ClCG01G017160 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG01G017160
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPentatricopeptide repeat-containing protein
LocationCG_Chr01: 31713081 .. 31715003 (-)
RNA-Seq ExpressionClCG01G017160
SyntenyClCG01G017160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCTTCTTCCTTTTTCACAGCTTCACTTCCATCGCCGCCGCCAATTTTCACCACTAACCGTTCATCTGTCTTACCATCTTCTTCTTCTACCGCCAGAACCTCCGATCGTTCCCAACAAGTAGAAAGGTTCGCCTTACTAATCGATAAATCGAAATCCGTCGACCGCCTGCTTCAAATCCACGCTTCTCTTCTCCGCCACGGGCATTACCACAACCCCATCTTAAATTTCAAGCTCCAACGCTCATACGCCGCTCTCGGACGCCTTGATTACTCGGTGGCCGTTTTTGACACCTCCGATGAACCCAATGTCTTTTCATTTAGTGCAATTATCCACAGCCACGTACAATGTCGATTATTTGACCGAGCTCTCGGTTACTATTCGCAAATGCTAACCCGTGGTGTGGAGCCCAATGTTTTCACCTTCTCTTCAGTCCTGAAATCCTGCTCACTCGAACCCGGAAAAGTCCTCCATTGTCAAGCAATAAAACTCGGATTCGATTCTGATTTGTATGTCAGAACGGGACTGGTCGATGTATACGCGAGAGGGGGCGATGTGGTATGCGCACGCCAACTGTTTGATAAAATGCCTGAGAGAAGTTTGGTTTCTCAAACGGCCATGCTTGCTTGCTACGCGAAGCTGGGGGAGCTTGACGAGGCACGGGCTTTGTTCGACGGGATGAAACAGAGGGATGTTGTTTGTTGGAATGTGATGATTGGTGGGTACGCGCAGAATGGTCTTCCCAATGAATCGTTGAAACTTTTCAGGCGAATGTTGGTGGCGAAAGCTATGCCCAATGAAATAACAATTCTGGCTGTGCTTTCGGCCTGTGGGCAACTCGGAGCCCTCGAATCTGGAAGGTGGGTTCATTCGTATATTGAGAATAAGGGCATTCAGATAAACGTTCATGTGGGCACTGCACTTATTGATATGTATAGCAAATGTGGTAGCTTGGAAGATGCACGTTTGGTATTTGATGGAATTCGGGATAAGGATGTGGTCGCCTGGAATTCGATGATTGTTGGGTATTCCATGCATGGATTTAGCCAAAATGCATTGAAGTTGTTCGAGGAAATGACTGAGACCGGATACCAGCCAACTGATATCACTTTCATTGGCCTTTTGAGTGCCTGCAGCCATGGCGGCTTGGTGGAGGAGGGAAGGAGTTTCTTCAGATTGATGAGAGACAAATACCTAATCGAACCAAAGGTCGAGCATTATGGATGTATGGTTAATCTTCTAGGACGTGCGGGACATCTAGAAGAAGCATATGAACTTGTGAAAAACATGTCGATTGCAGCTGACCCAGTTTTGTGGGGATCATTACTAGGGTCTTGTAGACTTCACGGTAACATTAAATTGGGAGAGGAAATTGCTGAGTTTCTTGTTGATCAGAAGCTTGCAAATTCAGGGACGTATGTTCTTCTTTCCAATATATATGCTGCAACAGGCAATTGGGAAGGGGTTGCAAAGATGAGGACGTTGATGAAAGAGCATGGCATTGAAAAGGAGCCTGGTTGCAGCTCAATTGAAGTTAACAATAAGGTGCATGAGTTCCTTGCTGGTGAGAGGAAACATCCCAAAAGCAAAGAAATCTATGTGATGTTGAATGAGATAAATAGCTGGCTCAAAGCTCGCAGATACACACCACAGATCGGTGTTGTTTTACATGATCTCGGGGAGGAACAGAAGAAGCAATCGCTCGAAGTTCACAGTGAGAAGCTTGCTATTGCCTTTGGGCTTATCAGTACTCAACCAGGCACCACTATCAAGATTGTGAAGAACCTCCGAGTTTGTTTAGATTGCCACGCTGTAATGAAGTTGATATCAGAAATTACTGGACGTAAAATTGTAATGAGGGACCGGAATCGTTTCCATCACTTTGAAAATGGATTATGTTCTTGTGGAGATTACTGGTGA

mRNA sequence

ATGTCATCTTCTTCCTTTTTCACAGCTTCACTTCCATCGCCGCCGCCAATTTTCACCACTAACCGTTCATCTGTCTTACCATCTTCTTCTTCTACCGCCAGAACCTCCGATCGTTCCCAACAAGTAGAAAGGTTCGCCTTACTAATCGATAAATCGAAATCCGTCGACCGCCTGCTTCAAATCCACGCTTCTCTTCTCCGCCACGGGCATTACCACAACCCCATCTTAAATTTCAAGCTCCAACGCTCATACGCCGCTCTCGGACGCCTTGATTACTCGGTGGCCGTTTTTGACACCTCCGATGAACCCAATGTCTTTTCATTTAGTGCAATTATCCACAGCCACGTACAATGTCGATTATTTGACCGAGCTCTCGGTTACTATTCGCAAATGCTAACCCGTGGTGTGGAGCCCAATGTTTTCACCTTCTCTTCAGTCCTGAAATCCTGCTCACTCGAACCCGGAAAAGTCCTCCATTGTCAAGCAATAAAACTCGGATTCGATTCTGATTTGTATGTCAGAACGGGACTGGTCGATGTATACGCGAGAGGGGGCGATGTGGTATGCGCACGCCAACTGTTTGATAAAATGCCTGAGAGAAGTTTGGTTTCTCAAACGGCCATGCTTGCTTGCTACGCGAAGCTGGGGGAGCTTGACGAGGCACGGGCTTTGTTCGACGGGATGAAACAGAGGGATGTTGTTTGTTGGAATGTGATGATTGGTGGGTACGCGCAGAATGGTCTTCCCAATGAATCGTTGAAACTTTTCAGGCGAATGTTGGTGGCGAAAGCTATGCCCAATGAAATAACAATTCTGGCTGTGCTTTCGGCCTGTGGGCAACTCGGAGCCCTCGAATCTGGAAGGTGGGTTCATTCGTATATTGAGAATAAGGGCATTCAGATAAACGTTCATGTGGGCACTGCACTTATTGATATGTATAGCAAATGTGGTAGCTTGGAAGATGCACGTTTGGTATTTGATGGAATTCGGGATAAGGATGTGGTCGCCTGGAATTCGATGATTGTTGGGTATTCCATGCATGGATTTAGCCAAAATGCATTGAAGTTGTTCGAGGAAATGACTGAGACCGGATACCAGCCAACTGATATCACTTTCATTGGCCTTTTGAGTGCCTGCAGCCATGGCGGCTTGGTGGAGGAGGGAAGGAGTTTCTTCAGATTGATGAGAGACAAATACCTAATCGAACCAAAGGTCGAGCATTATGGATGTATGGTTAATCTTCTAGGACGTGCGGGACATCTAGAAGAAGCATATGAACTTGTGAAAAACATGTCGATTGCAGCTGACCCAGTTTTGTGGGGATCATTACTAGGGTCTTGTAGACTTCACGGTAACATTAAATTGGGAGAGGAAATTGCTGAGTTTCTTGTTGATCAGAAGCTTGCAAATTCAGGGACGTATGTTCTTCTTTCCAATATATATGCTGCAACAGGCAATTGGGAAGGGGTTGCAAAGATGAGGACGTTGATGAAAGAGCATGGCATTGAAAAGGAGCCTGGTTGCAGCTCAATTGAAGTTAACAATAAGGTGCATGAGTTCCTTGCTGGTGAGAGGAAACATCCCAAAAGCAAAGAAATCTATGTGATGTTGAATGAGATAAATAGCTGGCTCAAAGCTCGCAGATACACACCACAGATCGGTGTTGTTTTACATGATCTCGGGGAGGAACAGAAGAAGCAATCGCTCGAAGTTCACAGTGAGAAGCTTGCTATTGCCTTTGGGCTTATCAGTACTCAACCAGGCACCACTATCAAGATTGTGAAGAACCTCCGAGTTTGTTTAGATTGCCACGCTGTAATGAAGTTGATATCAGAAATTACTGGACGTAAAATTGTAATGAGGGACCGGAATCGTTTCCATCACTTTGAAAATGGATTATGTTCTTGTGGAGATTACTGGTGA

Coding sequence (CDS)

ATGTCATCTTCTTCCTTTTTCACAGCTTCACTTCCATCGCCGCCGCCAATTTTCACCACTAACCGTTCATCTGTCTTACCATCTTCTTCTTCTACCGCCAGAACCTCCGATCGTTCCCAACAAGTAGAAAGGTTCGCCTTACTAATCGATAAATCGAAATCCGTCGACCGCCTGCTTCAAATCCACGCTTCTCTTCTCCGCCACGGGCATTACCACAACCCCATCTTAAATTTCAAGCTCCAACGCTCATACGCCGCTCTCGGACGCCTTGATTACTCGGTGGCCGTTTTTGACACCTCCGATGAACCCAATGTCTTTTCATTTAGTGCAATTATCCACAGCCACGTACAATGTCGATTATTTGACCGAGCTCTCGGTTACTATTCGCAAATGCTAACCCGTGGTGTGGAGCCCAATGTTTTCACCTTCTCTTCAGTCCTGAAATCCTGCTCACTCGAACCCGGAAAAGTCCTCCATTGTCAAGCAATAAAACTCGGATTCGATTCTGATTTGTATGTCAGAACGGGACTGGTCGATGTATACGCGAGAGGGGGCGATGTGGTATGCGCACGCCAACTGTTTGATAAAATGCCTGAGAGAAGTTTGGTTTCTCAAACGGCCATGCTTGCTTGCTACGCGAAGCTGGGGGAGCTTGACGAGGCACGGGCTTTGTTCGACGGGATGAAACAGAGGGATGTTGTTTGTTGGAATGTGATGATTGGTGGGTACGCGCAGAATGGTCTTCCCAATGAATCGTTGAAACTTTTCAGGCGAATGTTGGTGGCGAAAGCTATGCCCAATGAAATAACAATTCTGGCTGTGCTTTCGGCCTGTGGGCAACTCGGAGCCCTCGAATCTGGAAGGTGGGTTCATTCGTATATTGAGAATAAGGGCATTCAGATAAACGTTCATGTGGGCACTGCACTTATTGATATGTATAGCAAATGTGGTAGCTTGGAAGATGCACGTTTGGTATTTGATGGAATTCGGGATAAGGATGTGGTCGCCTGGAATTCGATGATTGTTGGGTATTCCATGCATGGATTTAGCCAAAATGCATTGAAGTTGTTCGAGGAAATGACTGAGACCGGATACCAGCCAACTGATATCACTTTCATTGGCCTTTTGAGTGCCTGCAGCCATGGCGGCTTGGTGGAGGAGGGAAGGAGTTTCTTCAGATTGATGAGAGACAAATACCTAATCGAACCAAAGGTCGAGCATTATGGATGTATGGTTAATCTTCTAGGACGTGCGGGACATCTAGAAGAAGCATATGAACTTGTGAAAAACATGTCGATTGCAGCTGACCCAGTTTTGTGGGGATCATTACTAGGGTCTTGTAGACTTCACGGTAACATTAAATTGGGAGAGGAAATTGCTGAGTTTCTTGTTGATCAGAAGCTTGCAAATTCAGGGACGTATGTTCTTCTTTCCAATATATATGCTGCAACAGGCAATTGGGAAGGGGTTGCAAAGATGAGGACGTTGATGAAAGAGCATGGCATTGAAAAGGAGCCTGGTTGCAGCTCAATTGAAGTTAACAATAAGGTGCATGAGTTCCTTGCTGGTGAGAGGAAACATCCCAAAAGCAAAGAAATCTATGTGATGTTGAATGAGATAAATAGCTGGCTCAAAGCTCGCAGATACACACCACAGATCGGTGTTGTTTTACATGATCTCGGGGAGGAACAGAAGAAGCAATCGCTCGAAGTTCACAGTGAGAAGCTTGCTATTGCCTTTGGGCTTATCAGTACTCAACCAGGCACCACTATCAAGATTGTGAAGAACCTCCGAGTTTGTTTAGATTGCCACGCTGTAATGAAGTTGATATCAGAAATTACTGGACGTAAAATTGTAATGAGGGACCGGAATCGTTTCCATCACTTTGAAAATGGATTATGTTCTTGTGGAGATTACTGGTGA

Protein sequence

MSSSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW
Homology
BLAST of ClCG01G017160 vs. NCBI nr
Match: XP_038882525.1 (pentatricopeptide repeat-containing protein ELI1, chloroplastic [Benincasa hispida])

HSP 1 Score: 1223.0 bits (3163), Expect = 0.0e+00
Identity = 599/640 (93.59%), Postives = 622/640 (97.19%), Query Frame = 0

Query: 1   MSSSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQ 60
           M SSSF TAS P PPPIFTTNRSSVLPSSSSTARTSD  QQVERFALLIDKSKS+ RLLQ
Sbjct: 1   MPSSSFLTASPPPPPPIFTTNRSSVLPSSSSTARTSDPFQQVERFALLIDKSKSIPRLLQ 60

Query: 61  IHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRL 120
           IHASLLRH  YHNPILNFKLQRSYAALGRLDYSVAVF+TSDEPNVFSFSAIIHSHVQCRL
Sbjct: 61  IHASLLRHRLYHNPILNFKLQRSYAALGRLDYSVAVFNTSDEPNVFSFSAIIHSHVQCRL 120

Query: 121 FDRALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDV 180
           FD+ALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDV
Sbjct: 121 FDQALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDV 180

Query: 181 YARGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMI 240
           YARGGDVVCARQLFDKMPERSLVS TAML CYAKLGELDEARALFDGMK+RDVVCWNVMI
Sbjct: 181 YARGGDVVCARQLFDKMPERSLVSLTAMLTCYAKLGELDEARALFDGMKERDVVCWNVMI 240

Query: 241 GGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQ 300
           GGYAQNGLPNESLKLFRRMLVAKA+PNE+T+LAVLSACGQLGALESGRWVHSYIEN+GIQ
Sbjct: 241 GGYAQNGLPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWVHSYIENEGIQ 300

Query: 301 INVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEM 360
           INVHVGTAL+DMYSKCGSLEDARL+FDGIRDKDVVAWNSMIVGY++HGFSQ+AL+LFEEM
Sbjct: 301 INVHVGTALVDMYSKCGSLEDARLIFDGIRDKDVVAWNSMIVGYALHGFSQHALQLFEEM 360

Query: 361 TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGH 420
           TETGY+PTDITFIG+LSACSHGGLVEEGRSFFRLMRDKY IEPKVEHYGCMVNLLGRAGH
Sbjct: 361 TETGYRPTDITFIGILSACSHGGLVEEGRSFFRLMRDKYGIEPKVEHYGCMVNLLGRAGH 420

Query: 421 LEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 480
           LEEAYELVKNM+IAADPVLWG+LLGSCRLHGNIKLGEEIAEFLVDQ+LANSGTYVLLSN 
Sbjct: 421 LEEAYELVKNMTIAADPVLWGTLLGSCRLHGNIKLGEEIAEFLVDQRLANSGTYVLLSNT 480

Query: 481 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEI 540
           YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEF+AGERKHPKSKEIY+MLNEI
Sbjct: 481 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFVAGERKHPKSKEIYMMLNEI 540

Query: 541 NSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 600
           N WLKARRYTPQ  VVLHDL EEQK+QSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC
Sbjct: 541 NGWLKARRYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 600

Query: 601 LDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
           LDCHAVMKLISEIT RKIVMRDRNRFHHFE+GLCSCGDYW
Sbjct: 601 LDCHAVMKLISEITKRKIVMRDRNRFHHFEDGLCSCGDYW 640

BLAST of ClCG01G017160 vs. NCBI nr
Match: KAG6604154.1 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1184.5 bits (3063), Expect = 0.0e+00
Identity = 581/638 (91.07%), Postives = 606/638 (94.98%), Query Frame = 0

Query: 3   SSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIH 62
           +SSF TAS  SPPPIFTTN SSVL SS STARTSDR QQVE FALLIDKSKSVDRLLQIH
Sbjct: 2   TSSFLTASPASPPPIFTTNCSSVLRSSCSTARTSDRFQQVESFALLIDKSKSVDRLLQIH 61

Query: 63  ASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFD 122
           AS+LRHG YHNPILNFKLQRSYAALGRLDYSVAVF+TSDEPNVFSFSAIIHSHVQC LFD
Sbjct: 62  ASVLRHGLYHNPILNFKLQRSYAALGRLDYSVAVFNTSDEPNVFSFSAIIHSHVQCGLFD 121

Query: 123 RALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYA 182
           RAL YY QML  GVEPNVFTFSSVLKSCSLE GKVLHCQAIKLGFDSDLYVRTGLVDVYA
Sbjct: 122 RALNYYLQMLNGGVEPNVFTFSSVLKSCSLELGKVLHCQAIKLGFDSDLYVRTGLVDVYA 181

Query: 183 RGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGG 242
           RGGDVVCARQLFDKM ERSLVS TAML CY KLGEL EAR LFDGMK+RDVVCWNVMIGG
Sbjct: 182 RGGDVVCARQLFDKMSERSLVSLTAMLTCYVKLGELGEARTLFDGMKERDVVCWNVMIGG 241

Query: 243 YAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQIN 302
           YAQNG+PNESLKLFRRML+AK MPNE+T+LAVLSACGQLGALESGRWVHSYIENKGIQ+N
Sbjct: 242 YAQNGVPNESLKLFRRMLMAKVMPNEVTVLAVLSACGQLGALESGRWVHSYIENKGIQMN 301

Query: 303 VHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTE 362
           VHVGTAL+DMYSKCGSLEDARLVFD IRDKDVVAWNSMIVGY+MHGFSQ+AL+LFEEM+E
Sbjct: 302 VHVGTALVDMYSKCGSLEDARLVFDQIRDKDVVAWNSMIVGYAMHGFSQDALQLFEEMSE 361

Query: 363 TGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLE 422
            GYQPTDITFIG+LSACSHGGLVEEGRS+FRLMRDKY IEPKVEHYGC+VNLLGRAGHLE
Sbjct: 362 IGYQPTDITFIGILSACSHGGLVEEGRSYFRLMRDKYRIEPKVEHYGCIVNLLGRAGHLE 421

Query: 423 EAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYA 482
           EAYELVKNM +AADPV+WG+LLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYA
Sbjct: 422 EAYELVKNMRVAADPVIWGTLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYA 481

Query: 483 ATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS 542
           ATGNWEGV+KMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS
Sbjct: 482 ATGNWEGVSKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS 541

Query: 543 WLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLD 602
           WLKA RYTPQ  VVLHDLGEEQK++SLEVHSEKLA+AFGLISTQPGTTIKIVKNLRVC D
Sbjct: 542 WLKAHRYTPQTDVVLHDLGEEQKERSLEVHSEKLAVAFGLISTQPGTTIKIVKNLRVCSD 601

Query: 603 CHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
           CHAVMKLIS+ITGRKIVMRDRNRFHHFE GLCSCG YW
Sbjct: 602 CHAVMKLISKITGRKIVMRDRNRFHHFEEGLCSCGGYW 639

BLAST of ClCG01G017160 vs. NCBI nr
Match: XP_022950238.1 (pentatricopeptide repeat-containing protein ELI1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1183.7 bits (3061), Expect = 0.0e+00
Identity = 580/638 (90.91%), Postives = 607/638 (95.14%), Query Frame = 0

Query: 3   SSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIH 62
           +SSF TAS  SPPPIFTTN SSVL SS STARTSDR QQVE FA+LIDKSKSVDRLLQIH
Sbjct: 2   TSSFLTASPASPPPIFTTNCSSVLRSSCSTARTSDRFQQVESFAMLIDKSKSVDRLLQIH 61

Query: 63  ASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFD 122
           AS+LRHG YHNPILNFKLQRSYAALGRLDYSVAVF+TSDEPNVFSFSAIIHSHVQC LFD
Sbjct: 62  ASVLRHGLYHNPILNFKLQRSYAALGRLDYSVAVFNTSDEPNVFSFSAIIHSHVQCGLFD 121

Query: 123 RALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYA 182
           RAL YY QML  GVEPNVFTFSSVLKSCSLE GKVLHCQAIKLGFDSDLYVRTGLVDVYA
Sbjct: 122 RALDYYLQMLNGGVEPNVFTFSSVLKSCSLELGKVLHCQAIKLGFDSDLYVRTGLVDVYA 181

Query: 183 RGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGG 242
           RGGDVVCARQLFDKM ERSLVS TAML CY KLGEL EAR LFDGMK+RDVVCWNVMIGG
Sbjct: 182 RGGDVVCARQLFDKMSERSLVSLTAMLTCYVKLGELGEARTLFDGMKERDVVCWNVMIGG 241

Query: 243 YAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQIN 302
           YAQNG+PNESLKLFRRML+AK MPNE+T+LAVLSACGQLGALESGRWVHSYIENKGIQ+N
Sbjct: 242 YAQNGVPNESLKLFRRMLMAKVMPNEVTVLAVLSACGQLGALESGRWVHSYIENKGIQMN 301

Query: 303 VHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTE 362
           VHVGTAL+DMYSKCGSLEDARLVFD IRDKDVVAWNSMIVGY+MHGFSQ+AL+LFEEM+E
Sbjct: 302 VHVGTALVDMYSKCGSLEDARLVFDQIRDKDVVAWNSMIVGYAMHGFSQDALQLFEEMSE 361

Query: 363 TGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLE 422
            GYQPTDITFIG+LSACSHGGLVEEGRS+FRLMRDKY IEPKVEHYGC+VNLLGRAGHLE
Sbjct: 362 IGYQPTDITFIGILSACSHGGLVEEGRSYFRLMRDKYRIEPKVEHYGCIVNLLGRAGHLE 421

Query: 423 EAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYA 482
           EAYELVKNM +AADPV+WG+LLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYA
Sbjct: 422 EAYELVKNMRVAADPVIWGTLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYA 481

Query: 483 ATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS 542
           ATGNWEGV+KMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS
Sbjct: 482 ATGNWEGVSKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS 541

Query: 543 WLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLD 602
           WLKA RYTPQ  VVLHDLGEEQK++SLEVHSEKLA+AFGLISTQPGTTIKIVKNLRVC D
Sbjct: 542 WLKAHRYTPQTDVVLHDLGEEQKERSLEVHSEKLAVAFGLISTQPGTTIKIVKNLRVCSD 601

Query: 603 CHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
           CHAVMKLIS+ITGRKIVMRDRNRFHHFE+GLCSCG YW
Sbjct: 602 CHAVMKLISKITGRKIVMRDRNRFHHFEDGLCSCGGYW 639

BLAST of ClCG01G017160 vs. NCBI nr
Match: KAG7034315.1 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1182.9 bits (3059), Expect = 0.0e+00
Identity = 580/638 (90.91%), Postives = 605/638 (94.83%), Query Frame = 0

Query: 3   SSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIH 62
           +SSF TAS  SPPPIFTTN SSVL SS STARTSDR QQVE FALLIDKSKSVDRLLQIH
Sbjct: 2   TSSFLTASPASPPPIFTTNCSSVLRSSCSTARTSDRFQQVESFALLIDKSKSVDRLLQIH 61

Query: 63  ASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFD 122
           AS+LRHG YHNPILNFKLQRSYAALGRLDYSVAVF+TSDEPNVFSFSAIIHSHVQC LFD
Sbjct: 62  ASVLRHGLYHNPILNFKLQRSYAALGRLDYSVAVFNTSDEPNVFSFSAIIHSHVQCGLFD 121

Query: 123 RALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYA 182
           RAL YY QML  GVEPNVFTFSSVLKSCSLE GKVLHCQAIK GFDSDLYVRTGLVDVYA
Sbjct: 122 RALNYYLQMLNGGVEPNVFTFSSVLKSCSLELGKVLHCQAIKFGFDSDLYVRTGLVDVYA 181

Query: 183 RGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGG 242
           RGGDVVCARQLFDKM ERSLVS TAML CY KLGEL EAR LFDGMK+RDVVCWNVMIGG
Sbjct: 182 RGGDVVCARQLFDKMSERSLVSLTAMLTCYVKLGELGEARTLFDGMKERDVVCWNVMIGG 241

Query: 243 YAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQIN 302
           YAQNG+PNESLKLFRRML+AK MPNE+T+LAVLSACGQLGALESGRWVHSYIENKGIQ+N
Sbjct: 242 YAQNGVPNESLKLFRRMLMAKVMPNEVTVLAVLSACGQLGALESGRWVHSYIENKGIQMN 301

Query: 303 VHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTE 362
           VHVGTAL+DMYSKCGSLEDARLVFD IRDKDVVAWNSMIVGY+MHGFSQ+AL+LFEEM+E
Sbjct: 302 VHVGTALVDMYSKCGSLEDARLVFDQIRDKDVVAWNSMIVGYAMHGFSQDALQLFEEMSE 361

Query: 363 TGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLE 422
            GYQPTDITFIG+LSACSHGGLVEEGRS+FRLMRDKY IEPKVEHYGC+VNLLGRAGHLE
Sbjct: 362 IGYQPTDITFIGILSACSHGGLVEEGRSYFRLMRDKYRIEPKVEHYGCIVNLLGRAGHLE 421

Query: 423 EAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYA 482
           EAYELVKNM +AADPV+WG+LLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYA
Sbjct: 422 EAYELVKNMRVAADPVIWGTLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYA 481

Query: 483 ATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS 542
           ATGNWEGV+KMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS
Sbjct: 482 ATGNWEGVSKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS 541

Query: 543 WLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLD 602
           WLKA RYTPQ  VVLHDLGEEQK++SLEVHSEKLA+AFGLISTQPGTTIKIVKNLRVC D
Sbjct: 542 WLKAHRYTPQTDVVLHDLGEEQKERSLEVHSEKLAVAFGLISTQPGTTIKIVKNLRVCSD 601

Query: 603 CHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
           CHAVMKLIS+ITGRKIVMRDRNRFHHFE GLCSCG YW
Sbjct: 602 CHAVMKLISKITGRKIVMRDRNRFHHFEEGLCSCGGYW 639

BLAST of ClCG01G017160 vs. NCBI nr
Match: XP_023543384.1 (pentatricopeptide repeat-containing protein ELI1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1182.9 bits (3059), Expect = 0.0e+00
Identity = 580/638 (90.91%), Postives = 607/638 (95.14%), Query Frame = 0

Query: 3   SSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIH 62
           +SSF TAS  SPPPIFTTN SSVL SS STARTSDR QQVE FALLIDKSKSVDRLLQIH
Sbjct: 2   TSSFLTASPASPPPIFTTNCSSVLRSSCSTARTSDRFQQVESFALLIDKSKSVDRLLQIH 61

Query: 63  ASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFD 122
           AS+LRHG YHNPILNFKLQRSYAALGRLDYSVAVF+TSDEPNVFSFSAIIHSHVQC LFD
Sbjct: 62  ASVLRHGLYHNPILNFKLQRSYAALGRLDYSVAVFNTSDEPNVFSFSAIIHSHVQCGLFD 121

Query: 123 RALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYA 182
           RAL YY +ML  GVEPNVFTFSSVLKSCSLE GKVLHCQAIK GFDSDLYVRTGLVDVYA
Sbjct: 122 RALNYYLKMLNGGVEPNVFTFSSVLKSCSLELGKVLHCQAIKFGFDSDLYVRTGLVDVYA 181

Query: 183 RGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGG 242
           RGGDVVCARQLFDKM ERSLVS TAML CY KLGEL EARALFDGMK+RDVVCWNVMIGG
Sbjct: 182 RGGDVVCARQLFDKMSERSLVSLTAMLTCYVKLGELGEARALFDGMKERDVVCWNVMIGG 241

Query: 243 YAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQIN 302
           YAQNG+PNESLKLFRRML+AK MPNE+T+LAVLSACGQLGALESGRWVHSYIENKGIQ+N
Sbjct: 242 YAQNGVPNESLKLFRRMLMAKVMPNEVTVLAVLSACGQLGALESGRWVHSYIENKGIQMN 301

Query: 303 VHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTE 362
           VHVGTAL+DMYSKCGSLEDARLVFD IRDKDVVAWNSMIVGY+MHGFSQ+ALKLFEEM+E
Sbjct: 302 VHVGTALVDMYSKCGSLEDARLVFDQIRDKDVVAWNSMIVGYAMHGFSQHALKLFEEMSE 361

Query: 363 TGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLE 422
            GYQPTDITFIG+LSACSHGGLVEEGRS+FRLMRDKY IEPKVEHYGC+VNLLGRAGHLE
Sbjct: 362 IGYQPTDITFIGILSACSHGGLVEEGRSYFRLMRDKYRIEPKVEHYGCIVNLLGRAGHLE 421

Query: 423 EAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYA 482
           EAYELVKNM +AADPV+WG+LLGSCRLHG+IKLGEEIAEFLVDQKLANSGTYVLLSNIYA
Sbjct: 422 EAYELVKNMRVAADPVIWGTLLGSCRLHGDIKLGEEIAEFLVDQKLANSGTYVLLSNIYA 481

Query: 483 ATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS 542
           ATGNWEGV+KMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS
Sbjct: 482 ATGNWEGVSKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS 541

Query: 543 WLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLD 602
           WLKA RYTPQ  VVLHDLGEEQK++SLEVHSEKLA+AFGLISTQPGTTIKIVKNLRVC D
Sbjct: 542 WLKAHRYTPQTDVVLHDLGEEQKERSLEVHSEKLAVAFGLISTQPGTTIKIVKNLRVCSD 601

Query: 603 CHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
           CHAVMKLIS+ITGRKIVMRDRNRFHHFE+GLCSCG YW
Sbjct: 602 CHAVMKLISKITGRKIVMRDRNRFHHFEDGLCSCGGYW 639

BLAST of ClCG01G017160 vs. ExPASy Swiss-Prot
Match: Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 761.1 bits (1964), Expect = 9.8e-219
Identity = 371/630 (58.89%), Postives = 482/630 (76.51%), Query Frame = 0

Query: 16  PIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIHASLLRHG---HYH 75
           P+  T+      S+++TAR   R    E+ A+LIDKS+SVD +LQIHA++LRH    H  
Sbjct: 5   PLLATSLPQNQLSTTATARF--RLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPR 64

Query: 76  NPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALGYYSQML 135
            P+LN KL R+YA+ G++ +S+A+F  + +P++F F+A I++     L D+A   Y Q+L
Sbjct: 65  YPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLL 124

Query: 136 TRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQ 195
           +  + PN FTFSS+LKSCS + GK++H   +K G   D YV TGLVDVYA+GGDVV A++
Sbjct: 125 SSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQK 184

Query: 196 LFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGGYAQNGLPNES 255
           +FD+MPERSLVS TAM+ CYAK G ++ ARALFD M +RD+V WNVMI GYAQ+G PN++
Sbjct: 185 VFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDA 244

Query: 256 LKLFRRMLV-AKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQINVHVGTALID 315
           L LF+++L   K  P+EIT++A LSAC Q+GALE+GRW+H ++++  I++NV V T LID
Sbjct: 245 LMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLID 304

Query: 316 MYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTE-TGYQPTDI 375
           MYSKCGSLE+A LVF+    KD+VAWN+MI GY+MHG+SQ+AL+LF EM   TG QPTDI
Sbjct: 305 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI 364

Query: 376 TFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLEEAYELVKN 435
           TFIG L AC+H GLV EG   F  M  +Y I+PK+EHYGC+V+LLGRAG L+ AYE +KN
Sbjct: 365 TFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN 424

Query: 436 MSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYAATGNWEGV 495
           M++ AD VLW S+LGSC+LHG+  LG+EIAE+L+   + NSG YVLLSNIYA+ G++EGV
Sbjct: 425 MNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGV 484

Query: 496 AKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINSWLKARRYT 555
           AK+R LMKE GI KEPG S+IE+ NKVHEF AG+R+H KSKEIY ML +I+  +K+  Y 
Sbjct: 485 AKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYV 544

Query: 556 PQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLDCHAVMKLI 615
           P    VL DL E +K+QSL+VHSE+LAIA+GLIST+PG+ +KI KNLRVC DCH V KLI
Sbjct: 545 PNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLI 604

Query: 616 SEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
           S+ITGRKIVMRDRNRFHHF +G CSCGD+W
Sbjct: 605 SKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632

BLAST of ClCG01G017160 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 2.4e-148
Identity = 279/640 (43.59%), Postives = 401/640 (62.66%), Query Frame = 0

Query: 27  PSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIHASLLRHGHYHNPILNFKLQRSYAA 86
           P+SS  +  S    Q       I+  +++  L QIHA  ++ G   + +   ++ R  A 
Sbjct: 15  PASSPASHPSSLFPQ-------INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCAT 74

Query: 87  LG----RLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRAL----GYYSQMLTRGVEP 146
                  LDY+  +F+   + N FS++ II    +    D+AL     +Y  M    VEP
Sbjct: 75  SDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESD-EDKALIAITLFYEMMSDEFVEP 134

Query: 147 NVFTFSSVLKSCS----LEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQLF 206
           N FTF SVLK+C+    ++ GK +H  A+K GF  D +V + LV +Y   G +  AR LF
Sbjct: 135 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF 194

Query: 207 DK-MPERSLVSQT-------------AMLACYAKLGELDEARALFDGMKQRDVVCWNVMI 266
            K + E+ +V  T              M+  Y +LG+   AR LFD M+QR VV WN MI
Sbjct: 195 YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMI 254

Query: 267 GGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQ 326
            GY+ NG   +++++FR M      PN +T+++VL A  +LG+LE G W+H Y E+ GI+
Sbjct: 255 SGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIR 314

Query: 327 INVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEM 386
           I+  +G+ALIDMYSKCG +E A  VF+ +  ++V+ W++MI G+++HG + +A+  F +M
Sbjct: 315 IDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM 374

Query: 387 TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGH 446
            + G +P+D+ +I LL+ACSHGGLVEEGR +F  M     +EP++EHYGCMV+LLGR+G 
Sbjct: 375 RQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGL 434

Query: 447 LEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 506
           L+EA E + NM I  D V+W +LLG+CR+ GN+++G+ +A  L+D    +SG YV LSN+
Sbjct: 435 LDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNM 494

Query: 507 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEI 566
           YA+ GNW  V++MR  MKE  I K+PGCS I+++  +HEF+  +  HPK+KEI  ML EI
Sbjct: 495 YASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEI 554

Query: 567 NSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 626
           +  L+   Y P    VL +L EE K+  L  HSEK+A AFGLIST PG  I+IVKNLR+C
Sbjct: 555 SDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRIC 614

Query: 627 LDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
            DCH+ +KLIS++  RKI +RDR RFHHF++G CSC DYW
Sbjct: 615 EDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

BLAST of ClCG01G017160 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 3.4e-147
Identity = 286/728 (39.29%), Postives = 405/728 (55.63%), Query Frame = 0

Query: 26  LPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIHASLLRHGHYHNPILNFKLQR--S 85
           LPSSS     S R+        L+   K++  L  IHA +++ G  HN   N+ L +   
Sbjct: 20  LPSSSDPPYDSIRNHP---SLSLLHNCKTLQSLRIIHAQMIKIG-LHN--TNYALSKLIE 79

Query: 86  YAALG----RLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPN 145
           +  L      L Y+++VF T  EPN+  ++ +   H        AL  Y  M++ G+ PN
Sbjct: 80  FCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 139

Query: 146 VFTFSSVLKSC----SLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQLFD 205
            +TF  VLKSC    + + G+ +H   +KLG D DLYV T L+ +Y + G +  A ++FD
Sbjct: 140 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 199

Query: 206 KMPERSLVSQTAML---------------------------------------------- 265
           K P R +VS TA++                                              
Sbjct: 200 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 259

Query: 266 ---------------------AC----------------------------------YAK 325
                                AC                                  Y+K
Sbjct: 260 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 319

Query: 326 LGELDEARALFDGMKQRDVVCWNVMIGGYAQNGLPNESLKLFRRMLVAKAMPNEITILAV 385
            GEL+ A  LF+ +  +DV+ WN +IGGY    L  E+L LF+ ML +   PN++T+L++
Sbjct: 320 CGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 379

Query: 386 LSACGQLGALESGRWVHSYIEN--KGIQINVHVGTALIDMYSKCGSLEDARLVFDGIRDK 445
           L AC  LGA++ GRW+H YI+   KG+     + T+LIDMY+KCG +E A  VF+ I  K
Sbjct: 380 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 439

Query: 446 DVVAWNSMIVGYSMHGFSQNALKLFEEMTETGYQPTDITFIGLLSACSHGGLVEEGRSFF 505
            + +WN+MI G++MHG +  +  LF  M + G QP DITF+GLLSACSH G+++ GR  F
Sbjct: 440 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIF 499

Query: 506 RLMRDKYLIEPKVEHYGCMVNLLGRAGHLEEAYELVKNMSIAADPVLWGSLLGSCRLHGN 565
           R M   Y + PK+EHYGCM++LLG +G  +EA E++  M +  D V+W SLL +C++HGN
Sbjct: 500 RTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 559

Query: 566 IKLGEEIAEFLVDQKLANSGTYVLLSNIYAATGNWEGVAKMRTLMKEHGIEKEPGCSSIE 625
           ++LGE  AE L+  +  N G+YVLLSNIYA+ G W  VAK R L+ + G++K PGCSSIE
Sbjct: 560 VELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 619

Query: 626 VNNKVHEFLAGERKHPKSKEIYVMLNEINSWLKARRYTPQIGVVLHDLGEEQKKQSLEVH 641
           +++ VHEF+ G++ HP+++EIY ML E+   L+   + P    VL ++ EE K+ +L  H
Sbjct: 620 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHH 679

BLAST of ClCG01G017160 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.0e-143
Identity = 247/563 (43.87%), Postives = 368/563 (65.36%), Query Frame = 0

Query: 84  YAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTF 143
           Y + G LD +  VF T  E +V S++++I+  VQ    D+AL  + +M +  V+ +  T 
Sbjct: 176 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235

Query: 144 SSVLKSC----SLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQLFDKMPE 203
             VL +C    +LE G+ +     +   + +L +   ++D+Y + G +  A++LFD M E
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295

Query: 204 RSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGGYAQNGLPNESLKLFRRM 263
           +  V+ T ML  YA   + + AR + + M Q+D+V WN +I  Y QNG PNE+L +F  +
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355

Query: 264 LVAKAMP-NEITILAVLSACGQLGALESGRWVHSYIENKGIQINVHVGTALIDMYSKCGS 323
            + K M  N+IT+++ LSAC Q+GALE GRW+HSYI+  GI++N HV +ALI MYSKCG 
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGD 415

Query: 324 LEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTETGYQPTDITFIGLLSA 383
           LE +R VF+ +  +DV  W++MI G +MHG    A+ +F +M E   +P  +TF  +  A
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475

Query: 384 CSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLEEAYELVKNMSIAADPV 443
           CSH GLV+E  S F  M   Y I P+ +HY C+V++LGR+G+LE+A + ++ M I     
Sbjct: 476 CSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS 535

Query: 444 LWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYAATGNWEGVAKMRTLMK 503
           +WG+LLG+C++H N+ L E     L++ +  N G +VLLSNIYA  G WE V+++R  M+
Sbjct: 536 VWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMR 595

Query: 504 EHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINSWLKARRYTPQIGVVLH 563
             G++KEPGCSSIE++  +HEFL+G+  HP S+++Y  L+E+   LK+  Y P+I  VL 
Sbjct: 596 VTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQ 655

Query: 564 DLGEEQ-KKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLDCHAVMKLISEITGRK 623
            + EE+ K+QSL +HSEKLAI +GLIST+    I+++KNLRVC DCH+V KLIS++  R+
Sbjct: 656 IIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDRE 715

Query: 624 IVMRDRNRFHHFENGLCSCGDYW 641
           I++RDR RFHHF NG CSC D+W
Sbjct: 716 IIVRDRYRFHHFRNGQCSCNDFW 738

BLAST of ClCG01G017160 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.0e-143
Identity = 262/672 (38.99%), Postives = 394/672 (58.63%), Query Frame = 0

Query: 45  FALLIDKSKSVDRLLQIHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPN 104
           +A LID +    +L QIHA LL  G   +  L  KL  + ++ G + ++  VFD    P 
Sbjct: 24  YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 83

Query: 105 VFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCS----LEPGKVLHC 164
           +F ++AII  + +   F  AL  YS M    V P+ FTF  +LK+CS    L+ G+ +H 
Sbjct: 84  IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143

Query: 165 QAIKLGFDSDLYVRTGLVDVYARGGDVVCARQLFD--KMPERSLVSQTAMLAC------- 224
           Q  +LGFD+D++V+ GL+ +YA+   +  AR +F+   +PER++VS TA+++        
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203

Query: 225 ------------------------------------------------------------ 284
                                                                       
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263

Query: 285 ---YAKLGELDEARALFDGMKQRDVVCWNVMIGGYAQNGLPNESLKLFRRMLVAKAMPNE 344
              YAK G++  A+ LFD MK  +++ WN MI GYA+NG   E++ +F  M+     P+ 
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDT 323

Query: 345 ITILAVLSACGQLGALESGRWVHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDG 404
           I+I + +SAC Q+G+LE  R ++ Y+     + +V + +ALIDM++KCGS+E ARLVFD 
Sbjct: 324 ISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR 383

Query: 405 IRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTETGYQPTDITFIGLLSACSHGGLVEEG 464
             D+DVV W++MIVGY +HG ++ A+ L+  M   G  P D+TF+GLL AC+H G+V EG
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443

Query: 465 RSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLEEAYELVKNMSIAADPVLWGSLLGSCR 524
             FF  M D + I P+ +HY C+++LLGRAGHL++AYE++K M +     +WG+LL +C+
Sbjct: 444 WWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK 503

Query: 525 LHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYAATGNWEGVAKMRTLMKEHGIEKEPGC 584
            H +++LGE  A+ L     +N+G YV LSN+YAA   W+ VA++R  MKE G+ K+ GC
Sbjct: 504 KHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGC 563

Query: 585 SSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINSWLKARRYTPQIGVVLHDLGEEQKKQS 641
           S +EV  ++  F  G++ HP+ +EI   +  I S LK   +       LHDL +E+ +++
Sbjct: 564 SWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEET 623

BLAST of ClCG01G017160 vs. ExPASy TrEMBL
Match: A0A6J1GED1 (pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453386 PE=3 SV=1)

HSP 1 Score: 1183.7 bits (3061), Expect = 0.0e+00
Identity = 580/638 (90.91%), Postives = 607/638 (95.14%), Query Frame = 0

Query: 3   SSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIH 62
           +SSF TAS  SPPPIFTTN SSVL SS STARTSDR QQVE FA+LIDKSKSVDRLLQIH
Sbjct: 2   TSSFLTASPASPPPIFTTNCSSVLRSSCSTARTSDRFQQVESFAMLIDKSKSVDRLLQIH 61

Query: 63  ASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFD 122
           AS+LRHG YHNPILNFKLQRSYAALGRLDYSVAVF+TSDEPNVFSFSAIIHSHVQC LFD
Sbjct: 62  ASVLRHGLYHNPILNFKLQRSYAALGRLDYSVAVFNTSDEPNVFSFSAIIHSHVQCGLFD 121

Query: 123 RALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYA 182
           RAL YY QML  GVEPNVFTFSSVLKSCSLE GKVLHCQAIKLGFDSDLYVRTGLVDVYA
Sbjct: 122 RALDYYLQMLNGGVEPNVFTFSSVLKSCSLELGKVLHCQAIKLGFDSDLYVRTGLVDVYA 181

Query: 183 RGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGG 242
           RGGDVVCARQLFDKM ERSLVS TAML CY KLGEL EAR LFDGMK+RDVVCWNVMIGG
Sbjct: 182 RGGDVVCARQLFDKMSERSLVSLTAMLTCYVKLGELGEARTLFDGMKERDVVCWNVMIGG 241

Query: 243 YAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQIN 302
           YAQNG+PNESLKLFRRML+AK MPNE+T+LAVLSACGQLGALESGRWVHSYIENKGIQ+N
Sbjct: 242 YAQNGVPNESLKLFRRMLMAKVMPNEVTVLAVLSACGQLGALESGRWVHSYIENKGIQMN 301

Query: 303 VHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTE 362
           VHVGTAL+DMYSKCGSLEDARLVFD IRDKDVVAWNSMIVGY+MHGFSQ+AL+LFEEM+E
Sbjct: 302 VHVGTALVDMYSKCGSLEDARLVFDQIRDKDVVAWNSMIVGYAMHGFSQDALQLFEEMSE 361

Query: 363 TGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLE 422
            GYQPTDITFIG+LSACSHGGLVEEGRS+FRLMRDKY IEPKVEHYGC+VNLLGRAGHLE
Sbjct: 362 IGYQPTDITFIGILSACSHGGLVEEGRSYFRLMRDKYRIEPKVEHYGCIVNLLGRAGHLE 421

Query: 423 EAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYA 482
           EAYELVKNM +AADPV+WG+LLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYA
Sbjct: 422 EAYELVKNMRVAADPVIWGTLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYA 481

Query: 483 ATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS 542
           ATGNWEGV+KMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS
Sbjct: 482 ATGNWEGVSKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS 541

Query: 543 WLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLD 602
           WLKA RYTPQ  VVLHDLGEEQK++SLEVHSEKLA+AFGLISTQPGTTIKIVKNLRVC D
Sbjct: 542 WLKAHRYTPQTDVVLHDLGEEQKERSLEVHSEKLAVAFGLISTQPGTTIKIVKNLRVCSD 601

Query: 603 CHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
           CHAVMKLIS+ITGRKIVMRDRNRFHHFE+GLCSCG YW
Sbjct: 602 CHAVMKLISKITGRKIVMRDRNRFHHFEDGLCSCGGYW 639

BLAST of ClCG01G017160 vs. ExPASy TrEMBL
Match: A0A6J1IMD2 (pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111477796 PE=3 SV=1)

HSP 1 Score: 1177.5 bits (3045), Expect = 0.0e+00
Identity = 577/638 (90.44%), Postives = 605/638 (94.83%), Query Frame = 0

Query: 3   SSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIH 62
           +SSF TAS  SPPPIFTTN SSVL +S STARTSDR QQVE FALLIDKSKSVDRLLQIH
Sbjct: 8   TSSFLTASPASPPPIFTTNCSSVLRTSCSTARTSDRFQQVESFALLIDKSKSVDRLLQIH 67

Query: 63  ASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFD 122
           AS+LRHG YHNPILNFKLQRSYAALGRLDYSVAVF+TSDEPNVFSFSAIIHSHVQC LFD
Sbjct: 68  ASVLRHGLYHNPILNFKLQRSYAALGRLDYSVAVFNTSDEPNVFSFSAIIHSHVQCGLFD 127

Query: 123 RALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYA 182
           RAL YY QML  GVEPNVFTFSSVLKSCSLE GKVLHCQA+K GFDSDLYVRTGLVDVYA
Sbjct: 128 RALNYYLQMLNGGVEPNVFTFSSVLKSCSLELGKVLHCQAMKFGFDSDLYVRTGLVDVYA 187

Query: 183 RGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGG 242
           RGGDVVCARQLFDKM ERSLVS TAML CY KLGEL EARALFDGMK+RDVVCWNVMIGG
Sbjct: 188 RGGDVVCARQLFDKMSERSLVSLTAMLTCYVKLGELGEARALFDGMKERDVVCWNVMIGG 247

Query: 243 YAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQIN 302
           YAQNG+PNESLKLFRRML+ K MPNE+T+LAVLSACGQLGALESGRWVHSYIENKGIQ+N
Sbjct: 248 YAQNGVPNESLKLFRRMLMVKVMPNEVTVLAVLSACGQLGALESGRWVHSYIENKGIQMN 307

Query: 303 VHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTE 362
           VHVGTAL+DMYSKCGSLEDARLVFD IRDKDVVAWNSMIVGY+MHGFSQ+AL+LFE+M+E
Sbjct: 308 VHVGTALVDMYSKCGSLEDARLVFDQIRDKDVVAWNSMIVGYAMHGFSQHALQLFEQMSE 367

Query: 363 TGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLE 422
            GYQPTDITFIG+LSACSHGGLVEEGRS+FRLMRDKY IEPKVEHYGCMVNLLGRAGHLE
Sbjct: 368 IGYQPTDITFIGILSACSHGGLVEEGRSYFRLMRDKYRIEPKVEHYGCMVNLLGRAGHLE 427

Query: 423 EAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYA 482
           EAYELVKNM +AADPV+WG+LLGSCRLHG+IKLGEEIAEFLVDQKLANSGTYVLLSNIYA
Sbjct: 428 EAYELVKNMRVAADPVIWGTLLGSCRLHGDIKLGEEIAEFLVDQKLANSGTYVLLSNIYA 487

Query: 483 ATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS 542
           ATGNWEGV+KMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS
Sbjct: 488 ATGNWEGVSKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINS 547

Query: 543 WLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLD 602
           WLKA RYTPQ  VVLHDLGEEQK++SLEVHSEKLA AFGLISTQPGTTIKIVKNLRVC D
Sbjct: 548 WLKAHRYTPQTDVVLHDLGEEQKERSLEVHSEKLAAAFGLISTQPGTTIKIVKNLRVCPD 607

Query: 603 CHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
           CHAVMKLIS+ITGRKIVMRDRNRFHHFE+GLCSCG YW
Sbjct: 608 CHAVMKLISKITGRKIVMRDRNRFHHFEDGLCSCGGYW 645

BLAST of ClCG01G017160 vs. ExPASy TrEMBL
Match: A0A6J1BWF5 (pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005343 PE=3 SV=1)

HSP 1 Score: 1166.8 bits (3017), Expect = 0.0e+00
Identity = 565/640 (88.28%), Postives = 603/640 (94.22%), Query Frame = 0

Query: 1   MSSSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQ 60
           MSSSSFFTA  PSPPP+ TTNRSS+LPSS STA TSDRSQQVERFA LIDKS+SV RLLQ
Sbjct: 1   MSSSSFFTAPPPSPPPLVTTNRSSLLPSSPSTATTSDRSQQVERFASLIDKSRSVIRLLQ 60

Query: 61  IHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRL 120
           IHASLLR G YH+PILNFKLQRSYA +GRLDYSVAVF+TSD+PNVFS+S+IIHSH QC L
Sbjct: 61  IHASLLRQGLYHHPILNFKLQRSYATVGRLDYSVAVFNTSDDPNVFSYSSIIHSHAQCGL 120

Query: 121 FDRALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDV 180
           FD+AL +YSQMLTRGVEPNVFTFSSVLKSCSLEPGK LHCQAIKLGFDSDLYVRTGLVDV
Sbjct: 121 FDQALDFYSQMLTRGVEPNVFTFSSVLKSCSLEPGKALHCQAIKLGFDSDLYVRTGLVDV 180

Query: 181 YARGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMI 240
           YARGG+VVCARQLFDKMPERSLVS TAML CY KLGELDEARALFDGMK+RDVVCWNVMI
Sbjct: 181 YARGGEVVCARQLFDKMPERSLVSLTAMLTCYTKLGELDEARALFDGMKERDVVCWNVMI 240

Query: 241 GGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQ 300
           GGYAQNG+PNESLKLFRRMLVAK  PNE+T+LAVLSACGQLGALESGRWVHSYIENKGI+
Sbjct: 241 GGYAQNGVPNESLKLFRRMLVAKVKPNEVTVLAVLSACGQLGALESGRWVHSYIENKGIE 300

Query: 301 INVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEM 360
           +NVHVGTAL+DMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGY+MHGF Q+ L+LFEEM
Sbjct: 301 MNVHVGTALVDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYAMHGFFQHVLQLFEEM 360

Query: 361 TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGH 420
           T  GYQPTDITFIG+LSACSHGG+VEEGR F  LMR +Y IEPKVEHYGCMVNLLG AGH
Sbjct: 361 TAIGYQPTDITFIGILSACSHGGMVEEGRRFLSLMRKEYGIEPKVEHYGCMVNLLGHAGH 420

Query: 421 LEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 480
           LEEAY LVKNM++AADPVLWG+LLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI
Sbjct: 421 LEEAYNLVKNMTVAADPVLWGTLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 480

Query: 481 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEI 540
           YAATGNWEGVAK+RTLMKEHGIEKEPGCSSIEVNNKVHEF+AGERKHPK+KEIY+MLNEI
Sbjct: 481 YAATGNWEGVAKIRTLMKEHGIEKEPGCSSIEVNNKVHEFVAGERKHPKTKEIYMMLNEI 540

Query: 541 NSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 600
           N WL+A  Y PQ  +VLHDLGEEQK+QSLEVHSEKLAIAFGLISTQPGTT+KIVKNLRVC
Sbjct: 541 NRWLRAHGYAPQTDIVLHDLGEEQKEQSLEVHSEKLAIAFGLISTQPGTTVKIVKNLRVC 600

Query: 601 LDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
            DCHAVMKLIS+ITGRKIVMRDRNRFHHFE+GLCSCGDYW
Sbjct: 601 SDCHAVMKLISKITGRKIVMRDRNRFHHFEDGLCSCGDYW 640

BLAST of ClCG01G017160 vs. ExPASy TrEMBL
Match: A0A1S3B0U7 (pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484813 PE=3 SV=1)

HSP 1 Score: 1164.4 bits (3011), Expect = 0.0e+00
Identity = 574/640 (89.69%), Postives = 603/640 (94.22%), Query Frame = 0

Query: 1   MSSSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQ 60
           MSSSSFFTAS PSPP IFTTNRSSV PSSSSTA+TS R QQVERFALLIDKSKSV  LLQ
Sbjct: 6   MSSSSFFTASPPSPPSIFTTNRSSVSPSSSSTAKTSGRFQQVERFALLIDKSKSVAHLLQ 65

Query: 61  IHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRL 120
           IHASLLRHG YHNPILNFKLQRSYAALGRLD SV VF+T DEPNVFSFSAIIHSHVQ RL
Sbjct: 66  IHASLLRHGLYHNPILNFKLQRSYAALGRLDCSVVVFNTFDEPNVFSFSAIIHSHVQSRL 125

Query: 121 FDRALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDV 180
           FDRA GYYSQML+RGVEPN FTFSSVLKSCSLE GKVLHCQAIKLG  SDLYVRTGLVDV
Sbjct: 126 FDRAFGYYSQMLSRGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDV 185

Query: 181 YARGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMI 240
           YARGGDVVCARQLFDKMPERSLVS T ML CY+K+GELDEAR+LF+GMK+RDVVCWNVMI
Sbjct: 186 YARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDEARSLFEGMKERDVVCWNVMI 245

Query: 241 GGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQ 300
           GGYAQNG+PNESLKLFRRMLV+KA+PNE+T+LAVLSACGQLGALESGRWVHSYIENK IQ
Sbjct: 246 GGYAQNGVPNESLKLFRRMLVSKAIPNEVTVLAVLSACGQLGALESGRWVHSYIENKSIQ 305

Query: 301 INVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEM 360
           INVHVGTAL+DMYSKCGSLEDARLVFD IRDKDVVAWNSMIVGY+MHGFSQ+AL+LF EM
Sbjct: 306 INVHVGTALVDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFGEM 365

Query: 361 TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGH 420
           TETG+QPTDITFIG+LSAC+HGGLVEEGRS FRLMRDKY IEPK+EHYGCMVNLLGRAGH
Sbjct: 366 TETGHQPTDITFIGILSACAHGGLVEEGRSLFRLMRDKYGIEPKIEHYGCMVNLLGRAGH 425

Query: 421 LEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 480
           LEEAY LVKNM+IAADPVLWG+LLGSCRLH NIKLGEEIAEFLVDQKLA+SGTYVLLSN+
Sbjct: 426 LEEAYALVKNMTIAADPVLWGTLLGSCRLHVNIKLGEEIAEFLVDQKLAHSGTYVLLSNM 485

Query: 481 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEI 540
           YAATGNWEGVAKMRTLMKEHGIEKE GCSSIEVNNKVHEF+AGERKHPKSKEIYVM NEI
Sbjct: 486 YAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVNNKVHEFVAGERKHPKSKEIYVMSNEI 545

Query: 541 NSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 600
           NSWLKAR YT Q  VVLHDL EEQK+Q LEVHSEKLAIAFGLIST+PGTTIKIVKNLRVC
Sbjct: 546 NSWLKARGYTSQTDVVLHDLREEQKEQLLEVHSEKLAIAFGLISTKPGTTIKIVKNLRVC 605

Query: 601 LDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
            DCH VMKLISEITGRKIVMRDRNRFHHFE+GLCSCGDYW
Sbjct: 606 SDCHTVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645

BLAST of ClCG01G017160 vs. ExPASy TrEMBL
Match: A0A0A0KGF1 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G492280 PE=3 SV=1)

HSP 1 Score: 1163.7 bits (3009), Expect = 0.0e+00
Identity = 572/640 (89.38%), Postives = 605/640 (94.53%), Query Frame = 0

Query: 1   MSSSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQ 60
           MSSSS FTAS PSPP IFTTNRSSVLPSSSSTARTSDR Q+VERFA LIDKSKSV  LLQ
Sbjct: 6   MSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSVAHLLQ 65

Query: 61  IHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRL 120
           IHASLLR G YHNPILNFKLQRSYAALGRLD SV VF+T DEPNVFSFSAIIHSHVQ RL
Sbjct: 66  IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRL 125

Query: 121 FDRALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDV 180
           FDRA GYYSQML+ GVEPN FTFSSVLKSCSLE GKVLHCQAIKLG  SDLYVRTGLVDV
Sbjct: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDV 185

Query: 181 YARGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMI 240
           YARGGDVVCARQLFDKMPERSLVS T ML CY+K+GELD+AR+LF+GMK+RDVVCWNVMI
Sbjct: 186 YARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMI 245

Query: 241 GGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQ 300
           GGYAQ+G+PNESLKLFRRMLVAKA+PNE+T+LAVLSACGQLGALESGRW+HSYIENKGIQ
Sbjct: 246 GGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQ 305

Query: 301 INVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEM 360
           INVHVGTALIDMYSKCGSLEDARLVFD IRDKDVVAWNSMIVGY+MHGFSQ+AL+LFEEM
Sbjct: 306 INVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEM 365

Query: 361 TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGH 420
           TETG++PTDITFIG+LSAC HGGLVEEGRSFFRLMRDKY IEPK+EHYGCMVNLLGRAGH
Sbjct: 366 TETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGH 425

Query: 421 LEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 480
           LEEAY LVKNM+IAADPVLWG+LLG CRLH NIKLGEEIA+FLVDQKLANSGTYVLLSN+
Sbjct: 426 LEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNM 485

Query: 481 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEI 540
           YAATGNWEGVAKMRTLMKEHGIEKE GCSSIEV+NKVHEF+AGERKHPKSKEIYVMLNEI
Sbjct: 486 YAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEI 545

Query: 541 NSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 600
           NSWLKAR YTPQ  VVLHDL EEQK+QSLEVHSEKLAIAFGLIST+PGTT+KIVKNLRVC
Sbjct: 546 NSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVC 605

Query: 601 LDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
            DCH VMK+ISEITGRKIVMRDRNRFHHFE+GLCSCGDYW
Sbjct: 606 SDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645

BLAST of ClCG01G017160 vs. TAIR 10
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 761.1 bits (1964), Expect = 6.9e-220
Identity = 371/630 (58.89%), Postives = 482/630 (76.51%), Query Frame = 0

Query: 16  PIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIHASLLRHG---HYH 75
           P+  T+      S+++TAR   R    E+ A+LIDKS+SVD +LQIHA++LRH    H  
Sbjct: 5   PLLATSLPQNQLSTTATARF--RLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPR 64

Query: 76  NPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALGYYSQML 135
            P+LN KL R+YA+ G++ +S+A+F  + +P++F F+A I++     L D+A   Y Q+L
Sbjct: 65  YPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLL 124

Query: 136 TRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQ 195
           +  + PN FTFSS+LKSCS + GK++H   +K G   D YV TGLVDVYA+GGDVV A++
Sbjct: 125 SSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQK 184

Query: 196 LFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGGYAQNGLPNES 255
           +FD+MPERSLVS TAM+ CYAK G ++ ARALFD M +RD+V WNVMI GYAQ+G PN++
Sbjct: 185 VFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDA 244

Query: 256 LKLFRRMLV-AKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQINVHVGTALID 315
           L LF+++L   K  P+EIT++A LSAC Q+GALE+GRW+H ++++  I++NV V T LID
Sbjct: 245 LMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLID 304

Query: 316 MYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTE-TGYQPTDI 375
           MYSKCGSLE+A LVF+    KD+VAWN+MI GY+MHG+SQ+AL+LF EM   TG QPTDI
Sbjct: 305 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI 364

Query: 376 TFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLEEAYELVKN 435
           TFIG L AC+H GLV EG   F  M  +Y I+PK+EHYGC+V+LLGRAG L+ AYE +KN
Sbjct: 365 TFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN 424

Query: 436 MSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYAATGNWEGV 495
           M++ AD VLW S+LGSC+LHG+  LG+EIAE+L+   + NSG YVLLSNIYA+ G++EGV
Sbjct: 425 MNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGV 484

Query: 496 AKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINSWLKARRYT 555
           AK+R LMKE GI KEPG S+IE+ NKVHEF AG+R+H KSKEIY ML +I+  +K+  Y 
Sbjct: 485 AKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYV 544

Query: 556 PQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLDCHAVMKLI 615
           P    VL DL E +K+QSL+VHSE+LAIA+GLIST+PG+ +KI KNLRVC DCH V KLI
Sbjct: 545 PNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLI 604

Query: 616 SEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
           S+ITGRKIVMRDRNRFHHF +G CSCGD+W
Sbjct: 605 SKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632

BLAST of ClCG01G017160 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 527.3 bits (1357), Expect = 1.7e-149
Identity = 279/640 (43.59%), Postives = 401/640 (62.66%), Query Frame = 0

Query: 27  PSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIHASLLRHGHYHNPILNFKLQRSYAA 86
           P+SS  +  S    Q       I+  +++  L QIHA  ++ G   + +   ++ R  A 
Sbjct: 15  PASSPASHPSSLFPQ-------INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCAT 74

Query: 87  LG----RLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRAL----GYYSQMLTRGVEP 146
                  LDY+  +F+   + N FS++ II    +    D+AL     +Y  M    VEP
Sbjct: 75  SDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESD-EDKALIAITLFYEMMSDEFVEP 134

Query: 147 NVFTFSSVLKSCS----LEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQLF 206
           N FTF SVLK+C+    ++ GK +H  A+K GF  D +V + LV +Y   G +  AR LF
Sbjct: 135 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF 194

Query: 207 DK-MPERSLVSQT-------------AMLACYAKLGELDEARALFDGMKQRDVVCWNVMI 266
            K + E+ +V  T              M+  Y +LG+   AR LFD M+QR VV WN MI
Sbjct: 195 YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMI 254

Query: 267 GGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQ 326
            GY+ NG   +++++FR M      PN +T+++VL A  +LG+LE G W+H Y E+ GI+
Sbjct: 255 SGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIR 314

Query: 327 INVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEM 386
           I+  +G+ALIDMYSKCG +E A  VF+ +  ++V+ W++MI G+++HG + +A+  F +M
Sbjct: 315 IDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM 374

Query: 387 TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGH 446
            + G +P+D+ +I LL+ACSHGGLVEEGR +F  M     +EP++EHYGCMV+LLGR+G 
Sbjct: 375 RQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGL 434

Query: 447 LEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 506
           L+EA E + NM I  D V+W +LLG+CR+ GN+++G+ +A  L+D    +SG YV LSN+
Sbjct: 435 LDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNM 494

Query: 507 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEI 566
           YA+ GNW  V++MR  MKE  I K+PGCS I+++  +HEF+  +  HPK+KEI  ML EI
Sbjct: 495 YASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEI 554

Query: 567 NSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 626
           +  L+   Y P    VL +L EE K+  L  HSEK+A AFGLIST PG  I+IVKNLR+C
Sbjct: 555 SDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRIC 614

Query: 627 LDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
            DCH+ +KLIS++  RKI +RDR RFHHF++G CSC DYW
Sbjct: 615 EDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

BLAST of ClCG01G017160 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 523.5 bits (1347), Expect = 2.4e-148
Identity = 286/728 (39.29%), Postives = 405/728 (55.63%), Query Frame = 0

Query: 26  LPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIHASLLRHGHYHNPILNFKLQR--S 85
           LPSSS     S R+        L+   K++  L  IHA +++ G  HN   N+ L +   
Sbjct: 20  LPSSSDPPYDSIRNHP---SLSLLHNCKTLQSLRIIHAQMIKIG-LHN--TNYALSKLIE 79

Query: 86  YAALG----RLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPN 145
           +  L      L Y+++VF T  EPN+  ++ +   H        AL  Y  M++ G+ PN
Sbjct: 80  FCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 139

Query: 146 VFTFSSVLKSC----SLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQLFD 205
            +TF  VLKSC    + + G+ +H   +KLG D DLYV T L+ +Y + G +  A ++FD
Sbjct: 140 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 199

Query: 206 KMPERSLVSQTAML---------------------------------------------- 265
           K P R +VS TA++                                              
Sbjct: 200 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 259

Query: 266 ---------------------AC----------------------------------YAK 325
                                AC                                  Y+K
Sbjct: 260 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 319

Query: 326 LGELDEARALFDGMKQRDVVCWNVMIGGYAQNGLPNESLKLFRRMLVAKAMPNEITILAV 385
            GEL+ A  LF+ +  +DV+ WN +IGGY    L  E+L LF+ ML +   PN++T+L++
Sbjct: 320 CGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 379

Query: 386 LSACGQLGALESGRWVHSYIEN--KGIQINVHVGTALIDMYSKCGSLEDARLVFDGIRDK 445
           L AC  LGA++ GRW+H YI+   KG+     + T+LIDMY+KCG +E A  VF+ I  K
Sbjct: 380 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 439

Query: 446 DVVAWNSMIVGYSMHGFSQNALKLFEEMTETGYQPTDITFIGLLSACSHGGLVEEGRSFF 505
            + +WN+MI G++MHG +  +  LF  M + G QP DITF+GLLSACSH G+++ GR  F
Sbjct: 440 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIF 499

Query: 506 RLMRDKYLIEPKVEHYGCMVNLLGRAGHLEEAYELVKNMSIAADPVLWGSLLGSCRLHGN 565
           R M   Y + PK+EHYGCM++LLG +G  +EA E++  M +  D V+W SLL +C++HGN
Sbjct: 500 RTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 559

Query: 566 IKLGEEIAEFLVDQKLANSGTYVLLSNIYAATGNWEGVAKMRTLMKEHGIEKEPGCSSIE 625
           ++LGE  AE L+  +  N G+YVLLSNIYA+ G W  VAK R L+ + G++K PGCSSIE
Sbjct: 560 VELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 619

Query: 626 VNNKVHEFLAGERKHPKSKEIYVMLNEINSWLKARRYTPQIGVVLHDLGEEQKKQSLEVH 641
           +++ VHEF+ G++ HP+++EIY ML E+   L+   + P    VL ++ EE K+ +L  H
Sbjct: 620 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHH 679

BLAST of ClCG01G017160 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 511.9 bits (1317), Expect = 7.3e-145
Identity = 247/563 (43.87%), Postives = 368/563 (65.36%), Query Frame = 0

Query: 84  YAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTF 143
           Y + G LD +  VF T  E +V S++++I+  VQ    D+AL  + +M +  V+ +  T 
Sbjct: 176 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235

Query: 144 SSVLKSC----SLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQLFDKMPE 203
             VL +C    +LE G+ +     +   + +L +   ++D+Y + G +  A++LFD M E
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295

Query: 204 RSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGGYAQNGLPNESLKLFRRM 263
           +  V+ T ML  YA   + + AR + + M Q+D+V WN +I  Y QNG PNE+L +F  +
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355

Query: 264 LVAKAMP-NEITILAVLSACGQLGALESGRWVHSYIENKGIQINVHVGTALIDMYSKCGS 323
            + K M  N+IT+++ LSAC Q+GALE GRW+HSYI+  GI++N HV +ALI MYSKCG 
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGD 415

Query: 324 LEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTETGYQPTDITFIGLLSA 383
           LE +R VF+ +  +DV  W++MI G +MHG    A+ +F +M E   +P  +TF  +  A
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475

Query: 384 CSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLEEAYELVKNMSIAADPV 443
           CSH GLV+E  S F  M   Y I P+ +HY C+V++LGR+G+LE+A + ++ M I     
Sbjct: 476 CSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS 535

Query: 444 LWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYAATGNWEGVAKMRTLMK 503
           +WG+LLG+C++H N+ L E     L++ +  N G +VLLSNIYA  G WE V+++R  M+
Sbjct: 536 VWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMR 595

Query: 504 EHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINSWLKARRYTPQIGVVLH 563
             G++KEPGCSSIE++  +HEFL+G+  HP S+++Y  L+E+   LK+  Y P+I  VL 
Sbjct: 596 VTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQ 655

Query: 564 DLGEEQ-KKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLDCHAVMKLISEITGRK 623
            + EE+ K+QSL +HSEKLAI +GLIST+    I+++KNLRVC DCH+V KLIS++  R+
Sbjct: 656 IIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDRE 715

Query: 624 IVMRDRNRFHHFENGLCSCGDYW 641
           I++RDR RFHHF NG CSC D+W
Sbjct: 716 IIVRDRYRFHHFRNGQCSCNDFW 738

BLAST of ClCG01G017160 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 511.9 bits (1317), Expect = 7.3e-145
Identity = 262/672 (38.99%), Postives = 394/672 (58.63%), Query Frame = 0

Query: 45  FALLIDKSKSVDRLLQIHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPN 104
           +A LID +    +L QIHA LL  G   +  L  KL  + ++ G + ++  VFD    P 
Sbjct: 24  YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 83

Query: 105 VFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCS----LEPGKVLHC 164
           +F ++AII  + +   F  AL  YS M    V P+ FTF  +LK+CS    L+ G+ +H 
Sbjct: 84  IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143

Query: 165 QAIKLGFDSDLYVRTGLVDVYARGGDVVCARQLFD--KMPERSLVSQTAMLAC------- 224
           Q  +LGFD+D++V+ GL+ +YA+   +  AR +F+   +PER++VS TA+++        
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203

Query: 225 ------------------------------------------------------------ 284
                                                                       
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263

Query: 285 ---YAKLGELDEARALFDGMKQRDVVCWNVMIGGYAQNGLPNESLKLFRRMLVAKAMPNE 344
              YAK G++  A+ LFD MK  +++ WN MI GYA+NG   E++ +F  M+     P+ 
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDT 323

Query: 345 ITILAVLSACGQLGALESGRWVHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDG 404
           I+I + +SAC Q+G+LE  R ++ Y+     + +V + +ALIDM++KCGS+E ARLVFD 
Sbjct: 324 ISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR 383

Query: 405 IRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTETGYQPTDITFIGLLSACSHGGLVEEG 464
             D+DVV W++MIVGY +HG ++ A+ L+  M   G  P D+TF+GLL AC+H G+V EG
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443

Query: 465 RSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLEEAYELVKNMSIAADPVLWGSLLGSCR 524
             FF  M D + I P+ +HY C+++LLGRAGHL++AYE++K M +     +WG+LL +C+
Sbjct: 444 WWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK 503

Query: 525 LHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYAATGNWEGVAKMRTLMKEHGIEKEPGC 584
            H +++LGE  A+ L     +N+G YV LSN+YAA   W+ VA++R  MKE G+ K+ GC
Sbjct: 504 KHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGC 563

Query: 585 SSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINSWLKARRYTPQIGVVLHDLGEEQKKQS 641
           S +EV  ++  F  G++ HP+ +EI   +  I S LK   +       LHDL +E+ +++
Sbjct: 564 SWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEET 623

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038882525.10.0e+0093.59pentatricopeptide repeat-containing protein ELI1, chloroplastic [Benincasa hispi... [more]
KAG6604154.10.0e+0091.07Pentatricopeptide repeat-containing protein ELI1, chloroplastic, partial [Cucurb... [more]
XP_022950238.10.0e+0090.91pentatricopeptide repeat-containing protein ELI1, chloroplastic [Cucurbita mosch... [more]
KAG7034315.10.0e+0090.91Pentatricopeptide repeat-containing protein ELI1, chloroplastic, partial [Cucurb... [more]
XP_023543384.10.0e+0090.91pentatricopeptide repeat-containing protein ELI1, chloroplastic [Cucurbita pepo ... [more]
Match NameE-valueIdentityDescription
Q9SZT89.8e-21958.89Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... [more]
Q9FI802.4e-14843.59Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
Q9LN013.4e-14739.29Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
O823801.0e-14343.87Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9LTV81.0e-14338.99Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1GED10.0e+0090.91pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Cucurbita mos... [more]
A0A6J1IMD20.0e+0090.44pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Cucurbita max... [more]
A0A6J1BWF50.0e+0088.28pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Momordica cha... [more]
A0A1S3B0U70.0e+0089.69pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Cucumis melo ... [more]
A0A0A0KGF10.0e+0089.38DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G4922... [more]
Match NameE-valueIdentityDescription
AT4G37380.16.9e-22058.89Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G48910.11.7e-14943.59Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G08070.12.4e-14839.29Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.17.3e-14543.87Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G12770.17.3e-14538.99mitochondrial editing factor 22 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 308..549
e-value: 2.2E-40
score: 141.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 28..156
e-value: 5.4E-14
score: 53.9
coord: 157..286
e-value: 1.8E-27
score: 97.8
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 506..630
e-value: 1.2E-37
score: 128.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 176..200
e-value: 0.063
score: 13.6
coord: 407..431
e-value: 0.011
score: 16.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 231..278
e-value: 4.0E-8
score: 33.3
coord: 103..150
e-value: 3.0E-10
score: 40.1
coord: 332..380
e-value: 4.9E-11
score: 42.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 234..267
e-value: 7.5E-6
score: 23.8
coord: 335..368
e-value: 1.8E-5
score: 22.6
coord: 107..140
e-value: 4.8E-6
score: 24.4
coord: 204..234
e-value: 2.8E-6
score: 25.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 232..266
score: 11.334042
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 333..367
score: 12.386327
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 201..231
score: 9.04313
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 104..138
score: 10.577712
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 29..626
NoneNo IPR availablePANTHERPTHR47926:SF226PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN ELI1, CHLOROPLASTICcoord: 29..626

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G017160.1ClCG01G017160.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding