ClCG01G024920 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G024920
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1
Location	CG_Chr01: 37969980 .. 37983688 (-)
RNA-Seq Expression	ClCG01G024920
Synteny	ClCG01G024920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCAATCGACACGGCTGGGCCACACCAAGAAATCGCCGAAGATCAAGTTAATGCGGGAACAGTCTGGCTGAAGAAATGCGACCAGAATTTTAGATTGAATACACAAATGGAAGGTCCCATAAACATCAACGAATCGGGAAGGACCGAGAACGAAGCTGTCATGTTAGATTGTGAAGTAACCCGTGAAATGAAAATAAGAACATTTTGAGGGACTGAAATGTAAAATAACTTCCACTAAGCTTTTGGTTGGTAGGGGTACAATTCCAATTTTGATCAATATTCTCACCCAATCAAATTACTTTAAGTAAATCCTGCTCTTTTTGTCCGATTGTAATTAAATGTTTATATTCCTATTAGATTTTATACCCATTCTGTTCGTAAAGCTTTGTTACGGCAAACATCTCAACAAAATGTTCAAACTTCCAAAATTAAATTAATAAAACTATATTTTCAATATTAATATTTTGTTCAACTAAAAACAAAATAAAACGCAAATTGTTAAATTCAATCATACTCCAAAAAATTTTAATTTCCAGCTTTTTCTTCTTCTTTTTTTTTTTTTCTCAACAAATAAACCGTTATGAACAAACTTTTGCTCGTTGTCTTAAATATAAAGTTAAATTCATATTGTCAAATTATGGCACGTTGATTATAAGACTAATGTTTCTTCGCAAAATCGAAAAAGCTCTCAACTTTTTATGACGAATTCAAATGTATTATTAATTTATCCAAATAAAAATCTAACATGTAAAATTAGAAAAGTAATTTAACAATTTCACATAAAAGAATAATTGTGTTATAAGTTTAGTCCACAAAATTTGATGTTTGTGTCTATTTGTTATTTGAAATTTTAAAAGTATCTACTAAATTCATAAACTTTCAATTTAGTGTTAAATAGGCTACTAACAAATCCAATTTTTTCGTACAATACATAAATTTGCGCCCTATATTTAGTAGAATTCTATAATTTTCATTTTGTGTTTAGAATATTCGCAAATTTAAAATCTTAAAAGTTCACAACGTAAATAGATACCATCCTTTAAGGATTTGTAATTATGTATATATATATTGCCTAAATAGATATCGACCCAAATTATATGGAAGAGAATGTCTTTTGCCTTAAATATATTTATCTTACTACTTACAAATTTCAATTAAGTAATCTAAAATTGGAAAACAGTTTGTTTTACATAGGTCAGCAATATGTATATTCTTATGCTAATAATATAAATAACCATACATGGTCAAGAGTTGATACCATTTAAATTTATAATTAAAGTGGACGTTTTTTTCCTAAAGAAATAATTAAAAGTGATATTGACTTTTTAGAAATATAAGCAAATAAATAAGCGACCTTTCAGATTTGAATCAACCGTCAAATGATATAATAATTCGACTGACTTACGAAATTTTATTTGGTCAACAAGTCTATATTTGACTGGCAGCACCATCTATTTTGACTTGCATTCACTATGTTAGCCTATAATATAATTATTGCTCACATGCCAACTAAAAAGCAGATATTTGGGTGCATTTTTTTTTATGTAATTAGCTTAAATATTCAATTACAAGTTGTCATATATATCTATATTGTATATTGTTTCTTTATGTGATTGCAATGGGACTCATAAAGATAGATGTTGACCAAAGTATCACTGAAAAATAGACAGATTGTTCATGTGTTTTTTTTTTCTTGTTGATATTTATGTTCCTCCTAAGTTTGGAGGGTTGTATCAATTGAGACTCCAAAAGAATAAACTTTTTTTAAAAATTTATCTTTATGTTGGATTATTAGATTGAGTTTCATAATTAAAGATTTAAAAATAGGCTTTAAGTTGAAAAATTAAAATCCAACCTGAAAAATATCATTGGCGTGTCTCCTCGCATGTCTGGAAACGAATACACTTATTCAATAATAACAATAATAATAATAATAAATTAGATACTTTGTTTCACGTGTCTGACACACACGTCCCACGTATCTAGACATATCAAAATTAGATACATATATGATATTGATTATATGCACATTTTGAAGTATACTTCAACAGCTTTATGTTTAAACTAACGAGACCTCCAAAATTTAGATGTACACAGATTGTCTTTTTTCCTTTTTTTTTCCTTCGACATATAGATCAAGTAATTTAAACTTCTAATCTCTTAGTCAATAATAAATGTCTCGATCTGTTAGAATCAACTTGAGATTAACCAATTCATATGCAATTGGTATGTATTTAAAATATATTTGATTATTGAATATTCCAAATATCATTTGACTATGTAACACACTTTGTGTGTCCAGGGTTATATTATATGTTCCAATCCTAACACATATGGCTTGTGAAATCTATGAACGACGATTTTATTTTGTTTTATTATTATTCTTTTTCTAGCAACATTCTCTCAAATTAACTCTTATATATATTAAAAGAAGAAGACGAAGAATGAGGGAAATAAATAAATAAATAAAATCGACTGAATTTATATTTTAAGTTGGAATCCTAAAACTGTTTTTCGAAGTTGAATAATCATGGGGCAAAAAGTAGAGAGGCAACGTTCAATCTCTTAATCGTCGGGTTGTGTTTATATTAACAACTTGAATTTTGTATTTATGTTTATAGTTTTACTGTTTAAAGTTGATGATATTTGATATTAAATTGTTAACTTTACATTATGATATATGTTCGTTTCTAAGCTAGATTCTGTTTGGTAATAATTTCGTTTTTAATTTTTTAAAATTAAGCCTAATTTCTCAAAATTTTTTACTATGATTTGCATATTTATTAATTACAATAGTTGAGTTATTAGTTAAATTATGATAACAAAAACAAAATTTTAAAAGCTATTTTTTTTAGTTTTCAAAACTTAGCTTGGTTTTTTAAACAATTGGTAAAAGTTATACAATAGAGAAATTTTTTTTGAAATGGAAGTAGTATCTATAGGCTTGATTTTAAAAAACAAAAACAAAATACGACATAACTACAAAACGGGACATTAATTAATATGATTTAATGTTACTTTCAACTTAAGGTATTATAGTTTTAAGATGAGCATCGTTAATAATAGTCCACAAGTCATTGTTTACCCAAGTCGAATGCTTTTTAAGTTTATCGTTCTTTTATGACTCTACGCACCACAATAATCTAATAGGAAATAACAATAATAATAATAATAAAAATTGCAACGCTTATGATATATTAACAACTCGTACTCATATAAACATGGTATCCATACAGATAATGAGATGACTAAACTAGCATCTTACGAGCTTAAAAGAAATAAAAATCTTTAAATATAAACTAAAATTAAAAAAGTTGGTAATCATCAACTTAAAACACTTAACTCATCGCATACACACACATGGTTGAAGTTTATGAATGCATGTGAATTTTATGAATTATGACATAACTACTCAATGATTAGTTTATAGCTTCGATGTAGGGGATGTTGGCATATATTTGTGGGAAATATGATTGATTGATTTTTGAGATATGGGTCAAAAGTTATTGCCTTTCAAGGTTTCAATTCGATCGTAAAAAAGTATGATAGCTTAACTAAGATTCTTGAGATTAGTATGACCGTGCAACGTCTCGATACATTGATCACTTACCGAATTAAGTGAAGAACCATTTTGTCTCTCGAGGGTCTATTTAAATTAGTGCCAGACGTATTTTTTATTTTTTTCCCATAGTTTTGGTTAGGGTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTAAATTAATTAAAAATAAAAAATTATGGGCGATGCACGGAGTATTTTTCAAATCGAATTTCGGATCCTTTTAACCTTATCCACTACTAAAACCTTGTTCAATTTATTTTCACTTTGCCTCTCGGGGCAGCAGGAGCGCGAAAATCCTCATCTCGGCCCCCCCTAAAATTCTCCGGTGATCTCAATCAAAATTCCACCGGAGTTGACCGCAGCCGGACTTATTTGCTCCACTGTTTAACCGTGAGTTTCGCATTCCAGGCCTCTTTTTAGTTACATGTTAGTAGCCTCTCAAATTTCGTAAAATGGACGATGATTTGTTTGTTTGTTGGACAATGTTATGGTTTTCTGGCTTCATTATGGTCGAGTTATCTGTGTAATTCTGCAACAGAATCGTTTAATGAAGATCGTGTAAACGACTTCCCGAGAACAATGGTTTTCCCATGATTTGTAGTATTTCACAGTGTTGTAATGAGTAAACATGTGCAGGTATACGTGTATATACGGTTTCTTCTGTGTTGGATATGGCTTCCCTGTCTACTCCATGCCTTTATCCTGGTTTGTTACCGTTATCCAGATTATGATTTGTAGTTTTAACGTTGATCAAATTAACCGTACAGAATTTGTTAGTTTGTTATAAGCCAGCAAAGAATGGGATTGATTTCTATCACTCTAAAGATATTGAATTGCAGAGAGAGGACGCAATGGAGTATTTTATGCTAATAGATGTGTTGGCGGGAAACCTTTATCAAATTACCTGAAGGTTAGCAGTTTTCTCATTTCATGATTGCAGTTTTTTTCTCCCTAGTGTAAGAATGGTTTTATCTTAGCTCATCATTTTTGCCACCAGTCTTAAACGCATGTTAATTTTCTGTTGAATGTCCAGACATGGTTTGTAGGTTCATTTCCAGTACGACTACTGCTGGTTGGAAATGCCTTGAACAAATCACTGCAGAGAAATCAGTTGGTTCCTTGCATCAATTGTGAGAATAGGGACGAATCCTATCAAGATGTATCGGTGGAGCGCCCGCCATACCATAGTTACATGGACTCAACTTCAGGGCAGCTTGAACCAGCTTCAGGGGCACGTGCAAGTATTCCAGGAGAGGAATACTGGCCAGAAGGAACTGCTAGTCGTGTTAGAGCTGCAAGGGCTCCCGAACCAACTGGTGCATCTGTGGGATCTCCATCTTATGGCCAAAATCCAGGAAGTAGGAGAAAGAAGAATAGAACACTAGCAGCTGTTGCTCATGATTCATCCGAAGTGACTGAAGTAGATTCAAGTGACCTAGTGATCTCTGACATTTCCGAGGATTTAATAGAGGAGCCTAAAGATGCTACTTCGCAGTATGTTGTTTATCAGACAGAACCTGATGAGGAAGAAACTGGGTTTGATTTAGACAAAAAACTTGGGAATCCCCACCCATTCATTGACCCTGCAAAGAAGAAGCCAATAGAGGAGCCACGTACAAGCGAAGAACTTTGGTGGAATTGGAGAAAGCCAGAAAAAGAGCAATGGTCTAGGTGGCAAAGGAGGAAACCTGATGTTGAAACGGTTAGTCTGTATGCAAAGAAAGGGAATAGTGAATGTTGAACAATGACTTTGCATATGTTCTCGCATTGCGTTGAGTGGAATTTGAACCTCTCCATGCAAAGGATACCTTGTGATGCAAAATATATTTGGAACCATAAATATTAAGTGTGAATACAGCATTCGAGTCATAGATTATTTCCAATTGCTTGTCTTCACTTAAATCTTGACTGTTATTGTATATATGCACATATTTTGTGGATCAGCGACTGATATTTGATGCTTGCATAGATATAGCAAAGCGGTGTTAATTAGGATTGCAGATGTGTGTGTCTGTGTTTTCCCCTCTCTATACATAAATAGAATCCGCCAACCTTGAAAGTGCTCTTCTTTGATCTAATTTTCTTGCACTTAATAACTAGATGAGGGCACCATGCACAATCTACAACTTGTTTAAATGAGGAAAAGTGGCTTCAAATCTTTATATTGCCCTTCTTTGTTTATAATGTCTGTAGGTTTTTCTCAAAGCAATGGCAGAGACTGGGCAGATAAAGCTGTATGGTGAACATCCAACACTAACTGAAGCTTCTCTGTACAGGGCTAGGCGACATCTTTACAAGGAAGAAAGGTTTTCTGTCCTAGCTTGAGTGATATGATACATAAGTTGTCATTTATCTCAACCAAGCATACTTAGTTAGACTAGCTTAGGATGTACAGAATGTTAGCAGCTGAAATATATTCTCAAAGTTAATTAGGAGTCTAGAATGTATGCAGCTTATACTTTTATTAGATTCAAGTATAGGGAAGATAAATGGCGTATATCTTTGAGCAGGCCGAAACTTTAATTTGGTTCTTTTCTTTCTTATTTGAATTAGGTCTCAACTATCATAGGTTTACCCAGTAGAGAAGATGAAAAAATTAAATGGCTACGAGGGAATGAATTTATGGCCATCCTAGGATTCTTTGTTTGGTAGTCTATCTATCTAGGATTTGATATCCTATTAGTATCTTTTGCAACCAAGTATAGTTGTTCTATGAGATTAGTCTAGATGCACGTAAGATTGGCCCTAGCCGTCATGGGCATAAAAAACAATTGGATGAGACCTCAACAAGACTCAAAGATATGATTCATATAGAAGCATCATGCTCAATGGAGTATATAGAATTTGGAACACTATTGGACACTTTGAACTTTTAAGTTTTCTTTCTTTCTTTTTTGAAAGATGCTAGTTGATTCTATTTTGATGCTCAGTAATTCTGTCTCGATTCTTATTTCATGTTCTTACAAAATATTTTCCAACAACATTGCTGGTGTGAGAATATTTTCCCTGCTGTTGATTGAGGTACATTTGACAACAAAAATAAATTCTATCTTTATGGGCTTAAAGCCAAACAAGACTGCTTGTGCACCTCCATAGCTTAGGAACATTTTAGTAATAAGTATTCTATCTTTTCAGACTTCAAGCTGAACAGGAGAGATTGGAAAGAATAGGTCCCATAGCATTCTACTCAGAATGGGTCAAAGCTTGGAAGAGGGATACCTCAAAGGATGCCATAAAAAAACATTTTGAAGAGACTGGAGAAGATGAAAACACCCAAATGATCGAAATGTTTCAAAATCAAACAGAGAGAGAGTTTCGAATTATGATGGGGACTGATATTCGCATTCGCAGGGACCCATTGGCAATGCGCATGCGAGAAGATCAGATTAAGCAAAGTATGCACTCCAATGCTGATAAGTTTGTGTGGTATTTCAAATTTATTCATCGATTGTCATGTTGTTCTATCATTGCAATTTCGTGCACCAATTTTTTCCAACTGTAAAAAATTGGGTTTCATCCCATTCCTTTCCTTAAAATGCACGTTTTTAAATTTTGGTTTTCATAGCTTTTACCACCAACTTCCCTTGGGTTCGGTTCTCAATATTTTGATGACTTGGAATTCAAAGTATTTGTAATTGTTTCTTATCCAAAAAAAAAAAAAAATCTGTTGCAGTATCAGATTACCCAGTACGTTCTCTCCTGATTATTTGGATAGATGATGTTCTTCTAAGTAAATTGCATTCTTTCAAATTCATCCACGGTCTCTTTTTTTTTGTTTTTTTTCTTGGGTAGTAATCTAATTTAGTCTGTTGTTGGCCTTTGCAGTATGGGGTGGCGACCCTGTGTACCCTACCATCAACTACATTCAAGATCCTAATGAAATAATTGATTATAGGGGTCCAGATTTTCACGAACCAACACCTGACATGCTAGATTTTCTGAAGGAGGTTGCTTTACTTTGCTTATTATTTTTCAAGTTGCTTTTCACTCTCTCCACCAATATTGTGTGATTCAGTTGGGTCGAAGATTGTGAGTGTTGGACCAGATTAGATATCATTCCTAGGTTCAAAACACCAAATATAAAGCTCAAGGGGAAATCTATTGTTGCGTGGGACTGGGGAGCAGGTAGTAGGGTGCATTATGCTCTCCGATTGATTAGTGGGATGATGAACTGTCAGTTTAAGAATATGAATTTGACAACATTCATTCCTTGGATGTGAACTTTTTGTCTATTTCAAATGTAATTCTTTTCAACCCAGTGCCATTTTCTTCACATTTGATCATTAGTGCATACATACACCTTAATCAATCTCATAGCCAACCTAATTTAGTCAGTTGTTGGCCTTTGTAAATCAATCTCATTAGTGCATACATACAGTTTAATCGATTTCTTCACACGATATTTTCTATGCCCAAAATATTGCAATATTAGATAGTAAACGAGATTGGGAAAAAAAATCAATCTCATAACACTACTATCTAAAGTTGCAATATTTTGGACAGAAATTTATAGCATCTCTAAATCCTAAATTGGTCGCCATCAGTATTTGAAACCCTTAAATTTTGTAAAGATTTGTAGTTTGTCCTTTGCACCTTTGACCAACCAAGTATTCACGACTGGAGCTGACCAACTAGTTCTCTTGTTTTAATTGTGTCTTTGGCCTCAAAATCATATGAGCTGCAACTTATTCATTGGCTTGATATCTAAAATTCAACTACCATAACTTTTGATAGTGGACCTAGAGTTATTTGTGTAGGTTTTTAAGCGCAGTAGAAATTGCTAGTCATATGTTATATCAGCCAAACCCATAGCACCCTTCAAGTATCCCCTATATGAGAATTTTCTTATAAAAGTTTTATTTTTTTAATAAACTAGTGAGCAGCTGCTAGCTGTTGGACTAAGCCAAGCTCAAGGCATCCGAAGGTGTTCTCATTCTAGTTTCTTATCAATTTCTCTTTTAATGATATTTGAATTAATTGGGTGCTTTTATATCCCATCCATATAATATTTCTGTTTTTGTTCATCTTCATGAAATTTTGTATCCTCTTAAAGAAAACACTATTTAGCAACTGCTGGAGTAGAGTATATAATTCACAACATAAGGTACTGACCTTTTCCTTGTTCCCTTTTTCAATCAGCACGGTAAAATTATTTCAAGAGAGGAGCTTGAGGAAATTCTGGCCAAAGAAAAAAACGAGGAGCTTGAGGTATTTACATTACAGCATTTGGCATATTGGTTCTAGCAAGAAATTCAAGTTTGATACAATATTCTACATCCAACTAGAGAACATATAGATAATCTTTGGCTGCAATCTGCTTATCATGTCTATTTTACTATGATAAAGGCAAGTGCTAGTGCTCTCACTCTCATTTGGTATTTCTTTCACCGTTTCTTAACTGAAAGGTATCTCCTTCTATTTGTTGAATCCTAAAAAGTGCAAATGAAAAGGTCACTTTGCGCAAGTAAGAAAACTGACCTAGATATTTTTTGTTACCATCAGACAAAATTTAGCTAAAGTAGAAAAGTTCAATTCTGAATCTATTGGTGTATTGGAAGGTCAATCAGCCGCCCTGATGATGCTGTGCTTAATTTTGGAGTTTCAGATCTTTGTTTCTCTCTGGCTCCACATTATTGTTCATCCACATCCCCATTTATCTAAATGGCGATTTTTCCCTTCTGCCCCAATAACTGTAAATTTTGTCATTCAATTTACTTGAAATAATCTAGAAAATTTAAATTATTTGAAAGAAAAGCTAATTCTTGAATTCTTTCAATCATTATTTTTTCCCCAAAAGAAGTGCTTTGTGAAATGTTTATAAAATTCCAAGTTACAAGTAGCCAGTGTTTGTAGTGGATTGGGCCTTTATACGCTCACCTTTGTTTTCCAGATTTACTTGTTTGTTTGATTAACCAGTAAAGTTGATTTGCAACATGATTAAACAGAATTCCAAAATTGAACTATATTGCCGAAGTAGATTTTGTGGAAGAGTTTTATTTAATATTATTTTTGTTTGTGCGTTTGCTTGCTTAAAGCAGACTGATGGGCGAATTTATTAAGCTTCCCTTTAACTTCTTTTGAAGTATCCCAGAGAAGGGCTTAGCTCATGATCGGTAAAAGATTTACGACATATATTAGTAACTATACACCAAACTAAAACCATTGAATCGTTTTGATTTTTAATAACATAGCAAAAGCCTCACATATAAGCGTCTTCAGCCCCATTGAGTATTTGTGGGGATCGGTGGTCTATGGGGAAATTAATTGTTGGTTTCTGGAGTTAAAACATGGAGTTTTTGGAATTGTGTTCTTTTAGTTCTAGTATTCATTATGATGGATGATTATCCTTTTTGTGGACAGTTAACGTTCTAATTTTTGGGGAGGACTTCCTCGTTATGTACAACTTTTATCCTTGACTCTGTTTTTTTGATCTTTGGATAAAATAAATGTTTACATTTTGCATGGTCTAATATCCTCTTATGTTATAAATTGTCATCAATTAGCCTTATGGACAACATTAGAATCCCCAGCTTTCGATGAAGCCTTTCTTCCCTTGTAATTTATAAAGCCTAGGTTTTTAAATTTCCTTTCACGTTTTGTCAACCATTTCAACAGATGAGGCATGGAGGATTAAATAATCTAGCAATATCTTAGGTTGAGTTTAAAGCCACTCTTCCTAAGTTTTCTTCTCGCAATGGTGCATTTTGGAGGAGGACCTGGATACTGTTTTTGGGATTTTGCCTGTTTGCCCTTTAACTTCTGCTGGATGAAATTGTTTGGTGTCTGTTGGTTCAAAATACAGTTGGTAGGGTTCAGCTGGAGGAGATGTTTTTGAGTTCTTTCATTAGGGAGGATGACCTGGATATTGTTTTTGGGATTGCCTGTTTGCCCTTTAACTTCTGCTGGATGAGTTTGTTTGGTGTCTGTTGGGTTCGAAATATAGTTGGTAGGGCTCGGCTGGAGGAGATGTTTTTGAGTTTTTTCATTAGGGAGAAGAGTAAAGTTGTGGTAGGGTAGCTTTATTGCAATTTTGTGGGGATTTGGATTTGAGTGGAATGATAGAATTTTTAGGGAGGAGAGATTGGGTGAAGAAGTTTGGAAGGTGGTTAGGTTTAATGCCTCTTTATGGGCATTGGCCTAGGTCTTTTTGTAATTATGAGATCGGTCTTGTTCTTTTGGATTTAAGTCATTTTTTATAGTTAGGGTCGCACTCTCTTTCTTTGTTGGAGCTTGTGTATTATTTATTTATCTTTTGGTGTGGCCTTGTGTATTCTTTCATTTCACTCAATGAAAGTGCGGTTTCTTATCAAAATGAGACCTTTACTCTTCTCCATCAAGGAATAAGCTAAGCTTGGATACATCAAGACCATAAGTTTAGGCCACGGTTTGCATTGTAGGTTTAGGTGATTGCCCCATGTGAGATGCTCATCAATATTGGAAACTGACAATTATCTCAGTTATGAGAGAAATATTAACGTGAAAGAAAAATAACCAATCAGAATGAAGAATAGCCTGAAAAAATTGACGAACGTTGAAATTGATGTATTATCTCATTTTACAAAACAGGTGACGGATATGGATGATGCCATGGCTCAAGCTATTGATATTGGTGAAAATGACGTGAGTTCGTGCTCCCTCCATGTCCTTCATTTTTTTTATTTTTGTTGTTTAGTACATGTTATCTTGCATTGATGCTTCTTACAGCCAGAATTTTTATCAGTAAGATATGGTATAACTAAATGGAGGCAAAACTAACACATATATTAAATAATAATATCAAATTACATTAAACTTGATGTCACTATTAAATAAATATAAAAAATCATTTACTGAAAACTAAAGATCTCTAAGATCACACTATAAGTGAAAACATAACCAGAGCTAAATTGAGTTCTTAAATTGAGACTCAAACTTTAACTGCTCAAGCCAAGCAATATTGTAACGTCAATTTTATTTCCGCATGATTCAAACATTTTTATTAGAAAAGAACATTTTATTCATCAGTAGTAGCAGGTTTCATTTTAACAAATCCATTATGTGAAATAAGAAGAATGGCGATATTTAGGTTAGTTCACCTTCCAGTAGGTTAACTTGGCTATAGTCTTTATACATGGTATCAATTCTATTGGTGATTTCTCCAATTGTAAATGAATCAACTTCATTTTCAATTTCTCTTTAGGATGGAGAGGACAGCGAGGCTGAGGGCGATGAAGAGGCGGAGGAAAAAATCACACGCAACTGGAGTGTCTTGAAAAGCAGTCCCCATCTCAACAACCCAAAGGTGATTAAACTCATTTTGTTCTCAATTTGTGGTTGTGTGCGCACTAGAAGACCCATACTTTCGTGTTGATAGTTATATTTTATATGTTGAATGTCTTTCCCTTTTCATGCATGACCTAAATTCAGAAATGATATGAATTCGAAAATCTCAGTGCTATGCTAATACAGAAGCAATAGAAGTCATCAATACATATTGAAGACTCAAGTAAATATATACATATGATCATCTAAACTATTAGTTTTTATCTTTGGTTTTCAGTTTGGAAAACTCTGATTTTGATCCTGCACATTTTATCCGTTTGAGCTGCAAAAGAAAATAAACATGTTACGAGGTTCCTTACCTAGGATTTAATATCCTACAAGTTTTCTTGACACCCAAATGTTGTGAGATCAGGTGGGTTGTCCCGTGAGATTAGTCGAGGTGCACATAAGCTGGCCCGACACTCACGGATATAAAAGAAAAAACATGTTACACAAGGAAAAACTAGGAATATCTCTCATATTTGGTTTTTCAATTCAGTTGAAGTTGCAATTGCAGTTCTAACTCAACTATGAGTTAATTTTTGGAGTGATTGTTTTTTGGTTAAACTACAAGTTTAGTCCTAGAATTTTAAAAATGTTCAACTTCCAATTTTGTCCTAATGAATCCCTAAGTGAGTCCTGACATATTGAAATTTTTTAGGAATCAAAGAGATATAAAATTGAATGTTAGGTATAATGAAATCCAAATTTTTTAATTTTATCTAATAGATCCGTGAGTTTTAAAAGATATTAAATATTTCAAGGACCTATTATTATGTAAAAGTGAAAGATATAATTGGTCTATTTCCGTTTCCGTTTATATTCTTGTAATGAATAAACTATGCTACATTTTTAATAGATTCTCTGAAATTTATTTATTAGAATAACTATTTTGAACTTAAAAAACTGTTTGGAAAGTTCGTATATTTTTTGTGCTTTTATTTATATCTTCTTAATTATATAATAATATATTTTGATCAAATTTACGTGAAAAACAGTTAAAAAATTGTTTTAGAAAGTATTTTCCCTCGTTTGGACCATGTACTAACTTTATGTGCCTCACGAGTTCATCACCCCAATGTTTGTCTGAAAATGCAGGGGAAACCTAAAAAGGAGGATCCTGCATCACTGGAGGGAGCCATCGATGATTCTGAGAACCTGACAGATTTCCTTATGGACTTCGAAGAAGATGAGTGATGATTCTTTCCTCTTTGAACTTCTAATATAAAGCTTCTACTTCCTAGCTAGCTAGCCCCTGCATAATCTATTAGAGAAACCTATTAGATTGAATTTCTTGATCTGTCTGTTAAAGTTTTGATTTCACGAGAATCGTTAGTATTATTTTATTGATAGTGATTAGTAAGCTGAGCTTTCTACCATTTTAACCCGCTAATTTCTTTAGTTTTTTATATTTGTAAATAATTTAACTCATAA

mRNA sequence

ATGAAACCAATCGACACGGCTGGGCCACACCAAGAAATCGCCGAAGATCAAGTTAATGCGGGAACAGTCTGGCTGAAGAAATGCGACCAGAATTTTAGATTGAATACACAAATGGAAGGTATACGTGTATATACGGTTTCTTCTGTGTTGGATATGGCTTCCCTGTCTACTCCATGCCTTTATCCTGAGAGAGGACGCAATGGAGTATTTTATGCTAATAGATGTGTTGGCGGGAAACCTTTATCAAATTACCTGAAGACATGGTTTGTAGGTTCATTTCCAGTACGACTACTGCTGGTTGGAAATGCCTTGAACAAATCACTGCAGAGAAATCAGTTGGTTCCTTGCATCAATTGTGAGAATAGGGACGAATCCTATCAAGATGTATCGGTGGAGCGCCCGCCATACCATAGTTACATGGACTCAACTTCAGGGCAGCTTGAACCAGCTTCAGGGGCACGTGCAAGTATTCCAGGAGAGGAATACTGGCCAGAAGGAACTGCTAGTCGTGTTAGAGCTGCAAGGGCTCCCGAACCAACTGGTGCATCTGTGGGATCTCCATCTTATGGCCAAAATCCAGGAAGTAGGAGAAAGAAGAATAGAACACTAGCAGCTGTTGCTCATGATTCATCCGAAGTGACTGAAGTAGATTCAAGTGACCTAGTGATCTCTGACATTTCCGAGGATTTAATAGAGGAGCCTAAAGATGCTACTTCGCAGTATGTTGTTTATCAGACAGAACCTGATGAGGAAGAAACTGGGTTTGATTTAGACAAAAAACTTGGGAATCCCCACCCATTCATTGACCCTGCAAAGAAGAAGCCAATAGAGGAGCCACGTACAAGCGAAGAACTTTGGTGGAATTGGAGAAAGCCAGAAAAAGAGCAATGGTCTAGGTGGCAAAGGAGGAAACCTGATGTTGAAACGGTTTTTCTCAAAGCAATGGCAGAGACTGGGCAGATAAAGCTGTATGGTGAACATCCAACACTAACTGAAGCTTCTCTGTACAGGGCTAGGCGACATCTTTACAAGGAAGAAAGACTTCAAGCTGAACAGGAGAGATTGGAAAGAATAGGTCCCATAGCATTCTACTCAGAATGGGTCAAAGCTTGGAAGAGGGATACCTCAAAGGATGCCATAAAAAAACATTTTGAAGAGACTGGAGAAGATGAAAACACCCAAATGATCGAAATGTTTCAAAATCAAACAGAGAGAGAGTTTCGAATTATGATGGGGACTGATATTCGCATTCGCAGGGACCCATTGGCAATGCGCATGCGAGAAGATCAGATTAAGCAAATATGGGGTGGCGACCCTGTGTACCCTACCATCAACTACATTCAAGATCCTAATGAAATAATTGATTATAGGGGTCCAGATTTTCACGAACCAACACCTGACATGCTAGATTTTCTGAAGGAGCACGGTAAAATTATTTCAAGAGAGGAGCTTGAGGAAATTCTGGCCAAAGAAAAAAACGAGGAGCTTGAGGCAAGTGCTAGTGCTCTCACTCTCATTTGGTATTTCTTTCACCGTTTCTTAACTGAAAGACAAAATTTAGCTAAAGTAGAAAAGTTCAATTCTGAATCTATTGGTGTATTGGAAGGTCAATCAGCCGCCCTGATGATGCTGTGCTTAATTTTGGAGTTTCAGATCTTTGTTTCTCTCTGGCTCCACATTATTGTTCATCCACATCCCCATTTATCTAAATGGCGATTTTTCCCTTCTGCCCCAATAACTGTGACGGATATGGATGATGCCATGGCTCAAGCTATTGATATTGGTGAAAATGACGATGGAGAGGACAGCGAGGCTGAGGGCGATGAAGAGGCGGAGGAAAAAATCACACGCAACTGGAGTGTCTTGAAAAGCAGTCCCCATCTCAACAACCCAAAGGGGAAACCTAAAAAGGAGGATCCTGCATCACTGGAGGGAGCCATCGATGATTCTGAGAACCTGACAGATTTCCTTATGGACTTCGAAGAAGATGAGTGATGATTCTTTCCTCTTTGAACTTCTAATATAAAGCTTCTACTTCCTAGCTAGCTAGCCCCTGCATAATCTATTAGAGAAACCTATTAGATTGAATTTCTTGATCTGTCTGTTAAAGTTTTGATTTCACGAGAATCGTTAGTATTATTTTATTGATAGTGATTAGTAAGCTGAGCTTTCTACCATTTTAACCCGCTAATTTCTTTAGTTTTTTATATTTGTAAATAATTTAACTCATAA

Coding sequence (CDS)

ATGAAACCAATCGACACGGCTGGGCCACACCAAGAAATCGCCGAAGATCAAGTTAATGCGGGAACAGTCTGGCTGAAGAAATGCGACCAGAATTTTAGATTGAATACACAAATGGAAGGTATACGTGTATATACGGTTTCTTCTGTGTTGGATATGGCTTCCCTGTCTACTCCATGCCTTTATCCTGAGAGAGGACGCAATGGAGTATTTTATGCTAATAGATGTGTTGGCGGGAAACCTTTATCAAATTACCTGAAGACATGGTTTGTAGGTTCATTTCCAGTACGACTACTGCTGGTTGGAAATGCCTTGAACAAATCACTGCAGAGAAATCAGTTGGTTCCTTGCATCAATTGTGAGAATAGGGACGAATCCTATCAAGATGTATCGGTGGAGCGCCCGCCATACCATAGTTACATGGACTCAACTTCAGGGCAGCTTGAACCAGCTTCAGGGGCACGTGCAAGTATTCCAGGAGAGGAATACTGGCCAGAAGGAACTGCTAGTCGTGTTAGAGCTGCAAGGGCTCCCGAACCAACTGGTGCATCTGTGGGATCTCCATCTTATGGCCAAAATCCAGGAAGTAGGAGAAAGAAGAATAGAACACTAGCAGCTGTTGCTCATGATTCATCCGAAGTGACTGAAGTAGATTCAAGTGACCTAGTGATCTCTGACATTTCCGAGGATTTAATAGAGGAGCCTAAAGATGCTACTTCGCAGTATGTTGTTTATCAGACAGAACCTGATGAGGAAGAAACTGGGTTTGATTTAGACAAAAAACTTGGGAATCCCCACCCATTCATTGACCCTGCAAAGAAGAAGCCAATAGAGGAGCCACGTACAAGCGAAGAACTTTGGTGGAATTGGAGAAAGCCAGAAAAAGAGCAATGGTCTAGGTGGCAAAGGAGGAAACCTGATGTTGAAACGGTTTTTCTCAAAGCAATGGCAGAGACTGGGCAGATAAAGCTGTATGGTGAACATCCAACACTAACTGAAGCTTCTCTGTACAGGGCTAGGCGACATCTTTACAAGGAAGAAAGACTTCAAGCTGAACAGGAGAGATTGGAAAGAATAGGTCCCATAGCATTCTACTCAGAATGGGTCAAAGCTTGGAAGAGGGATACCTCAAAGGATGCCATAAAAAAACATTTTGAAGAGACTGGAGAAGATGAAAACACCCAAATGATCGAAATGTTTCAAAATCAAACAGAGAGAGAGTTTCGAATTATGATGGGGACTGATATTCGCATTCGCAGGGACCCATTGGCAATGCGCATGCGAGAAGATCAGATTAAGCAAATATGGGGTGGCGACCCTGTGTACCCTACCATCAACTACATTCAAGATCCTAATGAAATAATTGATTATAGGGGTCCAGATTTTCACGAACCAACACCTGACATGCTAGATTTTCTGAAGGAGCACGGTAAAATTATTTCAAGAGAGGAGCTTGAGGAAATTCTGGCCAAAGAAAAAAACGAGGAGCTTGAGGCAAGTGCTAGTGCTCTCACTCTCATTTGGTATTTCTTTCACCGTTTCTTAACTGAAAGACAAAATTTAGCTAAAGTAGAAAAGTTCAATTCTGAATCTATTGGTGTATTGGAAGGTCAATCAGCCGCCCTGATGATGCTGTGCTTAATTTTGGAGTTTCAGATCTTTGTTTCTCTCTGGCTCCACATTATTGTTCATCCACATCCCCATTTATCTAAATGGCGATTTTTCCCTTCTGCCCCAATAACTGTGACGGATATGGATGATGCCATGGCTCAAGCTATTGATATTGGTGAAAATGACGATGGAGAGGACAGCGAGGCTGAGGGCGATGAAGAGGCGGAGGAAAAAATCACACGCAACTGGAGTGTCTTGAAAAGCAGTCCCCATCTCAACAACCCAAAGGGGAAACCTAAAAAGGAGGATCCTGCATCACTGGAGGGAGCCATCGATGATTCTGAGAACCTGACAGATTTCCTTATGGACTTCGAAGAAGATGAGTGA

Protein sequence

MKPIDTAGPHQEIAEDQVNAGTVWLKKCDQNFRLNTQMEGIRVYTVSSVLDMASLSTPCLYPERGRNGVFYANRCVGGKPLSNYLKTWFVGSFPVRLLLVGNALNKSLQRNQLVPCINCENRDESYQDVSVERPPYHSYMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGASVGSPSYGQNPGSRRKKNRTLAAVAHDSSEVTEVDSSDLVISDISEDLIEEPKDATSQYVVYQTEPDEEETGFDLDKKLGNPHPFIDPAKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEHPTLTEASLYRARRHLYKEERLQAEQERLERIGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPNEIIDYRGPDFHEPTPDMLDFLKEHGKIISREELEEILAKEKNEELEASASALTLIWYFFHRFLTERQNLAKVEKFNSESIGVLEGQSAALMMLCLILEFQIFVSLWLHIIVHPHPHLSKWRFFPSAPITVTDMDDAMAQAIDIGENDDGEDSEAEGDEEAEEKITRNWSVLKSSPHLNNPKGKPKKEDPASLEGAIDDSENLTDFLMDFEEDE

Homology

[Close]

BLAST of ClCG01G024920 vs. NCBI nr
Match: XP_038883750.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Benincasa hispida])

HSP 1 Score: 978.8 bits (2529), Expect = 2.4e-281
Identity = 511/613 (83.36%), Postives = 518/613 (84.50%), Query Frame = 0


Query: 52  MASLSTPCLYPERGRNGVFYANRCVGGKPLSNYLKTWFVGSFPVRLLLVGNALNKSLQRN 111
           MASLSTPCLYP+RG NGVFYAN CVGGK LSN+LKT FVGSFPV LLL GNALNK LQRN
Sbjct: 1   MASLSTPCLYPDRGWNGVFYANGCVGGKSLSNFLKTPFVGSFPVGLLLAGNALNKPLQRN 60

Query: 112 QLVPCINCENRDESYQDVSVERPPYHSYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 171
           QLVPCI  ENRDESY+DVSVERPPYHSYMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIKGENRDESYEDVSVERPPYHSYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 172 RAARAPEPTGASVGSPSYGQNPGSRRKKNRTLAAVAHDSSEVTEVDSSDLVISDISEDLI 231
           RAARAPEPTGASVGSPSYGQNPGSRRKKNRTLAAVAHDSSEVTEVDSSDLVISDISEDLI
Sbjct: 121 RAARAPEPTGASVGSPSYGQNPGSRRKKNRTLAAVAHDSSEVTEVDSSDLVISDISEDLI 180

Query: 232 EEPKDATSQYVVYQTEPDEEETGFDLDKKLGNPHPFIDPAKKKPIEEPRTSEELWWNWRK 291
           EEPKDATSQYVVY+TEPDEEETGFDLDKKLGNPHPFIDP KKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDATSQYVVYRTEPDEEETGFDLDKKLGNPHPFIDPVKKKPIEEPRTSEELWWNWRK 240

Query: 292 PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEHPTLTEASLYRARRHLYKEERLQAE 351
           PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEHPTLTEASLYRARRHLYKEERLQAE
Sbjct: 241 PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEHPTLTEASLYRARRHLYKEERLQAE 300

Query: 352 QERLERIGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFRIMM 411
           QERLERIGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFRIMM 360

Query: 412 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPNEIIDYRGPDFHEPTPDMLDF 471
           GTDIRIRRDPLAMRM+EDQIKQIWGGDPVYPTINYIQDPNEIIDYRGPDFHEPTPDMLDF
Sbjct: 361 GTDIRIRRDPLAMRMQEDQIKQIWGGDPVYPTINYIQDPNEIIDYRGPDFHEPTPDMLDF 420

Query: 472 LKEHGKIISREELEEILAKEKNEELEASASALTLIWYFFHRFLTERQNLAKVEKFNSESI 531
           LKEHGKIISREEL+EILAKEKNEELE                                  
Sbjct: 421 LKEHGKIISREELQEILAKEKNEELE---------------------------------- 480

Query: 532 GVLEGQSAALMMLCLILEFQIFVSLWLHIIVHPHPHLSKWRFFPSAPITVTDMDDAMAQA 591
                                                            VTDMDDAMAQA
Sbjct: 481 -------------------------------------------------VTDMDDAMAQA 530

Query: 592 IDIGENDDGEDSEAEGDEEAEEKITRNWSVLKSSPHLNNPKGKPKKEDPASLEGAIDDSE 651
           IDIGENDDGEDSE EGDEEAEEKITRNWSVLKSSPHLN PKGKPKKEDPASLEGAID+SE
Sbjct: 541 IDIGENDDGEDSEVEGDEEAEEKITRNWSVLKSSPHLNKPKGKPKKEDPASLEGAIDNSE 530

Query: 652 NLTDFLMDFEEDE 665
           NLTDFLMDFEEDE
Sbjct: 601 NLTDFLMDFEEDE 530

[Close]

BLAST of ClCG01G024920 vs. NCBI nr
Match: KAA0052516.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 [Cucumis melo var. makuwa] >TYK13309.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 971.1 bits (2509), Expect = 4.9e-279
Identity = 508/641 (79.25%), Postives = 527/641 (82.22%), Query Frame = 0


Query: 28  CDQNFRLNTQM-EGIRVYTVSSVLDMASLSTPCLYPERGRNGVFYANRCVGGKPLSNYLK 87
           C  + R N ++  GIRVYT SS L+MASLSTPCLYP+RGRNGVFYAN C+GGKPLSN+LK
Sbjct: 7   CTSSQRCNEKICAGIRVYTGSSELEMASLSTPCLYPDRGRNGVFYANGCIGGKPLSNFLK 66

Query: 88  TWFVGSFPVRLLLVG---NALNKSLQRNQLVPCINCENRDESYQDVSVERPPYHSYMDST 147
           T FVGSFPVRLLLVG   NALNKS QRNQLVPCI CENRDESY+DV+VERPPYH+YMDST
Sbjct: 67  TPFVGSFPVRLLLVGNAANALNKSPQRNQLVPCIKCENRDESYEDVTVERPPYHTYMDST 126

Query: 148 SGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGASVGSPSYGQNPGSRRKKNRTL 207
           SGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTG S+GSPSYGQNPGSRRKKNRTL
Sbjct: 127 SGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGVSMGSPSYGQNPGSRRKKNRTL 186

Query: 208 AAVAHDSSEVTEVDSSDLVISDISEDLIEEPKDATSQYVVYQTEPDEEETGFDLDKKLGN 267
           AA AHDSSEVTEV SSDLVIS+ISED IEEPKD TSQYVVYQTEPDEE TGFDLDKK+GN
Sbjct: 187 AAAAHDSSEVTEVQSSDLVISEISEDFIEEPKDDTSQYVVYQTEPDEEVTGFDLDKKVGN 246

Query: 268 PHPFIDPAKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKL 327
           PHPFIDP KKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKL
Sbjct: 247 PHPFIDPEKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKL 306

Query: 328 YGEHPTLTEASLYRARRHLYKEERLQAEQERLERIGPIAFYSEWVKAWKRDTSKDAIKKH 387
           YGE PTLTE SLYRARRHLYKEERLQAE+ERLER GPIAFYSEWVKAWKRDTSKDAIKKH
Sbjct: 307 YGEQPTLTEVSLYRARRHLYKEERLQAEEERLERTGPIAFYSEWVKAWKRDTSKDAIKKH 366

Query: 388 FEETGEDENTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPT 447
           FEETGEDENTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPT
Sbjct: 367 FEETGEDENTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPT 426

Query: 448 INYIQDPNEIIDYRGPDFHEPTPDMLDFLKEHGKIISREELEEILAKEKNEELEASASAL 507
           +NYIQDPNEIIDYRGPDFHEPTPDMLDFLKEHGKIISREEL+EILAKEKNEELE      
Sbjct: 427 VNYIQDPNEIIDYRGPDFHEPTPDMLDFLKEHGKIISREELQEILAKEKNEELE------ 486

Query: 508 TLIWYFFHRFLTERQNLAKVEKFNSESIGVLEGQSAALMMLCLILEFQIFVSLWLHIIVH 567
                                                                       
Sbjct: 487 ------------------------------------------------------------ 546

Query: 568 PHPHLSKWRFFPSAPITVTDMDDAMAQAIDIGENDDGEDSEAEGDEEAEEKITRNWSVLK 627
                            VTDMDDAMAQAIDIGENDDGEDSE E DEEAEEKITRNWSVLK
Sbjct: 547 -----------------VTDMDDAMAQAIDIGENDDGEDSEVERDEEAEEKITRNWSVLK 564

Query: 628 SSPHLNNPKGKPKKEDPASLEGAIDDSENLTDFLMDFEEDE 665
           SSPHLN  KGKP K+DPASL+GAID+SENLTDFLMDFEEDE
Sbjct: 607 SSPHLNKQKGKPNKKDPASLDGAIDESENLTDFLMDFEEDE 564

[Close]

BLAST of ClCG01G024920 vs. NCBI nr
Match: XP_011658302.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Cucumis sativus] >KGN49432.1 hypothetical protein Csa_003582 [Cucumis sativus])

HSP 1 Score: 957.2 bits (2473), Expect = 7.3e-275
Identity = 495/613 (80.75%), Postives = 511/613 (83.36%), Query Frame = 0


Query: 52  MASLSTPCLYPERGRNGVFYANRCVGGKPLSNYLKTWFVGSFPVRLLLVGNALNKSLQRN 111
           MASLSTPCLYP+RGRNGVFYAN CVGGKPLSN+LKT F+GSFPVRLLLVGNALNKS QRN
Sbjct: 1   MASLSTPCLYPDRGRNGVFYANGCVGGKPLSNFLKTPFIGSFPVRLLLVGNALNKSPQRN 60

Query: 112 QLVPCINCENRDESYQDVSVERPPYHSYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 171
           QLVPCI CENRDESY+DV+VERPPYH+YMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIRCENRDESYEDVTVERPPYHTYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 172 RAARAPEPTGASVGSPSYGQNPGSRRKKNRTLAAVAHDSSEVTEVDSSDLVISDISEDLI 231
           RAARAPEPTG S+GSPSYGQNPGSRRKKNRTLAA AHDSSEVTEVDSSDLVIS+ISED I
Sbjct: 121 RAARAPEPTGTSMGSPSYGQNPGSRRKKNRTLAAAAHDSSEVTEVDSSDLVISEISEDFI 180

Query: 232 EEPKDATSQYVVYQTEPDEEETGFDLDKKLGNPHPFIDPAKKKPIEEPRTSEELWWNWRK 291
           EEPKD TSQYVVYQTEPDEE TGFDLDKK GNPHPFIDP KKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDDTSQYVVYQTEPDEEVTGFDLDKKTGNPHPFIDPKKKKPIEEPRTSEELWWNWRK 240

Query: 292 PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEHPTLTEASLYRARRHLYKEERLQAE 351
           PEKEQWSRWQRRKPDVETVFLKAMA+TGQIKLYGE PTLTE SLYRARRHLYKEERLQAE
Sbjct: 241 PEKEQWSRWQRRKPDVETVFLKAMAQTGQIKLYGEQPTLTEVSLYRARRHLYKEERLQAE 300

Query: 352 QERLERIGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFRIMM 411
           QERLERIGPIAFYSEWVK WKRDTSKDAI+KHFEETGEDENTQMIEMFQNQTEREFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIRKHFEETGEDENTQMIEMFQNQTEREFRIMM 360

Query: 412 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPNEIIDYRGPDFHEPTPDMLDF 471
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPT+NYIQDPNEIIDYRGPDFHEPTP MLDF
Sbjct: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFHEPTPGMLDF 420

Query: 472 LKEHGKIISREELEEILAKEKNEELEASASALTLIWYFFHRFLTERQNLAKVEKFNSESI 531
           LKEHGKIISREEL+EILAKEKNEELE                                  
Sbjct: 421 LKEHGKIISREELQEILAKEKNEELE---------------------------------- 480

Query: 532 GVLEGQSAALMMLCLILEFQIFVSLWLHIIVHPHPHLSKWRFFPSAPITVTDMDDAMAQA 591
                                                            VTDMDDAMAQA
Sbjct: 481 -------------------------------------------------VTDMDDAMAQA 530

Query: 592 IDIGENDDGEDSEAEGDEEAEEKITRNWSVLKSSPHLNNPKGKPKKEDPASLEGAIDDSE 651
           IDIGENDDGEDSE EGDEEAEEKITRNWSVLKSSPHL+  KGKP K+DPASL+GAID+SE
Sbjct: 541 IDIGENDDGEDSEVEGDEEAEEKITRNWSVLKSSPHLSKQKGKPNKKDPASLDGAIDESE 530

Query: 652 NLTDFLMDFEEDE 665
           NLTDFLMDFEEDE
Sbjct: 601 NLTDFLMDFEEDE 530

[Close]

BLAST of ClCG01G024920 vs. NCBI nr
Match: XP_008439585.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 [Cucumis melo])

HSP 1 Score: 953.7 bits (2464), Expect = 8.1e-274
Identity = 496/616 (80.52%), Postives = 511/616 (82.95%), Query Frame = 0


Query: 52  MASLSTPCLYPERGRNGVFYANRCVGGKPLSNYLKTWFVGSFPVRLLLVG---NALNKSL 111
           MASLSTPCLYP+RGRNGVFYAN C+GGKPLSN+LKT FVGSFPVRLLLVG   NALNKS 
Sbjct: 1   MASLSTPCLYPDRGRNGVFYANGCIGGKPLSNFLKTPFVGSFPVRLLLVGNAANALNKSP 60

Query: 112 QRNQLVPCINCENRDESYQDVSVERPPYHSYMDSTSGQLEPASGARASIPGEEYWPEGTA 171
           QRNQLVPCI CENRDESY+DV+VERPPYH+YMDSTSGQLEPASGARASIPGEEYWPEGTA
Sbjct: 61  QRNQLVPCIKCENRDESYEDVTVERPPYHTYMDSTSGQLEPASGARASIPGEEYWPEGTA 120

Query: 172 SRVRAARAPEPTGASVGSPSYGQNPGSRRKKNRTLAAVAHDSSEVTEVDSSDLVISDISE 231
           SRVRAARAPEPTG S+GSPSYGQNPGSRRKKNRTLAA AHDSSEVTEV SSDLVIS+ISE
Sbjct: 121 SRVRAARAPEPTGVSMGSPSYGQNPGSRRKKNRTLAAAAHDSSEVTEVQSSDLVISEISE 180

Query: 232 DLIEEPKDATSQYVVYQTEPDEEETGFDLDKKLGNPHPFIDPAKKKPIEEPRTSEELWWN 291
           D IEEPKD TSQYVVYQTEPDEE TGFDLDKK+GNPHPFIDP KKKPIEEPRTSEELWWN
Sbjct: 181 DFIEEPKDDTSQYVVYQTEPDEEVTGFDLDKKIGNPHPFIDPEKKKPIEEPRTSEELWWN 240

Query: 292 WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEHPTLTEASLYRARRHLYKEERL 351
           WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGE PTLTE SLYRARRHLYKEERL
Sbjct: 241 WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLTEVSLYRARRHLYKEERL 300

Query: 352 QAEQERLERIGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFR 411
           QAE+ERLER GPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFR
Sbjct: 301 QAEEERLERTGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFR 360

Query: 412 IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPNEIIDYRGPDFHEPTPDM 471
           IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPT+NYIQDPNEIIDYRGPDFHEPTPDM
Sbjct: 361 IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFHEPTPDM 420

Query: 472 LDFLKEHGKIISREELEEILAKEKNEELEASASALTLIWYFFHRFLTERQNLAKVEKFNS 531
           LDFLKEHGKIISREEL+EILAKEKNEELE                               
Sbjct: 421 LDFLKEHGKIISREELQEILAKEKNEELE------------------------------- 480

Query: 532 ESIGVLEGQSAALMMLCLILEFQIFVSLWLHIIVHPHPHLSKWRFFPSAPITVTDMDDAM 591
                                                               VTDMDDAM
Sbjct: 481 ----------------------------------------------------VTDMDDAM 533

Query: 592 AQAIDIGENDDGEDSEAEGDEEAEEKITRNWSVLKSSPHLNNPKGKPKKEDPASLEGAID 651
           AQAIDIGENDDGEDSE E DEEAEEKITRNWSVLKSSPHLN  KGKP K+DPASL+GAID
Sbjct: 541 AQAIDIGENDDGEDSEVERDEEAEEKITRNWSVLKSSPHLNKQKGKPNKKDPASLDGAID 533

Query: 652 DSENLTDFLMDFEEDE 665
           +SENLTDFLMDFEEDE
Sbjct: 601 ESENLTDFLMDFEEDE 533

[Close]

BLAST of ClCG01G024920 vs. NCBI nr
Match: KAG6594437.1 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 952.6 bits (2461), Expect = 1.8e-273
Identity = 496/622 (79.74%), Postives = 514/622 (82.64%), Query Frame = 0


Query: 43  VYTVSSVLDMASLSTPCLYPERGRNGVFYANRCVGGKPLSNYLKTWFVGSFPVRLLLVGN 102
           ++T+SS L+MASLSTPCLYP+RGR GVFYAN CVGGKPLSN+ KT FVGSFPVRL+LVGN
Sbjct: 60  LFTLSSELEMASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGN 119

Query: 103 ALNKSLQRNQLVPCINCENRDESYQDVSVERPPYHSYMDSTSGQLEPASGARASIPGEEY 162
           AL KSLQRNQLVPCI CEN DESY+DVSVERPPYH YMDSTSGQLEPASGARASIPGEEY
Sbjct: 120 ALKKSLQRNQLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEY 179

Query: 163 WPEGTASRVRAARAPEPTGASVGSPSYGQNPGSRRKKNRTLAAVAHDSSEVTEVDSSDLV 222
           WPEGTASRVRAARAP PTGASVGSPSYGQ PGSRRKKNRT AAVA DSSEVTEVDSSD  
Sbjct: 180 WPEGTASRVRAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSE 239

Query: 223 ISDISEDLIEEPKDATSQYVVYQTEPDEEETGFDLDKKLGNPHPFIDPAKKKPIEEPRTS 282
           I DISEDLIEEPKDATSQYVVY+TEPD+EETGFDLDKKLGNPHPFIDP KKKPIEEPRTS
Sbjct: 240 IPDISEDLIEEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTS 299

Query: 283 EELWWNWRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEHPTLTEASLYRARRHL 342
           EELWWNWRKPEKEQWSRWQRRK DVETVFLKAMAETGQIKLYGEHPTLTE SLYRARRHL
Sbjct: 300 EELWWNWRKPEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHL 359

Query: 343 YKEERLQAEQERLERIGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQ 402
           +KEERLQAEQERLERIGPIAFYSEWVK WKRDTSKDAI+KHFEETGED+NTQMIEMFQNQ
Sbjct: 360 FKEERLQAEQERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQ 419

Query: 403 TEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPNEIIDYRGPDFH 462
           TEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPT+NYIQDPNEIIDYRGPDF 
Sbjct: 420 TEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFT 479

Query: 463 EPTPDMLDFLKEHGKIISREELEEILAKEKNEELEASASALTLIWYFFHRFLTERQNLAK 522
           EPTPDMLD+LKEHGKIISR ELEEILAKEKNEELE                         
Sbjct: 480 EPTPDMLDYLKEHGKIISRTELEEILAKEKNEELE------------------------- 539

Query: 523 VEKFNSESIGVLEGQSAALMMLCLILEFQIFVSLWLHIIVHPHPHLSKWRFFPSAPITVT 582
                                                                     VT
Sbjct: 540 ----------------------------------------------------------VT 598

Query: 583 DMDDAMAQAIDIGENDDGEDSEAEGDEEAEEKITRNWSVLKSSPHLNNPKGKPKKEDPAS 642
           D+DDAM+QAIDIGENDDGEDSE EGDEEAEEKITRNWSVLKSSPHLN  KGKPKKEDPAS
Sbjct: 600 DLDDAMSQAIDIGENDDGEDSEVEGDEEAEEKITRNWSVLKSSPHLNKSKGKPKKEDPAS 598

Query: 643 LEGAIDDSENLTDFLMDFEEDE 665
           LEGA+DDSENLTDFLMDFEEDE
Sbjct: 660 LEGAVDDSENLTDFLMDFEEDE 598

[Close]

BLAST of ClCG01G024920 vs. ExPASy Swiss-Prot
Match: F4IHY7 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC12 PE=1 SV=1)

HSP 1 Score: 617.5 bits (1591), Expect = 1.8e-175
Identity = 340/587 (57.92%), Postives = 402/587 (68.48%), Query Frame = 0


Query: 93  FPVRLLLVG-NALNKSLQRNQLVPCINCENRD-------------ESYQDVSVERPPYHS 152
           FP++ L  G  + ++SL+      CI C+  D             E ++ V+VER PYHS
Sbjct: 35  FPLKTLHAGITSRDRSLRH-----CIKCKKEDGDGDVSEGSKKSEEGFEYVTVERHPYHS 94

Query: 153 YMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGASVGSPSYGQNPGSRRK 212
           YMDSTSG+LEPASGARASIPGE+YWPEGT+SRVRAARAP+P G S   PSYG+NPGSRRK
Sbjct: 95  YMDSTSGKLEPASGARASIPGEDYWPEGTSSRVRAARAPQPAGESSSFPSYGKNPGSRRK 154

Query: 213 KNRTLAAVAHDSSEVTEVDSSDLVISDISEDLIEEPKDATSQYVVYQT--EPDEEETGFD 272
           KNR        + E   V+++D  +SD  +   EE  D++  +V Y+   E +EEETGF+
Sbjct: 155 KNRKA------TEENVTVETND-EVSDSEDSSEEEENDSSDGFVTYKNEFEREEEETGFE 214

Query: 273 LDKKLGNPHPFIDPAKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKPDVETVFLKAMA 332
           LDKKLG PHPFIDP KKK IE+  TS+E WWNWRKPEKEQWSRWQRR+PDVETVFLKAMA
Sbjct: 215 LDKKLGRPHPFIDPTKKKQIEKTLTSDESWWNWRKPEKEQWSRWQRRRPDVETVFLKAMA 274

Query: 333 ETGQIKLYGEHPTLTEASLYRARRHLYKEERLQAEQERLERIGPIAFYSEWVKAWKRDTS 392
           ETGQ+KLYGE PTLTE SLYRARRHL+KEERLQAE+ERL + GP+AFYSEWVKAWKRDTS
Sbjct: 275 ETGQVKLYGEEPTLTETSLYRARRHLFKEERLQAERERLAKEGPMAFYSEWVKAWKRDTS 334

Query: 393 KDAIKKHFEETGEDENTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWG 452
           ++A++KHFEETGEDENTQ+IEMF +QT+RE+RIMMGTDIRI+RDPLAMRMREDQIKQIWG
Sbjct: 335 REAVQKHFEETGEDENTQLIEMFSHQTDREYRIMMGTDIRIKRDPLAMRMREDQIKQIWG 394

Query: 453 GDPVYPTINYIQDPNEIIDYRGPDFHEPTPDMLDFLKEHGKIISREELEEILAKEKNEEL 512
           GDPVYPTINYIQDPN ++D+RGPDFHEPTP+ML +LKE+GK+ISRE  E +L KEK E+L
Sbjct: 395 GDPVYPTINYIQDPNAVMDFRGPDFHEPTPNMLSYLKENGKVISREMHEALLTKEKTEQL 454

Query: 513 EASASALTLIWYFFHRFLTERQNLAKVEKFNSESIGVLEGQSAALMMLCLILEFQIFVSL 572
           E                                                           
Sbjct: 455 E----------------------------------------------------------- 514

Query: 573 WLHIIVHPHPHLSKWRFFPSAPITVTDMDDAMAQAIDIGENDDGEDSEAEGDEEAEEKIT 632
                                   V DMDDAMAQA+DIGENDD ED      E+ +EK+ 
Sbjct: 515 ------------------------VPDMDDAMAQAVDIGENDDDEDD--ADVEKDDEKVP 524

Query: 633 RNWSVLKSSPHLNNPKGKPKKEDPASLEGAIDDSENLTDFLMDFEED 664
           RNWSVLK +P L   K KPKKE   SL+ A+DD+ENLTDFLMDFEE+
Sbjct: 575 RNWSVLKETPELRTAKPKPKKEGRMSLDEAVDDAENLTDFLMDFEEE 524

[Close]

BLAST of ClCG01G024920 vs. ExPASy Swiss-Prot
Match: Q0JIZ1 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PTAC12 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 3.2e-148
Identity = 295/552 (53.44%), Postives = 379/552 (68.66%), Query Frame = 0


Query: 122 RDES--YQDVSVERPPYHSYMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARAPEP 181
           +D+S  +    +E PPY SY DSTSGQLEPASGARASIPG+EYWPEGTASRVRAARAP P
Sbjct: 59  KDDSLHFDPSKIEAPPYSSYFDSTSGQLEPASGARASIPGQEYWPEGTASRVRAARAPAP 118

Query: 182 TGASVGSPSYGQNPGSRRK--KNRTLAAVAHDSSEVTEVDSSDLV-ISDISEDLIEEPKD 241
            G S G+PS+G+ PGSRRK  K +  +A A   +E +  +   +V I   S++ +EE KD
Sbjct: 119 VGESAGTPSFGKKPGSRRKGYKEQVASATAGRGTETSGDEGESVVAIEASSDETLEETKD 178

Query: 242 ATSQYVVYQTEPDEEETGFDLDKKLGNPHPFIDPAKKKPIEEPRTSEELWWNWRK--PEK 301
           +  +YVVY+   +E  + +++DK +G PHPF+DP K   + EP++SEELWWNWR+   E 
Sbjct: 179 SLDEYVVYEMPKEENLSEYEMDKMMGRPHPFVDPQKAMSVGEPKSSEELWWNWRRKSEEN 238

Query: 302 EQWSRWQRRKPDVETVFLKAMAETGQIKLYGEHPTLTEASLYRARRHLYKEERLQAEQER 361
           E WSRWQRR+PDV+TVF KAMAETGQIK++G+HPT TEA+L +ARRHL+KEERL+AEQ R
Sbjct: 239 EMWSRWQRRRPDVDTVFAKAMAETGQIKIFGDHPTRTEAALAKARRHLFKEERLEAEQRR 298

Query: 362 LERIGPIAFYSEWVKAWK-RDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFRIMMGT 421
           LE IGPIA+YSEWV+A+K +DTS++A++KHFEETGEDENTQ+I MFQ+QT  EFRIMMGT
Sbjct: 299 LEEIGPIAYYSEWVEAYKNKDTSREAVQKHFEETGEDENTQLITMFQHQTAGEFRIMMGT 358

Query: 422 DIRIRRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPNEIIDYRGPDFHEPTPDMLDFLK 481
           D+RI+RDPLAMRMREDQIKQIWGGDPVYPTINY+ DP+E+ DYRGP+FHEPTP+++ +L 
Sbjct: 359 DVRIQRDPLAMRMREDQIKQIWGGDPVYPTINYVHDPDEVADYRGPEFHEPTPEVVPYLM 418

Query: 482 EHGKIISREELEEILAKEKNEELEASASALTLIWYFFHRFLTERQNLAKVEKFNSESIGV 541
           EHG +I++EEL   L    NEE+E     +T        +L E                V
Sbjct: 419 EHGIMITKEELYARL----NEEMEDINQDIT--------YLPE----------------V 478

Query: 542 LEGQSAALMMLCLILEFQIFVSLWLHIIVHPHPHLSKWRFFPSAPITVTDMDDAMAQAID 601
            +  + A+                          + +  +   +     D D  +AQ   
Sbjct: 479 RDPMATAV-------------------------DIGEHSYNEDSDDDEEDADKVVAQPES 538

Query: 602 I-GENDDGEDSEAEGDEEAEEKITRNWSVLKSSPHLNNPKGKPKKEDPASLEGAIDDSEN 661
           +  + DDG+D+     E+AE K++RNWSVLK++    NPK K KK D  SL+ AI DSEN
Sbjct: 539 LEDDEDDGDDA-----EDAEGKVSRNWSVLKTTGQAENPKEKSKK-DQLSLKEAIADSEN 551

Query: 662 LTDFLMDFEEDE 665
           LTDFLMDFEEDE
Sbjct: 599 LTDFLMDFEEDE 551

[Close]

BLAST of ClCG01G024920 vs. ExPASy Swiss-Prot
Match: B4FZ81 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Zea mays OX=4577 GN=PTAC12 PE=1 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 7.2e-148
Identity = 291/557 (52.24%), Postives = 372/557 (66.79%), Query Frame = 0


Query: 117 INCENRDESYQDVS-VERPPYHSYMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAAR 176
           I C   D  + D S +E PPY SY DSTSGQLEPASGARASIPG+EYWPEGTA+RVRAAR
Sbjct: 57  IKCVKDDSLHFDPSKIEPPPYSSYFDSTSGQLEPASGARASIPGKEYWPEGTAARVRAAR 116

Query: 177 APEPTGASVGSPSYGQNPGSRRK--KNRTLAAVAHDSSEV---TEVDSSDLVISDISEDL 236
           AP P G S G PS+G  PGSRR+  K +  +A   + ++     + D  D+ I    +D 
Sbjct: 117 APAPVGESAGMPSFGTKPGSRRRGYKEQVTSASGTEGAQTDDRKDGDEPDVAIIGSGDDA 176

Query: 237 IEEPKDATSQYVVYQTEPDEEETGFDLDKKLGNPHPFIDPAKKKPIEEPRTSEELWWNWR 296
           +EE KD+  +YV+Y+T  +EE + +D+DK +G PHPFIDPAK   + EP+TSEELWW+WR
Sbjct: 177 LEEIKDSVDEYVIYETPEEEELSEYDMDKMMGRPHPFIDPAKAMSLGEPKTSEELWWHWR 236

Query: 297 K--PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEHPTLTEASLYRARRHLYKEERL 356
           +   E+E WSRWQRR+PDV+TVF KAMAETGQIK++G+HP+ TEA+L + RRHLYKEERL
Sbjct: 237 RKSQEEEMWSRWQRRRPDVDTVFAKAMAETGQIKIFGDHPSRTEAALAKTRRHLYKEERL 296

Query: 357 QAEQERLERIGPIAFYSEWVKAWK-RDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREF 416
           +AEQ RLE IGPIA+YSEWV+A+K +DTS++AI+KHFEETGEDEN Q+I+MFQ+QT  E+
Sbjct: 297 EAEQRRLEEIGPIAYYSEWVEAYKNKDTSREAIQKHFEETGEDENVQLIKMFQHQTAGEY 356

Query: 417 RIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPNEIIDYRGPDFHEPTPD 476
           RIMMGTD+RI+RDPLAMRMREDQIKQIWGGDPVYPTINY+QDP+E+IDYRGP+FHEPTP+
Sbjct: 357 RIMMGTDVRIQRDPLAMRMREDQIKQIWGGDPVYPTINYVQDPDEVIDYRGPEFHEPTPE 416

Query: 477 MLDFLKEHGKIISREELEEILAKEKNEELEASASALTLIWYFFHRFLTERQNLAKVEKFN 536
           ++ +L EHG +I++EEL   L +E+                               E  N
Sbjct: 417 VVPYLMEHGIMITKEELYARLNEER-------------------------------EDVN 476

Query: 537 SESIGVLEGQSAALMMLCLILEFQIFVSLWLHIIVHPHPHLSKWRFFPSAPITVTDMDDA 596
            +   + E +      +                       + +  +   +     D+D A
Sbjct: 477 QDITYIPEAKDPMATAI----------------------DIGEHSYNEDSDDEDEDVDKA 536

Query: 597 MAQAIDIGENDDGEDSEAEGDEEAEEKITRNWSVLKSSPHLNNPKGKPKKEDPASLEGAI 656
            AQ   + + +D  D  A    E EEK+ +NWS LKS+     PK K KK D  +L+ AI
Sbjct: 537 AAQPQSLEDEEDDRDDVA----EVEEKVNQNWSALKSTGQAEKPKEKSKK-DEMTLKEAI 555

Query: 657 DDSENLTDFLMDFEEDE 665
           DDSENLTDFLMDFEE E
Sbjct: 597 DDSENLTDFLMDFEETE 555

[Close]

BLAST of ClCG01G024920 vs. ExPASy TrEMBL
Match: A0A5D3CSY1 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009320 PE=4 SV=1)

HSP 1 Score: 971.1 bits (2509), Expect = 2.4e-279
Identity = 508/641 (79.25%), Postives = 527/641 (82.22%), Query Frame = 0


Query: 28  CDQNFRLNTQM-EGIRVYTVSSVLDMASLSTPCLYPERGRNGVFYANRCVGGKPLSNYLK 87
           C  + R N ++  GIRVYT SS L+MASLSTPCLYP+RGRNGVFYAN C+GGKPLSN+LK
Sbjct: 7   CTSSQRCNEKICAGIRVYTGSSELEMASLSTPCLYPDRGRNGVFYANGCIGGKPLSNFLK 66

Query: 88  TWFVGSFPVRLLLVG---NALNKSLQRNQLVPCINCENRDESYQDVSVERPPYHSYMDST 147
           T FVGSFPVRLLLVG   NALNKS QRNQLVPCI CENRDESY+DV+VERPPYH+YMDST
Sbjct: 67  TPFVGSFPVRLLLVGNAANALNKSPQRNQLVPCIKCENRDESYEDVTVERPPYHTYMDST 126

Query: 148 SGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGASVGSPSYGQNPGSRRKKNRTL 207
           SGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTG S+GSPSYGQNPGSRRKKNRTL
Sbjct: 127 SGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGVSMGSPSYGQNPGSRRKKNRTL 186

Query: 208 AAVAHDSSEVTEVDSSDLVISDISEDLIEEPKDATSQYVVYQTEPDEEETGFDLDKKLGN 267
           AA AHDSSEVTEV SSDLVIS+ISED IEEPKD TSQYVVYQTEPDEE TGFDLDKK+GN
Sbjct: 187 AAAAHDSSEVTEVQSSDLVISEISEDFIEEPKDDTSQYVVYQTEPDEEVTGFDLDKKVGN 246

Query: 268 PHPFIDPAKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKL 327
           PHPFIDP KKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKL
Sbjct: 247 PHPFIDPEKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKL 306

Query: 328 YGEHPTLTEASLYRARRHLYKEERLQAEQERLERIGPIAFYSEWVKAWKRDTSKDAIKKH 387
           YGE PTLTE SLYRARRHLYKEERLQAE+ERLER GPIAFYSEWVKAWKRDTSKDAIKKH
Sbjct: 307 YGEQPTLTEVSLYRARRHLYKEERLQAEEERLERTGPIAFYSEWVKAWKRDTSKDAIKKH 366

Query: 388 FEETGEDENTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPT 447
           FEETGEDENTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPT
Sbjct: 367 FEETGEDENTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPT 426

Query: 448 INYIQDPNEIIDYRGPDFHEPTPDMLDFLKEHGKIISREELEEILAKEKNEELEASASAL 507
           +NYIQDPNEIIDYRGPDFHEPTPDMLDFLKEHGKIISREEL+EILAKEKNEELE      
Sbjct: 427 VNYIQDPNEIIDYRGPDFHEPTPDMLDFLKEHGKIISREELQEILAKEKNEELE------ 486

Query: 508 TLIWYFFHRFLTERQNLAKVEKFNSESIGVLEGQSAALMMLCLILEFQIFVSLWLHIIVH 567
                                                                       
Sbjct: 487 ------------------------------------------------------------ 546

Query: 568 PHPHLSKWRFFPSAPITVTDMDDAMAQAIDIGENDDGEDSEAEGDEEAEEKITRNWSVLK 627
                            VTDMDDAMAQAIDIGENDDGEDSE E DEEAEEKITRNWSVLK
Sbjct: 547 -----------------VTDMDDAMAQAIDIGENDDGEDSEVERDEEAEEKITRNWSVLK 564

Query: 628 SSPHLNNPKGKPKKEDPASLEGAIDDSENLTDFLMDFEEDE 665
           SSPHLN  KGKP K+DPASL+GAID+SENLTDFLMDFEEDE
Sbjct: 607 SSPHLNKQKGKPNKKDPASLDGAIDESENLTDFLMDFEEDE 564

[Close]

BLAST of ClCG01G024920 vs. ExPASy TrEMBL
Match: A0A0A0KM32 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524690 PE=4 SV=1)

HSP 1 Score: 957.2 bits (2473), Expect = 3.6e-275
Identity = 495/613 (80.75%), Postives = 511/613 (83.36%), Query Frame = 0


Query: 52  MASLSTPCLYPERGRNGVFYANRCVGGKPLSNYLKTWFVGSFPVRLLLVGNALNKSLQRN 111
           MASLSTPCLYP+RGRNGVFYAN CVGGKPLSN+LKT F+GSFPVRLLLVGNALNKS QRN
Sbjct: 1   MASLSTPCLYPDRGRNGVFYANGCVGGKPLSNFLKTPFIGSFPVRLLLVGNALNKSPQRN 60

Query: 112 QLVPCINCENRDESYQDVSVERPPYHSYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 171
           QLVPCI CENRDESY+DV+VERPPYH+YMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIRCENRDESYEDVTVERPPYHTYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 172 RAARAPEPTGASVGSPSYGQNPGSRRKKNRTLAAVAHDSSEVTEVDSSDLVISDISEDLI 231
           RAARAPEPTG S+GSPSYGQNPGSRRKKNRTLAA AHDSSEVTEVDSSDLVIS+ISED I
Sbjct: 121 RAARAPEPTGTSMGSPSYGQNPGSRRKKNRTLAAAAHDSSEVTEVDSSDLVISEISEDFI 180

Query: 232 EEPKDATSQYVVYQTEPDEEETGFDLDKKLGNPHPFIDPAKKKPIEEPRTSEELWWNWRK 291
           EEPKD TSQYVVYQTEPDEE TGFDLDKK GNPHPFIDP KKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDDTSQYVVYQTEPDEEVTGFDLDKKTGNPHPFIDPKKKKPIEEPRTSEELWWNWRK 240

Query: 292 PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEHPTLTEASLYRARRHLYKEERLQAE 351
           PEKEQWSRWQRRKPDVETVFLKAMA+TGQIKLYGE PTLTE SLYRARRHLYKEERLQAE
Sbjct: 241 PEKEQWSRWQRRKPDVETVFLKAMAQTGQIKLYGEQPTLTEVSLYRARRHLYKEERLQAE 300

Query: 352 QERLERIGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFRIMM 411
           QERLERIGPIAFYSEWVK WKRDTSKDAI+KHFEETGEDENTQMIEMFQNQTEREFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIRKHFEETGEDENTQMIEMFQNQTEREFRIMM 360

Query: 412 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPNEIIDYRGPDFHEPTPDMLDF 471
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPT+NYIQDPNEIIDYRGPDFHEPTP MLDF
Sbjct: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFHEPTPGMLDF 420

Query: 472 LKEHGKIISREELEEILAKEKNEELEASASALTLIWYFFHRFLTERQNLAKVEKFNSESI 531
           LKEHGKIISREEL+EILAKEKNEELE                                  
Sbjct: 421 LKEHGKIISREELQEILAKEKNEELE---------------------------------- 480

Query: 532 GVLEGQSAALMMLCLILEFQIFVSLWLHIIVHPHPHLSKWRFFPSAPITVTDMDDAMAQA 591
                                                            VTDMDDAMAQA
Sbjct: 481 -------------------------------------------------VTDMDDAMAQA 530

Query: 592 IDIGENDDGEDSEAEGDEEAEEKITRNWSVLKSSPHLNNPKGKPKKEDPASLEGAIDDSE 651
           IDIGENDDGEDSE EGDEEAEEKITRNWSVLKSSPHL+  KGKP K+DPASL+GAID+SE
Sbjct: 541 IDIGENDDGEDSEVEGDEEAEEKITRNWSVLKSSPHLSKQKGKPNKKDPASLDGAIDESE 530

Query: 652 NLTDFLMDFEEDE 665
           NLTDFLMDFEEDE
Sbjct: 601 NLTDFLMDFEEDE 530

[Close]

BLAST of ClCG01G024920 vs. ExPASy TrEMBL
Match: A0A1S3AZS1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484338 PE=4 SV=1)

HSP 1 Score: 953.7 bits (2464), Expect = 3.9e-274
Identity = 496/616 (80.52%), Postives = 511/616 (82.95%), Query Frame = 0


Query: 52  MASLSTPCLYPERGRNGVFYANRCVGGKPLSNYLKTWFVGSFPVRLLLVG---NALNKSL 111
           MASLSTPCLYP+RGRNGVFYAN C+GGKPLSN+LKT FVGSFPVRLLLVG   NALNKS 
Sbjct: 1   MASLSTPCLYPDRGRNGVFYANGCIGGKPLSNFLKTPFVGSFPVRLLLVGNAANALNKSP 60

Query: 112 QRNQLVPCINCENRDESYQDVSVERPPYHSYMDSTSGQLEPASGARASIPGEEYWPEGTA 171
           QRNQLVPCI CENRDESY+DV+VERPPYH+YMDSTSGQLEPASGARASIPGEEYWPEGTA
Sbjct: 61  QRNQLVPCIKCENRDESYEDVTVERPPYHTYMDSTSGQLEPASGARASIPGEEYWPEGTA 120

Query: 172 SRVRAARAPEPTGASVGSPSYGQNPGSRRKKNRTLAAVAHDSSEVTEVDSSDLVISDISE 231
           SRVRAARAPEPTG S+GSPSYGQNPGSRRKKNRTLAA AHDSSEVTEV SSDLVIS+ISE
Sbjct: 121 SRVRAARAPEPTGVSMGSPSYGQNPGSRRKKNRTLAAAAHDSSEVTEVQSSDLVISEISE 180

Query: 232 DLIEEPKDATSQYVVYQTEPDEEETGFDLDKKLGNPHPFIDPAKKKPIEEPRTSEELWWN 291
           D IEEPKD TSQYVVYQTEPDEE TGFDLDKK+GNPHPFIDP KKKPIEEPRTSEELWWN
Sbjct: 181 DFIEEPKDDTSQYVVYQTEPDEEVTGFDLDKKIGNPHPFIDPEKKKPIEEPRTSEELWWN 240

Query: 292 WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEHPTLTEASLYRARRHLYKEERL 351
           WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGE PTLTE SLYRARRHLYKEERL
Sbjct: 241 WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLTEVSLYRARRHLYKEERL 300

Query: 352 QAEQERLERIGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFR 411
           QAE+ERLER GPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFR
Sbjct: 301 QAEEERLERTGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFR 360

Query: 412 IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPNEIIDYRGPDFHEPTPDM 471
           IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPT+NYIQDPNEIIDYRGPDFHEPTPDM
Sbjct: 361 IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFHEPTPDM 420

Query: 472 LDFLKEHGKIISREELEEILAKEKNEELEASASALTLIWYFFHRFLTERQNLAKVEKFNS 531
           LDFLKEHGKIISREEL+EILAKEKNEELE                               
Sbjct: 421 LDFLKEHGKIISREELQEILAKEKNEELE------------------------------- 480

Query: 532 ESIGVLEGQSAALMMLCLILEFQIFVSLWLHIIVHPHPHLSKWRFFPSAPITVTDMDDAM 591
                                                               VTDMDDAM
Sbjct: 481 ----------------------------------------------------VTDMDDAM 533

Query: 592 AQAIDIGENDDGEDSEAEGDEEAEEKITRNWSVLKSSPHLNNPKGKPKKEDPASLEGAID 651
           AQAIDIGENDDGEDSE E DEEAEEKITRNWSVLKSSPHLN  KGKP K+DPASL+GAID
Sbjct: 541 AQAIDIGENDDGEDSEVERDEEAEEKITRNWSVLKSSPHLNKQKGKPNKKDPASLDGAID 533

Query: 652 DSENLTDFLMDFEEDE 665
           +SENLTDFLMDFEEDE
Sbjct: 601 ESENLTDFLMDFEEDE 533

[Close]

BLAST of ClCG01G024920 vs. ExPASy TrEMBL
Match: A0A6J1EIK5 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433691 PE=4 SV=1)

HSP 1 Score: 946.0 bits (2444), Expect = 8.2e-272
Identity = 493/613 (80.42%), Postives = 507/613 (82.71%), Query Frame = 0


Query: 52  MASLSTPCLYPERGRNGVFYANRCVGGKPLSNYLKTWFVGSFPVRLLLVGNALNKSLQRN 111
           MASLSTPCLYP+RGR GVFYAN CVGGKPLSN+ KT FVGSFPVRL+LVGNAL KSLQRN
Sbjct: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN 60

Query: 112 QLVPCINCENRDESYQDVSVERPPYHSYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 171
           QLVPCI CEN DESY+DVSVERPPYH YMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 172 RAARAPEPTGASVGSPSYGQNPGSRRKKNRTLAAVAHDSSEVTEVDSSDLVISDISEDLI 231
           RAARAP PTGASVGSPSYGQ PGSRRKKNRT AAVA DSSEVTEVDSSD  I DISEDLI
Sbjct: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDLI 180

Query: 232 EEPKDATSQYVVYQTEPDEEETGFDLDKKLGNPHPFIDPAKKKPIEEPRTSEELWWNWRK 291
           EEPKDATSQYVVY+TEPD+EETGFDLDKKLGNPHPFIDP KKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240

Query: 292 PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEHPTLTEASLYRARRHLYKEERLQAE 351
           PEKEQWSRWQRRK DVETVFLKAMAETGQIKLYGEHPTLTE SLYRARRHL+KEERLQAE
Sbjct: 241 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 300

Query: 352 QERLERIGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFRIMM 411
           QERLERIGPIAFYSEWVK WKRDTSKDAI+KHFEETGED+NTQMIEMFQNQTEREFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 360

Query: 412 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPNEIIDYRGPDFHEPTPDMLDF 471
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPT+NYIQDPNEIIDYRGPDF EPTPDMLD+
Sbjct: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 420

Query: 472 LKEHGKIISREELEEILAKEKNEELEASASALTLIWYFFHRFLTERQNLAKVEKFNSESI 531
           LKEHGKIISR ELEEILAKEKNEELE                                  
Sbjct: 421 LKEHGKIISRTELEEILAKEKNEELE---------------------------------- 480

Query: 532 GVLEGQSAALMMLCLILEFQIFVSLWLHIIVHPHPHLSKWRFFPSAPITVTDMDDAMAQA 591
                                                            VTD+DDAM+QA
Sbjct: 481 -------------------------------------------------VTDLDDAMSQA 530

Query: 592 IDIGENDDGEDSEAEGDEEAEEKITRNWSVLKSSPHLNNPKGKPKKEDPASLEGAIDDSE 651
           IDIGENDDGEDSE EGDEEAEEKITRNWSVLKSSPHLNN KGKPKKEDPASLEGA+DDSE
Sbjct: 541 IDIGENDDGEDSEVEGDEEAEEKITRNWSVLKSSPHLNNSKGKPKKEDPASLEGAVDDSE 530

Query: 652 NLTDFLMDFEEDE 665
           NLTDFLMDFEEDE
Sbjct: 601 NLTDFLMDFEEDE 530

[Close]

BLAST of ClCG01G024920 vs. ExPASy TrEMBL
Match: A0A6J1KRU0 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111497065 PE=4 SV=1)

HSP 1 Score: 941.0 bits (2431), Expect = 2.6e-270
Identity = 490/613 (79.93%), Postives = 505/613 (82.38%), Query Frame = 0


Query: 52  MASLSTPCLYPERGRNGVFYANRCVGGKPLSNYLKTWFVGSFPVRLLLVGNALNKSLQRN 111
           MASLSTPCLYP+RGR GVFYAN CVGGKPLSN+ KT FVGSFPVRL+LVGNAL KSLQ+N
Sbjct: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQKN 60

Query: 112 QLVPCINCENRDESYQDVSVERPPYHSYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 171
           QLVPCI CEN DESY+DVSVERPPYH YMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIRCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 172 RAARAPEPTGASVGSPSYGQNPGSRRKKNRTLAAVAHDSSEVTEVDSSDLVISDISEDLI 231
           RAARAP PTGASVGSPSYGQ PGSRRKKNRT AAV  DSSEVTEVDSSD  I DISEDLI
Sbjct: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVGSDSSEVTEVDSSDSEIPDISEDLI 180

Query: 232 EEPKDATSQYVVYQTEPDEEETGFDLDKKLGNPHPFIDPAKKKPIEEPRTSEELWWNWRK 291
           EEPKDATSQYVVY+TEPD+EETGFDLDKKLGNPHPFIDP KKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240

Query: 292 PEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEHPTLTEASLYRARRHLYKEERLQAE 351
           PEKEQWSRWQRRK DVETVFLKAMAETGQIKLYGEHPTLTE SLYRARRHL+KEERLQAE
Sbjct: 241 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 300

Query: 352 QERLERIGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFRIMM 411
           QERLERIGPIAFYSEWVK WKRDTSKDAI+KHFEETGED+NTQMIEMFQNQTEREFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 360

Query: 412 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTINYIQDPNEIIDYRGPDFHEPTPDMLDF 471
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPT+NYIQDPNEIIDYRGPDF EPTPDMLD+
Sbjct: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 420

Query: 472 LKEHGKIISREELEEILAKEKNEELEASASALTLIWYFFHRFLTERQNLAKVEKFNSESI 531
           LKEHGKIISR ELEEILAKEKNEELE                                  
Sbjct: 421 LKEHGKIISRTELEEILAKEKNEELE---------------------------------- 480

Query: 532 GVLEGQSAALMMLCLILEFQIFVSLWLHIIVHPHPHLSKWRFFPSAPITVTDMDDAMAQA 591
                                                            VTD+DDAM+QA
Sbjct: 481 -------------------------------------------------VTDLDDAMSQA 530

Query: 592 IDIGENDDGEDSEAEGDEEAEEKITRNWSVLKSSPHLNNPKGKPKKEDPASLEGAIDDSE 651
           IDIGENDDGEDSE EGDEEAEEKITRNWSVLKSSPHLN  KGKPKKEDPASLEGA+DDSE
Sbjct: 541 IDIGENDDGEDSEVEGDEEAEEKITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSE 530

Query: 652 NLTDFLMDFEEDE 665
           NLTDFLMDFEEDE
Sbjct: 601 NLTDFLMDFEEDE 530

[Close]

BLAST of ClCG01G024920 vs. TAIR 10
Match: AT2G34640.1 (plastid transcriptionally active 12 )

HSP 1 Score: 617.5 bits (1591), Expect = 1.3e-176
Identity = 340/587 (57.92%), Postives = 402/587 (68.48%), Query Frame = 0


Query: 93  FPVRLLLVG-NALNKSLQRNQLVPCINCENRD-------------ESYQDVSVERPPYHS 152
           FP++ L  G  + ++SL+      CI C+  D             E ++ V+VER PYHS
Sbjct: 35  FPLKTLHAGITSRDRSLRH-----CIKCKKEDGDGDVSEGSKKSEEGFEYVTVERHPYHS 94

Query: 153 YMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGASVGSPSYGQNPGSRRK 212
           YMDSTSG+LEPASGARASIPGE+YWPEGT+SRVRAARAP+P G S   PSYG+NPGSRRK
Sbjct: 95  YMDSTSGKLEPASGARASIPGEDYWPEGTSSRVRAARAPQPAGESSSFPSYGKNPGSRRK 154

Query: 213 KNRTLAAVAHDSSEVTEVDSSDLVISDISEDLIEEPKDATSQYVVYQT--EPDEEETGFD 272
           KNR        + E   V+++D  +SD  +   EE  D++  +V Y+   E +EEETGF+
Sbjct: 155 KNRKA------TEENVTVETND-EVSDSEDSSEEEENDSSDGFVTYKNEFEREEEETGFE 214

Query: 273 LDKKLGNPHPFIDPAKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKPDVETVFLKAMA 332
           LDKKLG PHPFIDP KKK IE+  TS+E WWNWRKPEKEQWSRWQRR+PDVETVFLKAMA
Sbjct: 215 LDKKLGRPHPFIDPTKKKQIEKTLTSDESWWNWRKPEKEQWSRWQRRRPDVETVFLKAMA 274

Query: 333 ETGQIKLYGEHPTLTEASLYRARRHLYKEERLQAEQERLERIGPIAFYSEWVKAWKRDTS 392
           ETGQ+KLYGE PTLTE SLYRARRHL+KEERLQAE+ERL + GP+AFYSEWVKAWKRDTS
Sbjct: 275 ETGQVKLYGEEPTLTETSLYRARRHLFKEERLQAERERLAKEGPMAFYSEWVKAWKRDTS 334

Query: 393 KDAIKKHFEETGEDENTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWG 452
           ++A++KHFEETGEDENTQ+IEMF +QT+RE+RIMMGTDIRI+RDPLAMRMREDQIKQIWG
Sbjct: 335 REAVQKHFEETGEDENTQLIEMFSHQTDREYRIMMGTDIRIKRDPLAMRMREDQIKQIWG 394

Query: 453 GDPVYPTINYIQDPNEIIDYRGPDFHEPTPDMLDFLKEHGKIISREELEEILAKEKNEEL 512
           GDPVYPTINYIQDPN ++D+RGPDFHEPTP+ML +LKE+GK+ISRE  E +L KEK E+L
Sbjct: 395 GDPVYPTINYIQDPNAVMDFRGPDFHEPTPNMLSYLKENGKVISREMHEALLTKEKTEQL 454

Query: 513 EASASALTLIWYFFHRFLTERQNLAKVEKFNSESIGVLEGQSAALMMLCLILEFQIFVSL 572
           E                                                           
Sbjct: 455 E----------------------------------------------------------- 514

Query: 573 WLHIIVHPHPHLSKWRFFPSAPITVTDMDDAMAQAIDIGENDDGEDSEAEGDEEAEEKIT 632
                                   V DMDDAMAQA+DIGENDD ED      E+ +EK+ 
Sbjct: 515 ------------------------VPDMDDAMAQAVDIGENDDDEDD--ADVEKDDEKVP 524

Query: 633 RNWSVLKSSPHLNNPKGKPKKEDPASLEGAIDDSENLTDFLMDFEED 664
           RNWSVLK +P L   K KPKKE   SL+ A+DD+ENLTDFLMDFEE+
Sbjct: 575 RNWSVLKETPELRTAKPKPKKEGRMSLDEAVDDAENLTDFLMDFEEE 524

The following BLAST results are available for this feature:

BLAST of ClCG01G024920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883750.1	2.4e-281	83.36	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Benincasa hispida]	[more]
KAA0052516.1	4.9e-279	79.25	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 [Cucumis melo var. makuwa...	[more]
XP_011658302.1	7.3e-275	80.75	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Cucumis sativus] >KG...	[more]
XP_008439585.1	8.1e-274	80.52	PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 [Cucumis melo]	[more]
KAG6594437.1	1.8e-273	79.74	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic, partial [Cucurbita a...	[more]

BLAST of ClCG01G024920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IHY7	1.8e-175	57.92	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Arabidopsis thalia...	[more]
Q0JIZ1	3.2e-148	53.44	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Oryza sativa subsp...	[more]
B4FZ81	7.2e-148	52.24	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Zea mays OX=4577 G...	[more]

BLAST of ClCG01G024920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CSY1	2.4e-279	79.25	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 OS=Cucumis melo var. maku...	[more]
A0A0A0KM32	3.6e-275	80.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524690 PE=4 SV=1	[more]
A0A1S3AZS1	3.9e-274	80.52	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 OS=Cucumis melo OX=3656 G...	[more]
A0A6J1EIK5	8.2e-272	80.42	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Cucurbita moschata...	[more]
A0A6J1KRU0	2.6e-270	79.93	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Cucurbita maxima O...	[more]

BLAST of ClCG01G024920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34640.1	1.3e-176	57.92	plastid transcriptionally active 12	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 481..501
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 596..648
IPR034581	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12	PANTHER	PTHR35720	PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 12, CHLOROPLASTIC	coord: 52..499 coord: 580..664

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G024920.2	ClCG01G024920.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042793	plastid transcription
biological_process	GO:0090228	positive regulation of red or far-red light signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009637	response to blue light
biological_process	GO:0010218	response to far red light
biological_process	GO:0010114	response to red light
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000427	plastid-encoded plastid RNA polymerase complex