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ClCG01G016505 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATGGCAGCTGACATCAATGGCCACCGGGTAATTAATTGTTCGAGGCTTGATAGTACGAGTTAACACTTTCATTCTTTTCTTAAATAAATAATTTTCTTATAAAATGGAATGGTTAAAGTTCTAATGATGGGTAGTCATCTACAAGCATCTCAAAGTGGAAGGAGATTGCAGAATCACATGGCGTTCAGGAATCAAAAGGCCTAATTTCAATTTTCACGGGAAAATGCACAATGTCTGTGTTAACCAATATGATCGTCATACAATATATCATATTTTTCTTTTATTCTCAATATATCAATTGTGGTGTTACACCAGCTTATTTAACATGTACTGCTTAGTTTTGGAATGTTCTATCTAGTTCCTTTTTCATAATTATCTGGCTTCTGGTCTAAAAATGATACATTGATTTTATTGTAGGTTTATAATTCTTTCTGCCGAGTTTGACACTCCCAGCTGCAACTAATTGATCACTGGCTGCTTCAATATGTTGAACTTTATGCACATTGTGCCGTCCTCTTTTTCATTTTCCTTAGTGCACGGGATACTATTATAATGAATGAGAGCAGCTGTCCTATCTTTGCAATGGACCTTGGTTCTTTCTTTCCATCAACGAGCTCTGATTCGGACACCCTGCTTATCGTAGAACGTAGTCGATTCTAACCATGTTTTTTTGTTAAGGATAAATGATGTATTAGGCCATCCTTAGACTGATTATTCTGCCGTGTGAGATTGCCATCAAAATAAAAGTTGCGTTGTTTGAAGTTATGTGCATCATGCGAAAGCATAGCTAAACCCTTGAGAAAAATACGAGCAGTCAGATAATGAAGGTAGTAGGAAACTAAACCCTTTATTTAAGGGCATCTCCAGAATTTGTTGGCTTGACAATGTTTTTTGTTTTATATCTTTTTGATATTTACTTTTTGAATAATTTCTATTGATTTCGGCATTGCATAGCTAAGTTGGTTCAAATCATCAAATTTGAGAAATTTGTATAGATGACCCAAATTGAAGGGTCTAAATGAAATTTGGGCTCCTCCCAGATTTTCAATGAAATATGGCCTTCTGCTGGCGTCAGCGTCGTGTGAATTTATCGAACTGCCCTCAAAATCGTTATCCAGAGGCACTCACACGACTTTCGGTCTTGTCTCTTAGTCCCCACTATTTTCCTTTTTCTTTTTTCTTTGATTCTTTTTTTGTGTTTTTTTTATACATTTCTTCTTCTTTTTTTTATTTTATTTTTACTTTTTTTCTGTTTTTTTTGTTGTCGTCTTTTTTTTTTTTTTCCATTTTTCTTTCATCATTTTTTTGTGTTTCTTTGCATCAAGCATCAAACATAGAAAATAGAGCATTAGACCATCAAGTAAACTTACAACATAAAGTATACTCTCTGTCACTTTCTCGTAAAGCTTTTTGTGACTTTTCCAAACTTCGATACGACCAACTCCAATGTGCTCAAGAGAAAGCGAGCGAGAGAGATAAGAGTAATTGTGAGTGAGGAAATGAAGCGAGAGCGAGGTTGAGAGGCCCAAATGAGCGAGGTTGGAATTTCCTGTAAAGTTGACCAGTCTACTCCTAACCTCGCTCTCGCTTCCTTTCCTCATTTACCATCACTCTTATCTCTATTGCTCTTTCTTTCTCTCTCACTTTTGCTCTTTTGCTCTCACTCTTCGAAGTTTGTCGCGTCCAAGTTTGGAAAAGTCACAGAGAGCTTTACGGGAAAGTGATAGAGATTATACTTTATGTTGTGTTTGATGCTCGATGCAAAGAAACGGAAAAAAAAAGACATACAAAAAAAGAACAAAAGTAAAAAAAGGGAAGAAGAAATGCATAAAAAAAAACAAATAAATTTCCCAAAACCATTTTTGGATAACTTTATTGAATTTCATAGTTATTTCGGTTTACTTTTTTTATTTTTTTATTTTTAGTTTCAAGATATTGTTGTCGTAGCTTAAAATATATGTTCTAACATGTTAATATAGACATGTATTCCAATCGTTTAGGTTAAAATTGAGTGGTAGGTGAGAAATTATTTATTTATGAATAAAGGAATATACAAATTAACAAAATAACTTCCTGCTTTGAATTCAATCTTGAAGAAATTGTACGTTTCAAATGGATCAAAGAAGGAAGGGTTCCTCTACAAACCATTCGAGCTGAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGGGTATTAGGCGTAAACATTTGGATATTTGTAGACGAACAATAA ATGAAAATGGCAGCTGACATCAATGGCCACCGGGTTTATAATTCTTTCTGCCGACTGCAACTAATTGATCACTGGCTGCTTCAATATGTTGAACTTTATGCACATTGTGCCGTCCTCTTTTTCATTTTCCTTAGTGCACGGGATACTATTATAATGAATGAGAGCAGCTGTCCTATCTTTGCAATGGACCTTGGTTCTTTCTTTCCATCAACGAGCTCTGATTCGGACACCCTGCTTATCGTAGAACAAATTGTACGTTTCAAATGGATCAAAGAAGGAAGGGTTCCTCTACAAACCATTCGAGCTGAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGGGTATTAGGCGTAAACATTTGGATATTTGTAGACGAACAATAA ATGAAAATGGCAGCTGACATCAATGGCCACCGGGTTTATAATTCTTTCTGCCGACTGCAACTAATTGATCACTGGCTGCTTCAATATGTTGAACTTTATGCACATTGTGCCGTCCTCTTTTTCATTTTCCTTAGTGCACGGGATACTATTATAATGAATGAGAGCAGCTGTCCTATCTTTGCAATGGACCTTGGTTCTTTCTTTCCATCAACGAGCTCTGATTCGGACACCCTGCTTATCGTAGAACAAATTGTACGTTTCAAATGGATCAAAGAAGGAAGGGTTCCTCTACAAACCATTCGAGCTGAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGGGTATTAGGCGTAAACATTTGGATATTTGTAGACGAACAATAA MKMAADINGHRVYNSFCRLQLIDHWLLQYVELYAHCAVLFFIFLSARDTIIMNESSCPIFAMDLGSFFPSTSSDSDTLLIVEQIVRFKWIKEGRVPLQTIRAEIDYCCYPVRTIYGVLGVNIWIFVDEQ Homology
BLAST of ClCG01G016505 vs. NCBI nr
Match: YP_009752619.1 (ribosomal protein S3 [Trichosanthes homophylla] >QIT05015.1 ribosomal protein S3 [Trichosanthes homophylla] >QIT05100.1 ribosomal protein S3 [Trichosanthes kirilowii] >QJD26333.1 ribosomal protein S3 [Trichosanthes kirilowii] >QJD26420.1 ribosomal protein S3 [Trichosanthes kirilowii]) HSP 1 Score: 93.6 bits (231), Expect = 1.3e-15 Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of ClCG01G016505 vs. NCBI nr
Match: YP_009447489.1 (ribosomal protein S3 [Cucurbita maxima] >ALO22084.1 ribosomal protein S3 [Cucurbita ecuadorensis] >ALO22122.1 ribosomal protein S3 [Cucurbita ficifolia] >ALO22184.1 ribosomal protein S3 [Cucurbita foetidissima] >ALO22320.1 ribosomal protein S3 [Cucurbita maxima subsp. andreana] >ALO22892.1 ribosomal protein S3 [Cucurbita pedatifolia]) HSP 1 Score: 93.6 bits (231), Expect = 1.3e-15 Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of ClCG01G016505 vs. NCBI nr
Match: YP_009752281.1 (ribosomal protein S3 [Trichosanthes baviensis] >YP_009753827.1 ribosomal protein S3 [Trichosanthes pilosa] >QIT04255.1 ribosomal protein S3 [Trichosanthes baviensis] >QIT05691.1 ribosomal protein S3 [Trichosanthes pilosa]) HSP 1 Score: 93.6 bits (231), Expect = 1.3e-15 Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of ClCG01G016505 vs. NCBI nr
Match: YP_009346519.1 (ribosomal protein S3 [Cucumis x hytivus] >AOW71130.1 ribosomal protein S3 [Cucumis x hytivus] >QCY72881.1 ribosomal protein S3 [Cucumis hystrix]) HSP 1 Score: 93.6 bits (231), Expect = 1.3e-15 Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of ClCG01G016505 vs. NCBI nr
Match: YP_009751776.1 (ribosomal protein S3 [Herpetospermum pedunculosum] >QIT04509.1 ribosomal protein S3 [Herpetospermum pedunculosum] >QJR52996.1 ribosomal protein S3 [Herpetospermum pedunculosum]) HSP 1 Score: 93.6 bits (231), Expect = 1.3e-15 Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of ClCG01G016505 vs. ExPASy Swiss-Prot
Match: Q4VZN0 (30S ribosomal protein S3, chloroplastic OS=Cucumis sativus OX=3659 GN=rps3 PE=3 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.3e-18 Identity = 38/48 (79.17%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of ClCG01G016505 vs. ExPASy Swiss-Prot
Match: A1EA47 (30S ribosomal protein S3, chloroplastic OS=Agrostis stolonifera OX=63632 GN=rps3 PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 4.8e-16 Identity = 36/48 (75.00%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of ClCG01G016505 vs. ExPASy Swiss-Prot
Match: Q332T8 (30S ribosomal protein S3, chloroplastic OS=Lactuca sativa OX=4236 GN=rps3 PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 4.8e-16 Identity = 35/46 (76.09%), Postives = 42/46 (91.30%), Query Frame = 0
BLAST of ClCG01G016505 vs. ExPASy Swiss-Prot
Match: A8Y9C5 (30S ribosomal protein S3, chloroplastic OS=Lolium perenne OX=4522 GN=rps3 PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 4.8e-16 Identity = 36/48 (75.00%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of ClCG01G016505 vs. ExPASy Swiss-Prot
Match: Q6END5 (30S ribosomal protein S3, chloroplastic OS=Oryza nivara OX=4536 GN=rps3 PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 4.8e-16 Identity = 36/48 (75.00%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of ClCG01G016505 vs. ExPASy TrEMBL
Match: A0A6H0ESU0 (30S ribosomal protein S3, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=rps3 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 6.5e-16 Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of ClCG01G016505 vs. ExPASy TrEMBL
Match: A0A1S4EU44 (30S ribosomal protein S3, chloroplastic OS=Cucumis melo OX=3656 GN=rps3 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 6.5e-16 Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of ClCG01G016505 vs. ExPASy TrEMBL
Match: A0A249RZG7 (30S ribosomal protein S3, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rps3 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 6.5e-16 Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of ClCG01G016505 vs. ExPASy TrEMBL
Match: A0A1P8LEA6 (30S ribosomal protein S3, chloroplastic OS=Citrullus mucosospermus OX=519315 GN=rps3 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 6.5e-16 Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of ClCG01G016505 vs. ExPASy TrEMBL
Match: A0A6M3RWJ0 (30S ribosomal protein S3, chloroplastic OS=Trichosanthes kirilowii var. japonica OX=61011 GN=rps3 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 6.5e-16 Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of ClCG01G016505 vs. TAIR 10
Match: ATCG00800.1 (structural constituent of ribosome ) HSP 1 Score: 83.6 bits (205), Expect = 1.3e-16 Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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