ClCG01G024670 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG01G024670
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionOuter envelope membrane protein 7
LocationCG_Chr01: 37694971 .. 37696933 (-)
RNA-Seq ExpressionClCG01G024670
SyntenyClCG01G024670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTCATAAATTGAAATTGAATTGTTGATTAATAGTTGAAGTTGAAGATGAAATAATTGAGTTCCTCCCAAGTAGTTTACCTTCTATTTTCGATTTTATTTTCATAAGCAGTTTCTAATTATTTGCGTCTGATCTCATTACCTTTTGATTGATTGATTCTACACCAGATAAGTCGAACACAAACTAAAAACACAAAATTAAACACAAAACCAATTTTGTAAAACAGGAAAAATCAAGAGCAATCATGAATAAGAGAAATCATGAATAAAACAAATCAATTCGTAATTTTAGGGTTGAATCGAACAACAAATAATCTTTAGGTGAGGAGTAAATTGAAGGAAAAAATCAAACACTAACCATTGAAAACAGAGGAATTAACTTCAAGAAATCTTCAACTAACTAAATTGAAACCAAATGCAATTTAAAATATTGTCATATCTGTAATATTTTAAAAATTGGTAATATAGATGCTAAAATATAATCTTAATTTGTTACCCAAATGCAATTCCCCTATAACCGTTTAAGATGTCTCACGATAACATTTTTACTCATGCAAGTGCAATCCCAAGTGGGACTTTAATGACAATCATAGGGTCCATGCGTTGAAGTTATCCAGCCCAACATGTGTTAATACCATGAATTTAAATGGGCTTTATTACACCTTGGACCGACATGAGAAAAATGCTAAATTGGGCCTAATAATTGGGCCGAGTAAATTATGGGCCTGGATGACATTAGCCCAAAAAGTAAGCATCGGTTTGTTTCGTCTCACTCTCAGGGAACTTTTGCTTTGTTCTTCCTCACGAAGAGATTTGAGAGATAAAGGGAAGGGCGAAATCGAAATCGGCATGGGGGCAATAACGACGGCGGTGATAGCAATCGGAGCGGTGGTTCTAGGATGGATCACCATCGAAATAGCTTGCAAACCTTGCCTGGAGAAAGGTCGGGAGGCCATTGATCGCTCTCTCAATCCCGATTACGACCCTGACGATGAAATCTCCGACATTCGCGCTCCTCTAAATTCCAACCCCGATTTCACTCCAGATCTTGTTCATACAAACCCTACTCATCCATCTTCCACCACTTCCGATGTCATCAAGGCCGTTTAACTTGAATTCCTTCGCCTAATTTCACCATCTTCTCTTCTCGTATTTAACGGATAATCGCATTTTCTTGTTCAGAAAAAGGTTGTTTGTTCCCGTGAATCGTATTCCAGATTGTAGAATCTGTGGTTCGTGTTGAAGATTTCGCTTTGGAATTGTCTGCTGATCGCGGATTCAAGAATGGTCAACGGATTGCAATGTAAAAATCTCTTGTTCTGTTTTGCTTTTGGATCTCTAATTGTTTGAAATTAGGAGTGATTGGAATTGTTTTCTTACTAGAATAAATGTAATAGACAGATTCAGAACTTGGGAATGTAGAAATGTTCGTATGTTATCTTGTAATTTAACGAATTTAGGCTTGATTGTTCTGCATTGCGTTTGGAGAGTTTGAGCTTAAACGTGCTTGCTCACTTCAGATGAAGGAAATTCAGTGGTTTGTTGCTGAAGAAGCTTATTATTAATTGAATGCATAAACTTAGTAAGAGTATCTTTGAATGTTTATCTGGAAAAACCAAGTGATTGTATTTTAAATGTTGTTGAGAATTCTTGCTCTGGATTATTGTTTTAAAATGAATGGTTTTGTTTCTTTGTTTTCATCTTGCTTCATAACTGCGTTGCAATCCGATGGCAATATCAAAGCTCAGCTGAGATGAGTTTTCTTAACAGTGTTACAATATAAATATAATTAAGAGGTTAATCATTCGAATCTCTCTCACCCATATGCTCGGATTTGATTTGAGCTGAGGCTTCTTCAGAGTTCTCAAAGCTTCAATGGAACCTAAGCCTATGGCTGAGTATCACTGTCAAAGAGGGAGGACTTGTCGTTTGGTCAATAGGGAGCACCTACTTGGGCTAG

mRNA sequence

ATGGAGGAACTTTTGCTTTGTTCTTCCTCACGAAGAGATTTGAGAGATAAAGGGAAGGGCGAAATCGAAATCGGCATGGGGGCAATAACGACGGCGGTGATAGCAATCGGAGCGGTGGTTCTAGGATGGATCACCATCGAAATAGCTTGCAAACCTTGCCTGGAGAAAGGTCGGGAGGCCATTGATCGCTCTCTCAATCCCGATTACGACCCTGACGATGAAATCTCCGACATTCGCGCTCCTCTAAATTCCAACCCCGATTTCACTCCAGATCTTGTTCATACAAACCCTACTCATCCATCTTCCACCACTTCCGATGTCATCAAGGCCATTGTAGAATCTGTGGTTCGTGTTGAAGATTTCGCTTTGGAATTGTCTGCTGATCGCGGATTCAAGAATGAGTTCTCAAAGCTTCAATGGAACCTAAGCCTATGGCTGAGTATCACTGTCAAAGAGGGAGGACTTGTCGTTTGGTCAATAGGGAGCACCTACTTGGGCTAG

Coding sequence (CDS)

ATGGAGGAACTTTTGCTTTGTTCTTCCTCACGAAGAGATTTGAGAGATAAAGGGAAGGGCGAAATCGAAATCGGCATGGGGGCAATAACGACGGCGGTGATAGCAATCGGAGCGGTGGTTCTAGGATGGATCACCATCGAAATAGCTTGCAAACCTTGCCTGGAGAAAGGTCGGGAGGCCATTGATCGCTCTCTCAATCCCGATTACGACCCTGACGATGAAATCTCCGACATTCGCGCTCCTCTAAATTCCAACCCCGATTTCACTCCAGATCTTGTTCATACAAACCCTACTCATCCATCTTCCACCACTTCCGATGTCATCAAGGCCATTGTAGAATCTGTGGTTCGTGTTGAAGATTTCGCTTTGGAATTGTCTGCTGATCGCGGATTCAAGAATGAGTTCTCAAAGCTTCAATGGAACCTAAGCCTATGGCTGAGTATCACTGTCAAAGAGGGAGGACTTGTCGTTTGGTCAATAGGGAGCACCTACTTGGGCTAG

Protein sequence

MEELLLCSSSRRDLRDKGKGEIEIGMGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEISDIRAPLNSNPDFTPDLVHTNPTHPSSTTSDVIKAIVESVVRVEDFALELSADRGFKNEFSKLQWNLSLWLSITVKEGGLVVWSIGSTYLG
Homology
[Close]
BLAST of ClCG01G024670 vs. NCBI nr
Match: XP_011658293.1 (uncharacterized protein LOC101212042 [Cucumis sativus] >KGN49402.1 hypothetical protein Csa_003125 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 6.3e-34
Identity = 76/86 (88.37%), Postives = 81/86 (94.19%), Query Frame = 0 

Query: 26  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEISDIRAPLNSN 85
           MGAITTAVIAIGAVV GWITIEIACKPCLEKGREAIDRSLNPD+DPDDE+SDIRAPLN N
Sbjct: 1   MGAITTAVIAIGAVVAGWITIEIACKPCLEKGREAIDRSLNPDFDPDDEVSDIRAPLNPN 60

Query: 86  PDFTPDLVHTNPTHPSSTTSDVIKAI 112
           P+FTPDL HTNP H SSTTS+VIKA+
Sbjct: 61  PNFTPDLDHTNPNHSSSTTSEVIKAV 86

[Close]
BLAST of ClCG01G024670 vs. NCBI nr
Match: XP_008439626.1 (PREDICTED: uncharacterized protein LOC103484363 [Cucumis melo] >KAA0052538.1 outer envelope membrane protein 7 [Cucumis melo var. makuwa] >TYK13288.1 outer envelope membrane protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 2.4e-33
Identity = 76/86 (88.37%), Postives = 81/86 (94.19%), Query Frame = 0 

Query: 26  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEISDIRAPLNSN 85
           MGAITTAVIAIGAVV GWITIEIACKPCLEKGREAIDRSLNPDYDPDDE+SDIRAPLN N
Sbjct: 1   MGAITTAVIAIGAVVAGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEVSDIRAPLNPN 60

Query: 86  PDFTPDLVHTNPTHPSSTTSDVIKAI 112
            +FTPDL  TNP+HPSSTTS+VIKA+
Sbjct: 61  HNFTPDLDDTNPSHPSSTTSEVIKAV 86

[Close]
BLAST of ClCG01G024670 vs. NCBI nr
Match: XP_022925903.1 (uncharacterized protein LOC111433180 [Cucurbita moschata] >KAG6581432.1 Outer envelope membrane protein 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-29
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0 

Query: 26  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEISDIRAPLNSN 85
           MGAITTAVIAIGAV+LGWITIE ACKPCLEKGREAIDRSLNPDYDPDD++SDIRAPLN N
Sbjct: 1   MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60

Query: 86  PDFTPDLVHTNPTHPSSTTSDVIKAI 112
            D +PDL     +HPSSTTS+V+K +
Sbjct: 61  ADLSPDLDGVKASHPSSTTSEVVKGV 86

[Close]
BLAST of ClCG01G024670 vs. NCBI nr
Match: XP_023543277.1 (uncharacterized protein LOC111803204 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-29
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0 

Query: 26  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEISDIRAPLNSN 85
           MGAITTAVIAIGAV+LGWITIE ACKPCLEKGREAIDRSLNPDYDPDD++SDIRAPLN N
Sbjct: 1   MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60

Query: 86  PDFTPDLVHTNPTHPSSTTSDVIKAI 112
            D +PDL     +HPSSTTS+V+K +
Sbjct: 61  ADLSPDLDVVKASHPSSTTSEVVKGV 86

[Close]
BLAST of ClCG01G024670 vs. NCBI nr
Match: XP_022146479.1 (uncharacterized protein LOC111015691 [Momordica charantia])

HSP 1 Score: 139.0 bits (349), Expect = 3.6e-29
Identity = 68/86 (79.07%), Postives = 77/86 (89.53%), Query Frame = 0 

Query: 26  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEISDIRAPLNSN 85
           M AITTAVIAIGAVVLGWITIEIACKPCLEKGR+AIDRSLNPDYDPDDE+S+IRAPLN N
Sbjct: 1   MAAITTAVIAIGAVVLGWITIEIACKPCLEKGRDAIDRSLNPDYDPDDEVSNIRAPLNPN 60

Query: 86  PDFTPDLVHTNPTHPSSTTSDVIKAI 112
            D  PDL  +N +HPS T+SD++KA+
Sbjct: 61  ADLAPDLHDSNASHPSYTSSDLVKAV 86

[Close]
BLAST of ClCG01G024670 vs. ExPASy TrEMBL
Match: A0A0A0KLZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523430 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 3.1e-34
Identity = 76/86 (88.37%), Postives = 81/86 (94.19%), Query Frame = 0 

Query: 26  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEISDIRAPLNSN 85
           MGAITTAVIAIGAVV GWITIEIACKPCLEKGREAIDRSLNPD+DPDDE+SDIRAPLN N
Sbjct: 1   MGAITTAVIAIGAVVAGWITIEIACKPCLEKGREAIDRSLNPDFDPDDEVSDIRAPLNPN 60

Query: 86  PDFTPDLVHTNPTHPSSTTSDVIKAI 112
           P+FTPDL HTNP H SSTTS+VIKA+
Sbjct: 61  PNFTPDLDHTNPNHSSSTTSEVIKAV 86

[Close]
BLAST of ClCG01G024670 vs. ExPASy TrEMBL
Match: A0A5D3CQ30 (Outer envelope membrane protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009070 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.2e-33
Identity = 76/86 (88.37%), Postives = 81/86 (94.19%), Query Frame = 0 

Query: 26  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEISDIRAPLNSN 85
           MGAITTAVIAIGAVV GWITIEIACKPCLEKGREAIDRSLNPDYDPDDE+SDIRAPLN N
Sbjct: 1   MGAITTAVIAIGAVVAGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEVSDIRAPLNPN 60

Query: 86  PDFTPDLVHTNPTHPSSTTSDVIKAI 112
            +FTPDL  TNP+HPSSTTS+VIKA+
Sbjct: 61  HNFTPDLDDTNPSHPSSTTSEVIKAV 86

[Close]
BLAST of ClCG01G024670 vs. ExPASy TrEMBL
Match: A0A1S3AZV1 (uncharacterized protein LOC103484363 OS=Cucumis melo OX=3656 GN=LOC103484363 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.2e-33
Identity = 76/86 (88.37%), Postives = 81/86 (94.19%), Query Frame = 0 

Query: 26  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEISDIRAPLNSN 85
           MGAITTAVIAIGAVV GWITIEIACKPCLEKGREAIDRSLNPDYDPDDE+SDIRAPLN N
Sbjct: 1   MGAITTAVIAIGAVVAGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEVSDIRAPLNPN 60

Query: 86  PDFTPDLVHTNPTHPSSTTSDVIKAI 112
            +FTPDL  TNP+HPSSTTS+VIKA+
Sbjct: 61  HNFTPDLDDTNPSHPSSTTSEVIKAV 86

[Close]
BLAST of ClCG01G024670 vs. ExPASy TrEMBL
Match: A0A6J1EGJ5 (uncharacterized protein LOC111433180 OS=Cucurbita moschata OX=3662 GN=LOC111433180 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 7.8e-30
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0 

Query: 26  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEISDIRAPLNSN 85
           MGAITTAVIAIGAV+LGWITIE ACKPCLEKGREAIDRSLNPDYDPDD++SDIRAPLN N
Sbjct: 1   MGAITTAVIAIGAVILGWITIETACKPCLEKGREAIDRSLNPDYDPDDDVSDIRAPLNPN 60

Query: 86  PDFTPDLVHTNPTHPSSTTSDVIKAI 112
            D +PDL     +HPSSTTS+V+K +
Sbjct: 61  ADLSPDLDGVKASHPSSTTSEVVKGV 86

[Close]
BLAST of ClCG01G024670 vs. ExPASy TrEMBL
Match: A0A6J1CY91 (uncharacterized protein LOC111015691 OS=Momordica charantia OX=3673 GN=LOC111015691 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.7e-29
Identity = 68/86 (79.07%), Postives = 77/86 (89.53%), Query Frame = 0 

Query: 26  MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDEISDIRAPLNSN 85
           M AITTAVIAIGAVVLGWITIEIACKPCLEKGR+AIDRSLNPDYDPDDE+S+IRAPLN N
Sbjct: 1   MAAITTAVIAIGAVVLGWITIEIACKPCLEKGRDAIDRSLNPDYDPDDEVSNIRAPLNPN 60

Query: 86  PDFTPDLVHTNPTHPSSTTSDVIKAI 112
            D  PDL  +N +HPS T+SD++KA+
Sbjct: 61  ADLAPDLHDSNASHPSYTSSDLVKAV 86

[Close]
BLAST of ClCG01G024670 vs. TAIR 10
Match: AT2G34585.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 43 Blast hits to 43 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 2.5e-20
Identity = 51/77 (66.23%), Postives = 59/77 (76.62%), Query Frame = 0 

Query: 26 MGAITTAVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDDE----ISDIRAP 85
          M AIT+AVIAI  ++LGWITIE+ACKPCLE GREAIDRSLNPDYDPDD+     SD+RAP
Sbjct: 1  MAAITSAVIAIAGIILGWITIELACKPCLESGREAIDRSLNPDYDPDDQDVDSSSDVRAP 60

Query: 86 LNSNPDFTPDLVHTNPT 99
          L   P+  PD    +PT
Sbjct: 61 L--IPNHPPDNSDPDPT 75

[Close]
BLAST of ClCG01G024670 vs. TAIR 10
Match: AT3G52420.1 (outer envelope membrane protein 7 )

HSP 1 Score: 44.7 bits (104), Expect = 8.6e-05
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 0 

Query: 32 AVIAIGAVVLGWITIEIACKPCLEKGREAIDRSLNPDYDPDD 74
          A + + A+ LGW+ IEIA KP L+K R +ID+S +P  DPDD
Sbjct: 10 ATVVVAAMALGWLAIEIAFKPFLDKFRSSIDKS-DPTKDPDD 50

The following BLAST results are available for this feature:
BLAST of ClCG01G024670 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011658293.16.3e-3488.37uncharacterized protein LOC101212042 [Cucumis sativus] >KGN49402.1 hypothetical ... [more]
XP_008439626.12.4e-3388.37PREDICTED: uncharacterized protein LOC103484363 [Cucumis melo] >KAA0052538.1 out... [more]
XP_022925903.11.6e-2979.07uncharacterized protein LOC111433180 [Cucurbita moschata] >KAG6581432.1 Outer en... [more]
XP_023543277.12.1e-2979.07uncharacterized protein LOC111803204 [Cucurbita pepo subsp. pepo][more]
XP_022146479.13.6e-2979.07uncharacterized protein LOC111015691 [Momordica charantia][more]
BLAST of ClCG01G024670 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG01G024670 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLZ93.1e-3488.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523430 PE=4 SV=1[more]
A0A5D3CQ301.2e-3388.37Outer envelope membrane protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3AZV11.2e-3388.37uncharacterized protein LOC103484363 OS=Cucumis melo OX=3656 GN=LOC103484363 PE=... [more]
A0A6J1EGJ57.8e-3079.07uncharacterized protein LOC111433180 OS=Cucurbita moschata OX=3662 GN=LOC1114331... [more]
A0A6J1CY911.7e-2979.07uncharacterized protein LOC111015691 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
BLAST of ClCG01G024670 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G34585.12.5e-2066.23unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G52420.18.6e-0552.38outer envelope membrane protein 7 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038944Outer envelope membrane protein 7-likePANTHERPTHR33982OUTER ENVELOPE MEMBRANE PROTEIN 7-RELATEDcoord: 26..107
NoneNo IPR availablePANTHERPTHR33982:SF1OS07G0154300 PROTEINcoord: 26..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G024670.2ClCG01G024670.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane