ClCG01G018970 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G018970
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	trafficking protein particle complex subunit 12
Location	CG_Chr01: 33414596 .. 33417503 (-)
RNA-Seq Expression	ClCG01G018970
Synteny	ClCG01G018970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACTGAGTCACCGTCACCTGACTCTCACTCTAACAGAACTTCCGATCCCGAAACCCTAACAACAGGAATCGAGGAATTGACAATTTCCTCGGACCCTTTAACCAGTCAGTTCAGATCCCTCAACGATCTTGCCCCCGAGCTTTCCTCTCTTCAAGATCTCGCCACTCGCGGCTCATGGCGTTCAATTTTGGACAAGGTTGCAAGGGCACGAGCTCTCTCCCTGCTCCAGAAGCCCCATGACCACCTCACTTACCTCTCCTACAATGTCCTTGCCCTCGTCAAAATGCGCCGTTTTGCCGAAGCCTTGGCGGAACTTGATTCTCTCGAAGATCTCGATAGCTCTCAATACAGGTACGAATCTTATCCAAGCGTCTACCCTAATCGGACCGGCTCGATGGTCCCCTTTTCACTTCGGTGGCTGCACGCCCTAATCCCTATCAAAATGGGTGAGCGTCAAGATGGGTTGGACCGGTTCTACGAACTTCTGGATTTTGTACAGTCAAAAGTGAAGGATAAAGAGTTGAAAAATCTCGATGCCTCTGTGAAATTGTGGAAGAAAAGGGAAGTGTTTGTGATTAATTGTATTATTGGTCATCATTTAAGTAACAAGGAGTTTGGGGTTTGTTTAACTCTGATCAATAATTTGCTCAGTCAGGATTTCTCAGACCCTGCTTTGATTTCGAAACTTGGGTATATACAAATGCACGTTGGTGATATTGAAGGTGCAAAGCGTTCGTTTAATCGGATTGAGGAGATGGTTAAGGAAGGGAAGAGTAGTGGGTCATTGAGCGAGGTAGAGATTAAGAACCTTGTGAATAGGAACAAGGCGTTGGTGTTTTTGGTGGGTAAGGACTATCTATCAGCAGTGAGGGAATATGAGGAGTGTATCGAGAGGGACAATTCGGACGTGGTGGCCATTAACAATAAAGCTCTTTGCTTGATGTATTTGCGGGATTTAGCAGATTCGATTAAAGTGCTTGAAAATGCACTGGAAAGAGTTCCTACTGTGGCTCTTAATGAAACAGTGATCGTGAATCTGTGTAGTATGTATGAATTGGCTTACGTTAATCACTCTGAGATTAAGAGAACGCTCAATAACTGGATTGCCCGTGTTGCTCCTGATGATTTTGATTCTTCGAGTACTCGGATTTAAGGTAGTGAGTATGATTTTGGTGTTTCAATACATTATGCATCTGAGCCCCCACTTTTTTAACCCGTGTGGGTTTTAAGTTTTATCCCTTGTATGAAAATCTATTCATTCGCATGCCTCCTTATTCTTCTGTGTTATATAAGTTGTAGCTTATGAATTGCCTTTTAGAATGGTCTGGTAATTGTTAGTGCCATGAACATGATATATGGATTTGTTGGAATAACGCAGAACTTTGCATCAGTCCCTTTAAACCATATTGCGGGTGATGGTTCTTGTTGTCTAAACTTCAAGGGATTGGACTTGTCTGCATTTCTAATGATTTTATGTCTGCTCTGAGTACCATATAGCTAAATCAAAATTCGATATCCGATTCTATTCAAAAAATGCATTCCAGCCGGTAAAAACCTTCTTTTGTCTTAAAGCTTATCTTATATCTTCATGTTTACTCATCAGAAACCGATTCAACTCCTTGAAGAAATAGTTTTAAAAGGTAAGTGTGTGCATCAAAAACAAAAGCTGGTTGAGCCCCTTTGATGTTTCTCCTTTCCTTCCTGAATTTGCCCCTATGGGTCATTCTTGAACTCTTATTTCGCAACTGGGGTGGGAAAGTTTTAAACTTTTGATGAATTCTTTCTACTCCATTTAAATTATATCAGTTGGGGCATAAAAGGTTCTTTAGTTCTGCTGATGTATAACTAGTTACATTTCACGTAGTCTAAAATTAAATTAGAGGGAGGCTAAGCTTCTATTTCTGACCCCCAAAAACTCTCTCATCCATGTTGAATCTGCATGGCACTTGGAAGTGTTCATTAAAACCAACCAAACCAAATTGAATGACAAAATCAAATCAAAGCGAACTGAAAATTTGGTTTTACGTAAGCATCAGTTTGGTTTAAAATTATAAGGAAATCGAATATTTACAGTTCAGTTTGATATGTATCCAAAACCAAAATTTTCGATTTGATTTGGTTTTACTAGCAAATCAAACCGAAGTATGAACGCCCTAATTGCACTCATTATTTTCATTGATGTTCCATTATAAGTATGCATTTCTTGCTTAATAAAAGTGAGTTTCCTCCCTCTTCATAATTTTTCAAAAACTAAATTTGTTCTGTAATCATCCACTTTTAACCCACTCTCATTGTTTTTCGTCGGGTAATATAGCCGATTGTTTTGATCAATAAAAATTTTCAAACGAGGCAAATTTCTATTAATTACATTCAGTTTTCAAATTTCATAGCACGAGTTTTTAGCTCAAAGGCGAGGGGGAAATATTCATGTATTTTTATTTTAGTCTGTTTCCGTCTTAGACAAAAATTGAGGAAATAATTCTTATCTAACTTCTACAAACTAAATACAAAACTTTTATTCTATCTTTTGGTTGATTAGTTAAGAGTAGAGTAATAAAATATGGAAGGCAATTCAAGAGAGGACAGAATAATTTTTGGTTAGGAAGACCTGGCTTCAAAGGTTCCATCAATATTCCAAAACGATGCTGCATGAACGGTATTTGGTGGCAAAAAGCAATAGGAAAGAGACAACAAAAGTCATTCTTAACGTTTCTTTATGATCAATTTTCCGTTCAATTGGAGCTGGTTTTGCAAAGGACAGCCCCCAGAAGCTAAGGACTTCTTCATCCAAGGACCAAGCTCTTGACTTTAACTTCAAGACAATCAAACCCTCAACATCAAGAATCCTCTCTTTTCTTCACCCATTTATAACCACTCCATTCTCCCAAGTCATTGAAGATTAA

mRNA sequence

ATGGAAACTGAGTCACCGTCACCTGACTCTCACTCTAACAGAACTTCCGATCCCGAAACCCTAACAACAGGAATCGAGGAATTGACAATTTCCTCGGACCCTTTAACCAGTCAGTTCAGATCCCTCAACGATCTTGCCCCCGAGCTTTCCTCTCTTCAAGATCTCGCCACTCGCGGCTCATGGCGTTCAATTTTGGACAAGGTTGCAAGGGCACGAGCTCTCTCCCTGCTCCAGAAGCCCCATGACCACCTCACTTACCTCTCCTACAATGTCCTTGCCCTCGTCAAAATGCGCCGTTTTGCCGAAGCCTTGGCGGAACTTGATTCTCTCGAAGATCTCGATAGCTCTCAATACAGGTACGAATCTTATCCAAGCGTCTACCCTAATCGGACCGGCTCGATGGTCCCCTTTTCACTTCGGTGGCTGCACGCCCTAATCCCTATCAAAATGGGTGAGCGTCAAGATGGGTTGGACCGGTTCTACGAACTTCTGGATTTTGTACAGTCAAAAGTGAAGGATAAAGAGTTGAAAAATCTCGATGCCTCTGTGAAATTGTGGAAGAAAAGGGAAGTGTTTGTGATTAATTGTATTATTGGTCATCATTTAAGTAACAAGGAGTTTGGGGTTTGTTTAACTCTGATCAATAATTTGCTCAGTCAGGATTTCTCAGACCCTGCTTTGATTTCGAAACTTGGGTATATACAAATGCACGTTGGTGATATTGAAGGTGCAAAGCGTTCGTTTAATCGGATTGAGGAGATGGTTAAGGAAGGGAAGAGTAGTGGGTCATTGAGCGAGGTAGAGATTAAGAACCTTGTGAATAGGAACAAGGCGTTGGTGTTTTTGGTGGGTAAGGACTATCTATCAGCAGTGAGGGAATATGAGGAGTGTATCGAGAGGGACAATTCGGACGTGGTGGCCATTAACAATAAAGCTCTTTGCTTGATGTATTTGCGGGATTTAGCAGATTCGATTAAAGTGCTTGAAAATGCACTGGAAAGAGTTCCTACTGTGGCTCTTAATGAAACAGTGATCGTGAATCTGTGTAGTATGTATGAATTGGCTTACGTTAATCACTCTGAGATTAAGAGAACGCTCAATAACTGGATTGCCCGTGTTGCTCCTGATGATTTTGATTCTTCGACACGAGTTTTTAGCTCAAAGGCGAGGGGGAAATATTCATCTGGTTTTGCAAAGGACAGCCCCCAGAAGCTAAGGACTTCTTCATCCAAGGACCAAGCTCTTGACTTTAACTTCAAGACAATCAAACCCTCAACATCAAGAATCCTCTCTTTTCTTCACCCATTTATAACCACTCCATTCTCCCAAGTCATTGAAGATTAA

Coding sequence (CDS)

ATGGAAACTGAGTCACCGTCACCTGACTCTCACTCTAACAGAACTTCCGATCCCGAAACCCTAACAACAGGAATCGAGGAATTGACAATTTCCTCGGACCCTTTAACCAGTCAGTTCAGATCCCTCAACGATCTTGCCCCCGAGCTTTCCTCTCTTCAAGATCTCGCCACTCGCGGCTCATGGCGTTCAATTTTGGACAAGGTTGCAAGGGCACGAGCTCTCTCCCTGCTCCAGAAGCCCCATGACCACCTCACTTACCTCTCCTACAATGTCCTTGCCCTCGTCAAAATGCGCCGTTTTGCCGAAGCCTTGGCGGAACTTGATTCTCTCGAAGATCTCGATAGCTCTCAATACAGGTACGAATCTTATCCAAGCGTCTACCCTAATCGGACCGGCTCGATGGTCCCCTTTTCACTTCGGTGGCTGCACGCCCTAATCCCTATCAAAATGGGTGAGCGTCAAGATGGGTTGGACCGGTTCTACGAACTTCTGGATTTTGTACAGTCAAAAGTGAAGGATAAAGAGTTGAAAAATCTCGATGCCTCTGTGAAATTGTGGAAGAAAAGGGAAGTGTTTGTGATTAATTGTATTATTGGTCATCATTTAAGTAACAAGGAGTTTGGGGTTTGTTTAACTCTGATCAATAATTTGCTCAGTCAGGATTTCTCAGACCCTGCTTTGATTTCGAAACTTGGGTATATACAAATGCACGTTGGTGATATTGAAGGTGCAAAGCGTTCGTTTAATCGGATTGAGGAGATGGTTAAGGAAGGGAAGAGTAGTGGGTCATTGAGCGAGGTAGAGATTAAGAACCTTGTGAATAGGAACAAGGCGTTGGTGTTTTTGGTGGGTAAGGACTATCTATCAGCAGTGAGGGAATATGAGGAGTGTATCGAGAGGGACAATTCGGACGTGGTGGCCATTAACAATAAAGCTCTTTGCTTGATGTATTTGCGGGATTTAGCAGATTCGATTAAAGTGCTTGAAAATGCACTGGAAAGAGTTCCTACTGTGGCTCTTAATGAAACAGTGATCGTGAATCTGTGTAGTATGTATGAATTGGCTTACGTTAATCACTCTGAGATTAAGAGAACGCTCAATAACTGGATTGCCCGTGTTGCTCCTGATGATTTTGATTCTTCGACACGAGTTTTTAGCTCAAAGGCGAGGGGGAAATATTCATCTGGTTTTGCAAAGGACAGCCCCCAGAAGCTAAGGACTTCTTCATCCAAGGACCAAGCTCTTGACTTTAACTTCAAGACAATCAAACCCTCAACATCAAGAATCCTCTCTTTTCTTCACCCATTTATAACCACTCCATTCTCCCAAGTCATTGAAGATTAA

Protein sequence

METESPSPDSHSNRTSDPETLTTGIEELTISSDPLTSQFRSLNDLAPELSSLQDLATRGSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKMRRFAEALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKELKNLDASVKLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSQDFSDPALISKLGYIQMHVGDIEGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERDNSDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTLNNWIARVAPDDFDSSTRVFSSKARGKYSSGFAKDSPQKLRTSSSKDQALDFNFKTIKPSTSRILSFLHPFITTPFSQVIED

Homology

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BLAST of ClCG01G018970 vs. NCBI nr
Match: XP_038882977.1 (trafficking protein particle complex subunit 12 [Benincasa hispida])

HSP 1 Score: 704.9 bits (1818), Expect = 4.4e-199
Identity = 362/382 (94.76%), Postives = 372/382 (97.38%), Query Frame = 0


Query: 1   METESPSPDSHSNRTSDPETLTTGIEELTISSDPLTSQFRSLNDLAPELSSLQDLATRGS 60
           METE PSP+SHS+RTSD ETLT+GIEELTISSDPLTSQF SLNDLA ELSSLQDLA RGS
Sbjct: 1   METEPPSPESHSHRTSDSETLTSGIEELTISSDPLTSQFGSLNDLAHELSSLQDLAARGS 60

Query: 61  WRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKMRRFAEALAELDSLEDLDSSQYRY 120
           WRSILDKVARAR+LSLLQKPHDHL YLSYNVLALVK+RRFAEALAELDSLEDLDSSQYRY
Sbjct: 61  WRSILDKVARARSLSLLQKPHDHLIYLSYNVLALVKLRRFAEALAELDSLEDLDSSQYRY 120

Query: 121 ESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKELKNLD 180
           ESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKE KNLD
Sbjct: 121 ESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKEEKNLD 180

Query: 181 ASVKLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSQDFSDPALISKLGYIQMHVGD 240
            SV LWKKR VFVINCIIGHHLSNKEFGVCLTL+NNLLS+DFSDPALISKLGYIQMHVGD
Sbjct: 181 VSVNLWKKRVVFVINCIIGHHLSNKEFGVCLTLMNNLLSEDFSDPALISKLGYIQMHVGD 240

Query: 241 IEGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300
           IEGAKRSFN+IEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER
Sbjct: 241 IEGAKRSFNQIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300

Query: 301 DNSDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360
           D+SDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS
Sbjct: 301 DDSDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360

Query: 361 EIKRTLNNWIARVAPDDFDSST 383
           EIKRTLNNWIARVAPDDFDSS+
Sbjct: 361 EIKRTLNNWIARVAPDDFDSSS 382

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BLAST of ClCG01G018970 vs. NCBI nr
Match: XP_016899300.1 (PREDICTED: trafficking protein particle complex subunit 12 [Cucumis melo] >KAA0036282.1 trafficking protein particle complex subunit 12 [Cucumis melo var. makuwa] >TYK12676.1 trafficking protein particle complex subunit 12 [Cucumis melo var. makuwa])

HSP 1 Score: 704.9 bits (1818), Expect = 4.4e-199
Identity = 363/384 (94.53%), Postives = 373/384 (97.14%), Query Frame = 0


Query: 1   METE--SPSPDSHSNRTSDPETLTTGIEELTISSDPLTSQFRSLNDLAPELSSLQDLATR 60
           METE  SPSPDSHS+ TSDPETLTTGIE LTISSDPLT+QF SLNDLA +LSSLQDLATR
Sbjct: 1   METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR 60

Query: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKMRRFAEALAELDSLEDLDSSQY 120
           GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVK+RRFAEALAELDSLEDL+SSQY
Sbjct: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120

Query: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKELKN 180
           RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSK+KDKE K 
Sbjct: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK 180

Query: 181 LDASVKLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSQDFSDPALISKLGYIQMHV 240
           LD SV LWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLS+DFSDPALISKLGYIQMH 
Sbjct: 181 LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240

Query: 241 GDIEGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300
           GDIEGAKRSFNRIEE+VKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI
Sbjct: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300

Query: 301 ERDNSDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360
           ERDNSD+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN
Sbjct: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360

Query: 361 HSEIKRTLNNWIARVAPDDFDSST 383
           HSEIKRTLNNWIARVAPDDFDSS+
Sbjct: 361 HSEIKRTLNNWIARVAPDDFDSSS 384

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BLAST of ClCG01G018970 vs. NCBI nr
Match: XP_022962944.1 (trafficking protein particle complex subunit 12 [Cucurbita moschata])

HSP 1 Score: 689.1 bits (1777), Expect = 2.5e-194
Identity = 354/385 (91.95%), Postives = 374/385 (97.14%), Query Frame = 0


Query: 1   METESPSPDSHSNRTSDPETLTTGIEELTISSDPLTSQFRSLNDLAPELSSLQDLATRGS 60
           ME+ESPSPDS ++RTSDPETLT+ IE LTISSDPLTS+F SL+DLA ELSSLQDLATRGS
Sbjct: 1   MESESPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60

Query: 61  WRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKMRRFAEALAELDSLEDLDSSQYRY 120
           WRSILDKVARAR+LSLLQKPHDHLTYLSYNVLALVK+RRFAE LAELDSLEDLDSSQYRY
Sbjct: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120

Query: 121 ESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKELKNLD 180
           E+YPSVYPNRTGSMVPFSLRWLHALIPIKMGERQ+GLDRFYELLDFVQSKVKDK+ KNLD
Sbjct: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180

Query: 181 ASVKLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSQDFSDPALISKLGYIQMHVGD 240
            SV LWKKREVFVINCI+GHHLSNKEFGVCL+LI+NLLS+DFSDPALISKLGYIQMHVGD
Sbjct: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240

Query: 241 IEGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300
           IEGAKRSFN+IE+MVKEGKSS SLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER
Sbjct: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300

Query: 301 DNSDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360
           D++DVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS
Sbjct: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360

Query: 361 EIKRTLNNWIARVAPDDFDSS-TRV 385
           EIKRTLNNWIARVAPDDFDSS TR+
Sbjct: 361 EIKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of ClCG01G018970 vs. NCBI nr
Match: XP_004143481.1 (trafficking protein particle complex subunit 12 [Cucumis sativus] >KGN48770.1 hypothetical protein Csa_004032 [Cucumis sativus])

HSP 1 Score: 688.3 bits (1775), Expect = 4.3e-194
Identity = 355/384 (92.45%), Postives = 367/384 (95.57%), Query Frame = 0


Query: 1   METE--SPSPDSHSNRTSDPETLTTGIEELTISSDPLTSQFRSLNDLAPELSSLQDLATR 60
           METE  SPSPDSHS+ TSDPETLTTG E L ISSDPLT+QF SLNDLA +L SLQDLATR
Sbjct: 1   METESPSPSPDSHSHSTSDPETLTTGFENLAISSDPLTTQFGSLNDLAHDLFSLQDLATR 60

Query: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKMRRFAEALAELDSLEDLDSSQY 120
           GSWRSILDKVARARAL+LLQKPHDHLTYLSYNVLALVK+RRFAEALAELDSLEDL+SSQY
Sbjct: 61  GSWRSILDKVARARALTLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120

Query: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKELKN 180
           RYESYPSVYPNRTGSMVPFSLRWL ALIPIKMGERQ GLDRFYELLDFVQSK+KDKE K 
Sbjct: 121 RYESYPSVYPNRTGSMVPFSLRWLQALIPIKMGERQHGLDRFYELLDFVQSKLKDKEEKK 180

Query: 181 LDASVKLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSQDFSDPALISKLGYIQMHV 240
           LD SV LWKKR VFVINCIIGHHLSNKEFGVCLTLINNLLS+DFSDPALISKLGYIQMH 
Sbjct: 181 LDVSVNLWKKRVVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240

Query: 241 GDIEGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300
           GDIEGAKRSFNRIEE+VKEGKSSGSLSEVE+KNLVNRNKALVFLVGKDYLSAVREYEECI
Sbjct: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEMKNLVNRNKALVFLVGKDYLSAVREYEECI 300

Query: 301 ERDNSDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360
           ERDNSD+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN
Sbjct: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360

Query: 361 HSEIKRTLNNWIARVAPDDFDSST 383
           HSEIKRTLNNWIARVAPDDFDSS+
Sbjct: 361 HSEIKRTLNNWIARVAPDDFDSSS 384

[Close]

BLAST of ClCG01G018970 vs. NCBI nr
Match: KAG7026829.1 (Trafficking protein particle complex subunit 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 686.8 bits (1771), Expect = 1.2e-193
Identity = 353/385 (91.69%), Postives = 373/385 (96.88%), Query Frame = 0


Query: 1   METESPSPDSHSNRTSDPETLTTGIEELTISSDPLTSQFRSLNDLAPELSSLQDLATRGS 60
           ME+E PSPDS ++RTSDPETLT+ IE LTISSDPLTS+F SL+DLA ELSSLQDLATRGS
Sbjct: 1   MESELPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60

Query: 61  WRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKMRRFAEALAELDSLEDLDSSQYRY 120
           WRSILDKVARAR+LSLLQKPHDHLTYLSYNVLALVK+RRFAE LAELDSLEDLDSSQYRY
Sbjct: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120

Query: 121 ESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKELKNLD 180
           E+YPSVYPNRTGSMVPFSLRWLHALIPIKMGERQ+GLDRFYELLDFVQSKVKDK+ KNLD
Sbjct: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180

Query: 181 ASVKLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSQDFSDPALISKLGYIQMHVGD 240
            SV LWKKREVFVINCI+GHHLSNKEFGVCL+LI+NLLS+DFSDPALISKLGYIQMHVGD
Sbjct: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240

Query: 241 IEGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300
           IEGAKRSFN+IE+MVKEGKSS SLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER
Sbjct: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300

Query: 301 DNSDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360
           D++DVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS
Sbjct: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360

Query: 361 EIKRTLNNWIARVAPDDFDSS-TRV 385
           EIKRTLNNWIARVAPDDFDSS TR+
Sbjct: 361 EIKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of ClCG01G018970 vs. ExPASy Swiss-Prot
Match: Q8WVT3 (Trafficking protein particle complex subunit 12 OS=Homo sapiens OX=9606 GN=TRAPPC12 PE=1 SV=3)

HSP 1 Score: 140.2 bits (352), Expect = 5.7e-32
Identity = 102/352 (28.98%), Postives = 175/352 (49.72%), Query Frame = 0


Query: 52  LQDLATRGSWRSILDKVAR---------ARALSLLQKPHDHLTYLSYNVLALVKMRRFAE 111
           L+ L +  +WR+ +D   R          ++  L     D L      +  LVK+  F  
Sbjct: 384 LKQLISCRNWRAAVDLCGRLLTAHGQGYGKSGLLTSHTTDSLQLWFVRLALLVKLGLFQN 443

Query: 112 ALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYE 171
           A  E +   +LD     YE YP VYP R GSMVPFS+R LHA +   +G  Q+ LDR ++
Sbjct: 444 AEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNPQESLDRLHK 503

Query: 172 --------LLDFVQSKVKDKELKNL-----DASVKLWKKREVFVINCIIGHHLSNKEFGV 231
                   L +  Q   +D  + ++      AS++LW+ R   V+  +    L  K++ +
Sbjct: 504 VKTVCSKILANLEQGLAEDGGMSSVTQEGRQASIRLWRSRLGRVMYSMANCLLLMKDYVL 563

Query: 232 CLTLINNLLS-QDFSDPALISKLGYIQMHVGDIEGAKRSFNRIEEMVKEGKSSGSLSEVE 291
            +   ++++      +P L+S +G I + +GDI+ A++ F  +E++ ++      L  ++
Sbjct: 564 AVEAYHSVIKYYPEQEPQLLSGIGRISLQIGDIKTAEKYFQDVEKVTQK------LDGLQ 623

Query: 292 IKNLVNRNKALVFLVGKDYLSAVREYEECIERDNSDVVAINNKALCLMYLRDLADSIKVL 351
            K +V  N A + L   ++  A R + E +  D  + VA NN A+CL+YL  L DS++ L
Sbjct: 624 GKIMVLMNSAFLHLGQNNFAEAHRFFTEILRMDPRNAVANNNAAVCLLYLGKLKDSLRQL 683

Query: 352 ENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTLNNWIARVAPDDFDS 381
           E  +++ P   L+E+V+ NL +MYEL      + K+ L   +A    D F++
Sbjct: 684 EAMVQQDPRHYLHESVLFNLTTMYELESSRSMQKKQALLEAVAGKEGDSFNT 729

[Close]

BLAST of ClCG01G018970 vs. ExPASy Swiss-Prot
Match: Q8K2L8 (Trafficking protein particle complex subunit 12 OS=Mus musculus OX=10090 GN=Trappc12 PE=1 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 5.7e-32
Identity = 108/355 (30.42%), Postives = 178/355 (50.14%), Query Frame = 0


Query: 52  LQDLATRGSWRSILDKVAR-------ARALSLLQKPH--DHLTYLSYNVLALVKMRRFAE 111
           L+ L +  +WR+ +D   R           + L   H  D L      +  LVK+  F  
Sbjct: 446 LKQLISCRNWRAAVDLCGRLLTAHGQGYGKNGLPTSHTTDSLQLWFVRLALLVKLGLFQN 505

Query: 112 ALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYE 171
           A  E +   +LD     YE YP VYP R GSMVPFS+R LHA +   +G  Q+ LDR + 
Sbjct: 506 AEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNPQESLDRLHR 565

Query: 172 --------LLDFVQSKVKDKELKNL-----DASVKLWKKREVFVINCIIGHHLSNKEFGV 231
                   L +  Q   +D  L ++      ASV+LW+ R   V+  +    L  K++ +
Sbjct: 566 VKTVCSKILANLEQGLAEDGGLSSVTQESRQASVQLWRSRLGRVLYSMANCLLLMKDYVL 625

Query: 232 C----LTLINNLLSQDFSDPALISKLGYIQMHVGDIEGAKRSFNRIEEMVKEGKSSGSLS 291
                LT+I     Q   +P L+S +G I + +GDI+ A++ F  +E++ ++      L 
Sbjct: 626 AVDAYLTVIKYYPEQ---EPQLLSGIGRILLQIGDIKTAEKYFQDVEKVTQK------LD 685

Query: 292 EVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERDNSDVVAINNKALCLMYLRDLADSI 351
            ++ K +V  N+A ++L   ++  A + + E +  D ++ VA NN A+CL+YL  L DS+
Sbjct: 686 GLQGKIMVLMNRAFLYLGQNNFAEAHKFFTEILRMDPTNAVANNNAAVCLLYLGKLKDSL 745

Query: 352 KVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTLNNWIARVAPDDFDS 381
           + LE  +++ P   L+E+V+ NL +MYEL      + K++L   +A    D F++
Sbjct: 746 RQLEAMVQQDPRHYLHESVLFNLTTMYELESSRSMQKKQSLLEAVASKEGDSFNT 791

[Close]

BLAST of ClCG01G018970 vs. ExPASy TrEMBL
Match: A0A5A7SYI2 (Trafficking protein particle complex subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002640 PE=4 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 2.1e-199
Identity = 363/384 (94.53%), Postives = 373/384 (97.14%), Query Frame = 0


Query: 1   METE--SPSPDSHSNRTSDPETLTTGIEELTISSDPLTSQFRSLNDLAPELSSLQDLATR 60
           METE  SPSPDSHS+ TSDPETLTTGIE LTISSDPLT+QF SLNDLA +LSSLQDLATR
Sbjct: 1   METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR 60

Query: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKMRRFAEALAELDSLEDLDSSQY 120
           GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVK+RRFAEALAELDSLEDL+SSQY
Sbjct: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120

Query: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKELKN 180
           RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSK+KDKE K 
Sbjct: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK 180

Query: 181 LDASVKLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSQDFSDPALISKLGYIQMHV 240
           LD SV LWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLS+DFSDPALISKLGYIQMH 
Sbjct: 181 LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240

Query: 241 GDIEGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300
           GDIEGAKRSFNRIEE+VKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI
Sbjct: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300

Query: 301 ERDNSDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360
           ERDNSD+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN
Sbjct: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360

Query: 361 HSEIKRTLNNWIARVAPDDFDSST 383
           HSEIKRTLNNWIARVAPDDFDSS+
Sbjct: 361 HSEIKRTLNNWIARVAPDDFDSSS 384

[Close]

BLAST of ClCG01G018970 vs. ExPASy TrEMBL
Match: A0A1S4DUA2 (trafficking protein particle complex subunit 12 OS=Cucumis melo OX=3656 GN=LOC103484996 PE=4 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 2.1e-199
Identity = 363/384 (94.53%), Postives = 373/384 (97.14%), Query Frame = 0


Query: 1   METE--SPSPDSHSNRTSDPETLTTGIEELTISSDPLTSQFRSLNDLAPELSSLQDLATR 60
           METE  SPSPDSHS+ TSDPETLTTGIE LTISSDPLT+QF SLNDLA +LSSLQDLATR
Sbjct: 1   METESPSPSPDSHSHSTSDPETLTTGIENLTISSDPLTTQFGSLNDLAHDLSSLQDLATR 60

Query: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKMRRFAEALAELDSLEDLDSSQY 120
           GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVK+RRFAEALAELDSLEDL+SSQY
Sbjct: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120

Query: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKELKN 180
           RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSK+KDKE K 
Sbjct: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKLKDKEEKK 180

Query: 181 LDASVKLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSQDFSDPALISKLGYIQMHV 240
           LD SV LWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLS+DFSDPALISKLGYIQMH 
Sbjct: 181 LDVSVNLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240

Query: 241 GDIEGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300
           GDIEGAKRSFNRIEE+VKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI
Sbjct: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300

Query: 301 ERDNSDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360
           ERDNSD+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN
Sbjct: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360

Query: 361 HSEIKRTLNNWIARVAPDDFDSST 383
           HSEIKRTLNNWIARVAPDDFDSS+
Sbjct: 361 HSEIKRTLNNWIARVAPDDFDSSS 384

[Close]

BLAST of ClCG01G018970 vs. ExPASy TrEMBL
Match: A0A6J1HII0 (trafficking protein particle complex subunit 12 OS=Cucurbita moschata OX=3662 GN=LOC111463298 PE=4 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 1.2e-194
Identity = 354/385 (91.95%), Postives = 374/385 (97.14%), Query Frame = 0


Query: 1   METESPSPDSHSNRTSDPETLTTGIEELTISSDPLTSQFRSLNDLAPELSSLQDLATRGS 60
           ME+ESPSPDS ++RTSDPETLT+ IE LTISSDPLTS+F SL+DLA ELSSLQDLATRGS
Sbjct: 1   MESESPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60

Query: 61  WRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKMRRFAEALAELDSLEDLDSSQYRY 120
           WRSILDKVARAR+LSLLQKPHDHLTYLSYNVLALVK+RRFAE LAELDSLEDLDSSQYRY
Sbjct: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120

Query: 121 ESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKELKNLD 180
           E+YPSVYPNRTGSMVPFSLRWLHALIPIKMGERQ+GLDRFYELLDFVQSKVKDK+ KNLD
Sbjct: 121 ETYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180

Query: 181 ASVKLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSQDFSDPALISKLGYIQMHVGD 240
            SV LWKKREVFVINCI+GHHLSNKEFGVCL+LI+NLLS+DFSDPALISKLGYIQMHVGD
Sbjct: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240

Query: 241 IEGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300
           IEGAKRSFN+IE+MVKEGKSS SLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER
Sbjct: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300

Query: 301 DNSDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360
           D++DVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS
Sbjct: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360

Query: 361 EIKRTLNNWIARVAPDDFDSS-TRV 385
           EIKRTLNNWIARVAPDDFDSS TR+
Sbjct: 361 EIKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of ClCG01G018970 vs. ExPASy TrEMBL
Match: A0A0A0KGA7 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500620 PE=4 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 2.1e-194
Identity = 355/384 (92.45%), Postives = 367/384 (95.57%), Query Frame = 0


Query: 1   METE--SPSPDSHSNRTSDPETLTTGIEELTISSDPLTSQFRSLNDLAPELSSLQDLATR 60
           METE  SPSPDSHS+ TSDPETLTTG E L ISSDPLT+QF SLNDLA +L SLQDLATR
Sbjct: 1   METESPSPSPDSHSHSTSDPETLTTGFENLAISSDPLTTQFGSLNDLAHDLFSLQDLATR 60

Query: 61  GSWRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKMRRFAEALAELDSLEDLDSSQY 120
           GSWRSILDKVARARAL+LLQKPHDHLTYLSYNVLALVK+RRFAEALAELDSLEDL+SSQY
Sbjct: 61  GSWRSILDKVARARALTLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQY 120

Query: 121 RYESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKELKN 180
           RYESYPSVYPNRTGSMVPFSLRWL ALIPIKMGERQ GLDRFYELLDFVQSK+KDKE K 
Sbjct: 121 RYESYPSVYPNRTGSMVPFSLRWLQALIPIKMGERQHGLDRFYELLDFVQSKLKDKEEKK 180

Query: 181 LDASVKLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSQDFSDPALISKLGYIQMHV 240
           LD SV LWKKR VFVINCIIGHHLSNKEFGVCLTLINNLLS+DFSDPALISKLGYIQMH 
Sbjct: 181 LDVSVNLWKKRVVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHA 240

Query: 241 GDIEGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECI 300
           GDIEGAKRSFNRIEE+VKEGKSSGSLSEVE+KNLVNRNKALVFLVGKDYLSAVREYEECI
Sbjct: 241 GDIEGAKRSFNRIEELVKEGKSSGSLSEVEMKNLVNRNKALVFLVGKDYLSAVREYEECI 300

Query: 301 ERDNSDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360
           ERDNSD+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN
Sbjct: 301 ERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVN 360

Query: 361 HSEIKRTLNNWIARVAPDDFDSST 383
           HSEIKRTLNNWIARVAPDDFDSS+
Sbjct: 361 HSEIKRTLNNWIARVAPDDFDSSS 384

[Close]

BLAST of ClCG01G018970 vs. ExPASy TrEMBL
Match: A0A6J1KTF6 (trafficking protein particle complex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111497457 PE=4 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 3.0e-193
Identity = 352/385 (91.43%), Postives = 372/385 (96.62%), Query Frame = 0


Query: 1   METESPSPDSHSNRTSDPETLTTGIEELTISSDPLTSQFRSLNDLAPELSSLQDLATRGS 60
           ME+ESPSPDS ++RTSDPETLT+ IE LTISSDPLTS+F SL+DLA ELSSLQDLATRGS
Sbjct: 1   MESESPSPDSGTHRTSDPETLTSAIEGLTISSDPLTSKFSSLDDLAHELSSLQDLATRGS 60

Query: 61  WRSILDKVARARALSLLQKPHDHLTYLSYNVLALVKMRRFAEALAELDSLEDLDSSQYRY 120
           WRSILDKVARAR+LSLLQKPHDHLTYLSYNVLALVK+RRFAE LAELDSLEDLDSSQYRY
Sbjct: 61  WRSILDKVARARSLSLLQKPHDHLTYLSYNVLALVKLRRFAEGLAELDSLEDLDSSQYRY 120

Query: 121 ESYPSVYPNRTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKELKNLD 180
           E+YP VYPNRTGSMVPFSLRWLHALIPIKMGERQ+GLDRFYELLDFVQSKVKDK+ KNLD
Sbjct: 121 ETYPIVYPNRTGSMVPFSLRWLHALIPIKMGERQEGLDRFYELLDFVQSKVKDKQEKNLD 180

Query: 181 ASVKLWKKREVFVINCIIGHHLSNKEFGVCLTLINNLLSQDFSDPALISKLGYIQMHVGD 240
            SV LWKKREVFVINCI+GHHLSNKEFGVCL+LI+NLLS+DFSDPALISKLGYIQMHVGD
Sbjct: 181 VSVDLWKKREVFVINCIMGHHLSNKEFGVCLSLIDNLLSRDFSDPALISKLGYIQMHVGD 240

Query: 241 IEGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIER 300
           IEGAKRSFN+IE+MVKEGKSS SLSEVEIKNLVNRNKALVFLV KDYLSAVREYEECIER
Sbjct: 241 IEGAKRSFNKIEDMVKEGKSSVSLSEVEIKNLVNRNKALVFLVSKDYLSAVREYEECIER 300

Query: 301 DNSDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360
           D++DVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS
Sbjct: 301 DHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS 360

Query: 361 EIKRTLNNWIARVAPDDFDSS-TRV 385
           EIKRTLNNWIARVAPDDFDSS TR+
Sbjct: 361 EIKRTLNNWIARVAPDDFDSSCTRI 385

[Close]

BLAST of ClCG01G018970 vs. TAIR 10
Match: AT4G39820.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 492.3 bits (1266), Expect = 4.2e-139
Identity = 235/376 (62.50%), Postives = 310/376 (82.45%), Query Frame = 0


Query: 10  SHSNRTSDPETLTTGIEELTISSDPLTSQFRSLNDLAPELSSLQDLATRGSWRSILDKVA 69
           + S    +P        ++T  +D    +F SL++L  +L SL +L+TRGSW++IL+K++
Sbjct: 33  AESTDAGEPTAFELASSQVTSVADLPPERFNSLDELTHDLGSLHELSTRGSWQAILEKIS 92

Query: 70  RARALSLLQKPHDHLTYLSYNVLALVKMRRFAEALAELDSLEDLDSSQYRYESYPSVYPN 129
           +ARAL LL KPH+HLTYL+Y V+AL K+RR  EA  EL+SL D D + YRYES+P +YPN
Sbjct: 93  QARALFLLTKPHEHLTYLTYQVMALAKLRRSDEASHELNSLHDFDGTHYRYESFPEIYPN 152

Query: 130 RTGSMVPFSLRWLHALIPIKMGERQDGLDRFYELLDFVQSKVKDKELKNLDASVKLWKKR 189
           R GSMVPFSLRWL+ALIP K+G RQ+GLDR Y LLDFV+ ++++KE ++L++SV+LWKKR
Sbjct: 153 RRGSMVPFSLRWLYALIPTKLGNRQEGLDRLYVLLDFVRDRIREKESQSLESSVELWKKR 212

Query: 190 EVFVINCIIGHHLSNKEFGVCLTLINNLLSQDFSDPALISKLGYIQMHVGDIEGAKRSFN 249
           E FV+NC++G HL +KEFGV L L+  L+++D  DP LISKLG +QM  GD+EGAK +F+
Sbjct: 213 ETFVMNCLLGFHLGHKEFGVSLDLMKELINRDPLDPVLISKLGSVQMQFGDVEGAKTTFD 272

Query: 250 RIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFLVGKDYLSAVREYEECIERDNSDVVAIN 309
           R+E+M+ EGKS+G L+E++  NLV RNKALV++V KDY+SAVREY++CIERDNSD++A+N
Sbjct: 273 RVEKMLNEGKSNGLLNEIQFNNLVGRNKALVYVVAKDYVSAVREYDKCIERDNSDIIAVN 332

Query: 310 NKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTLNNW 369
           NKALCLMYLRDL+D+IKV+E+ALERVPT ALNE+++VNLCSMYELAYVNH+++KRTLNNW
Sbjct: 333 NKALCLMYLRDLSDAIKVMESALERVPTAALNESLVVNLCSMYELAYVNHTDVKRTLNNW 392

Query: 370 IARVAPDDFDSS-TRV 385
           IARVAPDDFDSS TRV
Sbjct: 393 IARVAPDDFDSSCTRV 408

The following BLAST results are available for this feature:

BLAST of ClCG01G018970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882977.1	4.4e-199	94.76	trafficking protein particle complex subunit 12 [Benincasa hispida]	[more]
XP_016899300.1	4.4e-199	94.53	PREDICTED: trafficking protein particle complex subunit 12 [Cucumis melo] >KAA00...	[more]
XP_022962944.1	2.5e-194	91.95	trafficking protein particle complex subunit 12 [Cucurbita moschata]	[more]
XP_004143481.1	4.3e-194	92.45	trafficking protein particle complex subunit 12 [Cucumis sativus] >KGN48770.1 hy...	[more]
KAG7026829.1	1.2e-193	91.69	Trafficking protein particle complex subunit 12, partial [Cucurbita argyrosperma...	[more]

BLAST of ClCG01G018970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8WVT3	5.7e-32	28.98	Trafficking protein particle complex subunit 12 OS=Homo sapiens OX=9606 GN=TRAPP...	[more]
Q8K2L8	5.7e-32	30.42	Trafficking protein particle complex subunit 12 OS=Mus musculus OX=10090 GN=Trap...	[more]

BLAST of ClCG01G018970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYI2	2.1e-199	94.53	Trafficking protein particle complex subunit 12 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S4DUA2	2.1e-199	94.53	trafficking protein particle complex subunit 12 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1HII0	1.2e-194	91.95	trafficking protein particle complex subunit 12 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0KGA7	2.1e-194	92.45	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500620 ...	[more]
A0A6J1KTF6	3.0e-193	91.43	trafficking protein particle complex subunit 12 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of ClCG01G018970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39820.1	4.2e-139	62.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 225..258 e-value: 260.0 score: 2.5 coord: 305..338 e-value: 0.32 score: 20.1 coord: 271..304 e-value: 190.0 score: 3.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 200..396 e-value: 1.4E-13 score: 52.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 214..340
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR21581:SF28	F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED	coord: 32..382
None	No IPR available	PANTHER	PTHR21581	D-ALANYL-D-ALANINE CARBOXYPEPTIDASE	coord: 32..382

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G018970.2	ClCG01G018970.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity