ClCG01G016520 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G016520
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	F-box domain-containing protein
Location	CG_Chr01: 30909304 .. 30911587 (-)
RNA-Seq Expression	ClCG01G016520
Synteny	ClCG01G016520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGCTGGAAAGCAACAAGATTATCAACATAAATTGTGGGCTTCCACTTCCACCGCATATCGTTCAGGTAATCTTCTCCAGACTTTCTATCTCCACTTTGCCCACCTGCAGGATCGTCTGTAAAACTTGGAATCGTCTGATTTTAGATTACGCCTGCTCTTCTAAATTCTCTCGCATCATCTCTATTTTTTATTTCGACCGCAATCACATTCCTTTTGGATTATCTAGCAATCCCAAGATCCATTGTTTCAATATTGATACGTTGAGTTCTGTTGCCTCATTTGAGTTCGACGCTGATTTTTCGGCTATCCACATTTTCAATCATTGTAAGGGCCTGCTCTTTATTGACAAAGAAGATAAAAATGGATGTTGTCGACTTGGCATATTAAATCCAATGACTAATGAGTTGTTCGAACTTCCTAGACCAGAATTAGAAAATATTCATAGGTTCTGATTTGGTTTCAGCCCTAAGTCGAAGCAGTACAAATTGTTTAAAGTTGATACTCCAGCCTTATTCAACATTTCATTTCAAGCTTAAATGATCCGTATTCCCTAAAGGATCTTGGAGATTTATCTTTTTTCCTTGGCATTCAAGTCTTGCATAACAAGTCAGTAATGCATCTATCTCCAGCAAGATATATATCAGATTTACTAGCTCGAGCTGGCATGACTGACTGCAAGCCTCTATTCATTCCCCTATGGTCTTTGGTGTGCATTTGTCCATTCATGATGGAGAACCTCTGGTAGATCCCACACAATATCAAAGCTTGGTTGGTGCTTTGCAGTATTACACCTTTACTTGCCCTGATATCAACTTTTCTGTGGACAAACTTTACCAATTTATGCACGCTCCTACATACACCCATCTTCAAGCTGCCAAGCGTCCTCTTCGCTATCTAAAAGGCACTATGAACCATGGGATTGTGTTGTCTTCTTCTTCTGTAGCTCTCACCTGCTTTACTGATGCAGATTGGGCCCGTTGCTCAGATGACAGACGAAGCACAAGTGGATTATGTGTGTTTCTTGGCTCTAGTTTAGTCTCTTGGGGCTCTTCCAAACAGAGGGTAGTGTCTCGTTCAAGTGCAGAGTCTGAATATCGGGAAATGTCGAATTCTGCTGCTGTATTATTATGGATTCAATCTCTTTTGTCTGAAATTAGTTTCTGCATCTACCTCCTCTGTTGCTGTTATATGACAATGTGAGTGCTACCTATTTGGCTGATAATCCAGTTCTTCACAACCATACCAAACATATTGAAATAGACCAACATTTCACGCGTGAAAAGTAGCTCGAGGACAGCTTTATGTCAGGTTTGTTCCGTCTGATGATCAGCTTGCTGACATCATGACTAAATCTCCCGTCTCCTCGGTTTAACAGCCTTAAGATCAAGCTCACTGTTGCTTCAACCCCTGTTTCGCGTGCGGGGGATGATAAGATGGTCTTTCCCTATCAGTTATTCTTTATTTTATTTTCCGTTGATTTAGAATTCTTTCTGTTTTGGGCTGTATTTTTCCATTTTACTTCTGTTATATCCTTCTCCTATCAGTGCTTGACATGTCACGTTACTTTTACTCATTAAATAGTTGCTGAATGAACCGGGCTCATTGAGCAATTTCTCCATTTTCGCATCTCTTCATTCTTCATCTTCTTTTATAATAAAAGTTACCCATGTCCTAAAAGACTCCGGTTCCTCCATTAACCCAACACACTCCAGCTCCTTCATAACGAAGGTTTTCAGGTTTGGTAGGAGTGGAACCAACCAATAGAGCCATTTTGACTTTCTGTCTTTTGACATATACTATTTTGGTGTTTACTTAGATGGAGTCATCTATTAGATTGGCATAGGAAAAAAAAGATGAGGTTATCATATATTCTTTTGATGTCGAAACTGAAAAAATTGAATTGATTGCGGTCTTGGAGGTTCCTCACTCTAGGAGTGCATACATTAAGACATTTAATGACAAGGTGGTTTATGCAACTGTTTTCATGGGACATCACCTCCTAAGCTTGAAAGTGTGGAGAATGCAAAGAAAGATTCATAGATGTTATTGATGACATACCAGGATTAGGGGAGTCAAATCTTTCACCTAATTAAAGCATTTGAAGATGAGGAGATATTGTTTTTGGCTCATAATACAGACTTATTTTGCTTGGATAAAATTGGGAGGAAGACCCAGATAAAAAAATTGAATTCAGATGAGACACTACTTAGTGGGATTGGTCTTATAGAATTCCCGAATTTTGGATCACTCGCAGACATTTTAGCAGGAAGTGACTGA

mRNA sequence

ATGGAGAAGCTGGAAAGCAACAAGATTATCAACATAAATTGTGGGCTTCCACTTCCACCGCATATCGTTCAGGTAATCTTCTCCAGACTTTCTATCTCCACTTTGCCCACCTGCAGGATCGTCTGTAAAACTTGGAATCGTCTGATTTTAGATTACGCCTGCTCTTCTAAATTCTCTCGCATCATCTCTATTTTTTATTTCGACCGCAATCACATTCCTTTTGGATTATCTAGCAATCCCAAGATCCATTGTTTCAATATTGATACGTTGAGTTCTGTTGCCTCATTTGAGTTCGACGCTGATTTTTCGGCTATCCACATTTTCAATCATTGTAAGGGCCTGCTCTTTATTGACAAAGAAGATAAAAATGGATGTTGTCGACTTGGCATATTAAATCCAATGACTAATGAGTTGTTCGAACTTCCTAGACCAGAATTAGAAAATATTCATAGGTTTTCAGGTTTGGTAGGAGTGGAACCAACCAATAGAGCCATTTTGACTTTCTGTCTTTTGACATATACTATTTTGGAAAAAAAAGATGAGGTTATCATATATTCTTTTGATGTCGAAACTGAAAAAATTGAATTGATTGCGGTCTTGGAGGTTCCTCACTCTAGGAGTGCATACATTAAGACATTTAATGACAAGGTGGTTTATGCAACTGTTTTCATGGGACATCACCTCCTAAGCTTGAAAGGGAGTCAAATCTTTCACCTAATTAAAGCATTTGAAGATGAGGAGATATTGTTTTTGGCTCATAATACAGACTTATTTTGCTTGGATAAAATTGGGAGGAAGACCCAGATAAAAAAATTGAATTCAGATGAGACACTACTTAGTGGGATTGGTCTTATAGAATTCCCGAATTTTGGATCACTCGCAGACATTTTAGCAGGAAGTGACTGA

Coding sequence (CDS)

ATGGAGAAGCTGGAAAGCAACAAGATTATCAACATAAATTGTGGGCTTCCACTTCCACCGCATATCGTTCAGGTAATCTTCTCCAGACTTTCTATCTCCACTTTGCCCACCTGCAGGATCGTCTGTAAAACTTGGAATCGTCTGATTTTAGATTACGCCTGCTCTTCTAAATTCTCTCGCATCATCTCTATTTTTTATTTCGACCGCAATCACATTCCTTTTGGATTATCTAGCAATCCCAAGATCCATTGTTTCAATATTGATACGTTGAGTTCTGTTGCCTCATTTGAGTTCGACGCTGATTTTTCGGCTATCCACATTTTCAATCATTGTAAGGGCCTGCTCTTTATTGACAAAGAAGATAAAAATGGATGTTGTCGACTTGGCATATTAAATCCAATGACTAATGAGTTGTTCGAACTTCCTAGACCAGAATTAGAAAATATTCATAGGTTTTCAGGTTTGGTAGGAGTGGAACCAACCAATAGAGCCATTTTGACTTTCTGTCTTTTGACATATACTATTTTGGAAAAAAAAGATGAGGTTATCATATATTCTTTTGATGTCGAAACTGAAAAAATTGAATTGATTGCGGTCTTGGAGGTTCCTCACTCTAGGAGTGCATACATTAAGACATTTAATGACAAGGTGGTTTATGCAACTGTTTTCATGGGACATCACCTCCTAAGCTTGAAAGGGAGTCAAATCTTTCACCTAATTAAAGCATTTGAAGATGAGGAGATATTGTTTTTGGCTCATAATACAGACTTATTTTGCTTGGATAAAATTGGGAGGAAGACCCAGATAAAAAAATTGAATTCAGATGAGACACTACTTAGTGGGATTGGTCTTATAGAATTCCCGAATTTTGGATCACTCGCAGACATTTTAGCAGGAAGTGACTGA

Protein sequence

MEKLESNKIININCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSRIISIFYFDRNHIPFGLSSNPKIHCFNIDTLSSVASFEFDADFSAIHIFNHCKGLLFIDKEDKNGCCRLGILNPMTNELFELPRPELENIHRFSGLVGVEPTNRAILTFCLLTYTILEKKDEVIIYSFDVETEKIELIAVLEVPHSRSAYIKTFNDKVVYATVFMGHHLLSLKGSQIFHLIKAFEDEEILFLAHNTDLFCLDKIGRKTQIKKLNSDETLLSGIGLIEFPNFGSLADILAGSD

Homology

[Close]

BLAST of ClCG01G016520 vs. NCBI nr
Match: XP_008459707.1 (PREDICTED: F-box protein At3g07870-like [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 9.4e-44
Identity = 142/377 (37.67%), Postives = 191/377 (50.66%), Query Frame = 0


Query: 1   MEKLESNKIININCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSR 60
           ME LE+ K I +N  L LPPHIV+ IFS+LSIS LPTCR+VCKTWN L+L+YA S+KF  
Sbjct: 1   MEILETKKRIPMNINLRLPPHIVRAIFSKLSISNLPTCRVVCKTWNNLVLEYASSTKFLP 60

Query: 61  IISIFYF----DRNHIPFGLS--SNPKIHCFNIDTLSS-VASFEFDADFSAIHIFNHCKG 120
             ++F        N+IPF  +   NPKIHC +ID+ +S VASF F+ D+S I I N C G
Sbjct: 61  TTTLFLSMADEISNYIPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNG 120

Query: 121 LLFIDKEDKNGCCRLGILNPMTNELFELPRPELE-NIHRFS----------GLVGVEPTN 180
           LL+I K   +  C  GILNPMTNE  E+P+PE+E ++H              L   EP  
Sbjct: 121 LLYICKFTFDSLCE-GILNPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEV 180

Query: 181 RAILTFCLLTYTI-------------------------------------LEKKDEVIIY 240
              L  C     I                                     LEK+ E +IY
Sbjct: 181 LENLKKCHYIMEIFTFDNGYKQWRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIY 240

Query: 241 SFDVETEKIELIAVLEV-PHSRSAYIKTFNDKVVYATVFMGHHLLSLKGSQI-------- 299
           + DV+TE++E  A LE+ P  ++  IK F ++ VYA + +    +S    +I        
Sbjct: 241 ALDVDTEQMECTATLEIGPSLKNGSIKIFEER-VYAIISLMDKRVSPTSYKIELWRMQKK 300

[Close]

BLAST of ClCG01G016520 vs. NCBI nr
Match: XP_004141602.1 (F-box protein At3g07870 [Cucumis sativus])

HSP 1 Score: 140.2 bits (352), Expect = 2.9e-29
Identity = 130/395 (32.91%), Postives = 182/395 (46.08%), Query Frame = 0


Query: 1   MEKLESNKIININCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSR 60
           MEKLE  +  NIN GL LPP++V+VI  +L+IS LP CR+V +TWN LIL+YA SSKF  
Sbjct: 1   MEKLECKR--NINLGLQLPPNVVEVILPKLTISDLPACRLVSRTWNHLILNYASSSKFIP 60

Query: 61  IISI-----FYFDRN-----HIPFGLSSNPKIHCFNID-TLSSVASFEFDADF--SAIHI 120
            + +      ++ RN     H       NPK++C +I+ T + +ASF FD +     I I
Sbjct: 61  NLFLAASYEIHYSRNCNCNPHCRPTFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKIKI 120

Query: 121 FNHCKGLLFIDKEDKNGCCRLGILNPMTNELFEL---PRPELENIHRFSGL--------- 180
            N C GLL+I K      C  GILNPMTNE F L   P+ + E+I  F G          
Sbjct: 121 LNSCNGLLYIHKVGDENFCN-GILNPMTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQY 180

Query: 181 -----VGVEPTNRAILT-----------------------FC-------LLTYTILEKKD 240
                +  E  +  ++                        +C       ++ +   +K++
Sbjct: 181 KLFKAIHDEEDSHLMMEVMRFGKNEETKEWRHLTCLPFVFYCDGVYLNGVIYWIGRQKEN 240

Query: 241 EVIIYSFDVETEKIELIAVLEVPHSRSA-----YIKTFNDKVVYATV------------- 300
           + +IYS +VETEKIE I VL+V  S +      YI  +N   +YAT+             
Sbjct: 241 KSVIYSLNVETEKIESITVLKVDPSYNTSDYGYYIGKYNGN-LYATIWIHGTCCKKVQLW 300

[Close]

BLAST of ClCG01G016520 vs. NCBI nr
Match: KAA0039746.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 120.2 bits (300), Expect = 3.1e-23
Identity = 124/387 (32.04%), Postives = 162/387 (41.86%), Query Frame = 0


Query: 11  NINCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSRIISIFYFDRN 70
           ++  G  LPPHIV  I  RL IS LP  R+V KTWN  ILDYA     +   +      +
Sbjct: 11  SMKLGRGLPPHIVSEILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTNANAFLLSTSD 70

Query: 71  HIPFGLSSNPKIHCFNIDTLSSV---------------ASFEFDADFSAIHIF-NHCKGL 130
             P     NPK++C + DT   +                S  FD D+S I +  N C GL
Sbjct: 71  TGPGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGL 130

Query: 131 LFIDKEDKNGCCRL--GILNPMTNELFELPRPELENIHRFSGLVGVEPTNRAILTF---- 190
           +FI K     C     GI NPMTNE  ++PR EL+  + F GL G  PT +    F    
Sbjct: 131 VFIRK-----CAFFSDGIFNPMTNEFLQVPRHELDGDNYFYGL-GFSPTTKQYKMFRVNP 190

Query: 191 -------CLLTYTILE-------------------------------------KKDEVII 250
                   +LT+   E                                     K++E  I
Sbjct: 191 NNNSSIMYILTFRRSETNYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQYKENEYTI 250

Query: 251 YSFDVETEKIELIAVLEV-PHSRSAY----IKTFNDKVVYATVF--------------MG 302
           Y+ +VETE+IEL AVL + P S S+     +K FN   VYAT +              M 
Sbjct: 251 YALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGS-VYATFYIDPKTCNSVIQVWRMQ 310

[Close]

BLAST of ClCG01G016520 vs. NCBI nr
Match: TYK24751.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 119.8 bits (299), Expect = 4.1e-23
Identity = 124/389 (31.88%), Postives = 163/389 (41.90%), Query Frame = 0


Query: 11  NINCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSRIISIFYFDRN 70
           ++  G  LPPHIV+ I  RL IS LP  R+V KTWN  ILDYA     +   +      +
Sbjct: 14  SMKLGRGLPPHIVREILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTNANAFLLSTSD 73

Query: 71  HIPFGLSSNPKIHCFNIDTLSSV---------------ASFEFDADFSAIHIF-NHCKGL 130
             P     NPK++C + DT   +                S  FD D+S I +  N C GL
Sbjct: 74  TGPGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGL 133

Query: 131 LFIDKEDKNGCCRL----GILNPMTNELFELPRPELENIHRFSGLVGVEPTNRAILTF-- 190
           +FI K     C       GI NPMTNE  ++PR EL+  + F GL G  PT +    F  
Sbjct: 134 VFIRK-----CAFFSRSDGIFNPMTNEFLQVPRHELDGDNYFYGL-GFSPTTKQYKMFRV 193

Query: 191 ---------CLLTYTILE-------------------------------------KKDEV 250
                     +LT+   E                                     K++E 
Sbjct: 194 NPNNNSSIMYILTFRRSETNYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQYKENEY 253

Query: 251 IIYSFDVETEKIELIAVLEV-PHSRSAY----IKTFNDKVVYATVF-------------- 302
            IY+ +VETE+IEL AVL + P S S+     +K FN   VYAT +              
Sbjct: 254 TIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGS-VYATFYIDPKTCNSVIQVWR 313

[Close]

BLAST of ClCG01G016520 vs. NCBI nr
Match: XP_038879760.1 (uncharacterized protein LOC120071509 [Benincasa hispida])

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-22
Identity = 98/276 (35.51%), Postives = 125/276 (45.29%), Query Frame = 0


Query: 12  INCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSK-FSRIISIFYFDRN 71
           +N G  L   I + IF RL +S L TCR+VCKTWN LILDY+ SSK  +    +F  D N
Sbjct: 4   VNWGRELQEDIGESIFGRLVVSNLATCRVVCKTWNSLILDYSSSSKLLTNDFILFTRDGN 63

Query: 72  HIPFGLSS--NPKIHCFNIDTL----------SSVASFEFDADFSAIHIFNHCKGLLFID 131
            I  G SS  NPK+HCF +D L          +  AS  FD D+S I     C GLL I 
Sbjct: 64  PI-CGSSSLYNPKMHCFRLDDLDVDSDMEFEVNKFASLRFDGDWSFILPIRSCNGLLLIS 123

Query: 132 KEDKNGCCRLGILNPMTNELFELPR---------------PELENIHRFSGLVGVEP--- 191
           K     C  +GI NPMTNE F +PR               P  ++   F   +  EP   
Sbjct: 124 KSTFY-CSCMGIFNPMTNEFFRVPRDNFDANKYVYGFGFIPTTKHYKLFRITIEDEPSYS 183

Query: 192 TNRAILTF--------------------------CL-------LTYTILEKKD---EVII 218
           +   +LTF                          C        + Y +  +KD   E +I
Sbjct: 184 SRMEVLTFGRGGINPNPKQSQNQWRHLYSIPSDICCKGAYFNGIIYWLGREKDEQNEYVI 243

[Close]

BLAST of ClCG01G016520 vs. ExPASy TrEMBL
Match: A0A1S3CB99 (F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 4.5e-44
Identity = 142/377 (37.67%), Postives = 191/377 (50.66%), Query Frame = 0


Query: 1   MEKLESNKIININCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSR 60
           ME LE+ K I +N  L LPPHIV+ IFS+LSIS LPTCR+VCKTWN L+L+YA S+KF  
Sbjct: 1   MEILETKKRIPMNINLRLPPHIVRAIFSKLSISNLPTCRVVCKTWNNLVLEYASSTKFLP 60

Query: 61  IISIFYF----DRNHIPFGLS--SNPKIHCFNIDTLSS-VASFEFDADFSAIHIFNHCKG 120
             ++F        N+IPF  +   NPKIHC +ID+ +S VASF F+ D+S I I N C G
Sbjct: 61  TTTLFLSMADEISNYIPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNG 120

Query: 121 LLFIDKEDKNGCCRLGILNPMTNELFELPRPELE-NIHRFS----------GLVGVEPTN 180
           LL+I K   +  C  GILNPMTNE  E+P+PE+E ++H              L   EP  
Sbjct: 121 LLYICKFTFDSLCE-GILNPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEV 180

Query: 181 RAILTFCLLTYTI-------------------------------------LEKKDEVIIY 240
              L  C     I                                     LEK+ E +IY
Sbjct: 181 LENLKKCHYIMEIFTFDNGYKQWRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIY 240

Query: 241 SFDVETEKIELIAVLEV-PHSRSAYIKTFNDKVVYATVFMGHHLLSLKGSQI-------- 299
           + DV+TE++E  A LE+ P  ++  IK F ++ VYA + +    +S    +I        
Sbjct: 241 ALDVDTEQMECTATLEIGPSLKNGSIKIFEER-VYAIISLMDKRVSPTSYKIELWRMQKK 300

[Close]

BLAST of ClCG01G016520 vs. ExPASy TrEMBL
Match: A0A0A0KSJ2 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643290 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-29
Identity = 130/395 (32.91%), Postives = 182/395 (46.08%), Query Frame = 0


Query: 1   MEKLESNKIININCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSR 60
           MEKLE  +  NIN GL LPP++V+VI  +L+IS LP CR+V +TWN LIL+YA SSKF  
Sbjct: 1   MEKLECKR--NINLGLQLPPNVVEVILPKLTISDLPACRLVSRTWNHLILNYASSSKFIP 60

Query: 61  IISI-----FYFDRN-----HIPFGLSSNPKIHCFNID-TLSSVASFEFDADF--SAIHI 120
            + +      ++ RN     H       NPK++C +I+ T + +ASF FD +     I I
Sbjct: 61  NLFLAASYEIHYSRNCNCNPHCRPTFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKIKI 120

Query: 121 FNHCKGLLFIDKEDKNGCCRLGILNPMTNELFEL---PRPELENIHRFSGL--------- 180
            N C GLL+I K      C  GILNPMTNE F L   P+ + E+I  F G          
Sbjct: 121 LNSCNGLLYIHKVGDENFCN-GILNPMTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQY 180

Query: 181 -----VGVEPTNRAILT-----------------------FC-------LLTYTILEKKD 240
                +  E  +  ++                        +C       ++ +   +K++
Sbjct: 181 KLFKAIHDEEDSHLMMEVMRFGKNEETKEWRHLTCLPFVFYCDGVYLNGVIYWIGRQKEN 240

Query: 241 EVIIYSFDVETEKIELIAVLEVPHSRSA-----YIKTFNDKVVYATV------------- 300
           + +IYS +VETEKIE I VL+V  S +      YI  +N   +YAT+             
Sbjct: 241 KSVIYSLNVETEKIESITVLKVDPSYNTSDYGYYIGKYNGN-LYATIWIHGTCCKKVQLW 300

[Close]

BLAST of ClCG01G016520 vs. ExPASy TrEMBL
Match: A0A0A0LWG1 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.9e-24
Identity = 116/403 (28.78%), Postives = 166/403 (41.19%), Query Frame = 0


Query: 1   MEKLE-SNKIININCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFS 60
           +E +E S + + INCG  LPP I + IFS+L IS LP+CR+V  TWN L+LDYA S++  
Sbjct: 8   IENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYASSTQLQ 67

Query: 61  RIISIFYFDRNHIPFGLS-SNPKIHCFNIDT--------------LSSVASFEFDADFS- 120
            + + F    +         NPK+HC N+DT                  AS +FD D++ 
Sbjct: 68  FLKNAFLLSTSDRGLNYKLCNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQFDGDWTY 127

Query: 121 AIHIFNHCKGLLFIDKEDKNGCCRLGILNPMTNELFELPR-------------------- 180
            I +   C GL+ I K      C+ GI NPMTNE  ++                      
Sbjct: 128 TIIMAGSCNGLMLISKCSDYTWCQ-GIFNPMTNEFLQVSEHGTFDDFYLYGFGFSPITKQ 187

Query: 181 -------PELENIHRFSGLV-----------GVEPTNRAI-------------------- 240
                   +     R S  V           G   TN +I                    
Sbjct: 188 YKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPFEIVADG 247

Query: 241 -----LTFCLLTYTILEKKDEVIIYSFDVETEKIELIAVLEVPHSRSAYIKTFNDKVVYA 300
                + + L+     +K+ + +IY+ DVETE IE+  VL+VP +    I  FN   +YA
Sbjct: 248 VYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFNG-TIYA 307

[Close]

BLAST of ClCG01G016520 vs. ExPASy TrEMBL
Match: A0A5A7TCF3 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00060 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-23
Identity = 124/387 (32.04%), Postives = 162/387 (41.86%), Query Frame = 0


Query: 11  NINCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSRIISIFYFDRN 70
           ++  G  LPPHIV  I  RL IS LP  R+V KTWN  ILDYA     +   +      +
Sbjct: 11  SMKLGRGLPPHIVSEILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTNANAFLLSTSD 70

Query: 71  HIPFGLSSNPKIHCFNIDTLSSV---------------ASFEFDADFSAIHIF-NHCKGL 130
             P     NPK++C + DT   +                S  FD D+S I +  N C GL
Sbjct: 71  TGPGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGL 130

Query: 131 LFIDKEDKNGCCRL--GILNPMTNELFELPRPELENIHRFSGLVGVEPTNRAILTF---- 190
           +FI K     C     GI NPMTNE  ++PR EL+  + F GL G  PT +    F    
Sbjct: 131 VFIRK-----CAFFSDGIFNPMTNEFLQVPRHELDGDNYFYGL-GFSPTTKQYKMFRVNP 190

Query: 191 -------CLLTYTILE-------------------------------------KKDEVII 250
                   +LT+   E                                     K++E  I
Sbjct: 191 NNNSSIMYILTFRRSETNYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQYKENEYTI 250

Query: 251 YSFDVETEKIELIAVLEV-PHSRSAY----IKTFNDKVVYATVF--------------MG 302
           Y+ +VETE+IEL AVL + P S S+     +K FN   VYAT +              M 
Sbjct: 251 YALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGS-VYATFYIDPKTCNSVIQVWRMQ 310

[Close]

BLAST of ClCG01G016520 vs. ExPASy TrEMBL
Match: A0A5D3DMB7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003140 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-23
Identity = 124/389 (31.88%), Postives = 163/389 (41.90%), Query Frame = 0


Query: 11  NINCGLPLPPHIVQVIFSRLSISTLPTCRIVCKTWNRLILDYACSSKFSRIISIFYFDRN 70
           ++  G  LPPHIV+ I  RL IS LP  R+V KTWN  ILDYA     +   +      +
Sbjct: 14  SMKLGRGLPPHIVREILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTNANAFLLSTSD 73

Query: 71  HIPFGLSSNPKIHCFNIDTLSSV---------------ASFEFDADFSAIHIF-NHCKGL 130
             P     NPK++C + DT   +                S  FD D+S I +  N C GL
Sbjct: 74  TGPGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGL 133

Query: 131 LFIDKEDKNGCCRL----GILNPMTNELFELPRPELENIHRFSGLVGVEPTNRAILTF-- 190
           +FI K     C       GI NPMTNE  ++PR EL+  + F GL G  PT +    F  
Sbjct: 134 VFIRK-----CAFFSRSDGIFNPMTNEFLQVPRHELDGDNYFYGL-GFSPTTKQYKMFRV 193

Query: 191 ---------CLLTYTILE-------------------------------------KKDEV 250
                     +LT+   E                                     K++E 
Sbjct: 194 NPNNNSSIMYILTFRRSETNYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQYKENEY 253

Query: 251 IIYSFDVETEKIELIAVLEV-PHSRSAY----IKTFNDKVVYATVF-------------- 302
            IY+ +VETE+IEL AVL + P S S+     +K FN   VYAT +              
Sbjct: 254 TIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGS-VYATFYIDPKTCNSVIQVWR 313

The following BLAST results are available for this feature:

BLAST of ClCG01G016520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459707.1	9.4e-44	37.67	PREDICTED: F-box protein At3g07870-like [Cucumis melo]	[more]
XP_004141602.1	2.9e-29	32.91	F-box protein At3g07870 [Cucumis sativus]	[more]
KAA0039746.1	3.1e-23	32.04	F-box protein [Cucumis melo var. makuwa]	[more]
TYK24751.1	4.1e-23	31.88	F-box protein [Cucumis melo var. makuwa]	[more]
XP_038879760.1	1.2e-22	35.51	uncharacterized protein LOC120071509 [Benincasa hispida]	[more]

BLAST of ClCG01G016520 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG01G016520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CB99	4.5e-44	37.67	F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1	[more]
A0A0A0KSJ2	1.4e-29	32.91	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643290 PE=4 ...	[more]
A0A0A0LWG1	8.9e-24	28.78	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 ...	[more]
A0A5A7TCF3	1.5e-23	32.04	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00060 ...	[more]
A0A5D3DMB7	2.0e-23	31.88	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003140...	[more]

BLAST of ClCG01G016520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 18..57 e-value: 4.3E-5 score: 32.9
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 18..51 e-value: 1.0E-7 score: 31.6
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 18..61 score: 8.861604
None	No IPR available	GENE3D	1.20.1280.50		coord: 17..54 e-value: 6.5E-7 score: 31.3
None	No IPR available	PANTHER	PTHR47993:SF20	F-BOX FAMILY PROTEIN	coord: 21..142
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 21..142
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 18..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G016520.1	ClCG01G016520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding