ClCG01G020280 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGAAAAAACAAGACGAGTCCACCGAAAGACGAAGGCGCCGGCCAATCTCTGCCTCCGAAAGCCAAGAGGCGACGCCACGAAGAACAACAAGGCCGCGGCGGCCATGACTCTGTTTGAACGCCTCCGCGAGGCTGTTTTTCGTTTTATAATGCTATGTGCTCTCTCAAAGGCCACAAATCATCATCCCGCCGGCGGAGCCGCCTTCCAGGACGACGTCGTCGTTAGGCGGCGACACGCATACCCAAACGTCGACCACCACCACAGCGAAGCCGTCGCCGATTGCATCGAATTCATCAAGATGAAGGCGTATTCCGACGACGAAATAATTCTTGACCGTGGATCGGTGGACGTCGATGATGATATGGCGGTGTCGGTGCCGGTGCCGGTCAGGTAA ATGGCCGAAAAAACAAGACGAGTCCACCGAAAGACGAAGGCGCCGGCCAATCTCTGCCTCCGAAAGCCAAGAGGCGACGCCACGAAGAACAACAAGGCCGCGGCGGCCATGACTCTGTTTGAACGCCTCCGCGAGGCTGTTTTTCGTTTTATAATGCTATGTGCTCTCTCAAAGGCCACAAATCATCATCCCGCCGGCGGAGCCGCCTTCCAGGACGACGTCGTCGTTAGGCGGCGACACGCATACCCAAACGTCGACCACCACCACAGCGAAGCCGTCGCCGATTGCATCGAATTCATCAAGATGAAGGCGTATTCCGACGACGAAATAATTCTTGACCGTGGATCGGTGGACGTCGATGATGATATGGCGGTGTCGGTGCCGGTGCCGGTCAGGTAA ATGGCCGAAAAAACAAGACGAGTCCACCGAAAGACGAAGGCGCCGGCCAATCTCTGCCTCCGAAAGCCAAGAGGCGACGCCACGAAGAACAACAAGGCCGCGGCGGCCATGACTCTGTTTGAACGCCTCCGCGAGGCTGTTTTTCGTTTTATAATGCTATGTGCTCTCTCAAAGGCCACAAATCATCATCCCGCCGGCGGAGCCGCCTTCCAGGACGACGTCGTCGTTAGGCGGCGACACGCATACCCAAACGTCGACCACCACCACAGCGAAGCCGTCGCCGATTGCATCGAATTCATCAAGATGAAGGCGTATTCCGACGACGAAATAATTCTTGACCGTGGATCGGTGGACGTCGATGATGATATGGCGGTGTCGGTGCCGGTGCCGGTCAGGTAA MAEKTRRVHRKTKAPANLCLRKPRGDATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRGSVDVDDDMAVSVPVPVR Homology
BLAST of ClCG01G020280 vs. NCBI nr
Match: KGN49339.2 (hypothetical protein Csa_003207 [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 9.8e-54 Identity = 114/134 (85.07%), Postives = 118/134 (88.06%), Query Frame = 0
BLAST of ClCG01G020280 vs. NCBI nr
Match: KAA0025678.1 (Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa] >TYK12553.1 Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 192.6 bits (488), Expect = 2.2e-45 Identity = 100/117 (85.47%), Postives = 104/117 (88.89%), Query Frame = 0
BLAST of ClCG01G020280 vs. NCBI nr
Match: KAG6603914.1 (hypothetical protein SDJN03_04523, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 181.8 bits (460), Expect = 3.8e-42 Identity = 102/132 (77.27%), Postives = 106/132 (80.30%), Query Frame = 0
BLAST of ClCG01G020280 vs. NCBI nr
Match: KAG2694204.1 (hypothetical protein I3760_08G130700 [Carya illinoinensis]) HSP 1 Score: 88.6 bits (218), Expect = 4.4e-14 Identity = 59/110 (53.64%), Postives = 69/110 (62.73%), Query Frame = 0
BLAST of ClCG01G020280 vs. NCBI nr
Match: KAB1201821.1 (hypothetical protein CJ030_MR8G020135 [Morella rubra]) HSP 1 Score: 87.4 bits (215), Expect = 9.9e-14 Identity = 61/131 (46.56%), Postives = 75/131 (57.25%), Query Frame = 0
BLAST of ClCG01G020280 vs. ExPASy TrEMBL
Match: A0A0A0KGN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505880 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54 Identity = 114/134 (85.07%), Postives = 118/134 (88.06%), Query Frame = 0
BLAST of ClCG01G020280 vs. ExPASy TrEMBL
Match: A0A5A7SHP0 (Transducin/WD40 repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001350 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.1e-45 Identity = 100/117 (85.47%), Postives = 104/117 (88.89%), Query Frame = 0
BLAST of ClCG01G020280 vs. ExPASy TrEMBL
Match: A0A6A1UNG7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G020135 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 4.8e-14 Identity = 61/131 (46.56%), Postives = 75/131 (57.25%), Query Frame = 0
BLAST of ClCG01G020280 vs. ExPASy TrEMBL
Match: A0A5C7HUV3 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_015142 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 4.8e-14 Identity = 65/140 (46.43%), Postives = 73/140 (52.14%), Query Frame = 0
BLAST of ClCG01G020280 vs. ExPASy TrEMBL
Match: A0A1R3IPX3 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_21914 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 3.1e-13 Identity = 54/116 (46.55%), Postives = 68/116 (58.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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