ClCG01G021760 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGGTAGAAAATAAATTAATCACAATTCTCCCAATTTCTCATTTAAGAAAATGGCTTTATTCTCATATTCCCTCTCCCCTAGTATTGTTCTAATTATGTCACAAATCCTAGCATCATTCCTGTGTGTGAAATCAACATGCCGAACCTCCTGCGGCAACATTCCGATCCATTATCCTTTCGGCATAGACGACGGCTGCGGCAGCCTCTATTACCGGAACCTCCTTTTCTGCTCAAATTCCGATAAATTAGAGCTCCGAACACCCACCGGAACATACCCTGTATCCGCCATTAGCTACTCCGATCCCTATATCCTAATCTCCGACCCGGACATGTGGGCCTGCCAAGACGGTCAAAATTTCCGCCCCACCCGACCCTTCATACTCGACCCGGAAACCCACCTCTCTGTTTCCCCTCTTAACGACTACCTCTTCTTCAACTGCAGCGAGGACCACGTAATGATCGCGCCCAAGCCGGTGTTCTGCGGGCGGTTCCCGGACCGGTGCGACGCGTCGTGTGACAGTGCGAGTTACTTGTGCACGCACGTGCCGGAGTGTGCGACGGCGCTGGGGGCAAGTTCTTGCTGCTCGTATCATCCGAAGGCCATGGATTCTTTGAAGCTGATGCTCAAATACTGCGCTAGCTATACTAGCGTGTATTGGAGGAGCGTTGGAGATGGGGATAATAATGATCAAGTTGCGGAGTACGGGATTCGGATTGATTTTGATTTTCTTGTAACAACTACTTGTCTTCGTTGCCAAGATGTTTTGAAGGGCGGTGGATCGTGTGGATTTCATGTTGAAACGTTGCAGTTCTTGTGCATTTGTGATGATAATAATAATGTCACTACTTATTGTCAAGGTATTATTCCTTCAATCTCTTTCCTTTCCATTATTTCTATTTCTTAGGTTAAATTTAATTTTGATTTTTGCGTCTATGATCCCTTTGATATTCATATACACTCTATTTGGTAATTATTTTAATTTTAACAAAAATTATATTTTTTTCCTCTACTATAGTTTTAAAATAAAATTACATTTTTAATCTTAGAATTTTGAAAAAAAAAAAAGTAATACTTAGTGCAGCTTAAGCCTCGTCTATATTCCTCTAATTTTTTTTATAAATTGTGAGCTTTGGTTGCACCAAGTTTTTTCTTTTAAAAAATATGTGCATTTGGGCCATAATAAAATGGTCAATTTGGTTTCTAGAGTTTTCAAAACATGAAATAGGTGCATTTCATCATTGAGTTTTCAAAATGTAAAATTTTAGTTTTCATATTTTGAAGAATAGATTTAAAGGTCATTATTATTTGAAATAATTTATATGACATTTTGAACTACAAGAGTAAGTTTAAAAAATAATTTTAGAGAGAAAAAAATAATTTTTAATATATATATTTTTTACTTTACAGTAATAATAATAAAAAAATAATCTATAACATTATTTCAAACCTATTTTTAAAATTTCACATACTAAAAAAAATATTTTGAAAACTTAATAATCAAATACATATATTCTAAAAAATTCGATGACTGAAAAATTATATTATAAGATTTAATGACCAAATACACATATTCTATAAAATTTGAGGGTTAAAAAGTTAAATTTCCTACTTTTTTTTGTCAATTGAGTTCTTAGTCAAATTTAAAAAATGAAAAGCAAAAATTTGAATACAATATTATAAACTTGTTTGGTTTATTAAAAAAAAAAATGGAATTGAATGAATGAAAGTAAAAACTATAAAACAGAATCATAAATGACTGGATTGAAAGCCGCAATCAAAATGGTTTATGAGTTTAGATATGATCTTTACCAAATACGTCCTTAGAGAACTATTTGGTGTGTTTTTTCTTGGAAGTACTTTCTATTTCTATTTAAGACTTAACTTATAATATAATCCTACTTCTTGAGAGAAAATGATTGGAGCTTATTACTTACATTACTGGCTTTTGACATGCAGATCGAAGCATGTGGAATGTTAGCAATAAGCACCGAATAATTGCAGGTAATTAATTTATGTTAAGTTCCTTAAACTTGAAGTTAATTGCGATTTGTTGTTAGAGGGCGTTTTGGTAAAATTGGAGTAGTAATTTATAGGGACAGTGAGTGCGGTATCAGCAGCTGGGGCATTGGGAATTGCAGCAACTATCTTGTTGTTGAAGAAACTTAAGAAGGCCAAAGCACCCGTCACATGTGGCGTTCAAACTAATGAGAACAGGCTTTTTTGATGACCATATTCAAACACACAGACACTTCTTCCCTTTCCCTACTTTCCTCTTTAATTATTTGCCTTTGCTTTCTTTCTCTAGTACTCAATAGATTCTTCTTTAATTTCAGCTCACACCCCCCACCATTTTTGCTACTTATTAATTCTAATCTTCCAACTCACATTTCCATCCGTCCATGTCGTGTCAAACTAAAAAACACTCATCTTCAATACTATATTTTCAGTTTAAG TTGGTAGAAAATAAATTAATCACAATTCTCCCAATTTCTCATTTAAGAAAATGGCTTTATTCTCATATTCCCTCTCCCCTAGTATTGTTCTAATTATGTCACAAATCCTAGCATCATTCCTGTGTGTGAAATCAACATGCCGAACCTCCTGCGGCAACATTCCGATCCATTATCCTTTCGGCATAGACGACGGCTGCGGCAGCCTCTATTACCGGAACCTCCTTTTCTGCTCAAATTCCGATAAATTAGAGCTCCGAACACCCACCGGAACATACCCTGTATCCGCCATTAGCTACTCCGATCCCTATATCCTAATCTCCGACCCGGACATGTGGGCCTGCCAAGACGGTCAAAATTTCCGCCCCACCCGACCCTTCATACTCGACCCGGAAACCCACCTCTCTGTTTCCCCTCTTAACGACTACCTCTTCTTCAACTGCAGCGAGGACCACGTAATGATCGCGCCCAAGCCGGTGTTCTGCGGGCGGTTCCCGGACCGGTGCGACGCGTCGTGTGACAGTGCGAGTTACTTGTGCACGCACGTGCCGGAGTGTGCGACGGCGCTGGGGGCAAGTTCTTGCTGCTCGTATCATCCGAAGGCCATGGATTCTTTGAAGCTGATGCTCAAATACTGCGCTAGCTATACTAGCGTGTATTGGAGGAGCGTTGGAGATGGGGATAATAATGATCAAGTTGCGGAGTACGGGATTCGGATTGATTTTGATTTTCTTGTAACAACTACTTGTCTTCGTTGCCAAGATGTTTTGAAGGGCGGTGGATCGTGTGGATTTCATGTTGAAACGTTGCAGTTCTTGTGCATTTGTGATGATAATAATAATGTCACTACTTATTGTCAAGATATGATCTTTACCAAATACGTCCTTAGAGAACTATTTGGTGTGTTTTTTCTTGGAAATCGAAGCATGTGGAATGTTAGCAATAAGCACCGAATAATTGCAGGGACAGTGAGTGCGGTATCAGCAGCTGGGGCATTGGGAATTGCAGCAACTATCTTGTTGTTGAAGAAACTTAAGAAGGCCAAAGCACCCGTCACATGTGGCGTTCAAACTAATGAGAACAGGCTTTTTTGATGACCATATTCAAACACACAGACACTTCTTCCCTTTCCCTACTTTCCTCTTTAATTATTTGCCTTTGCTTTCTTTCTCTAGTACTCAATAGATTCTTCTTTAATTTCAGCTCACACCCCCCACCATTTTTGCTACTTATTAATTCTAATCTTCCAACTCACATTTCCATCCGTCCATGTCGTGTCAAACTAAAAAACACTCATCTTCAATACTATATTTTCAGTTTAAG ATGGCTTTATTCTCATATTCCCTCTCCCCTAGTATTGTTCTAATTATGTCACAAATCCTAGCATCATTCCTGTGTGTGAAATCAACATGCCGAACCTCCTGCGGCAACATTCCGATCCATTATCCTTTCGGCATAGACGACGGCTGCGGCAGCCTCTATTACCGGAACCTCCTTTTCTGCTCAAATTCCGATAAATTAGAGCTCCGAACACCCACCGGAACATACCCTGTATCCGCCATTAGCTACTCCGATCCCTATATCCTAATCTCCGACCCGGACATGTGGGCCTGCCAAGACGGTCAAAATTTCCGCCCCACCCGACCCTTCATACTCGACCCGGAAACCCACCTCTCTGTTTCCCCTCTTAACGACTACCTCTTCTTCAACTGCAGCGAGGACCACGTAATGATCGCGCCCAAGCCGGTGTTCTGCGGGCGGTTCCCGGACCGGTGCGACGCGTCGTGTGACAGTGCGAGTTACTTGTGCACGCACGTGCCGGAGTGTGCGACGGCGCTGGGGGCAAGTTCTTGCTGCTCGTATCATCCGAAGGCCATGGATTCTTTGAAGCTGATGCTCAAATACTGCGCTAGCTATACTAGCGTGTATTGGAGGAGCGTTGGAGATGGGGATAATAATGATCAAGTTGCGGAGTACGGGATTCGGATTGATTTTGATTTTCTTGTAACAACTACTTGTCTTCGTTGCCAAGATGTTTTGAAGGGCGGTGGATCGTGTGGATTTCATGTTGAAACGTTGCAGTTCTTGTGCATTTGTGATGATAATAATAATGTCACTACTTATTGTCAAGATATGATCTTTACCAAATACGTCCTTAGAGAACTATTTGGTGTGTTTTTTCTTGGAAATCGAAGCATGTGGAATGTTAGCAATAAGCACCGAATAATTGCAGGGACAGTGAGTGCGGTATCAGCAGCTGGGGCATTGGGAATTGCAGCAACTATCTTGTTGTTGAAGAAACTTAAGAAGGCCAAAGCACCCGTCACATGTGGCGTTCAAACTAATGAGAACAGGCTTTTTTGA MALFSYSLSPSIVLIMSQILASFLCVKSTCRTSCGNIPIHYPFGIDDGCGSLYYRNLLFCSNSDKLELRTPTGTYPVSAISYSDPYILISDPDMWACQDGQNFRPTRPFILDPETHLSVSPLNDYLFFNCSEDHVMIAPKPVFCGRFPDRCDASCDSASYLCTHVPECATALGASSCCSYHPKAMDSLKLMLKYCASYTSVYWRSVGDGDNNDQVAEYGIRIDFDFLVTTTCLRCQDVLKGGGSCGFHVETLQFLCICDDNNNVTTYCQDMIFTKYVLRELFGVFFLGNRSMWNVSNKHRIIAGTVSAVSAAGALGIAATILLLKKLKKAKAPVTCGVQTNENRLF Homology
BLAST of ClCG01G021760 vs. NCBI nr
Match: XP_038883332.1 (uncharacterized protein LOC120074316 isoform X1 [Benincasa hispida]) HSP 1 Score: 631.3 bits (1627), Expect = 4.8e-177 Identity = 305/346 (88.15%), Postives = 314/346 (90.75%), Query Frame = 0
BLAST of ClCG01G021760 vs. NCBI nr
Match: XP_038883333.1 (uncharacterized protein LOC120074316 isoform X2 [Benincasa hispida]) HSP 1 Score: 622.1 bits (1603), Expect = 2.9e-174 Identity = 303/346 (87.57%), Postives = 312/346 (90.17%), Query Frame = 0
BLAST of ClCG01G021760 vs. NCBI nr
Match: XP_004134776.1 (uncharacterized protein LOC101222449 [Cucumis sativus] >KGN49088.1 hypothetical protein Csa_003564 [Cucumis sativus]) HSP 1 Score: 591.7 bits (1524), Expect = 4.2e-165 Identity = 287/347 (82.71%), Postives = 306/347 (88.18%), Query Frame = 0
BLAST of ClCG01G021760 vs. NCBI nr
Match: XP_008440028.1 (PREDICTED: uncharacterized protein LOC103484627 isoform X1 [Cucumis melo] >TYK13027.1 uncharacterized protein E5676_scaffold255G006280 [Cucumis melo var. makuwa]) HSP 1 Score: 590.5 bits (1521), Expect = 9.4e-165 Identity = 287/347 (82.71%), Postives = 305/347 (87.90%), Query Frame = 0
BLAST of ClCG01G021760 vs. NCBI nr
Match: XP_008440029.1 (PREDICTED: uncharacterized protein LOC103484627 isoform X2 [Cucumis melo]) HSP 1 Score: 564.7 bits (1454), Expect = 5.5e-157 Identity = 276/347 (79.54%), Postives = 292/347 (84.15%), Query Frame = 0
BLAST of ClCG01G021760 vs. ExPASy TrEMBL
Match: A0A0A0KHS5 (GUB_WAK_bind domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G513520 PE=4 SV=1) HSP 1 Score: 591.7 bits (1524), Expect = 2.0e-165 Identity = 287/347 (82.71%), Postives = 306/347 (88.18%), Query Frame = 0
BLAST of ClCG01G021760 vs. ExPASy TrEMBL
Match: A0A5D3CM55 (GUB_WAK_bind domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006280 PE=4 SV=1) HSP 1 Score: 590.5 bits (1521), Expect = 4.6e-165 Identity = 287/347 (82.71%), Postives = 305/347 (87.90%), Query Frame = 0
BLAST of ClCG01G021760 vs. ExPASy TrEMBL
Match: A0A1S3B0S2 (uncharacterized protein LOC103484627 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484627 PE=4 SV=1) HSP 1 Score: 590.5 bits (1521), Expect = 4.6e-165 Identity = 287/347 (82.71%), Postives = 305/347 (87.90%), Query Frame = 0
BLAST of ClCG01G021760 vs. ExPASy TrEMBL
Match: A0A1S3B0W4 (uncharacterized protein LOC103484627 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484627 PE=4 SV=1) HSP 1 Score: 564.7 bits (1454), Expect = 2.7e-157 Identity = 276/347 (79.54%), Postives = 292/347 (84.15%), Query Frame = 0
BLAST of ClCG01G021760 vs. ExPASy TrEMBL
Match: A0A6J1KT12 (uncharacterized protein LOC111496970 OS=Cucurbita maxima OX=3661 GN=LOC111496970 PE=4 SV=1) HSP 1 Score: 536.2 bits (1380), Expect = 1.0e-148 Identity = 262/338 (77.51%), Postives = 289/338 (85.50%), Query Frame = 0
BLAST of ClCG01G021760 vs. TAIR 10
Match: AT1G11915.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 394.8 bits (1013), Expect = 7.1e-110 Identity = 194/349 (55.59%), Postives = 247/349 (70.77%), Query Frame = 0
BLAST of ClCG01G021760 vs. TAIR 10
Match: AT3G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 122.9 bits (307), Expect = 5.2e-28 Identity = 87/254 (34.25%), Postives = 116/254 (45.67%), Query Frame = 0
BLAST of ClCG01G021760 vs. TAIR 10
Match: AT5G50290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 300 Blast hits to 300 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-21 Identity = 83/290 (28.62%), Postives = 129/290 (44.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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