ClCG01G021860 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G021860
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	U3 small nucleolar RNA-associated protein 6 homolog
Location	CG_Chr01: 35558642 .. 35561863 (-)
RNA-Seq Expression	ClCG01G021860
Synteny	ClCG01G021860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACGTTGTGCAGTTCCGACTCGAGGGCATGGTCGACGAGCTCGATGACCTCGAGCAACGTGGCCTCTTCTCTCGGCGAGAGATTGCCGAGATTGTAAAGCAGCGGCGCAAGTTCGAGTACCGTCTGAAGCGCCCTTGTCCACTTAAGCAGGACTATTTGGCCTATATCGATTATGAGACCCATTTGGAATCGCTTCGTAGTCTAAGGAAGAAGGCAGTGGCAAGCGAACTTAAGAAGCAGGGAAATAAAAAGATGAGAAAGTCTATCTCCGACTTCGCCGGTGTGAAAAGGATCTTGTACATTTATCGACTTGCGGTTACTAGGTATAAGGGTGATATTGACCTCTGGTTTCGCTATCTCGAGTTTTGTAGAGCACGAAAGAACGGGAGAATGAAGAAGGTATTACATTGTATTCCACTTTCGGATTAAATATAGTTCCTGTTCGTAGTTTGATATAGAAGGGGAGAAATTAATGTTCATTTTGATCTCTGGGCCTATTGTTGTAGAACTGAGATAATATGAAGGTAGTTGAAGTCAGTCTTTCTATACTTGTGGTTACTTGTGTCGATATCAATCGTTTCTCTTCCAACTTTTGCAGGTTCTGGCTCAGCTGATTAGATTCCACCCAAAAATTCCAGGGGTATGGATCTATGCTGCTGCTTGGGAGTTTGATCATAATTCCAATGTTGATGCAGCACGTTCTCTTATGTTAAGTGGTTTGAGAGTTTGCCCAACTTCAGAGGATCTTTGGGTAGAATATTTACGGATGGAACTTACTTATCTTAATAAGTTGAAGGCCCGAAAGGTTGCCCTTGGAGAGGACGAGGGAAGTCTGGTCCGTGAAAATATAGCTGCTGAGGAGAAACAGTGGAGAGAAGAAAATAAAGATTTGTTTATGTCAATGGTTGAAGCAAGGGAAGACAATGATGGATCCGATGTTGAAACGGAGTCAAAAAACAAATTGGATTTGTTTCGAGAGCAGGGTTCAAACATTTTAGAAACTATCTACAGTGGAGCAATTGAAGCTCTACCTTCTAGTTTTAGTCTGAGAAAGCGTGTCTTAGAGATATTGGAAGCAATGGATTTAGCTCATTCAGAAGAAATGCAGTCAAAGATATTACAAGATATAAAAAGAGACTTCGCTACAGAACCGGAATTTTGGGACTGGCTGGCTAGACTTCAGTGTAATCCTGAAAATGTACAGGGAATGGATGATACAAAGGAAATTTCTCGGATTGAAAAGGCTGTTCAGGTGTGAATTTTATGCATGATAGAAATCACAATTATTTCAAATCTGCATAGTTATGTTATATCTATCATTTTCTTCATTGATGATAAACAGTAGTTTAAGGAAGCATATATTTCTTTATTAAGAAAATTACCAGCTTTAGAAGAGCATGTACGATCTTTGTTTACTTAAGACGCAACTAAATGAAAATTATGTAACAACTTATGTGCCTGCCTTTTCTCTATGAGTATCTAAGGTTTGCTTTTTCCATGCTTATCAACACAGGTCTACGAGGAAGGCCTGGAGTGTGTGCCTTCATCTACAATTTTTAGCTTGTATGTGAAGTTTTTGATGAGCATCGTTGCCCCTGTTAAGGGTGAACAAACGTCTGGGTTATCTAGTCATACTGAGAACATTGCTTCACGACTCTTAATGGTGTATGAAAAGGCTCTAACTTTAGGACATATTACAGACGATTTAGCATGCCAATATGTTTTGTTTTATTTGGAACTTGGGAGATTGGATGAAGCAAGGAAGCTTGCAGAAAGACTTTGCAGTGGAAAATTTTCTAATTCTGTGAAGTTATGGGTATTGAGAGTCTCCACAGAAATAAAATGCATTTTGAAGGATTCTCCTTCTCCAAGTAAGGATGATCTGAAGTCCATTTTTGAACTGACAAAAGAGGTTCTGAGAGATTTTTCAGTTTCAGAATCTGGGAGCTTGTGGCTAACGGTATATCTGCTGCACCTTAAAAAACTTTGAATCCTGATATACTCAATGATTTTGTTGGTTCAAGATATGCGCTCTTTGCCATTAAAATGCTTTCATGGCATTGCTCACTCGAGAGCTTACATGTTTAATTTATTTAGAATGGACATTGAGATGTTGTTGGTTATTAGAAGTAAAAATCTGAGCCCTTATTATTCTGGTTTAACCACTGCAGGTCCTCAAGTTTTTTGCCAACCAGAGTAATTATTTTGACAAATTGGTGGAAATTTCTCTTTTAGCTTTGGCTAAATCTGGTGGAAATGAGGATGGATTTTCACTCTCCTCAGCCATTGTTGATTTTGTTCTACAAAAAGATGGAATTCAGCGTTCTAGAGAAGTTTATAAGAAGTATGTCATTCCAACACCAGATAATTCTTCTTAGTTAAAATTATTTTGGTATCTGCATTTTGCGTGACTCCATCTTTAGTCCATCAGGTTTATATTTAGTTACTGGACTTTCTGTTAGTTTGAACCTAGTTTTAGTGGACAAAAAGGGTATTCTAATCGTTTTTCTTTTATAAGAATATCTGCTTTACAAAGTTGCCTAGTTCAGTTTCTAAAACCTTGTTTCTCTTGTTTCAACAGATTTCTTGGATTGCCCCACCCAGGGCTTGCTATGTACCAAACGTGTATTCAGCTGGAATCTAACCTTGCATCTGTAGGGGATAAAGATGGTCTTGCAAATGCTCGTAAGCTATTTGAATCTGCACTTGCGACTTATAGCCAAGATGTTAGCTTGTGGCAAGAGTACTACACAATGGAATCTGAGGTAACCTTGCAGTTTCTATATAATCTTGAAATGTACATGACATTTAATTGTTTTTTCTATTTAGTCCTCTCCCATTGGTCATCGTCATGGTTACAGAATCATGCTATTTTACATTATATCATTCATGACCGTTATTTTTTAGCATTGATTCAGTATAAGCGTCCTGTATGTATTATTCCCACCATTGTGTCCGTTTCATTAGAACGGCTATCTTTCTTCATTCTCTGTTAACTACGTGCTGATGGCAGAACAAACAAACTGCATCATTGTTGTTTTCCCCTGCTACATTTTAATTGAATGTGTTGTCCACTTATCCTCCAATATATTCATGAGTTCGTTCTTCCTGCTGATTTTACAGATAGGATCATCAGAAACCGCAGCTGCAATTCGTTGGCGTGCAAGGAAAACATTAAAAGATGTTACAGGCCTTGTTACTTCCTCTGATTTGTGA

mRNA sequence

ATGGCGGACGTTGTGCAGTTCCGACTCGAGGGCATGGTCGACGAGCTCGATGACCTCGAGCAACGTGGCCTCTTCTCTCGGCGAGAGATTGCCGAGATTGTAAAGCAGCGGCGCAAGTTCGAGTACCGTCTGAAGCGCCCTTGTCCACTTAAGCAGGACTATTTGGCCTATATCGATTATGAGACCCATTTGGAATCGCTTCGTAGTCTAAGGAAGAAGGCAGTGGCAAGCGAACTTAAGAAGCAGGGAAATAAAAAGATGAGAAAGTCTATCTCCGACTTCGCCGGTGTGAAAAGGATCTTGTACATTTATCGACTTGCGGTTACTAGGTATAAGGGTGATATTGACCTCTGGTTTCGCTATCTCGAGTTTTGTAGAGCACGAAAGAACGGGAGAATGAAGAAGGTTCTGGCTCAGCTGATTAGATTCCACCCAAAAATTCCAGGGGTATGGATCTATGCTGCTGCTTGGGAGTTTGATCATAATTCCAATGTTGATGCAGCACGTTCTCTTATGTTAAGTGGTTTGAGAGTTTGCCCAACTTCAGAGGATCTTTGGGTAGAATATTTACGGATGGAACTTACTTATCTTAATAAGTTGAAGGCCCGAAAGGTTGCCCTTGGAGAGGACGAGGGAAGTCTGGTCCGTGAAAATATAGCTGCTGAGGAGAAACAGTGGAGAGAAGAAAATAAAGATTTGTTTATGTCAATGGTTGAAGCAAGGGAAGACAATGATGGATCCGATGTTGAAACGGAGTCAAAAAACAAATTGGATTTGTTTCGAGAGCAGGGTTCAAACATTTTAGAAACTATCTACAGTGGAGCAATTGAAGCTCTACCTTCTAGTTTTAGTCTGAGAAAGCGTGTCTTAGAGATATTGGAAGCAATGGATTTAGCTCATTCAGAAGAAATGCAGTCAAAGATATTACAAGATATAAAAAGAGACTTCGCTACAGAACCGGAATTTTGGGACTGGCTGGCTAGACTTCAGTGTAATCCTGAAAATGTACAGGGAATGGATGATACAAAGGAAATTTCTCGGATTGAAAAGGCTGTTCAGGTCTACGAGGAAGGCCTGGAGTGTGTGCCTTCATCTACAATTTTTAGCTTGTATGTGAAGTTTTTGATGAGCATCGTTGCCCCTGTTAAGGGTGAACAAACGTCTGGGTTATCTAGTCATACTGAGAACATTGCTTCACGACTCTTAATGGTGTATGAAAAGGCTCTAACTTTAGGACATATTACAGACGATTTAGCATGCCAATATGTTTTGTTTTATTTGGAACTTGGGAGATTGGATGAAGCAAGGAAGCTTGCAGAAAGACTTTGCAGTGGAAAATTTTCTAATTCTGTGAAGTTATGGGTATTGAGAGTCTCCACAGAAATAAAATGCATTTTGAAGGATTCTCCTTCTCCAAGTAAGGATGATCTGAAGTCCATTTTTGAACTGACAAAAGAGGTTCTGAGAGATTTTTCAGTTTCAGAATCTGGGAGCTTGTGGCTAACGGTCCTCAAGTTTTTTGCCAACCAGAGTAATTATTTTGACAAATTGGTGGAAATTTCTCTTTTAGCTTTGGCTAAATCTGGTGGAAATGAGGATGGATTTTCACTCTCCTCAGCCATTGTTGATTTTGTTCTACAAAAAGATGGAATTCAGCGTTCTAGAGAAGTTTATAAGAAATTTCTTGGATTGCCCCACCCAGGGCTTGCTATGTACCAAACGTGTATTCAGCTGGAATCTAACCTTGCATCTGTAGGGGATAAAGATGGTCTTGCAAATGCTCGTAAGCTATTTGAATCTGCACTTGCGACTTATAGCCAAGATGTTAGCTTGTGGCAAGAGTACTACACAATGGAATCTGAGATAGGATCATCAGAAACCGCAGCTGCAATTCGTTGGCGTGCAAGGAAAACATTAAAAGATGTTACAGGCCTTGTTACTTCCTCTGATTTGTGA

Coding sequence (CDS)

ATGGCGGACGTTGTGCAGTTCCGACTCGAGGGCATGGTCGACGAGCTCGATGACCTCGAGCAACGTGGCCTCTTCTCTCGGCGAGAGATTGCCGAGATTGTAAAGCAGCGGCGCAAGTTCGAGTACCGTCTGAAGCGCCCTTGTCCACTTAAGCAGGACTATTTGGCCTATATCGATTATGAGACCCATTTGGAATCGCTTCGTAGTCTAAGGAAGAAGGCAGTGGCAAGCGAACTTAAGAAGCAGGGAAATAAAAAGATGAGAAAGTCTATCTCCGACTTCGCCGGTGTGAAAAGGATCTTGTACATTTATCGACTTGCGGTTACTAGGTATAAGGGTGATATTGACCTCTGGTTTCGCTATCTCGAGTTTTGTAGAGCACGAAAGAACGGGAGAATGAAGAAGGTTCTGGCTCAGCTGATTAGATTCCACCCAAAAATTCCAGGGGTATGGATCTATGCTGCTGCTTGGGAGTTTGATCATAATTCCAATGTTGATGCAGCACGTTCTCTTATGTTAAGTGGTTTGAGAGTTTGCCCAACTTCAGAGGATCTTTGGGTAGAATATTTACGGATGGAACTTACTTATCTTAATAAGTTGAAGGCCCGAAAGGTTGCCCTTGGAGAGGACGAGGGAAGTCTGGTCCGTGAAAATATAGCTGCTGAGGAGAAACAGTGGAGAGAAGAAAATAAAGATTTGTTTATGTCAATGGTTGAAGCAAGGGAAGACAATGATGGATCCGATGTTGAAACGGAGTCAAAAAACAAATTGGATTTGTTTCGAGAGCAGGGTTCAAACATTTTAGAAACTATCTACAGTGGAGCAATTGAAGCTCTACCTTCTAGTTTTAGTCTGAGAAAGCGTGTCTTAGAGATATTGGAAGCAATGGATTTAGCTCATTCAGAAGAAATGCAGTCAAAGATATTACAAGATATAAAAAGAGACTTCGCTACAGAACCGGAATTTTGGGACTGGCTGGCTAGACTTCAGTGTAATCCTGAAAATGTACAGGGAATGGATGATACAAAGGAAATTTCTCGGATTGAAAAGGCTGTTCAGGTCTACGAGGAAGGCCTGGAGTGTGTGCCTTCATCTACAATTTTTAGCTTGTATGTGAAGTTTTTGATGAGCATCGTTGCCCCTGTTAAGGGTGAACAAACGTCTGGGTTATCTAGTCATACTGAGAACATTGCTTCACGACTCTTAATGGTGTATGAAAAGGCTCTAACTTTAGGACATATTACAGACGATTTAGCATGCCAATATGTTTTGTTTTATTTGGAACTTGGGAGATTGGATGAAGCAAGGAAGCTTGCAGAAAGACTTTGCAGTGGAAAATTTTCTAATTCTGTGAAGTTATGGGTATTGAGAGTCTCCACAGAAATAAAATGCATTTTGAAGGATTCTCCTTCTCCAAGTAAGGATGATCTGAAGTCCATTTTTGAACTGACAAAAGAGGTTCTGAGAGATTTTTCAGTTTCAGAATCTGGGAGCTTGTGGCTAACGGTCCTCAAGTTTTTTGCCAACCAGAGTAATTATTTTGACAAATTGGTGGAAATTTCTCTTTTAGCTTTGGCTAAATCTGGTGGAAATGAGGATGGATTTTCACTCTCCTCAGCCATTGTTGATTTTGTTCTACAAAAAGATGGAATTCAGCGTTCTAGAGAAGTTTATAAGAAATTTCTTGGATTGCCCCACCCAGGGCTTGCTATGTACCAAACGTGTATTCAGCTGGAATCTAACCTTGCATCTGTAGGGGATAAAGATGGTCTTGCAAATGCTCGTAAGCTATTTGAATCTGCACTTGCGACTTATAGCCAAGATGTTAGCTTGTGGCAAGAGTACTACACAATGGAATCTGAGATAGGATCATCAGAAACCGCAGCTGCAATTCGTTGGCGTGCAAGGAAAACATTAAAAGATGTTACAGGCCTTGTTACTTCCTCTGATTTGTGA

Protein sequence

MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENIAAEEKQWREENKDLFMSMVEAREDNDGSDVETESKNKLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEILEAMDLAHSEEMQSKILQDIKRDFATEPEFWDWLARLQCNPENVQGMDDTKEISRIEKAVQVYEEGLECVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDKDGLANARKLFESALATYSQDVSLWQEYYTMESEIGSSETAAAIRWRARKTLKDVTGLVTSSDL

Homology

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BLAST of ClCG01G021860 vs. NCBI nr
Match: XP_038883020.1 (U3 small nucleolar RNA-associated protein 6 homolog [Benincasa hispida])

HSP 1 Score: 1196.0 bits (3093), Expect = 0.0e+00
Identity = 610/652 (93.56%), Postives = 628/652 (96.32%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLE MVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY
Sbjct: 1   MADVVQFRLESMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60

Query: 61  ETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E HLESLR LRKKAVA ELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR
Sbjct: 61  EIHLESLRHLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRARKNGRMKKVLAQLIRFHPK+PGVWIYAAAWEFDHN+NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENIAAEEKQWREENKDLFMSMVEA 240
           TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVREN+AAEEKQWREE+KDLFM M EA
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENMAAEEKQWREEHKDLFMPMGEA 240

Query: 241 REDNDGSDVETESKNKLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           REDNDGS VETESKNKLDLFREQGSNILETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 REDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFATEPEFWDWLARLQCNPENVQGMDDTKEISRIEKAVQVYEEGLE 360
           SEEMQSKILQDIKRDF TEP++WDWLARLQ NPEN+QGM   KEISRIEKAVQVYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFGTEPQYWDWLARLQYNPENLQGMSAIKEISRIEKAVQVYEEGLE 360

Query: 361 CVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVYEKALTLGHITDDLAC 420
           CVPSSTIFSLYVKFLM ++ PVKGE+TSGLS+HTENI SRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CVPSSTIFSLYVKFLMGLITPVKGEETSGLSTHTENITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEARKLAERLCSG+FSNSVKLWVLRVSTEIKCI KDSPSPSKDDLK I
Sbjct: 421 QYVLFYLELGRLDEARKLAERLCSGEFSNSVKLWVLRVSTEIKCISKDSPSPSKDDLKYI 480

Query: 481 FELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKEVL++FSVSESGSLWLTVLKFFANQS YFDKLVEISLLALAKSGGNEDGFSLSSA
Sbjct: 481 FELTKEVLKNFSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSA 540

Query: 541 IVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDKDGLANARKLFES 600
           IVDFVLQKDGIQR+REVYKKFLGLPHPGLAMYQTCIQLESNLAS+GDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASIGDKDGLANARKLFES 600

Query: 601 ALATYS-QDVSLWQEYYTMESEIGSSETAAAIRWRARKTLKDVTGLVTSSDL 652
           AL TY   DVSLWQEYYTMES+IGSSETAAAIRWRARKTLKD T LVTSSDL
Sbjct: 601 ALTTYGHDDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALVTSSDL 652

[Close]

BLAST of ClCG01G021860 vs. NCBI nr
Match: XP_004134769.1 (U3 small nucleolar RNA-associated protein 6 homolog [Cucumis sativus] >KGN49099.1 hypothetical protein Csa_003801 [Cucumis sativus])

HSP 1 Score: 1165.2 bits (3013), Expect = 0.0e+00
Identity = 590/651 (90.63%), Postives = 615/651 (94.47%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGMVDELDD E+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDY
Sbjct: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  ETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E  LESLR LRKKAVA ELKKQG+KKM+KSISDFAGVKRILYIYRLAVTRYKGDIDLWFR
Sbjct: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRARKNG MKKVLAQLIRFHPK+PGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENIAAEEKQWREENKDLFMSMVEA 240
           TSEDLW+EYLRMELTYLNKLKARKVALGEDEGSLVRENI A EKQWREENKDLFMSM E 
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240

Query: 241 REDNDGSDVETESKNKLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R DND S VET SK+KLDLFRE+GSN+LETIYSGAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFATEPEFWDWLARLQCNPENVQGMDDTKEISRIEKAVQVYEEGLE 360
           SEEMQSKILQDIKRDFA++P++WDWLARL CNPENVQG  D KEISRIEKAV+VYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360

Query: 361 CVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVYEKALTLGHITDDLAC 420
           CVPSS IFSLYV+FL SI+ PVKGEQT GLSSHT+NI SRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEA+KLAERLCSGKFSNSVKLWVLRVSTEIKC+LKDSPSPSKDDLKSI
Sbjct: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480

Query: 481 FELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKEVL+ FSVSESGSLWL VLKFFANQS YFDKLVEISL ALAKSGGNEDGFSLSS 
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDKDGLANARKLFES 600
           IVDFVLQKDGIQR+REVYKKFLGLPHPGLAMYQTCIQLESNLA+ GDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALATYSQDVSLWQEYYTMESEIGSSETAAAIRWRARKTLKDVTGLVTSSDL 652
           ALATY Q+V LWQEYYT+ES+IGSSETAAA+RWRARKTLKD T L TSSDL
Sbjct: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]

BLAST of ClCG01G021860 vs. NCBI nr
Match: XP_008440018.1 (PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Cucumis melo] >TYK13035.1 U3 small nucleolar RNA-associated protein 6-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1153.3 bits (2982), Expect = 0.0e+00
Identity = 584/651 (89.71%), Postives = 614/651 (94.32%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGMVDELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDY
Sbjct: 1   MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  ETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E  L+SLR LR+KAVA ELKKQGNKKMR SISDFAGVKRILYIYRLAV+RYKGDIDLWFR
Sbjct: 61  EIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRARKNGRMKKVLAQLIRFHPK+PGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENIAAEEKQWREENKDLFMSMVEA 240
           TSEDLW+EYLRMELTYLNKLKARKVALGEDEGSLVRENI A EKQWREENKDLFMSM E 
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGET 240

Query: 241 REDNDGSDVETESKNKLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R D+DGS VET SKNKLDLFRE+GSNILETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFATEPEFWDWLARLQCNPENVQGMDDTKEISRIEKAVQVYEEGLE 360
           SEEMQSKILQDIKRDFA++P++WDWLARL+ NPENVQG  D KEISRIE+AV+VYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLE 360

Query: 361 CVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVYEKALTLGHITDDLAC 420
           C+PSS +FSLYVKFL SI+ PVKGEQT GLSSHTENI SRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEA++LA+RLCSGKFSNSVKLW LRVSTEIKC  KDSPSPSK+DLKSI
Sbjct: 421 QYVLFYLELGRLDEAQELAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSI 480

Query: 481 FELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKEVL+ FSVSESGSLWL VLKFFANQS YFDKLVEISLLALAKSGGNEDGFSLSS 
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDKDGLANARKLFES 600
           IVDFVLQKDGIQ +REVYKKFLGLPHPGLAMYQTCIQLESNLA+ GDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALATYSQDVSLWQEYYTMESEIGSSETAAAIRWRARKTLKDVTGLVTSSDL 652
           AL TY Q+VSLWQEYYT+ES+IGSSETAAA+RWRARKTLKD T L TSSDL
Sbjct: 601 ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]

BLAST of ClCG01G021860 vs. NCBI nr
Match: XP_022142158.1 (U3 small nucleolar RNA-associated protein 6 homolog [Momordica charantia])

HSP 1 Score: 1152.1 bits (2979), Expect = 0.0e+00
Identity = 580/651 (89.09%), Postives = 618/651 (94.93%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAY+DY
Sbjct: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYVDY 60

Query: 61  ETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           ETHL+SLR+LRKKAVA ELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR
Sbjct: 61  ETHLDSLRNLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCR ++NGRMKKVLAQLIRFHPK+PGVWIYAAAWEFDHN+NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRGQQNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENIAAEEKQWREENKDLFMSMVEA 240
           TSEDLWVEYLRMELTYLNKLKARKVALGED+GSLVREN AAEEKQWREENKDLFMS+ E 
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENRAAEEKQWREENKDLFMSIGEE 240

Query: 241 REDNDGSDVETESKNKLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           RE+NDGS VETESK++LDLFREQGSNILETIY+GAIEALPSSFSLRKRVLEILEAMDL+H
Sbjct: 241 RENNDGSVVETESKDQLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLSH 300

Query: 301 SEEMQSKILQDIKRDFATEPEFWDWLARLQCNPENVQGMDDTKEISRIEKAVQVYEEGLE 360
           SEEM SKILQD+KRDF T+P++WDWLARL+CNPENVQGM D KEIS+IEKAVQVYEE LE
Sbjct: 301 SEEMHSKILQDLKRDFGTQPQYWDWLARLECNPENVQGMSDGKEISQIEKAVQVYEEALE 360

Query: 361 CVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVYEKALTLGHITDDLAC 420
           C+PSST+FSLYV+FLM+I+ PVKG+ TSGLSS+T NI SRLL+VYEKALTLGHIT+DL C
Sbjct: 361 CLPSSTMFSLYVEFLMNIITPVKGKHTSGLSSYTVNITSRLLVVYEKALTLGHITEDLGC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYV FYL+LGRLDEARKLAERLCSGK SNSVKLWVLRVS EIKCILKDSPSPSKDD+KSI
Sbjct: 421 QYVSFYLQLGRLDEARKLAERLCSGKLSNSVKLWVLRVSNEIKCILKDSPSPSKDDMKSI 480

Query: 481 FELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTK+VLRDFSVSES SLWL VL FFANQS YFDKL+EISLLALAK GG+EDGFSLSS 
Sbjct: 481 FELTKDVLRDFSVSESESLWLVVLNFFANQSYYFDKLLEISLLALAKYGGSEDGFSLSST 540

Query: 541 IVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDKDGLANARKLFES 600
           IVDFVLQKDGIQR+REVYKKFLGLPHPG AMY+TCIQLESNLAS GDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGRAMYRTCIQLESNLASAGDKDGLANARKLFES 600

Query: 601 ALATYSQDVSLWQEYYTMESEIGSSETAAAIRWRARKTLKDVTGLVTSSDL 652
           AL TY QDVSLWQEY  ME++IGSSETAAAIRWRARKTLKD T LVTSSDL
Sbjct: 601 ALTTYDQDVSLWQEYCIMEAKIGSSETAAAIRWRARKTLKDATALVTSSDL 651

[Close]

BLAST of ClCG01G021860 vs. NCBI nr
Match: XP_023517938.1 (U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1142.1 bits (2953), Expect = 0.0e+00
Identity = 581/651 (89.25%), Postives = 617/651 (94.78%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGM+DELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY+AYIDY
Sbjct: 1   MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDY 60

Query: 61  ETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           ETHL+SLR LRKKAV+ ELKKQGNKKMRKS SDFA VKRILYIYRLAV+RYKGDIDLWFR
Sbjct: 61  ETHLDSLRRLRKKAVSRELKKQGNKKMRKSASDFACVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRA+KNGRMKKVLAQLIRFHPK+PGVWIYAAAWEFDH++NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENIAAEEKQWREENKDLFMSMVEA 240
           TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVREN AAE+KQWREENKDLFMS+ E 
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGED 240

Query: 241 REDNDGSDVETESKNKLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           REDNDGS  ETESKNKLDLFREQGSNILETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 REDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFATEPEFWDWLARLQCNPENVQGMDDTKEISRIEKAVQVYEEGLE 360
           SEE+ SKILQDIKRDF TEP++WDWLARLQ NP++VQGM D KE SRIEKAVQVYEEGLE
Sbjct: 301 SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQVYEEGLE 360

Query: 361 CVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVYEKALTLGHITDDLAC 420
            VPSS +FSLYV+FLM+++  VKGEQ+SGLSS T N  SRLLMVYEKALTLGHITDDLAC
Sbjct: 361 HVPSSAMFSLYVEFLMNVITSVKGEQSSGLSSCTMNTTSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYV FYL+LG+LDEA KLAERLCSGK SNSVKLWVLRVSTEIK ILKDSPSPSKDDL SI
Sbjct: 421 QYVSFYLQLGKLDEACKLAERLCSGKLSNSVKLWVLRVSTEIKSILKDSPSPSKDDLTSI 480

Query: 481 FELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKE+LRDFSVSESGSLWLTVLKFFANQS+YFD+LVEISLLALAKSGG+EDGFSLSSA
Sbjct: 481 FELTKEILRDFSVSESGSLWLTVLKFFANQSHYFDQLVEISLLALAKSGGSEDGFSLSSA 540

Query: 541 IVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDKDGLANARKLFES 600
           IVDFVLQKDGIQR+REVYKKFLGLPHPGLA+Y+TCIQLESNLAS GDK+GLA+ARKLFES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYRTCIQLESNLASAGDKNGLASARKLFES 600

Query: 601 ALATYSQDVSLWQEYYTMESEIGSSETAAAIRWRARKTLKDVTGLVTSSDL 652
           ALATY QDVSLWQEYY MES++GSSETAAAIRWRARKTLKD T L TSSDL
Sbjct: 601 ALATYGQDVSLWQEYYIMESKVGSSETAAAIRWRARKTLKDATALATSSDL 651

[Close]

BLAST of ClCG01G021860 vs. ExPASy Swiss-Prot
Match: Q9NYH9 (U3 small nucleolar RNA-associated protein 6 homolog OS=Homo sapiens OX=9606 GN=UTP6 PE=1 SV=2)

HSP 1 Score: 180.3 bits (456), Expect = 7.2e-44
Identity = 161/653 (24.66%), Postives = 281/653 (43.03%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MA+++Q R+E  + EL+ LE+ GLFS  EI  I+K+    EY+++R    K+D++ Y+ Y
Sbjct: 1   MAEIIQERIEDRLPELEQLERIGLFSHAEIKAIIKKASDLEYKIQRRTLFKEDFINYVQY 60

Query: 61  ETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E +L  L   R+  +    KK    ++  SI     V R+  +++ A  ++K D+ LW  
Sbjct: 61  EINLLELIQRRRTRIGYSFKKD---EIENSI-----VHRVQGVFQRASAKWKDDVQLWLS 120

Query: 121 YLEFCRA-RKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVC 180
           Y+ FC+      R+ KV + ++  H   P +WI AA WE +   + ++AR L L  LR  
Sbjct: 121 YVAFCKKWATKTRLSKVFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFH 180

Query: 181 PTSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENIAAEEKQWREENKDLFMSMVE 240
           P    L+ EY RMEL +  KL+              +E    E+     EN D    +++
Sbjct: 181 PECPKLYKEYFRMELMHAEKLR--------------KEKEEFEKASMDVENPDYSEEILK 240

Query: 241 AREDNDGSDVETESKNKLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEILEAMDLA 300
                                      +   IY  ++  +  +      +L I +  D A
Sbjct: 241 -------------------------GELAWIIYKNSVSIIKGA-EFHVSLLSIAQLFDFA 300

Query: 301 HSEEMQSKILQDIKRDFATEPEFWDWLARLQCNPEN-VQGMDDTKEISRI------EKAV 360
             +++Q +I  D++     +P  WD++AR +   E+  +    TK+   +      E+  
Sbjct: 301 --KDLQKEIYDDLQALHTDDPLTWDYVARRELEIESQTEEQPTTKQAKAVEVGRKEERCC 360

Query: 361 QVYEEGLECVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVYEKALTLG 420
            VYEE ++ +P+  ++  Y+ F +      +  + S           R + V+ KA  L 
Sbjct: 361 AVYEEAVKTLPTEAMWKCYITFCLE-----RFTKKSNSGFLRGKRLERTMTVFRKAHELK 420

Query: 421 HITDDLACQYVLFYLELGRLDEARKLAERLCSGK--FSNSVKLWVLRVSTEIKCILKDSP 480
            +++   CQY    + L   +  R+  E   +G   F +S  +W L++      +L +S 
Sbjct: 421 LLSE---CQYKQLSVSLLCYNFLREALEVAVAGTELFRDSGTMWQLKLQ-----VLIESK 480

Query: 481 SPSKDDLKSIFELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLALAKSGG 540
           SP   D+  +FE   E            LW++  ++     +  D         LA  G 
Sbjct: 481 SP---DIAMLFE---EAFVHLKPQVCLPLWISWAEWSEGAKSQEDTEAVFKKALLAVIGA 540

Query: 541 NEDGFSLSSAIVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDKDG 600
             D  +L +  +D+  +  G +++R V+K         +  ++  IQ E    S      
Sbjct: 541 --DSVTLKNKYLDWAYRSGGYKKARAVFKSLQESRPFSVDFFRKMIQFEKEQESC----N 578

Query: 601 LANARKLFESALATY-SQDVSLWQEYYTME--SEIGSSETAAAIRWRARKTLK 641
           +AN R+ +E AL  + S D  LW +Y   E    +G  E    I WRA K L+
Sbjct: 601 MANIREYYERALREFGSADSDLWMDYMKEELNHPLGRPENCGQIYWRAMKMLQ 578

[Close]

BLAST of ClCG01G021860 vs. ExPASy Swiss-Prot
Match: Q8VCY6 (U3 small nucleolar RNA-associated protein 6 homolog OS=Mus musculus OX=10090 GN=Utp6 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.8e-42
Identity = 159/654 (24.31%), Postives = 287/654 (43.88%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MA+++Q R+E  + EL+ LE+ GLFS  EI  I+K+    EY++ R   LK+D++ Y+ Y
Sbjct: 1   MAEIIQERIEDRIPELEQLERIGLFSHAEIKAIIKKASDLEYKIHRRTLLKEDFINYVQY 60

Query: 61  ETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E +L  L   R+  +    KK           +++ V R+  ++  A  ++K D+ LW  
Sbjct: 61  EINLLELIQRRRARIKYSFKKDE--------IEYSMVHRVQGVFGRASAKWKDDVQLWLS 120

Query: 121 YLEFCRA-RKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVC 180
           Y+ FC+       + K+ + ++  H   P +WI AA WE +   + ++AR L L  LR  
Sbjct: 121 YIVFCKKWGTKTHLSKIFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFH 180

Query: 181 PTSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENIAAEEKQWREENKDLFMSMVE 240
           P    L+ EY RMEL +  KL+                    +EKQ  E+          
Sbjct: 181 PECPKLYQEYFRMELMHAEKLR--------------------KEKQEFEK---------A 240

Query: 241 AREDNDGSDVETESKNKLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEILEAMDLA 300
           A +  D    E   K +L             IY  +I  +  +      +L I +  D A
Sbjct: 241 AMDMGDFDHPEEILKGEL----------ARIIYKNSISKIKGA-EFHVSLLAIAQLFDFA 300

Query: 301 HSEEMQSKILQDIKRDFATEPEFWDWLARLQCNPENVQGMDDTKEISRIEKAVQ------ 360
             +++Q +I  D++     +P  WD++AR +   E+  G  + + +S+  KAV+      
Sbjct: 301 --KDLQKEIYDDLQALHTDDPLTWDYVARRELEIESQPG--EEQPVSKQAKAVEMGRREE 360

Query: 361 ----VYEEGLECVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVYEKAL 420
               VYEE ++ +P+  ++  Y+ F +   +    ++TS +    + +  R ++ + KA 
Sbjct: 361 RCCAVYEEAVKALPTEAMWKCYITFCLERFS----KKTSSVPLRGQRL-ERTMLAFRKAH 420

Query: 421 TLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVSTEIKCILKDS 480
            L  +++    Q++   L      EA ++AE   +  F +SV +W  ++      +L DS
Sbjct: 421 ELKLLSEVQYKQWIDLLLRQDLFKEALQVAE-AGTELFKDSVTMWQTKLQ-----VLIDS 480

Query: 481 PSPSKDDLKSIFELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLALAKSG 540
            SP   D++  FE   E            LW++  ++  +  +  D         +A +G
Sbjct: 481 KSP---DVEMRFE---EAFAHLKPQVCLPLWISWAEWSESAKSQEDTEAIFKKAIIAVTG 540

Query: 541 GNEDGFSLSSAIVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDKD 600
            +    +L    +D+  +  G +++R V+K         +  ++  +Q E       +  
Sbjct: 541 AS--SVTLKEKYLDWAYRSGGYKKARAVFKSLQESRPFSVEFFRKMMQFEKE----QEPC 579

Query: 601 GLANARKLFESALATY-SQDVSLWQEYYTME--SEIGSSETAAAIRWRARKTLK 641
            + N R+ +E AL  + + D  LW +Y   E     G  E    I WRA K L+
Sbjct: 601 KMVNLREYYERALREFGTSDSDLWMDYIKEELNHPFGKPENCGQIYWRAMKMLQ 579

[Close]

BLAST of ClCG01G021860 vs. ExPASy Swiss-Prot
Match: Q54WN5 (U3 small nucleolar RNA-associated protein 6 homolog OS=Dictyostelium discoideum OX=44689 GN=utp6 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 7.8e-30
Identity = 157/673 (23.33%), Postives = 289/673 (42.94%), Query Frame = 0


Query: 3   DVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYET 62
           D V F ++ +++E   L   G+ S++E  +I+K+R   E ++      K D+L YI YE 
Sbjct: 2   DRVNFSIDQLLEETSKLVSLGIISKQECKDIMKKREYHEIKIFNRNSHKSDFLTYIKYEL 61

Query: 63  HLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFRYL 122
            L+ L   R KA   E   +    +R +I           ++  A  ++  D  LW   L
Sbjct: 62  ELDRLFHKRGKAKNIEFDYRLRSALRHAI----------ILFGSATKKFPKDEALWINAL 121

Query: 123 --EFCRARKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 182
                RA K G  +     L    P+   +W  AA +EF+ N N+  AR+L+ +G++   
Sbjct: 122 NIRMKRASKEGTGRLFSIALSNL-PRSAKLWKLAATFEFEVNKNIQNARNLIQAGIQFNK 181

Query: 183 TSEDLWVEYLRMELTYLNKLKAR----KVALGEDEGSLVRENIAAEEKQWREENKDLFMS 242
           T + LW  +  MELTY++ L +        + E+E   ++ N+ +  K  + E KD F++
Sbjct: 182 TDKSLWHYFFLMELTYISLLFSDITFIDKKIEEEEEEAIKLNLDSLRKSEKIE-KDEFIT 241

Query: 243 MVEAREDNDGSDVETESKNK-LDLFREQGSNILETIYSGAIE-ALPSSFSLRKRVLEIL- 302
                    G ++ +  K K   L R Q   I + ++  AI+ ++   F  RK   +I  
Sbjct: 242 F--------GKEILSADKLKQSSLIRGQ---IAQIVFRKAIKSSIGQDFDFRKHFYKIAS 301

Query: 303 EAMDLAHSEE--------MQSKILQDIKRDFATEPEFWDWLARLQCNPENVQGMDDTKEI 362
           + +D+    E        +Q +IL+ +  DF  + + + +LA ++ +  +   +     +
Sbjct: 302 KFLDIGKDSENPMGAGELLQKEILESLVTDFPNDDKTYIFLASIEQSKSSEPSL-----L 361

Query: 363 SRIEKAVQVYEEGLECVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVY 422
            R+  + ++  +GL  + S +    Y+ F+  I+  +K ++   +    ENI   LL  Y
Sbjct: 362 KRLNNSTKILNQGLTIIKSESYLFNYIHFIRQIIVDIKLKENKLI----ENITDILLKAY 421

Query: 423 EKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVSTEIKCI 482
           + ++    + +     Y+   LELG+ ++A K++E      F NS +LW  R++  IK  
Sbjct: 422 KYSIDNNILKESGYQYYIELLLELGKTNDAIKVSEESVK-LFKNSNQLWNQRINLLIK-- 481

Query: 483 LKDSPSPSKDDLKSIFELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLAL 542
                           E+  ++  + S +              N+ N  DK  E+++   
Sbjct: 482 ---------------NEMVVKLFDNLSNN--------------NEYNNIDKCFEMAVKNC 541

Query: 543 AKSGGNEDGFSLSSAIVDFVLQKDGIQ---RSREVYKKFLGLPHPGL----AMYQTCIQL 602
             S  +    + +S+  +  ++    Q   +  + YKK + L    L      YQ CI  
Sbjct: 542 TSSTTSTTSSTSTSSSSNLFIEYFKYQVVFKFDKDYKKIVDLFEKLLKQLDEFYQKCILY 601

Query: 603 ESNLASVGDKDGLANARKLFESALA---TYSQDVSLWQEYYTME-SEIGSSETAAAIRWR 648
           E        +  + + R L+E  L+     S+DV +W  Y   E    G  E A  I  R
Sbjct: 602 EEERI----EKNINDIRSLYEKCLSIKEISSKDVDVWLNYRNFELKSAGDIERANTIATR 606

[Close]

BLAST of ClCG01G021860 vs. ExPASy Swiss-Prot
Match: O60188 (U3 small nucleolar RNA-associated protein 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp6 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 3.9e-29
Identity = 89/262 (33.97%), Postives = 139/262 (53.05%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MA+ VQ+ +E  V EL+DL ++ +F+R EI  I+K RR FE +L R      D+L+YI Y
Sbjct: 1   MAEKVQYYMEQSVPELEDLLEKNIFNRDEINNIIKTRRVFEEKLARRQVKLNDFLSYIQY 60

Query: 61  ETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E +LE+LR+ R K +        N   + +ISD+AG +++L+++  A  ++ GD+ LW  
Sbjct: 61  EINLETLRAKRHKRL--------NITGKITISDYAGPRKVLFLFLRATNKFFGDVTLWLD 120

Query: 121 YLEFCRARKN-GRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVC 180
           Y+ + +  K    + K+    ++ HP    +W+ A   EF  N+NV AAR+LM   LR+ 
Sbjct: 121 YIHYAQKIKAVNIVGKICVAALQKHPNNAELWVVACDHEFSINANVSAARALMNRALRLN 180

Query: 181 PTSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENI--AAEEKQWREENKDLFMSM 240
             +  +W  Y R+EL+Y+ KL AR   L  +  S   ENI     E      + D     
Sbjct: 181 QENPVIWAAYFRLELSYMTKLFARSQILTGNISSKT-ENITNGVSEDTIGSLSSDTIQLP 240

Query: 241 VEAREDNDGSDVETESKNKLDL 260
           + + E+  GS      KN  DL
Sbjct: 241 MVSMEEFLGSSSSEVRKNDSDL 253

[Close]

BLAST of ClCG01G021860 vs. ExPASy Swiss-Prot
Match: Q02354 (U3 small nucleolar RNA-associated protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP6 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 4.7e-27
Identity = 73/235 (31.06%), Postives = 127/235 (54.04%), Query Frame = 0


Query: 6   QFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYETHLE 65
           ++ LE  + E+DDL ++GLF++ E++ I+K+R  FE+RL        DY+ YI+YE+++ 
Sbjct: 5   RYYLEQCIPEMDDLVEKGLFTKNEVSLIMKKRTDFEHRLNSRGSSINDYIKYINYESNVN 64

Query: 66  SLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFRYLEFC 125
            LR+ R K +          K   S+SD++  +RI +IY+    ++  D+  W  YL + 
Sbjct: 65  KLRAKRCKRIL-------QVKKTNSLSDWSIQQRIGFIYQRGTNKFPQDLKFWAMYLNYM 124

Query: 126 RARKN----GRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPT 185
           +AR N     ++  +  QL++ HP    +WI  A +E++ ++N  + R++  +GLR  P 
Sbjct: 125 KARGNQTSYKKIHNIYNQLLKLHPTNVDIWISCAKYEYEVHANFKSCRNIFQNGLRFNPD 184

Query: 186 SEDLWVEYLRMELTYLNKLKARKVALG---EDEGSLVRENIAAEEKQWREENKDL 234
              LW EY++ EL ++ KL  R+  +G   E E  L  +N     +   EE   L
Sbjct: 185 VPKLWYEYVKFELNFITKLINRRKVMGLINEREQELDMQNEQKNNQAPDEEKSHL 232

[Close]

BLAST of ClCG01G021860 vs. ExPASy TrEMBL
Match: A0A0A0KJV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513630 PE=3 SV=1)

HSP 1 Score: 1165.2 bits (3013), Expect = 0.0e+00
Identity = 590/651 (90.63%), Postives = 615/651 (94.47%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGMVDELDD E+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDY
Sbjct: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  ETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E  LESLR LRKKAVA ELKKQG+KKM+KSISDFAGVKRILYIYRLAVTRYKGDIDLWFR
Sbjct: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRARKNG MKKVLAQLIRFHPK+PGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENIAAEEKQWREENKDLFMSMVEA 240
           TSEDLW+EYLRMELTYLNKLKARKVALGEDEGSLVRENI A EKQWREENKDLFMSM E 
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240

Query: 241 REDNDGSDVETESKNKLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R DND S VET SK+KLDLFRE+GSN+LETIYSGAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFATEPEFWDWLARLQCNPENVQGMDDTKEISRIEKAVQVYEEGLE 360
           SEEMQSKILQDIKRDFA++P++WDWLARL CNPENVQG  D KEISRIEKAV+VYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360

Query: 361 CVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVYEKALTLGHITDDLAC 420
           CVPSS IFSLYV+FL SI+ PVKGEQT GLSSHT+NI SRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEA+KLAERLCSGKFSNSVKLWVLRVSTEIKC+LKDSPSPSKDDLKSI
Sbjct: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480

Query: 481 FELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKEVL+ FSVSESGSLWL VLKFFANQS YFDKLVEISL ALAKSGGNEDGFSLSS 
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDKDGLANARKLFES 600
           IVDFVLQKDGIQR+REVYKKFLGLPHPGLAMYQTCIQLESNLA+ GDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALATYSQDVSLWQEYYTMESEIGSSETAAAIRWRARKTLKDVTGLVTSSDL 652
           ALATY Q+V LWQEYYT+ES+IGSSETAAA+RWRARKTLKD T L TSSDL
Sbjct: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]

BLAST of ClCG01G021860 vs. ExPASy TrEMBL
Match: A0A5D3CNA4 (U3 small nucleolar RNA-associated protein 6-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006370 PE=3 SV=1)

HSP 1 Score: 1153.3 bits (2982), Expect = 0.0e+00
Identity = 584/651 (89.71%), Postives = 614/651 (94.32%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGMVDELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDY
Sbjct: 1   MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  ETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E  L+SLR LR+KAVA ELKKQGNKKMR SISDFAGVKRILYIYRLAV+RYKGDIDLWFR
Sbjct: 61  EIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRARKNGRMKKVLAQLIRFHPK+PGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENIAAEEKQWREENKDLFMSMVEA 240
           TSEDLW+EYLRMELTYLNKLKARKVALGEDEGSLVRENI A EKQWREENKDLFMSM E 
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGET 240

Query: 241 REDNDGSDVETESKNKLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R D+DGS VET SKNKLDLFRE+GSNILETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFATEPEFWDWLARLQCNPENVQGMDDTKEISRIEKAVQVYEEGLE 360
           SEEMQSKILQDIKRDFA++P++WDWLARL+ NPENVQG  D KEISRIE+AV+VYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLE 360

Query: 361 CVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVYEKALTLGHITDDLAC 420
           C+PSS +FSLYVKFL SI+ PVKGEQT GLSSHTENI SRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEA++LA+RLCSGKFSNSVKLW LRVSTEIKC  KDSPSPSK+DLKSI
Sbjct: 421 QYVLFYLELGRLDEAQELAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSI 480

Query: 481 FELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKEVL+ FSVSESGSLWL VLKFFANQS YFDKLVEISLLALAKSGGNEDGFSLSS 
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDKDGLANARKLFES 600
           IVDFVLQKDGIQ +REVYKKFLGLPHPGLAMYQTCIQLESNLA+ GDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALATYSQDVSLWQEYYTMESEIGSSETAAAIRWRARKTLKDVTGLVTSSDL 652
           AL TY Q+VSLWQEYYT+ES+IGSSETAAA+RWRARKTLKD T L TSSDL
Sbjct: 601 ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]

BLAST of ClCG01G021860 vs. ExPASy TrEMBL
Match: A0A1S3B0R2 (U3 small nucleolar RNA-associated protein 6 homolog OS=Cucumis melo OX=3656 GN=LOC103484621 PE=3 SV=1)

HSP 1 Score: 1153.3 bits (2982), Expect = 0.0e+00
Identity = 584/651 (89.71%), Postives = 614/651 (94.32%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGMVDELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDY
Sbjct: 1   MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  ETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E  L+SLR LR+KAVA ELKKQGNKKMR SISDFAGVKRILYIYRLAV+RYKGDIDLWFR
Sbjct: 61  EIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRARKNGRMKKVLAQLIRFHPK+PGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENIAAEEKQWREENKDLFMSMVEA 240
           TSEDLW+EYLRMELTYLNKLKARKVALGEDEGSLVRENI A EKQWREENKDLFMSM E 
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGET 240

Query: 241 REDNDGSDVETESKNKLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R D+DGS VET SKNKLDLFRE+GSNILETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFATEPEFWDWLARLQCNPENVQGMDDTKEISRIEKAVQVYEEGLE 360
           SEEMQSKILQDIKRDFA++P++WDWLARL+ NPENVQG  D KEISRIE+AV+VYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLE 360

Query: 361 CVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVYEKALTLGHITDDLAC 420
           C+PSS +FSLYVKFL SI+ PVKGEQT GLSSHTENI SRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEA++LA+RLCSGKFSNSVKLW LRVSTEIKC  KDSPSPSK+DLKSI
Sbjct: 421 QYVLFYLELGRLDEAQELAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSI 480

Query: 481 FELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKEVL+ FSVSESGSLWL VLKFFANQS YFDKLVEISLLALAKSGGNEDGFSLSS 
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDKDGLANARKLFES 600
           IVDFVLQKDGIQ +REVYKKFLGLPHPGLAMYQTCIQLESNLA+ GDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALATYSQDVSLWQEYYTMESEIGSSETAAAIRWRARKTLKDVTGLVTSSDL 652
           AL TY Q+VSLWQEYYT+ES+IGSSETAAA+RWRARKTLKD T L TSSDL
Sbjct: 601 ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]

BLAST of ClCG01G021860 vs. ExPASy TrEMBL
Match: A0A6J1CMJ8 (U3 small nucleolar RNA-associated protein 6 homolog OS=Momordica charantia OX=3673 GN=LOC111012347 PE=3 SV=1)

HSP 1 Score: 1152.1 bits (2979), Expect = 0.0e+00
Identity = 580/651 (89.09%), Postives = 618/651 (94.93%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAY+DY
Sbjct: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYVDY 60

Query: 61  ETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           ETHL+SLR+LRKKAVA ELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR
Sbjct: 61  ETHLDSLRNLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCR ++NGRMKKVLAQLIRFHPK+PGVWIYAAAWEFDHN+NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRGQQNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENIAAEEKQWREENKDLFMSMVEA 240
           TSEDLWVEYLRMELTYLNKLKARKVALGED+GSLVREN AAEEKQWREENKDLFMS+ E 
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENRAAEEKQWREENKDLFMSIGEE 240

Query: 241 REDNDGSDVETESKNKLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           RE+NDGS VETESK++LDLFREQGSNILETIY+GAIEALPSSFSLRKRVLEILEAMDL+H
Sbjct: 241 RENNDGSVVETESKDQLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLSH 300

Query: 301 SEEMQSKILQDIKRDFATEPEFWDWLARLQCNPENVQGMDDTKEISRIEKAVQVYEEGLE 360
           SEEM SKILQD+KRDF T+P++WDWLARL+CNPENVQGM D KEIS+IEKAVQVYEE LE
Sbjct: 301 SEEMHSKILQDLKRDFGTQPQYWDWLARLECNPENVQGMSDGKEISQIEKAVQVYEEALE 360

Query: 361 CVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVYEKALTLGHITDDLAC 420
           C+PSST+FSLYV+FLM+I+ PVKG+ TSGLSS+T NI SRLL+VYEKALTLGHIT+DL C
Sbjct: 361 CLPSSTMFSLYVEFLMNIITPVKGKHTSGLSSYTVNITSRLLVVYEKALTLGHITEDLGC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYV FYL+LGRLDEARKLAERLCSGK SNSVKLWVLRVS EIKCILKDSPSPSKDD+KSI
Sbjct: 421 QYVSFYLQLGRLDEARKLAERLCSGKLSNSVKLWVLRVSNEIKCILKDSPSPSKDDMKSI 480

Query: 481 FELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTK+VLRDFSVSES SLWL VL FFANQS YFDKL+EISLLALAK GG+EDGFSLSS 
Sbjct: 481 FELTKDVLRDFSVSESESLWLVVLNFFANQSYYFDKLLEISLLALAKYGGSEDGFSLSST 540

Query: 541 IVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDKDGLANARKLFES 600
           IVDFVLQKDGIQR+REVYKKFLGLPHPG AMY+TCIQLESNLAS GDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGRAMYRTCIQLESNLASAGDKDGLANARKLFES 600

Query: 601 ALATYSQDVSLWQEYYTMESEIGSSETAAAIRWRARKTLKDVTGLVTSSDL 652
           AL TY QDVSLWQEY  ME++IGSSETAAAIRWRARKTLKD T LVTSSDL
Sbjct: 601 ALTTYDQDVSLWQEYCIMEAKIGSSETAAAIRWRARKTLKDATALVTSSDL 651

[Close]

BLAST of ClCG01G021860 vs. ExPASy TrEMBL
Match: A0A6J1KQP1 (U3 small nucleolar RNA-associated protein 6 homolog OS=Cucurbita maxima OX=3661 GN=LOC111496770 PE=3 SV=1)

HSP 1 Score: 1134.4 bits (2933), Expect = 0.0e+00
Identity = 575/651 (88.33%), Postives = 616/651 (94.62%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGM+DELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY+AYIDY
Sbjct: 1   MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDY 60

Query: 61  ETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           ETHL+SLR LRKKAV+ ELKKQGNKKMRKS+SDFA VKRILYIYRLAV+RYKGDIDLWFR
Sbjct: 61  ETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRA+KNGRMKKVLAQLIRFHPK+PGVWIYAAAWEFDH++NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENIAAEEKQWREENKDLFMSMVEA 240
           TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVREN AAE+KQWREENKDLFMS+ E 
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGED 240

Query: 241 REDNDGSDVETESKNKLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           REDNDGS  ETESKNKLDLFRE+GSNILETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 REDNDGSVGETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFATEPEFWDWLARLQCNPENVQGMDDTKEISRIEKAVQVYEEGLE 360
           SEE+ SKILQDIKRDF TEP++WDWLARL+ NP++VQGM D K+ SRIEKAVQVYEEGLE
Sbjct: 301 SEELHSKILQDIKRDFGTEPQYWDWLARLRYNPDDVQGMSDKKKNSRIEKAVQVYEEGLE 360

Query: 361 CVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVYEKALTLGHITDDLAC 420
            VPSS +FSLYV+FLM+++  VKGEQ+SGLSS T N  SRLLMVYEKALT GHITDDLAC
Sbjct: 361 HVPSSAMFSLYVEFLMNVITSVKGEQSSGLSSCTMNTTSRLLMVYEKALTSGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYV FY +LG+LDEARKLA+RLCSGK SNSVKLWVLRVSTEIK ILKDSPSPSKDDLKSI
Sbjct: 421 QYVSFYFQLGKLDEARKLAKRLCSGKLSNSVKLWVLRVSTEIKSILKDSPSPSKDDLKSI 480

Query: 481 FELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKEVLRDFSVSESGSLWLTVLKFFANQS+YFD+LVEISL ALAKSGG+EDGFSLSSA
Sbjct: 481 FELTKEVLRDFSVSESGSLWLTVLKFFANQSHYFDQLVEISLFALAKSGGSEDGFSLSSA 540

Query: 541 IVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDKDGLANARKLFES 600
           IVDF+LQKDGIQR+REVYKKFL LPHPGLA+Y+TCIQLESNLAS GDK+GLA+ARKLFES
Sbjct: 541 IVDFILQKDGIQRTREVYKKFLRLPHPGLAIYRTCIQLESNLASAGDKNGLASARKLFES 600

Query: 601 ALATYSQDVSLWQEYYTMESEIGSSETAAAIRWRARKTLKDVTGLVTSSDL 652
           ALATY QDVSLWQEYY MES++GSSETAAAIRWRARKTLKD T L TSSDL
Sbjct: 601 ALATYGQDVSLWQEYYIMESKVGSSETAAAIRWRARKTLKDATALATSSDL 651

[Close]

BLAST of ClCG01G021860 vs. TAIR 10
Match: AT4G28200.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), U3 small nucleolar RNA-associated protein 6 (InterPro:IPR013949); Has 492 Blast hits to 480 proteins in 206 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). )

HSP 1 Score: 745.7 bits (1924), Expect = 3.1e-215
Identity = 377/650 (58.00%), Postives = 499/650 (76.77%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQ+RLE MVDELDDLE+R +F+R EIAEIVKQRRKFEYRLKRP PLK+D++AYIDY
Sbjct: 1   MADVVQYRLERMVDELDDLERREIFTRAEIAEIVKQRRKFEYRLKRPSPLKEDFIAYIDY 60

Query: 61  ETHLESLRSLRKKAVASELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E  L+ LR LR+K+VA   K    K+ +KS+SDFAGV RI+ IYRLA  RYKGDI+LWFR
Sbjct: 61  EVKLDELRQLRRKSVARVTK----KRKKKSVSDFAGVARIVEIYRLATMRYKGDINLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFC+ +++GRMKK LAQ IRFHPK+ GVWIYAA+WEFD N NV AAR+LML+GLRVC 
Sbjct: 121 YLEFCKQKRHGRMKKALAQAIRFHPKVAGVWIYAASWEFDRNLNVTAARALMLNGLRVCS 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENIAAEEKQWREENKDLFMSMVE- 240
            SEDLWVEYLRMELT+LNKLKARKVALGED+GSLVR+    E++QW++ENK+LFMS+ E 
Sbjct: 181 NSEDLWVEYLRMELTFLNKLKARKVALGEDKGSLVRDTKTVEDEQWKDENKELFMSLDEK 240

Query: 241 ---AREDNDGSDVETESKN---KLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEIL 300
               +E+ND   +  + ++   K+D  +E+GSN+L+TIYSGA+EA+PSSF LRKR LEIL
Sbjct: 241 EGNEKEENDEDSIVEDVEDVTEKVDFLKEKGSNVLQTIYSGAVEAIPSSFDLRKRFLEIL 300

Query: 301 EAMDLAHSEEMQSKILQDIKRDFATEPEFWDWLARLQCNP--ENVQGMDDTKEISRIEKA 360
           EA DLAHS+EM++ IL D+KRDF  EPE+W+WLAR + +    N  G++      +++KA
Sbjct: 301 EATDLAHSDEMRNTILSDLKRDFCNEPEYWNWLARHEMSGCISNEAGLEFAN--PQMQKA 360

Query: 361 VQVYEEGLECVPSSTIFSLYVKFLMSIVAPVKGEQTSGLSSHTENIASRLLMVYEKALTL 420
           +QV+EEGL+ V SS++F +Y+ FLM  +    G++   +SS +  I S ++ VY+KA   
Sbjct: 361 IQVFEEGLQTVTSSSMFEIYINFLMEAIVQSNGDENE-ISSLSNPIISHIINVYQKADET 420

Query: 421 GHITDDLACQYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVSTEIKCILKDSPS 480
           G +T++LA +YV  YL+L +  EA+KLAE+LCS KF+ S KLW+ RVS EI+  L ++ S
Sbjct: 421 GCLTEELADEYVSLYLKLEKTHEAQKLAEKLCSEKFAGSAKLWLSRVSIEIRS-LSENSS 480

Query: 481 PSKDDLKSIFELTKEVLRDFSVSESGSLWLTVLKFFANQSNYFDKLVEISLLALAKSGGN 540
           PSK D +++FEL    LR   +SES SLWL    FFA+Q  Y DKLVE+S+L+  KS G+
Sbjct: 481 PSKADFQTVFELLSNALRKVPISESESLWLMAFNFFAHQRTYLDKLVEMSILSATKSHGS 540

Query: 541 EDGFSLSSAIVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDKDGL 600
           +  FSL+S +V FVL+  G   +R++YK+FL LP P L +Y+ CI++E+NL SVGDKDGL
Sbjct: 541 DHVFSLASTVVKFVLETKGAHSARKIYKRFLALPGPSLVLYKGCIEIETNLISVGDKDGL 600

Query: 601 ANARKLFESALATYSQDVSLWQEYYTMESEIGSSETAAAIRWRARKTLKD 642
           +NARKL++SA+A+Y QDV LW+ YY++E+++G+SETA  + WRARKTL +
Sbjct: 601 SNARKLYDSAVASYGQDVELWKNYYSLETKLGTSETANGVYWRARKTLNE 642

[Close]

BLAST of ClCG01G021860 vs. TAIR 10
Match: AT4G03430.1 (pre-mRNA splicing factor-related )

HSP 1 Score: 46.6 bits (109), Expect = 8.9e-05
Identity = 110/525 (20.95%), Postives = 201/525 (38.29%), Query Frame = 0


Query: 132 RMKKVLAQLIRFHPKIPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLR 191
           R + +   L + +PK P  WI AA  E + +  + AAR  +  G   CP +ED+W+E   
Sbjct: 371 RARLLYKSLTQSNPKNPNGWIAAARVE-EVDGKIKAARFQIQRGCEECPKNEDVWLE--- 430

Query: 192 MELTYLNKLKARKVALGEDEGSLVREN---IAAEEKQWREENKDLFMSMVEAREDNDGSD 251
                     A ++A  ED   ++ +    I    K W E  K       ++R    G +
Sbjct: 431 ----------ACRLANPEDAKGVIAKGVKLIPNSVKLWLEAAKLEHDVENKSRVLRKGLE 490

Query: 252 VETES----KNKLDLFREQGSNILETIYSGAIEALPSSFSLRKRVLEILEAMDLAHSEEM 311
              +S    K  ++L  E+ + IL      A+E  P         LE+  A+    +   
Sbjct: 491 HIPDSVRLWKAVVELANEEDARIL---LHRAVECCPLH-------LELWVALARLETYAE 550

Query: 312 QSKILQDIKRDFATEPEFWDWLARL-QCNPENVQGMDDTKEISR-IEKAVQVYE-EGLEC 371
             K+L   +     EP  W   A+L + N +  +  D+T  + + I++ ++  + EG+  
Sbjct: 551 SKKVLNKAREKLPKEPAIWITAAKLEEANGKLDEANDNTAMVGKIIDRGIKTLQREGVVI 610

Query: 372 VPSSTIFSLYVKFLMSIVAPVKG--EQTSGLSSHTENIASRLLMVYEKALTLGHITDDLA 431
              + +        +  VA  +   + T G+    E+     +   ++    G I    A
Sbjct: 611 DRENWMSEAEACERVGSVATCQAIIKNTIGIGVEEEDRKRTWVADADECKKRGSIETARA 670

Query: 432 CQYVLFYLELGRLDEARKLAERLCSGKFSNSVKLWVLRVST-----EIKCILKDSPSPSK 491
                  + L +     K A+   S     S+   + +  T     E+  ++        
Sbjct: 671 IYAHALSVFLTKKSIWLKAAQLEKSHGSRESLDALLRKAVTYVPQAEVLWLMGAKEKWLA 730

Query: 492 DDLKSIFELTKEVLRDFSVSESGSLWLTVLKF-FANQSNYFDKLVEISLLALAKSGGNED 551
            D+ +   + +E     ++  S  +WL   K  F N+     ++    LLA A+  G  +
Sbjct: 731 GDVPAARAILQEAYA--AIPNSEEIWLAAFKLEFENKEPERARM----LLAKARERGGTE 790

Query: 552 GFSLSSAIVDFVLQKDGIQRSREVYKKFLGLPHPGLAMYQTCIQLESNLASVGDK-DGLA 611
              + SAIV+  L    ++  R        L + GL  + T  +L   L  + ++   L 
Sbjct: 791 RVWMKSAIVEREL--GNVEEERR-------LLNEGLKQFPTFFKLWLMLGQLEERFKHLE 850

Query: 612 NARKLFESALATYSQDVSLWQEYYTMESEIGSSETAAAIRWRARK 638
            ARK +++ L      + LW     +E ++     A AI   ARK
Sbjct: 851 QARKAYDTGLKHCPHCIPLWLSLADLEEKVNGLNKARAILTTARK 856

The following BLAST results are available for this feature:

BLAST of ClCG01G021860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883020.1	0.0e+00	93.56	U3 small nucleolar RNA-associated protein 6 homolog [Benincasa hispida]	[more]
XP_004134769.1	0.0e+00	90.63	U3 small nucleolar RNA-associated protein 6 homolog [Cucumis sativus] >KGN49099....	[more]
XP_008440018.1	0.0e+00	89.71	PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Cucumis melo] >T...	[more]
XP_022142158.1	0.0e+00	89.09	U3 small nucleolar RNA-associated protein 6 homolog [Momordica charantia]	[more]
XP_023517938.1	0.0e+00	89.25	U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG01G021860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NYH9	7.2e-44	24.66	U3 small nucleolar RNA-associated protein 6 homolog OS=Homo sapiens OX=9606 GN=U...	[more]
Q8VCY6	1.8e-42	24.31	U3 small nucleolar RNA-associated protein 6 homolog OS=Mus musculus OX=10090 GN=...	[more]
Q54WN5	7.8e-30	23.33	U3 small nucleolar RNA-associated protein 6 homolog OS=Dictyostelium discoideum ...	[more]
O60188	3.9e-29	33.97	U3 small nucleolar RNA-associated protein 6 OS=Schizosaccharomyces pombe (strain...	[more]
Q02354	4.7e-27	31.06	U3 small nucleolar RNA-associated protein 6 OS=Saccharomyces cerevisiae (strain ...	[more]

BLAST of ClCG01G021860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJV9	0.0e+00	90.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513630 PE=3 SV=1	[more]
A0A5D3CNA4	0.0e+00	89.71	U3 small nucleolar RNA-associated protein 6-like protein OS=Cucumis melo var. ma...	[more]
A0A1S3B0R2	0.0e+00	89.71	U3 small nucleolar RNA-associated protein 6 homolog OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1CMJ8	0.0e+00	89.09	U3 small nucleolar RNA-associated protein 6 homolog OS=Momordica charantia OX=36...	[more]
A0A6J1KQP1	0.0e+00	88.33	U3 small nucleolar RNA-associated protein 6 homolog OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of ClCG01G021860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28200.1	3.1e-215	58.00	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED I...	[more]
AT4G03430.1	8.9e-05	20.95	pre-mRNA splicing factor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003107	HAT (Half-A-TPR) repeat	SMART	SM00386	hat_new_1	coord: 163..195 e-value: 0.0045 score: 26.2 coord: 589..621 e-value: 0.0031 score: 26.7 coord: 95..127 e-value: 170.0 score: 6.4 coord: 549..581 e-value: 35.0 score: 11.4 coord: 346..377 e-value: 1.1 score: 18.3 coord: 430..463 e-value: 620.0 score: 2.3 coord: 128..160 e-value: 18.0 score: 13.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 49..207 e-value: 1.4E-14 score: 55.9 coord: 225..506 e-value: 1.7E-9 score: 39.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 530..649 e-value: 2.6E-6 score: 29.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 515..641
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 108..562
IPR013949	U3 small nucleolar RNA-associated protein 6	PFAM	PF08640	U3_assoc_6	coord: 9..93 e-value: 7.9E-26 score: 89.9
None	No IPR available	PANTHER	PTHR23271:SF1	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 6 HOMOLOG	coord: 1..638
None	No IPR available	PANTHER	PTHR23271	HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66	coord: 1..638

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G021860.1	ClCG01G021860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006396	RNA processing
cellular_component	GO:0034388	Pwp2p-containing subcomplex of 90S preribosome
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0030515	snoRNA binding