ClCG01G017220 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G017220
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Gibberellin regulated protein
Location	CG_Chr01: 31785491 .. 31787426 (-)
RNA-Seq Expression	ClCG01G017220
Synteny	ClCG01G017220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTACATAAGTACATGTAAAATAATTGATTAAGTCCCATTTTGTATTTTTCAGGTGGGAAGATCGAGGGGAGGGAATAAAAAGTTCCTAGGCAATACACAGTTTAATCTCCCATCTTTTATTCTTTATATATAAAATCAACCAAATTTTGTTGTCACAAATAATATTTTGTTATTTTAAGTATATTTTTTAAGGTTAAATTATAAATTTAGTCTCTCAACTTTTATGTTTGTGTTTATTTGATCTATAGACTTTCAAAAGTGTTTAATACATCTCTCAACTTTCAGTCTTTTCCAATTTTTTTCAAATGAGTTCCTAACAAGTTCAAAAATTTTAAAAATTAATTGATCTATCAGATATAAATTTGAATTTCATTACTAATGAAACCCTGAACTATTAATTTTGTGTCTAGTAGGTTCGAGAATTTGTAAAATTTTGAAGGTTCATAGACTAACTAAATTTGTAACTGTAATATTGAAAATTTAGGAACTAAATAGACATAAACCACAATTTAGAGTCTAAATTTATAATATAATAATTTCTTTAATTATTAATTGATATGGCACTACCCGTATATTTTAGTGTAATGAATATTTCCATATATAATTTTTTTAGAAAGATCTACCCACTCCACATGGTCTAACACAATATCTAACCCAACCCAAAATCAGTAGCTAAGGTAGAAAATGGACCCATTAAAAAATTAGCAACATGCTAACCATTGGCCACTATATTAACTCAAACCTCGTTTGATAGGGGTGTGGTTTTTGAAACTTAAGATTATAAACACTAAATTTACTTATGAATTTATTTATTTTGTTATCTATCATTTAAGGAAATTTTTACAATCCAAGCCAAGTTTTGAAAACCATAAAAATAATTTTTAAGAACTCATTTTTGTTTGGAAAAAATTATAATTTTTAAAAATTAAAAAACAAAATAATTATCGAACAGTACGCGAAAGTCTTCATCTTCCGATTATTTCCAGGCCCATACAATGCATGCACAGGGACACAAAAAGAAGTTAGTTGCTGGTGTCCTTCCAAAGAAATATAAACAAAAGAAAATTTCAGGAGTGCAGACAGCTCAAGCCCCCAAACATACCTAAACCATACATCTTTACACTCTGGTTGGGGCTGTAAACCATTCTTATAAGCATTTTGCCATGCCTTTCCCTCATGGGTCATCCTATTGATTCATGCCCCACTTTTCAATTAATAAAACATTCTTTACAGACCTTTTCCATCCTCTCATTCCCCGCCACTCCACAAACCAAGTCTATAAATATCAGATAGAAACTATTGAAATGTCAGTAGAACACTAACCTTAAAGCAGAAGGAGAAAGATGAAATCTGCTTCTGTCACTTTGCTTCTTCTTTCATTCATTCTGAGCTCCTTCCTCCTCCAATATGCCATTGCTGATTCCTCTACAACGTATGCTCCAAGTAAGATAATGATTTACCATTAATATATAAGTACTATTGGCAATGAATATACAACCTTTCATTATTCCTCCTTGTTCAAGTGATTAACTGGTTTATTGTATGACTTTTTTTCTTTCTTTTTGTTTTCTTCTTTTGGAAGGTGTTTGTGATTCAAAATGTGGGGTAAGATGCTTGAATGCAGGGGTGAAGGACAGGTGCTTGAAGTATTGTGGACTTTGCTGCCAACAGTGCAATTGTGTGCCCTCTGGAACCTATGGAAACAAGTCAGAATGCCCTTGTTATAGAGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGATTTCATTTTTCATTTATTTTCCCTCCCTTGAAATCTGTCATGTTTTCACTTCTCAATCACTTTGAATCTAATTTCCTTTCTTCCCTGCAGTTTCTTAAACTTGAGTGGGTGTCTGTGACATGACCAAATACATTCATTGAATCAAACTGAAACATATTAATGCC

mRNA sequence

ATGAAAAGGAGAAAGATGAAATCTGCTTCTGTCACTTTGCTTCTTCTTTCATTCATTCTGAGCTCCTTCCTCCTCCAATATGCCATTGCTGATTCCTCTACAACGTATGCTCCAAGTGTTTGTGATTCAAAATGTGGGGTAAGATGCTTGAATGCAGGGGTGAAGGACAGGTGCTTGAAGTATTGTGGACTTTGCTGCCAACAGTGCAATTGTGTGCCCTCTGGAACCTATGGAAACAAGTCAGAATGCCCTTGTTATAGAGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGATTTCATTTTTCATTTATTTTCCCTCCCTTGAAATCTGTCATGTTTTCACTTCTCAATCACTTTGAATCTAATTTCCTTTCTTCCCTGCAGTTTCTTAAACTTGAGTGGGTGTCTGTGACATGACCAAATACATTCATTGAATCAAACTGAAACATATTAATGCC

Coding sequence (CDS)

ATGAAAAGGAGAAAGATGAAATCTGCTTCTGTCACTTTGCTTCTTCTTTCATTCATTCTGAGCTCCTTCCTCCTCCAATATGCCATTGCTGATTCCTCTACAACGTATGCTCCAAGTGTTTGTGATTCAAAATGTGGGGTAAGATGCTTGAATGCAGGGGTGAAGGACAGGTGCTTGAAGTATTGTGGACTTTGCTGCCAACAGTGCAATTGTGTGCCCTCTGGAACCTATGGAAACAAGTCAGAATGCCCTTGTTATAGAGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGA

Protein sequence

MKRRKMKSASVTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Homology

[Close]

BLAST of ClCG01G017220 vs. NCBI nr
Match: XP_038880848.1 (peamaclein-like [Benincasa hispida])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 90/94 (95.74%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 65
           MKSASV L+LLS ILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCG+C
Sbjct: 1   MKSASVILVLLSLILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGIC 60

Query: 66  CQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           CQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61  CQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of ClCG01G017220 vs. NCBI nr
Match: XP_008440339.1 (PREDICTED: peamaclein-like [Cucumis melo])

HSP 1 Score: 185.7 bits (470), Expect = 2.0e-43
Identity = 88/94 (93.62%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 65
           MKS SVTL+LLSFILSSF LQY  ADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC
Sbjct: 1   MKSLSVTLVLLSFILSSFFLQYGTADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 60

Query: 66  CQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           CQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61  CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of ClCG01G017220 vs. NCBI nr
Match: XP_031742788.1 (peamaclein-like isoform X2 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 2.6e-43
Identity = 88/94 (93.62%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 65
           MKS SVTL+LLS ILSSF LQYA ADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC
Sbjct: 1   MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 60

Query: 66  CQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           CQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61  CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of ClCG01G017220 vs. NCBI nr
Match: XP_031742787.1 (peamaclein-like isoform X1 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 1.9e-41
Identity = 87/95 (91.58%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAP-SVCDSKCGVRCLNAGVKDRCLKYCGL 65
           MKS SVTL+LLS ILSSF LQYA ADSSTTYAP  VCDSKCGVRCLNAGVKDRCLKYCGL
Sbjct: 1   MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGL 60

Query: 66  CCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           CCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61  CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95

[Close]

BLAST of ClCG01G017220 vs. NCBI nr
Match: KAG7026958.1 (Snakin-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 177.2 bits (448), Expect = 7.1e-41
Identity = 82/94 (87.23%), Postives = 88/94 (93.62%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 65
           MKS S++L+L+S +LSSFLLQ+AIADSS TYAPS CDSKCG RCLNAGVKDRCLKYCGLC
Sbjct: 1   MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60

Query: 66  CQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           CQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61  CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of ClCG01G017220 vs. ExPASy Swiss-Prot
Match: Q948Z4 (Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-27
Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 65
           MK   +TLLL++ +++  L+Q  +A S      S CDSKC +RC  AG+ DRCLKYCG+C
Sbjct: 1   MKLFLLTLLLVTLVITPSLIQTTMAGS------SFCDSKCKLRCSKAGLADRCLKYCGIC 60

Query: 66  CQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           C++C CVPSGTYGNK ECPCYRDK NSKGKSKCP
Sbjct: 61  CEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88

[Close]

BLAST of ClCG01G017220 vs. ExPASy Swiss-Prot
Match: P86888 (Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-24
Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 39  SVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKC 98
           S CDSKCGVRC  AG ++RCLKYCG+CC++C+CVPSGTYGNK ECPCYRD  NSKG  KC
Sbjct: 3   SFCDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNPKC 62

Query: 99  P 100
           P
Sbjct: 63  P 63

[Close]

BLAST of ClCG01G017220 vs. ExPASy Swiss-Prot
Match: Q8LFM2 (Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.3e-24
Identity = 55/95 (57.89%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 65
           MK  +V +L++S +++S L   + ADSS       C  KC VRC  AG +DRCLKYC +C
Sbjct: 1   MKFPAVKVLIISLLITSSLFILSTADSSP------CGGKCNVRCSKAGRQDRCLKYCNIC 60

Query: 66  CQQCN-CVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           C++CN CVPSGTYGNK ECPCYRD  NSKG SKCP
Sbjct: 61  CEKCNYCVPSGTYGNKDECPCYRDMKNSKGTSKCP 89

[Close]

BLAST of ClCG01G017220 vs. ExPASy Swiss-Prot
Match: O82328 (Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.5e-22
Identity = 52/97 (53.61%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 12  TLLLLSFILSSFLLQYAIADSSTTYAPSV---------CDSKCGVRCLNAGVKDRCLKYC 71
           +LLL+S  L+S  +  A    +   AP           C  KC  RC  AG+KDRCLKYC
Sbjct: 12  SLLLISSSLASATISDAFGSGAVAPAPQSKDGPALEKWCGQKCEGRCKEAGMKDRCLKYC 71

Query: 72  GLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           G+CC+ C CVPSGTYGNK EC CYRDKL+SKG  KCP
Sbjct: 72  GICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108

[Close]

BLAST of ClCG01G017220 vs. ExPASy Swiss-Prot
Match: O80641 (Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.5e-22
Identity = 51/94 (54.26%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 65
           MK   V   ++S +L+S     + ADSS       C  KC VRC  AG  + CLKYC +C
Sbjct: 1   MKLVVVQFFIISLLLTSSFSVLSSADSS-------CGGKCNVRCSKAGQHEECLKYCNIC 60

Query: 66  CQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           CQ+CNCVPSGT+G+K ECPCYRD  NSKG SKCP
Sbjct: 61  CQKCNCVPSGTFGHKDECPCYRDMKNSKGGSKCP 87

[Close]

BLAST of ClCG01G017220 vs. ExPASy TrEMBL
Match: A0A1S3B1M5 (peamaclein-like OS=Cucumis melo OX=3656 GN=LOC103484820 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 9.7e-44
Identity = 88/94 (93.62%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 65
           MKS SVTL+LLSFILSSF LQY  ADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC
Sbjct: 1   MKSLSVTLVLLSFILSSFFLQYGTADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 60

Query: 66  CQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           CQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61  CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of ClCG01G017220 vs. ExPASy TrEMBL
Match: A0A0A0KLG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G493840 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 9.1e-42
Identity = 87/95 (91.58%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAP-SVCDSKCGVRCLNAGVKDRCLKYCGL 65
           MKS SVTL+LLS ILSSF LQYA ADSSTTYAP  VCDSKCGVRCLNAGVKDRCLKYCGL
Sbjct: 1   MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGL 60

Query: 66  CCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           CCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61  CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95

[Close]

BLAST of ClCG01G017220 vs. ExPASy TrEMBL
Match: A0A6J1HEX9 (peamaclein-like OS=Cucurbita moschata OX=3662 GN=LOC111463556 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.3e-40
Identity = 81/94 (86.17%), Postives = 87/94 (92.55%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 65
           MKS S++L+L+S +LSSFLLQ+AIADS  TYAPS CDSKCG RCLNAGVKDRCLKYCGLC
Sbjct: 1   MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60

Query: 66  CQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           CQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61  CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of ClCG01G017220 vs. ExPASy TrEMBL
Match: A0A6J1KSF0 (peamaclein-like OS=Cucurbita maxima OX=3661 GN=LOC111496836 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.5e-40
Identity = 80/94 (85.11%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 65
           MKS S++L+L+S ILSSFLL +AIADSS TY PS CDSKCG RCLNAGVKDRC+KYCGLC
Sbjct: 1   MKSGSLSLVLVSLILSSFLLPHAIADSSATYVPSFCDSKCGARCLNAGVKDRCIKYCGLC 60

Query: 66  CQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           CQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61  CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of ClCG01G017220 vs. ExPASy TrEMBL
Match: A0A2P5FSJ8 (Gibberellin regulated protein OS=Trema orientale OX=63057 GN=TorRG33x02_034060 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.1e-31
Identity = 66/94 (70.21%), Postives = 75/94 (79.79%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 65
           MK   + LLL+S   SS LLQ+ +AD +    PS CDSKC +RC NAGVKDRCLKYCG+C
Sbjct: 1   MKLVVLVLLLVSLFFSSSLLQFTVADPTNAVGPSTCDSKCEMRCANAGVKDRCLKYCGIC 60

Query: 66  CQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           CQQC+CVPSGTYGNKSECPCYRDKL+SKG  KCP
Sbjct: 61  CQQCSCVPSGTYGNKSECPCYRDKLSSKGTPKCP 94

[Close]

BLAST of ClCG01G017220 vs. TAIR 10
Match: AT5G59845.1 (Gibberellin-regulated family protein )

HSP 1 Score: 111.3 bits (277), Expect = 4.5e-25
Identity = 55/95 (57.89%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 65
           MK  +V +L++S +++S L   + ADSS       C  KC VRC  AG +DRCLKYC +C
Sbjct: 1   MKFPAVKVLIISLLITSSLFILSTADSSP------CGGKCNVRCSKAGRQDRCLKYCNIC 60

Query: 66  CQQCN-CVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           C++CN CVPSGTYGNK ECPCYRD  NSKG SKCP
Sbjct: 61  CEKCNYCVPSGTYGNKDECPCYRDMKNSKGTSKCP 89

[Close]

BLAST of ClCG01G017220 vs. TAIR 10
Match: AT2G39540.1 (Gibberellin-regulated family protein )

HSP 1 Score: 105.1 bits (261), Expect = 3.2e-23
Identity = 51/94 (54.26%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 6   MKSASVTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 65
           MK   V   ++S +L+S     + ADSS       C  KC VRC  AG  + CLKYC +C
Sbjct: 1   MKLVVVQFFIISLLLTSSFSVLSSADSS-------CGGKCNVRCSKAGQHEECLKYCNIC 60

Query: 66  CQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           CQ+CNCVPSGT+G+K ECPCYRD  NSKG SKCP
Sbjct: 61  CQKCNCVPSGTFGHKDECPCYRDMKNSKGGSKCP 87

[Close]

BLAST of ClCG01G017220 vs. TAIR 10
Match: AT2G14900.1 (Gibberellin-regulated family protein )

HSP 1 Score: 105.1 bits (261), Expect = 3.2e-23
Identity = 52/97 (53.61%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 12  TLLLLSFILSSFLLQYAIADSSTTYAPSV---------CDSKCGVRCLNAGVKDRCLKYC 71
           +LLL+S  L+S  +  A    +   AP           C  KC  RC  AG+KDRCLKYC
Sbjct: 12  SLLLISSSLASATISDAFGSGAVAPAPQSKDGPALEKWCGQKCEGRCKEAGMKDRCLKYC 71

Query: 72  GLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           G+CC+ C CVPSGTYGNK EC CYRDKL+SKG  KCP
Sbjct: 72  GICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108

[Close]

BLAST of ClCG01G017220 vs. TAIR 10
Match: AT1G10588.1 (Gibberellin-regulated family protein )

HSP 1 Score: 95.1 bits (235), Expect = 3.3e-20
Identity = 48/90 (53.33%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 11  VTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAG-VKDRCLKYCGLCCQQC 70
           V   ++S +L+S     + ADS      S C  KC VRC  A    + CL+ C +CCQ+C
Sbjct: 7   VQFFIISLLLTSSFYVLSSADS------SACGGKCSVRCSKADRTHEECLEDCDICCQKC 66

Query: 71  NCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           NCVPSGTYGNK ECPCYRD  NSKG SKCP
Sbjct: 67  NCVPSGTYGNKDECPCYRDMKNSKGGSKCP 90

[Close]

BLAST of ClCG01G017220 vs. TAIR 10
Match: AT1G10588.2 (Gibberellin-regulated family protein )

HSP 1 Score: 94.7 bits (234), Expect = 4.3e-20
Identity = 48/90 (53.33%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 11  VTLLLLSFILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAG-VKDRCLKYCGLCCQQC 70
           V   ++S +L+S     + ADSS       C  KC VRC  A    + CL+ C +CCQ+C
Sbjct: 7   VQFFIISLLLTSSFYVLSSADSS-------CGGKCSVRCSKADRTHEECLEDCDICCQKC 66

Query: 71  NCVPSGTYGNKSECPCYRDKLNSKGKSKCP 100
           NCVPSGTYGNK ECPCYRD  NSKG SKCP
Sbjct: 67  NCVPSGTYGNKDECPCYRDMKNSKGGSKCP 89

The following BLAST results are available for this feature:

BLAST of ClCG01G017220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880848.1	1.4e-44	95.74	peamaclein-like [Benincasa hispida]	[more]
XP_008440339.1	2.0e-43	93.62	PREDICTED: peamaclein-like [Cucumis melo]	[more]
XP_031742788.1	2.6e-43	93.62	peamaclein-like isoform X2 [Cucumis sativus]	[more]
XP_031742787.1	1.9e-41	91.58	peamaclein-like isoform X1 [Cucumis sativus]	[more]
KAG7026958.1	7.1e-41	87.23	Snakin-1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of ClCG01G017220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q948Z4	1.6e-27	61.70	Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1	[more]
P86888	1.7e-24	75.41	Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1	[more]
Q8LFM2	6.3e-24	57.89	Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 ...	[more]
O82328	4.5e-22	53.61	Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV...	[more]
O80641	4.5e-22	54.26	Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=...	[more]

BLAST of ClCG01G017220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B1M5	9.7e-44	93.62	peamaclein-like OS=Cucumis melo OX=3656 GN=LOC103484820 PE=3 SV=1	[more]
A0A0A0KLG3	9.1e-42	91.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G493840 PE=3 SV=1	[more]
A0A6J1HEX9	1.3e-40	86.17	peamaclein-like OS=Cucurbita moschata OX=3662 GN=LOC111463556 PE=3 SV=1	[more]
A0A6J1KSF0	6.5e-40	85.11	peamaclein-like OS=Cucurbita maxima OX=3661 GN=LOC111496836 PE=3 SV=1	[more]
A0A2P5FSJ8	1.1e-31	70.21	Gibberellin regulated protein OS=Trema orientale OX=63057 GN=TorRG33x02_034060 P...	[more]

BLAST of ClCG01G017220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59845.1	4.5e-25	57.89	Gibberellin-regulated family protein	[more]
AT2G39540.1	3.2e-23	54.26	Gibberellin-regulated family protein	[more]
AT2G14900.1	3.2e-23	53.61	Gibberellin-regulated family protein	[more]
AT1G10588.1	3.3e-20	53.33	Gibberellin-regulated family protein	[more]
AT1G10588.2	4.3e-20	53.33	Gibberellin-regulated family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 41..99 e-value: 5.1E-22 score: 77.8
None	No IPR available	PANTHER	PTHR23201:SF54	SUBFAMILY NOT NAMED	coord: 9..99
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 9..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G017220.2	ClCG01G017220.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
cellular_component	GO:0005576	extracellular region