ClCG01G015990 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G015990
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	iron-sulfur assembly protein IscA, chloroplastic-like
Location	CG_Chr01: 30326395 .. 30329311 (-)
RNA-Seq Expression	ClCG01G015990
Synteny	ClCG01G015990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAATACAAAAAAAAGGATGAATAAAATATCTGAATCACTCGATCTTAACGAAAATATTATATCTTGACCGCACGATCCCAATTCACAAACCTTTCCGACTAGTCATAGACGGCGGTGCGCATATTTCCCGGCCGCCGTTCGCCGTTCGCCGGAATAATCGCGGCAGCACAACCGGATTTGTCAGATGGCGTTCTCTTCGATTACCATGAAATGCCCCCCTGTTCTTCACCTGCGAGCCCTTCCTAAAAGTTCTGTACCTCAAAGTTCAATTTTCTTTCGATATTCACCTACGAGATTCAGCCGAAGAAAATCCTTATCGATTCGATCGGTTTCGGTCCCAGGTACGCTCTCTCTCTTTATCTCTCTCTTTTTTCCCCCTCTGTTTTCCTCCTCGTTTTCCTCCTTGTTTTTTGGTTATTATACTTGACTGTATCACCGTAGTTCATCGTCGTACTGTTTGGGTAAAAATTATTCAGGTTATTTTTTTCCTTTTGGATTGGTTTGGAGCTGTGAATTTGTGATGAACGCTAGGATTTCAGTTATATTTTTTTAATTAATTAAACGTAGGATTGATTTATTGGTTGCTTGGAAAGTTCTATATTGACATTAACAGAATTTTGGGGGGTATCTTGTTGAGTTACATGGAAAATAAATTTCCCCGCTACTTGAACTGATGAATTGTTTGTGAGTTCTAATTCGAGATCCAGTTGGTGATATACAAACCATGAGTTTATATCTTTCTTTTGTACTAATGCTTAAAGGATTAGGATGGATTGATCTTCATGTGGGGGAAGATGTTCATTATTTCTTGTGTTTGATAGCACAGATCGTTTATTCTTTTTAGAGCGTGTTTAGGTGTTAAGAAATAGACAATTAAAGATGAACAAAAAACATAAAGCAATAGACAATCTGGTTCACTATCAATGTGTTAGGCACGCTCACGGACAGAGGGAGAGAGTAGTTTATTACTAAAGAGAATAACTCATATTACAAATTGTAAATAACATAAGTAGAATAAATACGAATATTGCTTAGATTTAAAATCATTCTTGTCATATCTAAAACCACTTTGAAATATGTCTTTAATTAGGTAAAAATCAATTTAACGTTTGATTTTACACTTTTAAATGCTGTTTACATACCATGATACCATCAAATTTGATTTTGAAAGATTAAAAACATGTTTAAAGTGATTTTGAATATGAAAAAAATGATTTTAACCTTTCAAAATAACTCCAAAGATGCCCTTAGACATCTTCAGGTGCAATACTGTTTGTGGTTTTCTCTATGGCACTTTCCCTTAGCATGTTACTGCAGATCAAAAGATATAAATAACCTACTGAATCTTGTATTACAGTTTTTGCATATGAAATATGATGAGTATATCATGTTTATGATTAAAGTTTGCCTTTTTCATCTTATGTTCTTAACATATAAATTGTGATTAAGCAGCTGCGCCAGCATCTGAGGGTATAGCACCGGCTATCTCATTAACTGATAATGCATTGAAACACTTGAATAAGATGAGATCTGAACGTAATGAAGATTTATGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCCTACACTATGGAGTTTGAGAACAGGGCAAATGCTAGACCTGATGACTCAATTATAGAATACAACGGTTTTGTGATTGGTAAGAGTTATAGCTTTGCTTTTTTCACTCTGAATTTCTAGTGAGGTTTTTAGTAACAGTGCAACTGTTTGAAGAAATCCTTTTTGAATGCACTATATTTGTAGATGAGATCCATTGCTATGTATCACACATACATATATGCCATAAATTTGAAGAAATCCTTTTTAGGATGGAAGAAGCTTTTATTTTCATATACATTCAGATATTGATGGGTATTCCATGAGCCATATATGCCATAAATTTGAAGCACTCTACAAGAATAATTTTACTCTATAGTTCATAATCTTTCTCTTAGCTCCAAAGGAAAACAATGGAATATCTAAGTCTAATTTTGCATCTTTTTGGATTGATACTTTCCTTCCCGTGGAATGGAAGAGGGCAAGTTTTCAATTTTTTTAAAGGATGAAAGAAGCTTATATTTCATGAGCCACATGCCATAAATTTGTTGGACTCTACGAGAATAATTTTACTCCATAGCTCATAATCTATCTCTTCTCTTGGACACTCAATGACTTGAATTATTAGATATCAGCAAATTTTTATGCTAACTGACAAGCAGGTTGCGCAACAACTTCTGTCAAATATACTTTTCTTTAATGTATACCTTTCTTTAATGTATACCGTTGGTTGTTCAACATAAACTTGTATATTGTTTCAATTCCTTGCTAATTGCTCTCTACTCTATTGATATAAGGAAAGTAAGCATCTTTTAGTGAACTATGAAAGTATCTTTTTATCTACTTTATTTTCCTCTATACCCTTTTAAGTTGTAGCATCGAAGACGAATTTGAGTTAACTTCGAGCTTGAACTTTTGACACAAACTTCCCTCTCTTCTTGTTCTGTAGTATGTGATCCAAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGTGACGCACTTATTGGTGGGGGCTTCTCTTTCAAGAATCCAAATGCTACACAAACATGTGGTTGTGGGAAATCATTTGCTGCAGAAATGTAGGACCATCATTTGTATATATGAATGATTCAATAGAAACTTGATAATTTCAGGTTAGAGAAAACTTAGAATGTGAAAAAACTCCTGGTTTGCTTGACCATTGATCCTAATAGTATGTATACCTTCTATTACAACCCCTTTGTTGGTAATATTTCTGCTTTAGCCCTTCTGGAAAAGGGATTAAGGCTTTTAGTCTTTCATGCTTACTTTCTTACAGATTCTGTAATTGTTGGATAAAATATTATAGAATTCACG

mRNA sequence

AAAAAAAATACAAAAAAAAGGATGAATAAAATATCTGAATCACTCGATCTTAACGAAAATATTATATCTTGACCGCACGATCCCAATTCACAAACCTTTCCGACTAGTCATAGACGGCGGTGCGCATATTTCCCGGCCGCCGTTCGCCGTTCGCCGGAATAATCGCGGCAGCACAACCGGATTTGTCAGATGGCGTTCTCTTCGATTACCATGAAATGCCCCCCTGTTCTTCACCTGCGAGCCCTTCCTAAAAGTTCTGTACCTCAAAGTTCAATTTTCTTTCGATATTCACCTACGAGATTCAGCCGAAGAAAATCCTTATCGATTCGATCGGTTTCGGTCCCAGCTGCGCCAGCATCTGAGGGTATAGCACCGGCTATCTCATTAACTGATAATGCATTGAAACACTTGAATAAGATGAGATCTGAACGTAATGAAGATTTATGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCCTACACTATGGAGTTTGAGAACAGGGCAAATGCTAGACCTGATGACTCAATTATAGAATACAACGGTTTTGTGATTGTATGTGATCCAAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGTGACGCACTTATTGGTGGGGGCTTCTCTTTCAAGAATCCAAATGCTACACAAACATGTGGTTGTGGGAAATCATTTGCTGCAGAAATGTAGGACCATCATTTGTATATATGAATGATTCAATAGAAACTTGATAATTTCAGGTTAGAGAAAACTTAGAATGTGAAAAAACTCCTGGTTTGCTTGACCATTGATCCTAATAGTATGTATACCTTCTATTACAACCCCTTTGTTGGTAATATTTCTGCTTTAGCCCTTCTGGAAAAGGGATTAAGGCTTTTAGTCTTTCATGCTTACTTTCTTACAGATTCTGTAATTGTTGGATAAAATATTATAGAATTCACG

Coding sequence (CDS)

ATGGCGTTCTCTTCGATTACCATGAAATGCCCCCCTGTTCTTCACCTGCGAGCCCTTCCTAAAAGTTCTGTACCTCAAAGTTCAATTTTCTTTCGATATTCACCTACGAGATTCAGCCGAAGAAAATCCTTATCGATTCGATCGGTTTCGGTCCCAGCTGCGCCAGCATCTGAGGGTATAGCACCGGCTATCTCATTAACTGATAATGCATTGAAACACTTGAATAAGATGAGATCTGAACGTAATGAAGATTTATGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCCTACACTATGGAGTTTGAGAACAGGGCAAATGCTAGACCTGATGACTCAATTATAGAATACAACGGTTTTGTGATTGTATGTGATCCAAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGTGACGCACTTATTGGTGGGGGCTTCTCTTTCAAGAATCCAAATGCTACACAAACATGTGGTTGTGGGAAATCATTTGCTGCAGAAATGTAG

Protein sequence

MAFSSITMKCPPVLHLRALPKSSVPQSSIFFRYSPTRFSRRKSLSIRSVSVPAAPASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM

Homology

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BLAST of ClCG01G015990 vs. NCBI nr
Match: XP_022950286.1 (iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita moschata] >XP_023544833.1 iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6604246.1 Iron-sulfur assembly protein IscA, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 339.7 bits (870), Expect = 1.4e-89
Identity = 168/172 (97.67%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSVPQSSIFFRYSPTRFSRRKSLSIRSVSVPAAPASEGI 60
           MAFSSITMKCPPVLHLRALPKSS PQSSI FRYSPT+FSRRK+LSIRSVSVPAAPASEGI
Sbjct: 1   MAFSSITMKCPPVLHLRALPKSSAPQSSISFRYSPTKFSRRKTLSIRSVSVPAAPASEGI 60

Query: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120

Query: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173
           NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM
Sbjct: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 172

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BLAST of ClCG01G015990 vs. NCBI nr
Match: KAG7034403.1 (Iron-sulfur assembly protein IscA, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 338.2 bits (866), Expect = 4.2e-89
Identity = 167/172 (97.09%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSVPQSSIFFRYSPTRFSRRKSLSIRSVSVPAAPASEGI 60
           MAFSSIT+KCPPVLHLRALPKSS PQSSI FRYSPT+FSRRK+LSIRSVSVPAAPASEGI
Sbjct: 1   MAFSSITVKCPPVLHLRALPKSSAPQSSISFRYSPTKFSRRKTLSIRSVSVPAAPASEGI 60

Query: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120

Query: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173
           NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM
Sbjct: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 172

[Close]

BLAST of ClCG01G015990 vs. NCBI nr
Match: XP_022977954.1 (iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 334.7 bits (857), Expect = 4.6e-88
Identity = 166/172 (96.51%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSVPQSSIFFRYSPTRFSRRKSLSIRSVSVPAAPASEGI 60
           MAFSSITMKCPPVLHLRALPKSS PQSSI FRYSPT+FSRRK+LSIRSVSVPAAPASEGI
Sbjct: 1   MAFSSITMKCPPVLHLRALPKSSAPQSSISFRYSPTKFSRRKTLSIRSVSVPAAPASEGI 60

Query: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENR NARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRENARPDDSIIEY 120

Query: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173
           N FVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM
Sbjct: 121 NEFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 172

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BLAST of ClCG01G015990 vs. NCBI nr
Match: XP_038880838.1 (iron-sulfur assembly protein IscA, chloroplastic [Benincasa hispida])

HSP 1 Score: 333.2 bits (853), Expect = 1.3e-87
Identity = 164/172 (95.35%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSVPQSSIFFRYSPTRFSRRKSLSIRSVSVPAAPASEGI 60
           MAFSSITMKC P+LHLRALP+SS PQSSI FRYSPT+FSRRKSLSIRSVSVPAAPA+EGI
Sbjct: 1   MAFSSITMKCTPILHLRALPQSSAPQSSISFRYSPTKFSRRKSLSIRSVSVPAAPATEGI 60

Query: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120

Query: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173
           NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAE+
Sbjct: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEV 172

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BLAST of ClCG01G015990 vs. NCBI nr
Match: XP_008440129.1 (PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 1.6e-85
Identity = 163/172 (94.77%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSVPQSSIFFRYSPTRFSRRKSLSIRSVSVPAAPASEGI 60
           MAFSSITMK PPVLHLRALPKSS PQSSI FR+SPT+FSR KSLSIRSVSVPAAPASE I
Sbjct: 1   MAFSSITMKFPPVLHLRALPKSSAPQSSISFRFSPTKFSRSKSLSIRSVSVPAAPASESI 60

Query: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           APAISLTDNALKHLNKMRSER+EDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERDEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120

Query: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173
           NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 172

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BLAST of ClCG01G015990 vs. ExPASy Swiss-Prot
Match: Q9XIK3 (Iron-sulfur assembly protein IscA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISCA PE=2 SV=2)

HSP 1 Score: 243.4 bits (620), Expect = 1.8e-63
Identity = 121/155 (78.06%), Postives = 132/155 (85.16%), Query Frame = 0


Query: 21  KSSVPQSSIFF---RYSPTRFSRRKSLSIRSVSVPAAPASEGIAPAISLTDNALKHLNKM 80
           +S V  +SI F    Y     +RR  LS+RS SVPAAPA EG+ PAISL++NALKHL+KM
Sbjct: 26  RSVVSCNSISFPSLSYVNLNLNRRNRLSVRSASVPAAPAMEGLKPAISLSENALKHLSKM 85

Query: 81  RSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFG 140
           RSER EDLCLRIGV+QGGCSGMSYTM+FENRANARPDDS IEY GF IVCDPKS+LFLFG
Sbjct: 86  RSERGEDLCLRIGVKQGGCSGMSYTMDFENRANARPDDSTIEYQGFTIVCDPKSMLFLFG 145

Query: 141 MQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173
           MQLDYSDALIGGGFSF NPNATQTCGCGKSFAAEM
Sbjct: 146 MQLDYSDALIGGGFSFSNPNATQTCGCGKSFAAEM 180

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BLAST of ClCG01G015990 vs. ExPASy Swiss-Prot
Match: P72731 (Uncharacterized protein slr1417 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1417 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.3e-36
Identity = 68/108 (62.96%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           A  I L+D ALKHL  ++ ++ +DLCLR+GVRQGGCSGMSY M+FE    A   D + +Y
Sbjct: 9   AKGIQLSDAALKHLLALKEQQGKDLCLRVGVRQGGCSGMSYMMDFEEPNRATEHDEVFDY 68

Query: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF 169
            GF I+CD KSLL+L+G+ LDYS+ALIGGGF F NPNA QTCGCGKSF
Sbjct: 69  EGFQIICDRKSLLYLYGLMLDYSNALIGGGFQFTNPNANQTCGCGKSF 116

[Close]

BLAST of ClCG01G015990 vs. ExPASy Swiss-Prot
Match: P51217 (Uncharacterized protein ycf83 OS=Porphyra purpurea OX=2787 GN=ycf83 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.7e-32
Identity = 59/106 (55.66%), Postives = 83/106 (78.30%), Query Frame = 0


Query: 64  ISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGF 123
           I+LT+ A + +  ++S  + ++CLRIGV+QGGCSGMSY+M FE+ ++ R  D ++  + F
Sbjct: 8   ITLTEPAARQIKILKSNFDNEVCLRIGVKQGGCSGMSYSMNFESVSSLRETDEVLMLDSF 67

Query: 124 VIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFA 170
           ++ CDPKSLL+L+G+ LDYS  LIGGGF F NPNA+QTCGCGKSF+
Sbjct: 68  LVACDPKSLLYLYGLSLDYSSELIGGGFQFSNPNASQTCGCGKSFS 113

[Close]

BLAST of ClCG01G015990 vs. ExPASy Swiss-Prot
Match: Q1XDR9 (Uncharacterized protein ycf83 OS=Pyropia yezoensis OX=2788 GN=ycf83 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-30
Identity = 61/112 (54.46%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 58  EGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSI 117
           EG    I++T  ALK +  ++++   D+ LRIGVRQGGCSGMSY+M FE+    +  D  
Sbjct: 2   EGNMGFITITKPALKQIAILKNDHENDVHLRIGVRQGGCSGMSYSMNFEHVDKLKDTDER 61

Query: 118 IEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFA 170
           +  + F +VCDPKSLL+L+G+ LD+S  LIGGGF F NPNA+QTCGCGKSF+
Sbjct: 62  LRLDNFSVVCDPKSLLYLYGLSLDFSSELIGGGFQFSNPNASQTCGCGKSFS 113

[Close]

BLAST of ClCG01G015990 vs. ExPASy Swiss-Prot
Match: Q9MSA1 (Uncharacterized protein ycf83 OS=Galdieria sulphuraria OX=130081 GN=ycf83 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.8e-30
Identity = 58/107 (54.21%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 64  ISLTDNALKHLNKMRSERNED-LCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNG 123
           I++T +AL HLN +    +ED L +RIG++QGGCSG+SY M +E ++N   +D + +Y+ 
Sbjct: 6   INITKSALDHLNSISKLNSEDKLYIRIGIKQGGCSGLSYFMTYEKKSNISDNDLVYDYDN 65

Query: 124 FVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFA 170
           F +VCD KS+L+L+G+ LDYS +LI GGF F NPNA QTCGCGKSF+
Sbjct: 66  FTLVCDNKSILYLYGISLDYSSSLIDGGFKFLNPNAKQTCGCGKSFS 112

[Close]

BLAST of ClCG01G015990 vs. ExPASy TrEMBL
Match: A0A6J1GEF0 (iron-sulfur assembly protein IscA, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453419 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 7.0e-90
Identity = 168/172 (97.67%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSVPQSSIFFRYSPTRFSRRKSLSIRSVSVPAAPASEGI 60
           MAFSSITMKCPPVLHLRALPKSS PQSSI FRYSPT+FSRRK+LSIRSVSVPAAPASEGI
Sbjct: 1   MAFSSITMKCPPVLHLRALPKSSAPQSSISFRYSPTKFSRRKTLSIRSVSVPAAPASEGI 60

Query: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120

Query: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173
           NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM
Sbjct: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 172

[Close]

BLAST of ClCG01G015990 vs. ExPASy TrEMBL
Match: A0A6J1ISS5 (iron-sulfur assembly protein IscA, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478089 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.2e-88
Identity = 166/172 (96.51%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSVPQSSIFFRYSPTRFSRRKSLSIRSVSVPAAPASEGI 60
           MAFSSITMKCPPVLHLRALPKSS PQSSI FRYSPT+FSRRK+LSIRSVSVPAAPASEGI
Sbjct: 1   MAFSSITMKCPPVLHLRALPKSSAPQSSISFRYSPTKFSRRKTLSIRSVSVPAAPASEGI 60

Query: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENR NARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRENARPDDSIIEY 120

Query: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173
           N FVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM
Sbjct: 121 NEFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 172

[Close]

BLAST of ClCG01G015990 vs. ExPASy TrEMBL
Match: A0A1S3B105 (iron-sulfur assembly protein IscA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484688 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 8.0e-86
Identity = 163/172 (94.77%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSVPQSSIFFRYSPTRFSRRKSLSIRSVSVPAAPASEGI 60
           MAFSSITMK PPVLHLRALPKSS PQSSI FR+SPT+FSR KSLSIRSVSVPAAPASE I
Sbjct: 1   MAFSSITMKFPPVLHLRALPKSSAPQSSISFRFSPTKFSRSKSLSIRSVSVPAAPASESI 60

Query: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           APAISLTDNALKHLNKMRSER+EDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERDEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120

Query: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173
           NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 172

[Close]

BLAST of ClCG01G015990 vs. ExPASy TrEMBL
Match: A0A6J1BTR2 (iron-sulfur assembly protein IscA, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005271 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.8e-83
Identity = 158/172 (91.86%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSVPQSSIFFRYSPTRFSRRKSLSIRSVSVPAAPASEGI 60
           MAFSS TMK P VLHLRALP+SS  QSSI FRYS T+FSRRKSLS+RSVSVPAAP SEGI
Sbjct: 1   MAFSSATMKFPSVLHLRALPESSATQSSISFRYSLTKFSRRKSLSVRSVSVPAAPTSEGI 60

Query: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           APAISLTDNAL HLNKMRS+RNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY
Sbjct: 61  APAISLTDNALNHLNKMRSDRNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120

Query: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173
           NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAA+M
Sbjct: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAADM 172

[Close]

BLAST of ClCG01G015990 vs. ExPASy TrEMBL
Match: A0A0A0KJ66 (Fe-S_biosyn domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486950 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.8e-82
Identity = 159/174 (91.38%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 1   MAFSSITMK--CPPVLHLRALPKSSVPQSSIFFRYSPTRFSRRKSLSIRSVSVPAAPASE 60
           MAFSSI+MK  CPPVLHL ALPKS  PQ+SI FR+  T+FSRRKSLSIRSVSVPAAPASE
Sbjct: 1   MAFSSISMKCPCPPVLHLPALPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPASE 60

Query: 61  GIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSII 120
           GIAPAISLTD ALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFE+RANARPDDSII
Sbjct: 61  GIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSII 120

Query: 121 EYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173
           EYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 EYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 174

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BLAST of ClCG01G015990 vs. TAIR 10
Match: AT1G10500.1 (chloroplast-localized ISCA-like protein )

HSP 1 Score: 243.4 bits (620), Expect = 1.3e-64
Identity = 121/155 (78.06%), Postives = 132/155 (85.16%), Query Frame = 0


Query: 21  KSSVPQSSIFF---RYSPTRFSRRKSLSIRSVSVPAAPASEGIAPAISLTDNALKHLNKM 80
           +S V  +SI F    Y     +RR  LS+RS SVPAAPA EG+ PAISL++NALKHL+KM
Sbjct: 26  RSVVSCNSISFPSLSYVNLNLNRRNRLSVRSASVPAAPAMEGLKPAISLSENALKHLSKM 85

Query: 81  RSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFG 140
           RSER EDLCLRIGV+QGGCSGMSYTM+FENRANARPDDS IEY GF IVCDPKS+LFLFG
Sbjct: 86  RSERGEDLCLRIGVKQGGCSGMSYTMDFENRANARPDDSTIEYQGFTIVCDPKSMLFLFG 145

Query: 141 MQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 173
           MQLDYSDALIGGGFSF NPNATQTCGCGKSFAAEM
Sbjct: 146 MQLDYSDALIGGGFSFSNPNATQTCGCGKSFAAEM 180

[Close]

BLAST of ClCG01G015990 vs. TAIR 10
Match: AT5G03905.1 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 81.6 bits (200), Expect = 6.6e-16
Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 0


Query: 38  FSRRKSLSIRSVSVPAAPASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCS 97
           FS   ++   S S  + P S      + L+DN ++ + +++S   E   LR+GV  GGCS
Sbjct: 26  FSSASAIKEASSSSSSQPESSS-NDVVHLSDNCIRRMKELQSSEPEKKMLRLGVETGGCS 85

Query: 98  GMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFK-NP 157
           G  Y  E +NR N  PDD + E NG  +V D  S   + G  +DY + LI   F    NP
Sbjct: 86  GFQYKFELDNRTN--PDDRVFEKNGVKLVVDNVSYDLVKGATIDYEEELIRAAFVVAVNP 145

Query: 158 NATQTCGCGKSFAAEM 173
           +A   C C  SF  ++
Sbjct: 146 SAVGGCSCKSSFMVKL 158

[Close]

BLAST of ClCG01G015990 vs. TAIR 10
Match: AT2G36260.1 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-12
Identity = 34/105 (32.38%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 64  ISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGF 123
           ++L+D A   + ++   + +   LR+ V   GC+G+SY + +         D ++E  G 
Sbjct: 6   LALSDTAAARIRQLLQHQQKPF-LRLAVEAKGCNGLSYVLNYAQEKG--KFDEVVEEKGV 65

Query: 124 VIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF 169
            I+ DPK+++ + G ++D+ D  +   F F NPNAT+ CGCG+SF
Sbjct: 66  KILVDPKAVMHVIGTEMDFVDDKLRSEFVFVNPNATK-CGCGESF 106

The following BLAST results are available for this feature:

BLAST of ClCG01G015990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950286.1	1.4e-89	97.67	iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita moschata] >XP_0...	[more]
KAG7034403.1	4.2e-89	97.09	Iron-sulfur assembly protein IscA, chloroplastic [Cucurbita argyrosperma subsp. ...	[more]
XP_022977954.1	4.6e-88	96.51	iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita maxima]	[more]
XP_038880838.1	1.3e-87	95.35	iron-sulfur assembly protein IscA, chloroplastic [Benincasa hispida]	[more]
XP_008440129.1	1.6e-85	94.77	PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Cucumis melo]	[more]

BLAST of ClCG01G015990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIK3	1.8e-63	78.06	Iron-sulfur assembly protein IscA, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P72731	3.3e-36	62.96	Uncharacterized protein slr1417 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]
P51217	3.7e-32	55.66	Uncharacterized protein ycf83 OS=Porphyra purpurea OX=2787 GN=ycf83 PE=3 SV=1	[more]
Q1XDR9	1.6e-30	54.46	Uncharacterized protein ycf83 OS=Pyropia yezoensis OX=2788 GN=ycf83 PE=3 SV=1	[more]
Q9MSA1	7.8e-30	54.21	Uncharacterized protein ycf83 OS=Galdieria sulphuraria OX=130081 GN=ycf83 PE=3 S...	[more]

BLAST of ClCG01G015990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEF0	7.0e-90	97.67	iron-sulfur assembly protein IscA, chloroplastic-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1ISS5	2.2e-88	96.51	iron-sulfur assembly protein IscA, chloroplastic-like OS=Cucurbita maxima OX=366...	[more]
A0A1S3B105	8.0e-86	94.77	iron-sulfur assembly protein IscA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1BTR2	4.8e-83	91.86	iron-sulfur assembly protein IscA, chloroplastic isoform X1 OS=Momordica charant...	[more]
A0A0A0KJ66	1.8e-82	91.38	Fe-S_biosyn domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486950...	[more]

BLAST of ClCG01G015990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10500.1	1.3e-64	78.06	chloroplast-localized ISCA-like protein	[more]
AT5G03905.1	6.6e-16	34.56	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G36260.1	1.5e-12	32.38	Iron-sulphur cluster biosynthesis family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016092	FeS cluster insertion protein	TIGRFAM	TIGR00049	TIGR00049	coord: 64..169 e-value: 2.8E-37 score: 125.1
IPR000361	FeS cluster biogenesis	PFAM	PF01521	Fe-S_biosyn	coord: 64..166 e-value: 4.5E-22 score: 78.3
IPR035903	HesB-like domain superfamily	GENE3D	2.60.300.12		coord: 63..171 e-value: 1.4E-35 score: 123.7
IPR035903	HesB-like domain superfamily	SUPERFAMILY	89360	HesB-like domain	coord: 63..159
None	No IPR available	PANTHER	PTHR47265:SF1	IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC	coord: 1..172
IPR031108	FeS assembly protein IscA, plant/cyanobacteria type	PANTHER	PTHR47265	IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC	coord: 1..172
IPR017870	FeS cluster insertion, C-terminal, conserved site	PROSITE	PS01152	HESB	coord: 151..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G015990.1	ClCG01G015990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0030674	protein-macromolecule adaptor activity