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ClCG01G019060 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTCCATAGGAGCTAGCTGCGCTCGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTACAGAGGATGGAGCAGGAGAGATCCGGCAGGAGAGAAGACTCCGTCAAACCTCCTAAAACTGCCCATCACGGCGGCGCTGTCACCGGCAAATCCAGTAAAAAAGTCTATCCGGGCACCATATTTGGGGTTCCGGCGACCTCTAATTCTTGA ATGTCCTCCATAGGAGCTAGCTGCGCTCGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTACAGAGGATGGAGCAGGAGAGATCCGGCAGGAGAGAAGACTCCGTCAAACCTCCTAAAACTGCCCATCACGGCGGCGCTGTCACCGGCAAATCCAGTAAAAAAGTCTATCCGGGCACCATATTTGGGGTTCCGGCGACCTCTAATTCTTGA ATGTCCTCCATAGGAGCTAGCTGCGCTCGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTACAGAGGATGGAGCAGGAGAGATCCGGCAGGAGAGAAGACTCCGTCAAACCTCCTAAAACTGCCCATCACGGCGGCGCTGTCACCGGCAAATCCAGTAAAAAAGTCTATCCGGGCACCATATTTGGGGTTCCGGCGACCTCTAATTCTTGA MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHGGAVTGKSSKKVYPGTIFGVPATSNS Homology
BLAST of ClCG01G019060 vs. NCBI nr
Match: KAA0036273.1 (hypothetical protein E6C27_scaffold18G00720 [Cucumis melo var. makuwa] >TYK12667.1 hypothetical protein E5676_scaffold255G002550 [Cucumis melo var. makuwa]) HSP 1 Score: 118.6 bits (296), Expect = 2.2e-23 Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of ClCG01G019060 vs. NCBI nr
Match: KGN48780.1 (hypothetical protein Csa_002943 [Cucumis sativus]) HSP 1 Score: 117.5 bits (293), Expect = 4.8e-23 Identity = 61/72 (84.72%), Postives = 67/72 (93.06%), Query Frame = 0
BLAST of ClCG01G019060 vs. NCBI nr
Match: KAG6594855.1 (hypothetical protein SDJN03_11408, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 105.1 bits (261), Expect = 2.5e-19 Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of ClCG01G019060 vs. NCBI nr
Match: KAG6604014.1 (hypothetical protein SDJN03_04623, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100.9 bits (250), Expect = 4.6e-18 Identity = 51/73 (69.86%), Postives = 62/73 (84.93%), Query Frame = 0
BLAST of ClCG01G019060 vs. NCBI nr
Match: KAF3969578.1 (hypothetical protein CMV_006642 [Castanea mollissima]) HSP 1 Score: 53.5 bits (127), Expect = 8.5e-04 Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of ClCG01G019060 vs. ExPASy TrEMBL
Match: A0A5A7T065 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002550 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.0e-23 Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of ClCG01G019060 vs. ExPASy TrEMBL
Match: A0A0A0KGB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500720 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.3e-23 Identity = 61/72 (84.72%), Postives = 67/72 (93.06%), Query Frame = 0
BLAST of ClCG01G019060 vs. ExPASy TrEMBL
Match: A0A2N9EUS9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6201 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 6.3e-05 Identity = 33/60 (55.00%), Postives = 45/60 (75.00%), Query Frame = 0
BLAST of ClCG01G019060 vs. ExPASy TrEMBL
Match: A0A2P5CW36 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_117820 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.4e-04 Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 0
BLAST of ClCG01G019060 vs. ExPASy TrEMBL
Match: A0A2P5BZF9 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_303210 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.4e-04 Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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