postives = 79/93 (84.95%), Query Frame = 0

Query: 49  KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPT 108
           KVAPW+SVPQFGDWEQK EVPDYSVDFSKIRENRKQHKRDLSRASIGNEE+LMASSAT T
Sbjct: 7   KVAPWLSVPQFGDWEQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEQLMASSATST 66

Query: 109 TNT-----PHSHADENHQLNPTNSNSPTDMKNI 137
           T T      H HA ENHQLN +N+NSPT  K+I
Sbjct: 67  TTTTTTDASHFHAHENHQLNHSNTNSPTTRKSI 99

BLAST of ClCG02G001020 vs. ExPASy TrEMBL
Match: A0A0A0LJN9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297140 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.2e-38
Identity = 83/88 (94.32%), Postives = 84/88 (95.45%), Query Frame = 0

Query: 49  KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPT 108
           KVAPWMSVPQFGDWEQKG VPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPT
Sbjct: 7   KVAPWMSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPT 66

Query: 109 TNTPHSHADENHQLNPTNSNSPTDMKNI 137
           TNTPHSH DENHQLNPTNSNSPT  K+I
Sbjct: 67  TNTPHSHVDENHQLNPTNSNSPTTRKSI 94

BLAST of ClCG02G001020 vs. ExPASy TrEMBL
Match: A0A1S3C6Q7 (uncharacterized protein LOC103497474 OS=Cucumis melo OX=3656 GN=LOC103497474 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.6e-36
Identity = 81/88 (92.05%), Postives = 82/88 (93.18%), Query Frame = 0

Query: 49  KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPT 108
           KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASS TPT
Sbjct: 7   KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSVTPT 66

Query: 109 TNTPHSHADENHQLNPTNSNSPTDMKNI 137
           TNTPHS  DEN QLNPTNSNSPT  K+I
Sbjct: 67  TNTPHSIVDENRQLNPTNSNSPTTRKSI 94

BLAST of ClCG02G001020 vs. ExPASy TrEMBL
Match: A0A6J1L3A7 (uncharacterized protein LOC111499515 OS=Cucurbita maxima OX=3661 GN=LOC111499515 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 5.8e-31
Identity = 75/93 (80.65%), Postives = 80/93 (86.02%), Query Frame = 0

Query: 49  KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSA--- 108
           KVAPW+SVPQFGDWEQK EVPDYSVDFSKIRENRKQHKRDLSRASIGNEE+LMASSA   
Sbjct: 7   KVAPWLSVPQFGDWEQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEQLMASSATST 66

Query: 109 --TPTTNTPHSHADENHQLNPTNSNSPTDMKNI 137
             T TTNT H HA ENHQLN +N+NSPT  K+I
Sbjct: 67  TTTTTTNTSHFHAHENHQLNHSNTNSPTTRKSI 99

BLAST of ClCG02G001020 vs. ExPASy TrEMBL
Match: A0A6J1G5D0 (uncharacterized protein LOC111451041 OS=Cucurbita moschata OX=3662 GN=LOC111451041 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.8e-30
Identity = 74/94 (78.72%), Postives = 79/94 (84.04%), Query Frame = 0

Query: 49  KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPT 108
           KVAPW+SVPQFGDWEQK EVPDYSVDFSKIRENRKQHKRDLSRASIGNEE+LMASSAT T
Sbjct: 7   KVAPWLSVPQFGDWEQKREVPDYSVDFSKIRENRKQHKRDLSRASIGNEEQLMASSATTT 66

Query: 109 TNT------PHSHADENHQLNPTNSNSPTDMKNI 137
           T T       H HA ENHQLN +N+NSPT  K+I
Sbjct: 67  TTTTTTTDASHFHAHENHQLNHSNTNSPTTRKSI 100

BLAST of ClCG02G001020 vs. ExPASy TrEMBL
Match: A0A6J1DU25 (uncharacterized protein LOC111024373 OS=Momordica charantia OX=3673 GN=LOC111024373 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 8.2e-25
Identity = 68/89 (76.40%), Postives = 73/89 (82.02%), Query Frame = 0

Query: 49  KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL-MASSATP 108
           KVAPW+SVPQFGDWEQKG VPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL MASS TP
Sbjct: 7   KVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTP 66

Query: 109 TTNTPHSHADENHQLNPTNSNSPTDMKNI 137
           +TN    +A  NHQ +P    SPT  K+I
Sbjct: 67  STNNTSDNA--NHQFSP--QPSPTTRKSI 91

BLAST of ClCG02G001020 vs. TAIR 10
Match: AT5G09960.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 85.9 bits (211), Expect = 2.8e-17
Identity = 46/86 (53.49%), Postives = 61/86 (70.93%), Query Frame = 0

Query: 49  KVAPWMSVPQFGDWEQK--GEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELM--ASS 108
           K  PW+SVPQFGDW+QK  G +PDYS+DF+KIRE RKQ+KRD SRAS+GNEEEL+    S
Sbjct: 8   KNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELIKPPES 67

Query: 109 ATPTTNTPHSHADENHQLNPTNSNSP 131
           AT T       ++   + +P++ + P
Sbjct: 68  ATSTAELTTVQSENQREFSPSHHHQP 93

BLAST of ClCG02G001020 vs. TAIR 10
Match: AT5G64850.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-15
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 0

Query: 49  KVAPWMSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELM------- 108
           K +PW+SVPQFGDW+QKG   DYS+DFSKIRE RK +KRD SRAS+GNEEEL+       
Sbjct: 8   KNSPWLSVPQFGDWDQKGGSIDYSMDFSKIREMRKLNKRDASRASLGNEEELINPFHDQP 67

Query: 109 -ASSATP-TTNTPHSHADENHQLNPTNSNSPTDMKNI 137
              +A P    T HS  +  ++ +  + +SP+  + I
Sbjct: 68  PVDTAKPKKLTTVHSDNNNRNEFSHHHPHSPSRRRRI 104

BLAST of ClCG02G001020 vs. TAIR 10
Match: AT5G19473.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.1e-09
Identity = 32/71 (45.07%), Postives = 43/71 (60.56%), Query Frame = 0

Query: 51  APWMSVPQFGDWEQKG--EVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPT 110
           A W  VPQFG W+QKG  +  +YSV FSK R NRKQ+K  +  +S+G+E+ELM S     
Sbjct: 8   AAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGVRHSSLGSEQELMVSVRRNH 67

Query: 111 TNTPHSHADEN 120
               H H  ++
Sbjct: 68  QQLHHRHETQD 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038900911.17.0e-3995.45uncharacterized protein LOC120087959 [Benincasa hispida][more]
XP_004148448.14.6e-3894.32uncharacterized protein LOC101211284 [Cucumis sativus] >KGN62090.1 hypothetical ... [more]
XP_008457901.13.3e-3692.05PREDICTED: uncharacterized protein LOC103497474 [Cucumis melo][more]
XP_023006844.11.2e-3080.65uncharacterized protein LOC111499515 [Cucurbita maxima][more]
XP_023533301.16.0e-3079.57uncharacterized protein LOC111795235 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LJN92.2e-3894.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297140 PE=4 SV=1[more]
A0A1S3C6Q71.6e-3692.05uncharacterized protein LOC103497474 OS=Cucumis melo OX=3656 GN=LOC103497474 PE=... [more]
A0A6J1L3A75.8e-3180.65uncharacterized protein LOC111499515 OS=Cucurbita maxima OX=3661 GN=LOC111499515... [more]
A0A6J1G5D03.8e-3078.72uncharacterized protein LOC111451041 OS=Cucurbita moschata OX=3662 GN=LOC1114510... [more]
A0A6J1DU258.2e-2576.40uncharacterized protein LOC111024373 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
Match NameE-valueIdentityDescription
AT5G09960.12.8e-1753.49FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT5G64850.11.5e-1548.45FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT5G19473.12.1e-0945.07RPM1-interacting protein 4 (RIN4) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..94
NoneNo IPR availablePANTHERPTHR33882PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEINcoord: 49..134
NoneNo IPR availablePANTHERPTHR33882:SF2PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEINcoord: 49..134

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G001020.2ClCG02G001020.2mRNA