ClCG02G000200 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G000200
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	protein LAX PANICLE 2-like
Location	CG_Chr02: 259106 .. 261970 (-)
RNA-Seq Expression	ClCG02G000200
Synteny	ClCG02G000200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATTCCATTTTGTTGTTTTAGGCAACATTTTGAGCTTCAATAATATTAATAGATTTGGAAAGCTGTGGAAAAATGGGTTCCCCTTGTTCTCATGATCAGTGGCTAGAGTTGAGTTTAGGATTGAAAGGCAGAAAGAAGAAATTACAAGAAAAAGAAGAAGAGGAAACAAAGTTGTACTGCCAAAACACTTCTCATGAGCATTTGGATGAGGAAATTAATGAGAATTGTTTGGAGTTGAGGCTTCAAATAGGGCCTAACAGAAATTACAATATGGGATTAATGGATTTAATGTATCATCAAAACAAGAAGAAGCAAAAAGGGGCATTTCAAAGTGATTGTTATTATAATTATTATAATTCTTCACTCACCAACTTTCGCCTTTCTTCTTCATCACCATCTCCCAACTCTGCTGGTTTCTGGTTCTCACTACTCTCTTCACCCAACAGGTCACCTTCCTAAACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTAATTTATTCATCATCATCTCTTCAAAAGAAAAGCTTTGATTTTCTTTCCCAAAATAAAATAGATTTTCTTTTTCTTTTCTTTTCTTTTTCTAAAGAATTTATTTTGTGAAGTTTTTTTTTACCCCACATGGAAGAAGGAGCAAATCTCTAACCTTCAAGTTAGACGGTACAAATTTAAAATTTTATGACATTTTTGCATTTAATTGTGGATTTTTTTTTAACAATATATATATGGAAAAACGAGAACTTCTCACTTCAAAATCCATACAAACAAACTTTGTATCATATTGGTCACTTTTGGTGTAATAATATGAAGTTGTTAATTATGAGAATGTTGGATTATTAATTATAATTAATAATAATTTGCATTTTGAAATGTGATAGGAAGGGAGGAGCAGCACTGCCTCAGCTACCCAAACCCTACATTAGAGTCAAGTAAGTGACAGCATTCAAAAACACCATCAAATCACACAAACCCTTTCAAATTTCCAAGTTTATTGAATACTACTTTTTGTTTTGTTTATTTTACAAAATATTTCTTTTAATTTCTTAAATAAATGTTATAAAACTTTGACCATCACATATTGAATATGCATTTTTTTAAATACAGTTAGAGGTAGAGGGTGAATATGCAATCTTATCTACCTGAGTTTTAATTTGTTAAGATAAATGTTGTATGAAAGGATGGATATTAAGTGACAAAGTGAGAAATTAATTTATACTCTAAACTTTAAATGTTGTGTGAGTTAAAACTCGAAATCGATATATGTATCAATTTAAATTCTAAACTTCACGATTATTTGTTTAACAATTTATTTTATAACTATATTTCTTTGATTTTCTTTAACAATTGTATCAATAAAACTCAAAACTAATGTTTGAGGTATATAATTCACAATTTTCAAACAAAACTCTAATTGAATTTAATTGAATTGAAGTTTTAAATTGAGTCACTAATTGAGGTGAGGTATATAATTTTTTGTTTTTGAACTGTGAAAAAGTTGAAAGATGTAAGTTTGAGCTAAGGAAAAGTGGAGTTGAAGCATTAGAATAATAATAATAATAATAATAATAATAATAATAATTTTGTGTATTTGGGTCTGAAATCAAATGATGAGAAATGGAGTGAGAAAAGGAAAAGCTGAGTGTTTGGGTTATGGATTTTGGTGAAAAACTGTTTAGGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCACAAAGTTGGGTCTCTCCAATCAAGCCCAGGTAACAAACCAAAACTATCTCATTTCTTTTAAATAATTTAATTTAATAATTATAACACAAGTATATTATATTTGGGTGCCATCAATCTTACGTAACCAAATCTTTTTACTGTTTTTTTTTTTTTAATAATGAAATCAAATATTATTCATACAATAATATATAATATATACCTTTTTTATTCAATTTTGGCATGTTATAAAATTTTCTTTTAACTTTATAATATTGTTCTTAATTTTTATTTAAATTTTTTTTTTTTTAATGTGAATTGAATACTTGAATGAGTTGCATAAAAATCGAAAATGCATCTCATATTTAAAAAAATGAAGTTGTGAACCTTAAAAAAAAAAAAAAAAAAAAATCATCTACTTGGTCCAAAGGGCACATGCATGGGTTAAAAATGATCAATTAATTGTGTGTGTCTTAGTTTTTAATATTTATTCTCTCTCTAATAATTACAAAGTCAGAGGGGTTTTTGAAAAAAAGTGAGGGATGAAGCATGCATGAGATGTCTTAGTCAAATGTCTTAGTGAGTGTTGGGATATGATGCATGCAAAATGTTGCAAGTGAATTAATGAAGAAGAGAGAGAGAGAGAGAGGGGTTTAATGATAAATAATGATGAATTGAGGGGTTGTTTTATTATTTTCTTAAGTTTTGAAGTTTTTATTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGGAGGTTGAATTATGGTGCATGGGAGAGAGGCTGTTGCAGACTCAGTCACTAAAGCAAGTGAGAGATGGAATTTGGGTGCCTAAGTTGGTGGAATTTCTAAATTCAAATTCATCATTATCAACTTCTTCAATATTTCACCATTGCTCTCATCTTATGTCTTTGCATTATGGAACAACATCCTTCTTCTAACTATATATATATATATAGTTCCTAATTATATATATATATATATTGTGGACTCTAATTAGATGTAAGTATAGTACTAAATTTCAAATGACGAGGGTCGATATTACTTATATTTATGTGTCCGAAATCAACCACATAAAAGGTAAATTAAGAATATATAGTATGAAAAGTATGTTGACGGAATATTAGTCCAATTTATTTAAAGAAGTGAAATGATTGTTTATTA

mRNA sequence

CCCATTCCATTTTGTTGTTTTAGGCAACATTTTGAGCTTCAATAATATTAATAGATTTGGAAAGCTGTGGAAAAATGGGTTCCCCTTGTTCTCATGATCAGTGGCTAGAGTTGAGTTTAGGATTGAAAGGCAGAAAGAAGAAATTACAAGAAAAAGAAGAAGAGGAAACAAAGTTGTACTGCCAAAACACTTCTCATGAGCATTTGGATGAGGAAATTAATGAGAATTGTTTGGAGTTGAGGCTTCAAATAGGGCCTAACAGAAATTACAATATGGGATTAATGGATTTAATGTATCATCAAAACAAGAAGAAGCAAAAAGGGGCATTTCAAAGTGATTGTTATTATAATTATTATAATTCTTCACTCACCAACTTTCGCCTTTCTTCTTCATCACCATCTCCCAACTCTGCTGGTTTCTGGTTCTCACTACTCTCTTCACCCAACAGGAAGGGAGGAGCAGCACTGCCTCAGCTACCCAAACCCTACATTAGAGTCAAGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCACAAAGTTGGGTCTCTCCAATCAAGCCCAGGTTGAATTATGGTGCATGGGAGAGAGGCTGTTGCAGACTCAGTCACTAAAGCAAGTGAGAGATGGAATTTGGGTGCCTAAGTTGGTGGAATTTCTAAATTCAAATTCATCATTATCAACTTCTTCAATATTTCACCATTGCTCTCATCTTATGTCTTTGCATTATGGAACAACATCCTTCTTCTAACTATATATATATATATAGTTCCTAATTATATATATATATATATTGTGGACTCTAATTAGATGTAAGTATAGTACTAAATTTCAAATGACGAGGGTCGATATTACTTATATTTATGTGTCCGAAATCAACCACATAAAAGGTAAATTAAGAATATATAGTATGAAAAGTATGTTGACGGAATATTAGTCCAATTTATTTAAAGAAGTGAAATGATTGTTTATTA

Coding sequence (CDS)

ATGGGTTCCCCTTGTTCTCATGATCAGTGGCTAGAGTTGAGTTTAGGATTGAAAGGCAGAAAGAAGAAATTACAAGAAAAAGAAGAAGAGGAAACAAAGTTGTACTGCCAAAACACTTCTCATGAGCATTTGGATGAGGAAATTAATGAGAATTGTTTGGAGTTGAGGCTTCAAATAGGGCCTAACAGAAATTACAATATGGGATTAATGGATTTAATGTATCATCAAAACAAGAAGAAGCAAAAAGGGGCATTTCAAAGTGATTGTTATTATAATTATTATAATTCTTCACTCACCAACTTTCGCCTTTCTTCTTCATCACCATCTCCCAACTCTGCTGGTTTCTGGTTCTCACTACTCTCTTCACCCAACAGGAAGGGAGGAGCAGCACTGCCTCAGCTACCCAAACCCTACATTAGAGTCAAGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCACAAAGTTGGGTCTCTCCAATCAAGCCCAGGTTGAATTATGGTGCATGGGAGAGAGGCTGTTGCAGACTCAGTCACTAAAGCAAGTGAGAGATGGAATTTGGGTGCCTAAGTTGGTGGAATTTCTAAATTCAAATTCATCATTATCAACTTCTTCAATATTTCACCATTGCTCTCATCTTATGTCTTTGCATTATGGAACAACATCCTTCTTCTAA

Protein sequence

MGSPCSHDQWLELSLGLKGRKKKLQEKEEEETKLYCQNTSHEHLDEEINENCLELRLQIGPNRNYNMGLMDLMYHQNKKKQKGAFQSDCYYNYYNSSLTNFRLSSSSPSPNSAGFWFSLLSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAQVELWCMGERLLQTQSLKQVRDGIWVPKLVEFLNSNSSLSTSSIFHHCSHLMSLHYGTTSFF

Homology

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BLAST of ClCG02G000200 vs. NCBI nr
Match: KAG6571319.1 (Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 246.1 bits (627), Expect = 2.9e-61
Identity = 146/228 (64.04%), Postives = 169/228 (74.12%), Query Frame = 0


Query: 1   MGSPCSHDQWLELSLGLKGRKKKLQEKEEEETKLYCQNTSHEHLDEEINENCLELRLQIG 60
           MGSP S  +WLELSLGL+G KKK +E ++EE ++        +LDEE   + L LRLQIG
Sbjct: 1   MGSPGS-KEWLELSLGLRGTKKKQEEAKKEEDEM--------NLDEEGEGSSLSLRLQIG 60

Query: 61  PNR-NYNMGLMDLMYHQNKKKQKGAFQSDCYYNYYNSSLTNFRLSSSSPSPNSAGFWFSL 120
           P   + NMG+M  M  QN   QK AF S    N+      +F   SS P PN AG WFSL
Sbjct: 61  PKYFDTNMGIMGFMSTQN--NQKWAFHSHSLTNF-----PHFHGLSSPPPPNPAGLWFSL 120

Query: 121 LSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAQVELWCMGERLLQT 180
            SSPNRKGGA LPQ+PK YIRVKDEKMTVLMVKKYLLTKLGLS+QA+VELWCMGERLLQT
Sbjct: 121 RSSPNRKGGAPLPQIPKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEVELWCMGERLLQT 180

Query: 181 QSLKQVRDGIWVPKLVEFLNSNSSLSTSSIFHHCSHLMSLHYGTTSFF 228
           QSLKQVRDG+W+PKLVEF+NSNSSLSTS++F   ++LM LHYGTT  F
Sbjct: 181 QSLKQVRDGVWLPKLVEFVNSNSSLSTSTMF-QTTYLMCLHYGTTCLF 211

[Close]

BLAST of ClCG02G000200 vs. NCBI nr
Match: XP_022931988.1 (protein LAX PANICLE 2-like [Cucurbita moschata])

HSP 1 Score: 243.0 bits (619), Expect = 2.4e-60
Identity = 145/228 (63.60%), Postives = 168/228 (73.68%), Query Frame = 0


Query: 1   MGSPCSHDQWLELSLGLKGRKKKLQEKEEEETKLYCQNTSHEHLDEEINENCLELRLQIG 60
           MGSP S  +WLELSLGL+G KKK +E ++EE ++        +L EE   + L LRLQIG
Sbjct: 1   MGSPGS-KEWLELSLGLRGTKKKQEEAKKEEDEM--------NLGEEGEGSSLSLRLQIG 60

Query: 61  PN-RNYNMGLMDLMYHQNKKKQKGAFQSDCYYNYYNSSLTNFRLSSSSPSPNSAGFWFSL 120
           P   + NMG+M  M  QN   QK AF S    N+      +F   SS P PN AG WFSL
Sbjct: 61  PKCFDTNMGIMGFMSTQN--NQKWAFHSHSLTNF-----PHFHGLSSPPPPNPAGLWFSL 120

Query: 121 LSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAQVELWCMGERLLQT 180
            SSPNRKGGA LPQ+PK YIRVKDEKMTVLMVKKYLLTKLGLS+QA+VELWCMGERLLQT
Sbjct: 121 RSSPNRKGGAPLPQIPKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEVELWCMGERLLQT 180

Query: 181 QSLKQVRDGIWVPKLVEFLNSNSSLSTSSIFHHCSHLMSLHYGTTSFF 228
           QSLKQVRDG+W+PKLVEF+NSNSSLSTS++F   ++LM LHYGTT  F
Sbjct: 181 QSLKQVRDGVWLPKLVEFVNSNSSLSTSTMF-QTTYLMCLHYGTTCLF 211

[Close]

BLAST of ClCG02G000200 vs. NCBI nr
Match: KAE8652308.1 (hypothetical protein Csa_022227 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 2.1e-32
Identity = 105/182 (57.69%), Postives = 123/182 (67.58%), Query Frame = 0


Query: 1   MGSPCSHDQWLELSLGLKGR-KKKLQEKEEEETK---------LYCQNTSHEHLDEEINE 60
           MGS  S  +WLELSLGL    K++LQ++E+E+ K         + C  TSHE   E +N 
Sbjct: 1   MGS-SSTQEWLELSLGLGSTGKEQLQKQEKEDEKRSRLYQEKLVICGTTSHEE-SEYVN- 60

Query: 61  NCLELRLQIGPNR--NY-NMGLMDLM-YHQNKKKQKGAFQSDCYYNYYNSSLTNFRLSSS 120
             L+LRLQIGPN   NY NMG+ D M  HQ+KKK    F SD     Y+S +T       
Sbjct: 61  --LDLRLQIGPNNKSNYCNMGIRDFMLQHQSKKKH---FHSD-----YSSIIT------- 120

Query: 121 SPSPNSAGFWFSLLSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAQ 169
               NSAG WFSLLSSPNRKGGAALPQ+PKPYIRVKDEKMTVLMVKKYLLTKLGLSNQA+
Sbjct: 121 ----NSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAE 158

[Close]

BLAST of ClCG02G000200 vs. NCBI nr
Match: XP_015879616.1 (uncharacterized protein LOC107415739 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 139.4 bits (350), Expect = 3.8e-29
Identity = 76/137 (55.47%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 94  YNSSLTNFRLSSSSPSPNSAGFWFSLLSSPN--RKGGAALPQLPKPYIRVKDEKMTVLMV 153
           Y+SS +N ++S+    PNS G WF+L +S N  R+GG  LPQ+PK YIRVKDE +TV MV
Sbjct: 192 YSSSSSNIKIST---RPNS-GLWFTLSASTNREREGGGGLPQVPKAYIRVKDENVTVSMV 251

Query: 154 KKYLLTKLGLSNQAQVELWCMGERLLQTQSLKQVRDGIWVPKLVEFLNSNSSLS--TSSI 213
           KKYL+ KLGLSN+A+++++CMG++L+ TQSLKQVRDG+W+P+LVE +NS +     T++ 
Sbjct: 252 KKYLVRKLGLSNEAEIDVYCMGQKLVHTQSLKQVRDGVWLPRLVESVNSAAGADERTTAD 311

Query: 214 FHH--CSHLMSLHYGTT 225
            HH    HL+SLHYG T
Sbjct: 312 CHHILTYHLLSLHYGRT 324

[Close]

BLAST of ClCG02G000200 vs. NCBI nr
Match: XP_015879615.1 (uncharacterized protein LOC107415739 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 139.4 bits (350), Expect = 3.8e-29
Identity = 76/138 (55.07%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 94  YNSSLTNFRLSSSSPSPNSAGFWFSLLSSPNRK---GGAALPQLPKPYIRVKDEKMTVLM 153
           Y+SS +N ++S+    PNS G WF+L +S NR+   GG  LPQ+PK YIRVKDE +TV M
Sbjct: 192 YSSSSSNIKIST---RPNS-GLWFTLSASTNRREREGGGGLPQVPKAYIRVKDENVTVSM 251

Query: 154 VKKYLLTKLGLSNQAQVELWCMGERLLQTQSLKQVRDGIWVPKLVEFLNSNSSLS--TSS 213
           VKKYL+ KLGLSN+A+++++CMG++L+ TQSLKQVRDG+W+P+LVE +NS +     T++
Sbjct: 252 VKKYLVRKLGLSNEAEIDVYCMGQKLVHTQSLKQVRDGVWLPRLVESVNSAAGADERTTA 311

Query: 214 IFHH--CSHLMSLHYGTT 225
             HH    HL+SLHYG T
Sbjct: 312 DCHHILTYHLLSLHYGRT 325

[Close]

BLAST of ClCG02G000200 vs. ExPASy Swiss-Prot
Match: G3XKQ9 (Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14
Identity = 42/111 (37.84%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 112 SAGFWFSLLSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAQVELWC 171
           +AG WF L ++P +     LPQ+P+ Y+R+KD ++TV ++ KYL+ KLGL ++++VE+ C
Sbjct: 284 AAGVWFVLQAAPLQGREPFLPQIPRSYLRIKDGRVTVRLLTKYLVNKLGLEDESEVEITC 343

Query: 172 MGERLLQTQSLKQVRDGIWVPKLVEFLNSNSSLSTSSIFHHCSHLMSLHYG 223
            G +LL   +L+ VRD IW  +  + ++ +++    +  HH  H+M L YG
Sbjct: 344 RGRQLLPILTLQHVRDSIWCRR--DAVSPSAAPDIPTADHH-QHIMVLQYG 391

[Close]

BLAST of ClCG02G000200 vs. ExPASy Swiss-Prot
Match: Q9M9Y4 (E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 2.2e-11
Identity = 33/90 (36.67%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 104 SSSSPSPNSAGFWFSLLSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSN 163
           SS+     +   WFSL++S +++GG +LPQ+P  ++R++D   TV  ++KYL+ KL L +
Sbjct: 300 SSAKQERRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLES 359

Query: 164 QAQVELWCMGERLLQTQSLKQVRDGIWVPK 194
           + ++E+ CMGE ++ T +L  + D +W+ K
Sbjct: 360 ENEIEIKCMGEAVIPTLTLYNLVD-LWLQK 388

[Close]

BLAST of ClCG02G000200 vs. ExPASy Swiss-Prot
Match: Q94AY3 (E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.2e-11
Identity = 34/93 (36.56%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 116 WFSLLSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAQVELWCMGER 175
           WFSL++S N++G A+LPQ+P  Y+R++D  + V  ++KYL+ KL L ++ +VE+ CMGE 
Sbjct: 311 WFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEVEITCMGEP 370

Query: 176 LLQTQSLKQVRDGIWVPKLVEFLNSNSSLSTSS 209
           ++ T  L  + D +W+    +     +S+ +S+
Sbjct: 371 VIPTLQLHSLVD-LWLETTSKHQRVAASIGSSA 402

[Close]

BLAST of ClCG02G000200 vs. ExPASy Swiss-Prot
Match: Q9LS86 (Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At3g23060 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06
Identity = 39/115 (33.91%), Postives = 56/115 (48.70%), Query Frame = 0


Query: 111 NSAGFWFSLLSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAQVELW 170
           N+   WFSL  S  +     LP +    IRVKD  MTV  +KKYL+ KLGL ++ QVE+W
Sbjct: 361 NNNPVWFSLKPSKTQNIEMLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQVEIW 420

Query: 171 CMGERLLQTQSLKQVRDGIWVPKLVEFLNSNSSLSTSSIFHHCSHLMSLHYGTTS 226
              E +  + +L  + D  W  +        S++  SS       +M L+Y   S
Sbjct: 421 LRDEPVCSSLTLHNLVD--WWVQTTPLPERQSAMVGSSA---AEFIMDLYYSFKS 470

[Close]

BLAST of ClCG02G000200 vs. ExPASy TrEMBL
Match: A0A6J1F0B3 (protein LAX PANICLE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111438321 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.2e-60
Identity = 145/228 (63.60%), Postives = 168/228 (73.68%), Query Frame = 0


Query: 1   MGSPCSHDQWLELSLGLKGRKKKLQEKEEEETKLYCQNTSHEHLDEEINENCLELRLQIG 60
           MGSP S  +WLELSLGL+G KKK +E ++EE ++        +L EE   + L LRLQIG
Sbjct: 1   MGSPGS-KEWLELSLGLRGTKKKQEEAKKEEDEM--------NLGEEGEGSSLSLRLQIG 60

Query: 61  PN-RNYNMGLMDLMYHQNKKKQKGAFQSDCYYNYYNSSLTNFRLSSSSPSPNSAGFWFSL 120
           P   + NMG+M  M  QN   QK AF S    N+      +F   SS P PN AG WFSL
Sbjct: 61  PKCFDTNMGIMGFMSTQN--NQKWAFHSHSLTNF-----PHFHGLSSPPPPNPAGLWFSL 120

Query: 121 LSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAQVELWCMGERLLQT 180
            SSPNRKGGA LPQ+PK YIRVKDEKMTVLMVKKYLLTKLGLS+QA+VELWCMGERLLQT
Sbjct: 121 RSSPNRKGGAPLPQIPKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEVELWCMGERLLQT 180

Query: 181 QSLKQVRDGIWVPKLVEFLNSNSSLSTSSIFHHCSHLMSLHYGTTSFF 228
           QSLKQVRDG+W+PKLVEF+NSNSSLSTS++F   ++LM LHYGTT  F
Sbjct: 181 QSLKQVRDGVWLPKLVEFVNSNSSLSTSTMF-QTTYLMCLHYGTTCLF 211

[Close]

BLAST of ClCG02G000200 vs. ExPASy TrEMBL
Match: A0A6P3ZLP7 (uncharacterized protein LOC107415739 isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC107415739 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29
Identity = 76/137 (55.47%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 94  YNSSLTNFRLSSSSPSPNSAGFWFSLLSSPN--RKGGAALPQLPKPYIRVKDEKMTVLMV 153
           Y+SS +N ++S+    PNS G WF+L +S N  R+GG  LPQ+PK YIRVKDE +TV MV
Sbjct: 192 YSSSSSNIKIST---RPNS-GLWFTLSASTNREREGGGGLPQVPKAYIRVKDENVTVSMV 251

Query: 154 KKYLLTKLGLSNQAQVELWCMGERLLQTQSLKQVRDGIWVPKLVEFLNSNSSLS--TSSI 213
           KKYL+ KLGLSN+A+++++CMG++L+ TQSLKQVRDG+W+P+LVE +NS +     T++ 
Sbjct: 252 KKYLVRKLGLSNEAEIDVYCMGQKLVHTQSLKQVRDGVWLPRLVESVNSAAGADERTTAD 311

Query: 214 FHH--CSHLMSLHYGTT 225
            HH    HL+SLHYG T
Sbjct: 312 CHHILTYHLLSLHYGRT 324

[Close]

BLAST of ClCG02G000200 vs. ExPASy TrEMBL
Match: A0A6P3ZIQ0 (uncharacterized protein LOC107415739 isoform X1 OS=Ziziphus jujuba OX=326968 GN=LOC107415739 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29
Identity = 76/138 (55.07%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 94  YNSSLTNFRLSSSSPSPNSAGFWFSLLSSPNRK---GGAALPQLPKPYIRVKDEKMTVLM 153
           Y+SS +N ++S+    PNS G WF+L +S NR+   GG  LPQ+PK YIRVKDE +TV M
Sbjct: 192 YSSSSSNIKIST---RPNS-GLWFTLSASTNRREREGGGGLPQVPKAYIRVKDENVTVSM 251

Query: 154 VKKYLLTKLGLSNQAQVELWCMGERLLQTQSLKQVRDGIWVPKLVEFLNSNSSLS--TSS 213
           VKKYL+ KLGLSN+A+++++CMG++L+ TQSLKQVRDG+W+P+LVE +NS +     T++
Sbjct: 252 VKKYLVRKLGLSNEAEIDVYCMGQKLVHTQSLKQVRDGVWLPRLVESVNSAAGADERTTA 311

Query: 214 IFHH--CSHLMSLHYGTT 225
             HH    HL+SLHYG T
Sbjct: 312 DCHHILTYHLLSLHYGRT 325

[Close]

BLAST of ClCG02G000200 vs. ExPASy TrEMBL
Match: A0A2I4DPI0 (uncharacterized protein LOC108982202 OS=Juglans regia OX=51240 GN=LOC108982202 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.8e-27
Identity = 69/115 (60.00%), Postives = 87/115 (75.65%), Query Frame = 0


Query: 113 AGFWFSLLSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAQVELWCM 172
           +G WFSL SS NR  G ALPQ+PK YIRVKDE +TV MVKKYL+TKLGLSN+A++++ CM
Sbjct: 171 SGLWFSLRSSTNR-DGEALPQIPKAYIRVKDENVTVFMVKKYLVTKLGLSNEAEIDISCM 230

Query: 173 GERLLQTQSLKQVRDGIWVPKLVEFLNSN-SSLSTSSIFHHCSHLMSLHYGTTSF 227
           G+ LL TQ+LK+VRD +WVP+L+E +NS   SL   S+     HLMSLHY   S+
Sbjct: 231 GQNLLHTQTLKEVRDAVWVPRLLESVNSTILSLEDYSLDMSSKHLMSLHYERRSY 284

[Close]

BLAST of ClCG02G000200 vs. ExPASy TrEMBL
Match: A0A6P4PK13 (uncharacterized protein LOC108478946 isoform X1 OS=Gossypium arboreum OX=29729 GN=LOC108478946 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25
Identity = 66/123 (53.66%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 113 AGFWFSLLSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAQVELWCM 172
           +G WF+L S  NR+ G ALPQ+PK YIRVKDE +T+ MVKKYL+ KLGLSN+A+VE+ CM
Sbjct: 171 SGLWFTLHSYTNRRNGEALPQIPKAYIRVKDENVTIFMVKKYLVRKLGLSNEAEVEISCM 230

Query: 173 GERLLQTQSLKQVRDGIWVPKLVEFLNSNSSLSTSSIFHHCS--------HLMSLHYGTT 228
           G+RL+ TQ+LKQVRD +W+P+ +E         + S FHH S        HLMSL+YG  
Sbjct: 231 GQRLVHTQTLKQVRDSVWLPRFLE---------SESTFHHYSLQTNSANNHLMSLYYGRR 284

[Close]

BLAST of ClCG02G000200 vs. TAIR 10
Match: AT5G13250.1 (RING finger protein )

HSP 1 Score: 79.7 bits (195), Expect = 3.3e-15
Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = 0


Query: 108 PSPNSAGFWFSLLSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQA-Q 167
           P    +G WF L +S N+     LPQ+PK Y+R+KD KMTV ++ KYL+ KL L +++ Q
Sbjct: 269 PRRPHSGIWFLLQASQNQTVEPFLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRLEHESQQ 328

Query: 168 VELWCMGERLLQTQSLKQVRDGIW-VPKLVEFLNSNSSLSTSSIFHHCSHLMSLHYGTT 225
           VE+ C G+ L    +L+ VRD IW   +    L+ N +L  +S      HLM LHYG T
Sbjct: 329 VEIRCRGQELEPVLTLQHVRDAIWRGSRDTSSLSQNITLLPNS--STSDHLMVLHYGRT 385

[Close]

BLAST of ClCG02G000200 vs. TAIR 10
Match: AT1G06770.1 (DREB2A-interacting protein 1 )

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12
Identity = 33/90 (36.67%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 104 SSSSPSPNSAGFWFSLLSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSN 163
           SS+     +   WFSL++S +++GG +LPQ+P  ++R++D   TV  ++KYL+ KL L +
Sbjct: 300 SSAKQERRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLES 359

Query: 164 QAQVELWCMGERLLQTQSLKQVRDGIWVPK 194
           + ++E+ CMGE ++ T +L  + D +W+ K
Sbjct: 360 ENEIEIKCMGEAVIPTLTLYNLVD-LWLQK 388

[Close]

BLAST of ClCG02G000200 vs. TAIR 10
Match: AT1G06770.2 (DREB2A-interacting protein 1 )

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12
Identity = 33/90 (36.67%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 104 SSSSPSPNSAGFWFSLLSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSN 163
           SS+     +   WFSL++S +++GG +LPQ+P  ++R++D   TV  ++KYL+ KL L +
Sbjct: 186 SSAKQERRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLES 245

Query: 164 QAQVELWCMGERLLQTQSLKQVRDGIWVPK 194
           + ++E+ CMGE ++ T +L  + D +W+ K
Sbjct: 246 ENEIEIKCMGEAVIPTLTLYNLVD-LWLQK 274

[Close]

BLAST of ClCG02G000200 vs. TAIR 10
Match: AT2G30580.1 (DREB2A-interacting protein 2 )

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12
Identity = 34/93 (36.56%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 116 WFSLLSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAQVELWCMGER 175
           WFSL++S N++G A+LPQ+P  Y+R++D  + V  ++KYL+ KL L ++ +VE+ CMGE 
Sbjct: 311 WFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEVEITCMGEP 370

Query: 176 LLQTQSLKQVRDGIWVPKLVEFLNSNSSLSTSS 209
           ++ T  L  + D +W+    +     +S+ +S+
Sbjct: 371 VIPTLQLHSLVD-LWLETTSKHQRVAASIGSSA 402

[Close]

BLAST of ClCG02G000200 vs. TAIR 10
Match: AT3G23060.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.1 bits (131), Expect = 8.7e-08
Identity = 39/115 (33.91%), Postives = 56/115 (48.70%), Query Frame = 0


Query: 111 NSAGFWFSLLSSPNRKGGAALPQLPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAQVELW 170
           N+   WFSL  S  +     LP +    IRVKD  MTV  +KKYL+ KLGL ++ QVE+W
Sbjct: 361 NNNPVWFSLKPSKTQNIEMLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQVEIW 420

Query: 171 CMGERLLQTQSLKQVRDGIWVPKLVEFLNSNSSLSTSSIFHHCSHLMSLHYGTTS 226
              E +  + +L  + D  W  +        S++  SS       +M L+Y   S
Sbjct: 421 LRDEPVCSSLTLHNLVD--WWVQTTPLPERQSAMVGSSA---AEFIMDLYYSFKS 470

The following BLAST results are available for this feature:

BLAST of ClCG02G000200 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571319.1	2.9e-61	64.04	Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022931988.1	2.4e-60	63.60	protein LAX PANICLE 2-like [Cucurbita moschata]	[more]
KAE8652308.1	2.1e-32	57.69	hypothetical protein Csa_022227 [Cucumis sativus]	[more]
XP_015879616.1	3.8e-29	55.47	uncharacterized protein LOC107415739 isoform X2 [Ziziphus jujuba]	[more]
XP_015879615.1	3.8e-29	55.07	uncharacterized protein LOC107415739 isoform X1 [Ziziphus jujuba]	[more]

BLAST of ClCG02G000200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
G3XKQ9	1.2e-14	37.84	Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1	[more]
Q9M9Y4	2.2e-11	36.67	E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 ...	[more]
Q94AY3	2.2e-11	36.56	E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 ...	[more]
Q9LS86	1.2e-06	33.91	Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At...	[more]

BLAST of ClCG02G000200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F0B3	1.2e-60	63.60	protein LAX PANICLE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111438321 PE=4 SV...	[more]
A0A6P3ZLP7	1.8e-29	55.47	uncharacterized protein LOC107415739 isoform X2 OS=Ziziphus jujuba OX=326968 GN=...	[more]
A0A6P3ZIQ0	1.8e-29	55.07	uncharacterized protein LOC107415739 isoform X1 OS=Ziziphus jujuba OX=326968 GN=...	[more]
A0A2I4DPI0	3.8e-27	60.00	uncharacterized protein LOC108982202 OS=Juglans regia OX=51240 GN=LOC108982202 P...	[more]
A0A6P4PK13	1.2e-25	53.66	uncharacterized protein LOC108478946 isoform X1 OS=Gossypium arboreum OX=29729 G...	[more]

BLAST of ClCG02G000200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13250.1	3.3e-15	42.02	RING finger protein	[more]
AT1G06770.1	1.5e-12	36.67	DREB2A-interacting protein 1	[more]
AT1G06770.2	1.5e-12	36.67	DREB2A-interacting protein 1	[more]
AT2G30580.1	1.5e-12	36.56	DREB2A-interacting protein 2	[more]
AT3G23060.1	8.7e-08	33.91	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 70..197 e-value: 5.0E-9 score: 37.9
None	No IPR available	PANTHER	PTHR47290:SF6	SUBFAMILY NOT NAMED	coord: 112..224
IPR044171	Protein LAX PANICLE 2-like	PANTHER	PTHR47290	RING FINGER PROTEIN	coord: 112..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G000200.2	ClCG02G000200.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development