ClCG01G021330 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G021330
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	TPD1 protein homolog 1-like
Location	CG_Chr01: 35191549 .. 35192196 (+)
RNA-Seq Expression	ClCG01G021330
Synteny	ClCG01G021330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGTGGTGCTTTTCACAGATTCTGCCTCTGTTTTTTCCTTACATGCTTTCTTGGTAATGGTAACTCTTTTTTTCTTTGATCTATATAATCTATTCTACTGCATCTTCTTGCCCATTTCATTTAGATTTATACCCACCATTTTCAGAATTCAAGTTGGTTCATTTGAGAGTTGTTCGGGCAGCTGCAAGAGAAAGAAGAAATGGGATTTCTGGGATGTCGCTTCAATCTTCTAATAGTGGTAAGAAACTCAATTCTTACTATGAAAATGTTGTTCTTTACTTATCCACGATGAATCTCATTCTAAACAGGTAAAGAGATGAATCGCATTGGTTCGGAATGTTCAAAAGATGATATCATTATATTTCAAGGCCAAAAAACTCCACTTCCGGATGGGATTCCAACATACATAGTTCAGATCTTGAATTCATGTGCTTCGGACTGCAGCATCTCCAACATTCACGTGAAATGTGGGTGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTCCGGCGAGTCAGTTATGACGACTGCCTTGTCAACGATGGCCAGGCTCTTGGTCCTGGCCAAACTCTGTCTTTCCAATATGCTAACACTTTCCCTTACCCTCTTTCTGTATCTTTTGTAATTTGTTCTTCTTAA

mRNA sequence

ATGAAAGGTGGTGCTTTTCACAGATTCTGCCTCTGTTTTTTCCTTACATGCTTTCTTGATTTATACCCACCATTTTCAGAATTCAAGTTGGTTCATTTGAGAGTTGTTCGGGCAGCTGCAAGAGAAAGAAGAAATGGGATTTCTGGGATGTCGCTTCAATCTTCTAATAGTGGTAAAGAGATGAATCGCATTGGTTCGGAATGTTCAAAAGATGATATCATTATATTTCAAGGCCAAAAAACTCCACTTCCGGATGGGATTCCAACATACATAGTTCAGATCTTGAATTCATGTGCTTCGGACTGCAGCATCTCCAACATTCACGTGAAATGTGGGTGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTCCGGCGAGTCAGTTATGACGACTGCCTTGTCAACGATGGCCAGGCTCTTGGTCCTGGCCAAACTCTGTCTTTCCAATATGCTAACACTTTCCCTTACCCTCTTTCTGTATCTTTTGTAATTTGTTCTTCTTAA

Coding sequence (CDS)

ATGAAAGGTGGTGCTTTTCACAGATTCTGCCTCTGTTTTTTCCTTACATGCTTTCTTGATTTATACCCACCATTTTCAGAATTCAAGTTGGTTCATTTGAGAGTTGTTCGGGCAGCTGCAAGAGAAAGAAGAAATGGGATTTCTGGGATGTCGCTTCAATCTTCTAATAGTGGTAAAGAGATGAATCGCATTGGTTCGGAATGTTCAAAAGATGATATCATTATATTTCAAGGCCAAAAAACTCCACTTCCGGATGGGATTCCAACATACATAGTTCAGATCTTGAATTCATGTGCTTCGGACTGCAGCATCTCCAACATTCACGTGAAATGTGGGTGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTCCGGCGAGTCAGTTATGACGACTGCCTTGTCAACGATGGCCAGGCTCTTGGTCCTGGCCAAACTCTGTCTTTCCAATATGCTAACACTTTCCCTTACCCTCTTTCTGTATCTTTTGTAATTTGTTCTTCTTAA

Protein sequence

MKGGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS

Homology

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BLAST of ClCG01G021330 vs. NCBI nr
Match: XP_038880861.1 (TPD1 protein homolog 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 303.1 bits (775), Expect = 1.5e-78
Identity = 149/168 (88.69%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 1   MKGGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKE 60
           MKGGAFHRF LCF L CFL       EFKLVHLRVV+AAARE+RNGISGMSLQSSNSGKE
Sbjct: 1   MKGGAFHRFSLCFLLACFL-------EFKLVHLRVVQAAAREKRNGISGMSLQSSNSGKE 60

Query: 61  MNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLV 120
           MNRIGSECSKDD+IIFQGQ TPLPDGIPTYIVQILNSCASDCSISNIH+KCGWFSSARLV
Sbjct: 61  MNRIGSECSKDDVIIFQGQTTPLPDGIPTYIVQILNSCASDCSISNIHMKCGWFSSARLV 120

Query: 121 NPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS 169
           NPRIFRRVSYDDCLV++GQALGPGQTLSFQYANTFPYPLSVS V CSS
Sbjct: 121 NPRIFRRVSYDDCLVDNGQALGPGQTLSFQYANTFPYPLSVSSVTCSS 161

[Close]

BLAST of ClCG01G021330 vs. NCBI nr
Match: XP_008440085.1 (PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 286.6 bits (732), Expect = 1.4e-73
Identity = 141/165 (85.45%), Postives = 147/165 (89.09%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMN 62
           GGAFHRFCLCF L  FL      +EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMN
Sbjct: 4   GGAFHRFCLCFLLAIFLG-----NEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMN 63

Query: 63  RIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 122
           RIGSECSK DIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP
Sbjct: 64  RIGSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 123

Query: 123 RIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS 168
           RIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Sbjct: 124 RIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 163

[Close]

BLAST of ClCG01G021330 vs. NCBI nr
Match: TYK12989.1 (TPD1 protein-like protein 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 286.2 bits (731), Expect = 1.8e-73
Identity = 141/165 (85.45%), Postives = 147/165 (89.09%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMN 62
           GGAFHRFCLCF L  FL       EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMN
Sbjct: 4   GGAFHRFCLCFLLAIFL-------EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMN 63

Query: 63  RIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 122
           RIGSECSK+DIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP
Sbjct: 64  RIGSECSKEDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 123

Query: 123 RIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS 168
           RIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Sbjct: 124 RIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 161

[Close]

BLAST of ClCG01G021330 vs. NCBI nr
Match: XP_004134986.1 (TPD1 protein homolog 1 isoform X2 [Cucumis sativus] >KGN49042.1 hypothetical protein Csa_004146 [Cucumis sativus])

HSP 1 Score: 285.4 bits (729), Expect = 3.1e-73
Identity = 141/166 (84.94%), Postives = 148/166 (89.16%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMN 62
           GGAFHRFCL F LT FL      +EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMN
Sbjct: 4   GGAFHRFCLWFLLTIFLG-----NEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMN 63

Query: 63  RIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 122
           RIGS C+KDDIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP
Sbjct: 64  RIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 123

Query: 123 RIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS 169
           RIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CSS
Sbjct: 124 RIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSS 164

[Close]

BLAST of ClCG01G021330 vs. NCBI nr
Match: XP_008440086.1 (PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 4.1e-73
Identity = 141/165 (85.45%), Postives = 146/165 (88.48%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMN 62
           GGAFHRFCLCF L  FL       EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMN
Sbjct: 4   GGAFHRFCLCFLLAIFL-------EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMN 63

Query: 63  RIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 122
           RIGSECSK DIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP
Sbjct: 64  RIGSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 123

Query: 123 RIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS 168
           RIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Sbjct: 124 RIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 161

[Close]

BLAST of ClCG01G021330 vs. ExPASy Swiss-Prot
Match: Q1G3T1 (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-45
Identity = 82/125 (65.60%), Postives = 97/125 (77.60%), Query Frame = 0


Query: 42  ERRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASD 101
           E R  +S   L S + G   NRIG +CSKDDI++FQG   PLP G+P+Y V+I NSC SD
Sbjct: 54  ENRTALSRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSD 113

Query: 102 CSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSV 161
           C+I+ IHV CGWFSS RLVNPR+FRR+ YDDCLVNDGQ LGPGQ+LSFQYAN+F YPLSV
Sbjct: 114 CNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSV 173

Query: 162 SFVIC 167
           + V C
Sbjct: 174 ASVSC 178

[Close]

BLAST of ClCG01G021330 vs. ExPASy Swiss-Prot
Match: Q6TLJ2 (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.1e-35
Identity = 69/123 (56.10%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 50  MSLQSSNSGK-----EMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSI 109
           M L S  +GK     E  RIG +C   DI++ Q    P+P+GIP Y+V+I N C S C I
Sbjct: 54  MLLLSPGTGKTERSVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCII 113

Query: 110 SNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFV 168
           S IH+ CGWFSSA+L+NPR+F+R+ YDDCLVN+G+ L  G TLSF YANTFPY LSV+FV
Sbjct: 114 SRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFV 173

[Close]

BLAST of ClCG01G021330 vs. ExPASy Swiss-Prot
Match: Q2QR54 (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-31
Identity = 62/127 (48.82%), Postives = 84/127 (66.14%), Query Frame = 0


Query: 47  ISGMSLQSSNSGKEMNRIGSECS-KDDIIIFQGQKTPLPDGIPTYIVQILNSCA------ 106
           +SG        G    R+   C+  DDI I+QG+ TPLP G+P Y V ++N CA      
Sbjct: 93  VSGSGGGGGGDGVRTRRVDDGCAGADDIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGGD 152

Query: 107 SDCSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPL 166
            +C+I+ IHV+CGWFSS  LV+PR+FRR+ +DDCL+NDG+ L  G+T+SF+Y N+FPY L
Sbjct: 153 EECAIAGIHVRCGWFSSVSLVDPRVFRRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKL 212

[Close]

BLAST of ClCG01G021330 vs. ExPASy Swiss-Prot
Match: Q8S6P9 (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-24
Identity = 51/115 (44.35%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 54  SSNSGKE-MNRIGSE-CSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKC 113
           S N G+  M R+  + CS+ +++++Q     LP GIPTY V+I+N C + C++ ++H+ C
Sbjct: 55  SPNGGRHWMQRMQPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVCTA-CTVYDVHISC 114

Query: 114 GWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVIC 167
           G F+SA LV+P  F+R+ ++DCLV  G  LGP + +SFQY+N+F YPL+V+ V C
Sbjct: 115 GEFASAELVDPSQFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVAC 168

[Close]

BLAST of ClCG01G021330 vs. ExPASy Swiss-Prot
Match: A8MS78 (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 92  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYD--DCLVNDGQALGPGQTLSF 151
           V+++N C   C I N+ +KC  F  + LV+P   R +S    +C+VNDG  L P QTLSF
Sbjct: 50  VEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSF 109

Query: 152 QYANTFPY---PLSVSF 164
            Y+NT  +   PLS SF
Sbjct: 110 NYSNTHQFALRPLSWSF 124

[Close]

BLAST of ClCG01G021330 vs. ExPASy TrEMBL
Match: A0A1S3AZV4 (TPD1 protein homolog 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484668 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.8e-74
Identity = 141/165 (85.45%), Postives = 147/165 (89.09%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMN 62
           GGAFHRFCLCF L  FL      +EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMN
Sbjct: 4   GGAFHRFCLCFLLAIFLG-----NEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMN 63

Query: 63  RIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 122
           RIGSECSK DIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP
Sbjct: 64  RIGSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 123

Query: 123 RIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS 168
           RIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Sbjct: 124 RIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 163

[Close]

BLAST of ClCG01G021330 vs. ExPASy TrEMBL
Match: A0A5D3CRM1 (TPD1 protein-like protein 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005860 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 8.9e-74
Identity = 141/165 (85.45%), Postives = 147/165 (89.09%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMN 62
           GGAFHRFCLCF L  FL       EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMN
Sbjct: 4   GGAFHRFCLCFLLAIFL-------EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMN 63

Query: 63  RIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 122
           RIGSECSK+DIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP
Sbjct: 64  RIGSECSKEDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 123

Query: 123 RIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS 168
           RIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Sbjct: 124 RIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 161

[Close]

BLAST of ClCG01G021330 vs. ExPASy TrEMBL
Match: A0A0A0KL27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511090 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.5e-73
Identity = 141/166 (84.94%), Postives = 148/166 (89.16%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMN 62
           GGAFHRFCL F LT FL      +EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMN
Sbjct: 4   GGAFHRFCLWFLLTIFLG-----NEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMN 63

Query: 63  RIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 122
           RIGS C+KDDIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP
Sbjct: 64  RIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 123

Query: 123 RIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS 169
           RIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CSS
Sbjct: 124 RIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSS 164

[Close]

BLAST of ClCG01G021330 vs. ExPASy TrEMBL
Match: A0A1S3B0B6 (TPD1 protein homolog 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484668 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.0e-73
Identity = 141/165 (85.45%), Postives = 146/165 (88.48%), Query Frame = 0


Query: 3   GGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKEMN 62
           GGAFHRFCLCF L  FL       EFKLVHLRV++AAARE RNGIS MSLQSSNSGKEMN
Sbjct: 4   GGAFHRFCLCFLLAIFL-------EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMN 63

Query: 63  RIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 122
           RIGSECSK DIIIFQG  TPLP GIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP
Sbjct: 64  RIGSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNP 123

Query: 123 RIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICS 168
           RIF+RVSYDDCLVNDG+ALGPG+TLSFQYANTFPYPLSVS   CS
Sbjct: 124 RIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 161

[Close]

BLAST of ClCG01G021330 vs. ExPASy TrEMBL
Match: A0A6J1ITT0 (TPD1 protein homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478358 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 8.4e-64
Identity = 125/168 (74.40%), Postives = 140/168 (83.33%), Query Frame = 0


Query: 1   MKGGAFHRFCLCFFLTCFLDLYPPFSEFKLVHLRVVRAAARERRNGISGMSLQSSNSGKE 60
           MK GAF RF LCF L         F  FKLV L VV+AAARE+ +GIS MSLQSS +G+ 
Sbjct: 1   MKVGAFPRFFLCFSL---------FLAFKLVRLSVVQAAAREKNSGISWMSLQSSKTGRG 60

Query: 61  MNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLV 120
           MNR+GSECSKDD+++FQGQ  PLPDGIP++IVQILNSC+S CSISNIH+KCGWFSSARLV
Sbjct: 61  MNRVGSECSKDDVVVFQGQTAPLPDGIPSFIVQILNSCSSGCSISNIHMKCGWFSSARLV 120

Query: 121 NPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFVICSS 169
           NPRIFRRV YDDCL+NDG+ALGPGQTLSFQYANTF YPLSVS V CSS
Sbjct: 121 NPRIFRRVKYDDCLINDGKALGPGQTLSFQYANTFLYPLSVSSVTCSS 159

[Close]

BLAST of ClCG01G021330 vs. TAIR 10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 183.7 bits (465), Expect = 1.2e-46
Identity = 82/125 (65.60%), Postives = 97/125 (77.60%), Query Frame = 0


Query: 42  ERRNGISGMSLQSSNSGKEMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASD 101
           E R  +S   L S + G   NRIG +CSKDDI++FQG   PLP G+P+Y V+I NSC SD
Sbjct: 54  ENRTALSRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSD 113

Query: 102 CSISNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSV 161
           C+I+ IHV CGWFSS RLVNPR+FRR+ YDDCLVNDGQ LGPGQ+LSFQYAN+F YPLSV
Sbjct: 114 CNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSV 173

Query: 162 SFVIC 167
           + V C
Sbjct: 174 ASVSC 178

[Close]

BLAST of ClCG01G021330 vs. TAIR 10
Match: AT4G24972.1 (tapetum determinant 1 )

HSP 1 Score: 150.2 bits (378), Expect = 1.5e-36
Identity = 69/123 (56.10%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 50  MSLQSSNSGK-----EMNRIGSECSKDDIIIFQGQKTPLPDGIPTYIVQILNSCASDCSI 109
           M L S  +GK     E  RIG +C   DI++ Q    P+P+GIP Y+V+I N C S C I
Sbjct: 54  MLLLSPGTGKTERSVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCII 113

Query: 110 SNIHVKCGWFSSARLVNPRIFRRVSYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVSFV 168
           S IH+ CGWFSSA+L+NPR+F+R+ YDDCLVN+G+ L  G TLSF YANTFPY LSV+FV
Sbjct: 114 SRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFV 173

[Close]

BLAST of ClCG01G021330 vs. TAIR 10
Match: AT1G05835.1 (PHD finger protein )

HSP 1 Score: 57.8 bits (138), Expect = 9.9e-09
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 92  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFRRVSYD--DCLVNDGQALGPGQTLSF 151
           V+++N C   C I N+ +KC  F  + LV+P   R +S    +C+VNDG  L P QTLSF
Sbjct: 50  VEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSF 109

Query: 152 QYANTFPY---PLSVSF 164
            Y+NT  +   PLS SF
Sbjct: 110 NYSNTHQFALRPLSWSF 124

The following BLAST results are available for this feature:

BLAST of ClCG01G021330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880861.1	1.5e-78	88.69	TPD1 protein homolog 1-like isoform X2 [Benincasa hispida]	[more]
XP_008440085.1	1.4e-73	85.45	PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis melo]	[more]
TYK12989.1	1.8e-73	85.45	TPD1 protein-like protein 1-like isoform X2 [Cucumis melo var. makuwa]	[more]
XP_004134986.1	3.1e-73	84.94	TPD1 protein homolog 1 isoform X2 [Cucumis sativus] >KGN49042.1 hypothetical pro...	[more]
XP_008440086.1	4.1e-73	85.45	PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis melo]	[more]

BLAST of ClCG01G021330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3T1	1.7e-45	65.60	TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1	[more]
Q6TLJ2	2.1e-35	56.10	Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1	[more]
Q2QR54	1.4e-31	48.82	TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 S...	[more]
Q8S6P9	1.6e-24	44.35	TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 S...	[more]
A8MS78	1.4e-07	44.16	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P...	[more]

BLAST of ClCG01G021330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZV4	6.8e-74	85.45	TPD1 protein homolog 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484668 P...	[more]
A0A5D3CRM1	8.9e-74	85.45	TPD1 protein-like protein 1-like isoform X2 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0KL27	1.5e-73	84.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511090 PE=4 SV=1	[more]
A0A1S3B0B6	2.0e-73	85.45	TPD1 protein homolog 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484668 P...	[more]
A0A6J1ITT0	8.4e-64	74.40	TPD1 protein homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478358 PE=4 SV=...	[more]

BLAST of ClCG01G021330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32583.1	1.2e-46	65.60	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G24972.1	1.5e-36	56.10	tapetum determinant 1	[more]
AT1G05835.1	9.9e-09	44.16	PHD finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33184:SF67	PROTEIN TAPETUM DETERMINANT 1	coord: 57..167
IPR040361	Tapetum determinant 1	PANTHER	PTHR33184	PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED	coord: 57..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G021330.1	ClCG01G021330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001709	cell fate determination
biological_process	GO:0009408	response to heat