ClCG01G015960 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG01G015960
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionprotein SLOW GREEN 1, chloroplastic
LocationCG_Chr01: 30295462 .. 30298501 (-)
RNA-Seq ExpressionClCG01G015960
SyntenyClCG01G015960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCAACATCAGCTTTCTCAGTCCTCTCTCAACTTGAACTTCCCGGACCTAAATCCTCAAGCTACAATGTCCGGGCATTGCCTAAATGTCGATTAAGCATTCTTCGGAAGAATTACAAACCAACCTCCCAAAGCTTGTTTTATTCAGCTGCGAAAATTTTTCATTCCCCCATTCACAATCCTCCCTTCTCAAACCTCCCTGAGTCCGATATATGTCGTTCTACCTCACCCCAGATAAAAATTTCCACATATTTCGTTGAAAGATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATACGCCAGGGCATTGCCTGCTCAGACAAGCAGCAAAAACCCAACATTGGCTGAAAAAGCTCAAGCTCCAGAAGAGGATAGTGAAGAGGAGATGAGGGAGAGGATCTTGGAGCATGATCCAACTAATATTGATACTCTGAAATCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCGGATGAGGTTGAATGGAAGCTTTTGTTGGCTCTTTGCTATGAGACATTGGGGCAGCTGGACACGGCAAAAAGATTGTTCATGGAAATTTTGGAGAAGAAACCTCTGTTGGTTAGAGCTTTGCATGTAAGATTTTTCCTTGACTGTGATAGGAAAATAGATTTATGTTTCTTTAGACTGGTAGTTTATTTTATGTCATGTGGTGTGAGTTCAAGTTGGAAATTTTAGTGTACTGGCTTAAATGAAGTTGATATCAGTATACAAAACCAATGTGATGTTTGCCTTAGAGATTTTATTGGGAAAAATTGAATACTGAACTTACCGAAGGCGGTTACTAACAAGATGAATTCTTATTATTGAAAGTGTCGTTAAGACACAAGCTTTTTAGCAAGAACTCATAGGAAATGACTTCTAGAGAACAGTTGATATGGCTTTTTTCCTGTAGTTTTATTTGAGCTTGAATTATTTCATCAAGCTCACAAAATTTTCTGAATATATTGTAGTCGTGAAGGCAATTTATATTCTTCAGTCCCATGTGTGATATTCAGGCATAGTATAAGAGAATTGCCTTCGAATCCTTTTAATCCCTCAGGGGAAGATACTGATTAATATGTTAGTATGTAATAAACACTTTAATATTGTCATCTCGTCTGTGGGCTGCCTTGCTATCTTGGAAGCTGCAACCTTTTATAGCTTTCCCCAATATCTTTAAGAAGGTATGTCAATGCTTAATTTGAAACTTTCAATTTGCACTTTCTTCAGGGTTTGGCGTTAGTGATGCATAAGAACAACGAAGGTCAATCTGTGTTTGAGATGCTCAATAAGGCTCTAGATTTTGCTTGTGATGAGAAAAAACTTACTGAGATGAGGAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGTCATTTGCTATTTATATTTAGAGTTTGTTTGGATTGACTTTCTAAGTGCTTAGAAATGCTTCTTTTTTGTACTTAAAAAATCTTTTTTCAGCACTTAGAAAATCAATCTATATGGGCCTTTTTATGTTCCATGTTTGAATCTGTAACTTTTTGGTTGAGTCCATGTTTTTCTTTCTCACTATGTTCAACCTATGGGGGTTTCCTGCTTCTTAAACTGGATCCATTTACGTAGAAGGGTGCAAATGTTTGGATGACTTGTATTGGAAACTTATCTGTCTAGCTGGCTGTGGTTATATGCATTAGAATTACTCCAAAATGTTGTTAGACTAAAGTTATAAAAGGGTGGATTGTATATTGACAAGCACAAGATAAAAAATGTCATTATGTAATCCTATTTTTTGGGTCTAAGCGGTGTAATCCTCAAGGTATTCTAAAGTTTGACAAGCACAAGATAAAAAATGTCATTATGTATTCCTATTTTTTGGGTCTAGACATTGTAATCGTTGACGTGTTCTAAAGTTTATTTCTGATCGATACTGTTTCATGGGTAAAGGCGTAAAGCTAAGATTTTGCTGGCCACTGGTCAGACAGATTGCTTGAAATGCTAGAGAGAAATGACAACTTTTATGGAAATGTGGAGATGGCAATGACAATTTAGATCTGGCTTGTTATGTAGCCTCTAGATAGAGTTCTTTCTCTTGCTTTGTAAAATCAATCGTTTTTTTTCATTAATTGATTAGCAATTATTGAGCTTTTTTGCAATTATATTGAATCTTCAAGTATTGGAGAATTTCTAATTTTCCACCTTGATTCTCTGGATTCTTGCCCAACAAAGTATTTATGTCTTTCAGGGGGAACTGGAAGAGGGCTTGAAGAAGTTTCAGGATCTTGTTGATGAAAACCCAAGGGATTTTCGACCCTATCTTTGCCAGGTTCCGACATATTTGCAGACTTCCTACCTCTTTTATCATAATTTTGATTAAGCCATCTCCACACTACATGTTTAATGCCCCAGCTTACCAGGCTACTTATGTGTCACATAAATATGGAGGAAATTCTACTTTTTCTTTCTCAAGAACTCGTAAGGATGTTTTAAGACTGTTAGCATTCATTTCAACCAAAAGAAAAATCTGCACTACAGATATGGTTGTTTGCACTTGGCACATTGATTGTATGTTATAGGTTTGGTTCAACTGAATAATATGAATAGAGAATTGATGAGTGGGAACAGTAAGATAAAAATGAAAGTAGATCTCGGAAGAAGGTTCCGGCCCTTAAGATTTAGCCAAGCATCTTATAGTAAGAAAAATGTAATGACTTGGCTTATTGAAGAGGACAATTGTCTTTGGGGGCGAGGATGAAATACTGAAATGAATGATATCTAACTATATGCATTTCTTGCAGGGAATAATATACAGTCTGATGGACAAAAAAAAGGAAGCTGCAGAGCAGTTTGCGACGTATCAGGCCCTTGTACCTGATGAATTTCCTCAAAGGGAATTTATCGACGATGTCATGTTGTCAGCTACAACTGCTTCACGGGAACAGTTTCAGAAGGAATTTGATGCTGAATTTACGCACAAGAAGTAA

mRNA sequence

ATGGGTTCAACATCAGCTTTCTCAGTCCTCTCTCAACTTGAACTTCCCGGACCTAAATCCTCAAGCTACAATGTCCGGGCATTGCCTAAATGTCGATTAAGCATTCTTCGGAAGAATTACAAACCAACCTCCCAAAGCTTGTTTTATTCAGCTGCGAAAATTTTTCATTCCCCCATTCACAATCCTCCCTTCTCAAACCTCCCTGAGTCCGATATATGTCGTTCTACCTCACCCCAGATAAAAATTTCCACATATTTCGTTGAAAGATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATACGCCAGGGCATTGCCTGCTCAGACAAGCAGCAAAAACCCAACATTGGCTGAAAAAGCTCAAGCTCCAGAAGAGGATAGTGAAGAGGAGATGAGGGAGAGGATCTTGGAGCATGATCCAACTAATATTGATACTCTGAAATCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCGGATGAGGTTGAATGGAAGCTTTTGTTGGCTCTTTGCTATGAGACATTGGGGCAGCTGGACACGGCAAAAAGATTGTTCATGGAAATTTTGGAGAAGAAACCTCTGTTGGTTAGAGCTTTGCATGGTTTGGCGTTAGTGATGCATAAGAACAACGAAGGTCAATCTGTGTTTGAGATGCTCAATAAGGCTCTAGATTTTGCTTGTGATGAGAAAAAACTTACTGAGATGAGGAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGGGAACTGGAAGAGGGCTTGAAGAAGTTTCAGGATCTTGTTGATGAAAACCCAAGGGATTTTCGACCCTATCTTTGCCAGGGAATAATATACAGTCTGATGGACAAAAAAAAGGAAGCTGCAGAGCAGTTTGCGACGTATCAGGCCCTTGTACCTGATGAATTTCCTCAAAGGGAATTTATCGACGATGTCATGTTGTCAGCTACAACTGCTTCACGGGAACAGTTTCAGAAGGAATTTGATGCTGAATTTACGCACAAGAAGTAA

Coding sequence (CDS)

ATGGGTTCAACATCAGCTTTCTCAGTCCTCTCTCAACTTGAACTTCCCGGACCTAAATCCTCAAGCTACAATGTCCGGGCATTGCCTAAATGTCGATTAAGCATTCTTCGGAAGAATTACAAACCAACCTCCCAAAGCTTGTTTTATTCAGCTGCGAAAATTTTTCATTCCCCCATTCACAATCCTCCCTTCTCAAACCTCCCTGAGTCCGATATATGTCGTTCTACCTCACCCCAGATAAAAATTTCCACATATTTCGTTGAAAGATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATACGCCAGGGCATTGCCTGCTCAGACAAGCAGCAAAAACCCAACATTGGCTGAAAAAGCTCAAGCTCCAGAAGAGGATAGTGAAGAGGAGATGAGGGAGAGGATCTTGGAGCATGATCCAACTAATATTGATACTCTGAAATCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCGGATGAGGTTGAATGGAAGCTTTTGTTGGCTCTTTGCTATGAGACATTGGGGCAGCTGGACACGGCAAAAAGATTGTTCATGGAAATTTTGGAGAAGAAACCTCTGTTGGTTAGAGCTTTGCATGGTTTGGCGTTAGTGATGCATAAGAACAACGAAGGTCAATCTGTGTTTGAGATGCTCAATAAGGCTCTAGATTTTGCTTGTGATGAGAAAAAACTTACTGAGATGAGGAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGGGAACTGGAAGAGGGCTTGAAGAAGTTTCAGGATCTTGTTGATGAAAACCCAAGGGATTTTCGACCCTATCTTTGCCAGGGAATAATATACAGTCTGATGGACAAAAAAAAGGAAGCTGCAGAGCAGTTTGCGACGTATCAGGCCCTTGTACCTGATGAATTTCCTCAAAGGGAATTTATCGACGATGTCATGTTGTCAGCTACAACTGCTTCACGGGAACAGTTTCAGAAGGAATTTGATGCTGAATTTACGCACAAGAAGTAA

Protein sequence

MGSTSAFSVLSQLELPGPKSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHSPIHNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTSSKNPTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEMLNKALDFACDEKKLTEMRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTHKK
Homology
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BLAST of ClCG01G015960 vs. NCBI nr
Match: XP_038880966.1 (protein SLOW GREEN 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 612.8 bits (1579), Expect = 1.8e-171
Identity = 318/358 (88.83%), Postives = 333/358 (93.02%), Query Frame = 0 

Query: 3   STSAFSVLSQLE-LPGPKSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHSPIHN 62
           STSAFSV SQ+E L GPK SSYNVRALP CR SIL+KN+KPTSQSLFYSAAK FHSPIHN
Sbjct: 5   STSAFSVSSQIELLHGPKFSSYNVRALPNCRFSILQKNHKPTSQSLFYSAAKNFHSPIHN 64

Query: 63  PPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTSSKNP 122
           PPFSNL ESDI RSTS QIKI  ++VERFVGFLVGSFIFMGCFNVRYARALP QTSSKNP
Sbjct: 65  PPFSNLSESDIRRSTSTQIKIHKHYVERFVGFLVGSFIFMGCFNVRYARALPTQTSSKNP 124

Query: 123 TLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEP 182
           T+AEK+QA EEDSEEEMRERILEHDP+NIDTLK+VLYGKMRSGKTEEAIKYVKRLIDLEP
Sbjct: 125 TMAEKSQALEEDSEEEMRERILEHDPSNIDTLKAVLYGKMRSGKTEEAIKYVKRLIDLEP 184

Query: 183 DEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEML 242
           DEVEW+LLLAL YET GQLDTAK LFMEILEKKPLLVRALHGLALVMHKNNEG+SVFEML
Sbjct: 185 DEVEWRLLLALYYETFGQLDTAKTLFMEILEKKPLLVRALHGLALVMHKNNEGESVFEML 244

Query: 243 NKALDFACDEKKLTEMRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGII 302
           NKAL  A DEKKLTE RSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGII
Sbjct: 245 NKALAIARDEKKLTEQRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGII 304

Query: 303 YSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTHKK 360
           YSL+DKKKEAAEQF  Y+ALVPDEFPQREFIDDV+L+A TASREQFQKEFDAEF HKK
Sbjct: 305 YSLLDKKKEAAEQFEAYRALVPDEFPQREFIDDVVLAAMTASREQFQKEFDAEFMHKK 362

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BLAST of ClCG01G015960 vs. NCBI nr
Match: XP_004141968.1 (protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KGN48419.1 hypothetical protein Csa_003836 [Cucumis sativus])

HSP 1 Score: 596.3 bits (1536), Expect = 1.8e-166
Identity = 310/362 (85.64%), Postives = 333/362 (91.99%), Query Frame = 0 

Query: 1   MGSTSA--FSVLSQLELP-GPKSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHS 60
           MGSTSA  FSV SQ+ELP  PK SSYNVRAL KC+ +IL+KNYK +SQSLF S AKIFHS
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  PIHNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTS 120
           PIHN PFSNL ESDI R  SPQIKIS YF+E+FVGFLVGSFIFMGCFNVRY RALPAQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 SKNPTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLI 180
           +KNP LAEKAQ PEEDSEE M ERILEHDP+N+DTLK+VLYGKMRSGKTE A+KYVKRLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNNEGQSV 240
           DLEPDEVEW++LLALCYE LG+L TAKRLFMEIL++KPLLVRALHGLALVMHKNNEG+SV
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDFACDEKKLTEMRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLC 300
           FEMLNKALD A DEKKLTE RSIGILIAQMHVVKGELEEGLKKFQ+LV+ENPRDFRP+LC
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTH 360
           QGIIYSL+DKKKEAAEQF TYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFT+
Sbjct: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360

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BLAST of ClCG01G015960 vs. NCBI nr
Match: XP_008440127.1 (PREDICTED: LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic [Cucumis melo] >TYK12974.1 protein SLOW GREEN 1 [Cucumis melo var. makuwa])

HSP 1 Score: 590.5 bits (1521), Expect = 9.8e-165
Identity = 311/358 (86.87%), Postives = 331/358 (92.46%), Query Frame = 0 

Query: 3   STSAFSVLSQLELPG-PKSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHSPIHN 62
           STSAFSV SQ+ELPG PK SSYNVRAL   R SIL+KNYK +SQSLFYS  KIFHSPIHN
Sbjct: 5   STSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYS-PKIFHSPIHN 64

Query: 63  PPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTSSKNP 122
             FSNL ESDI RSTSPQIK+S Y VE+FVGFLVGSFIFMGCFN+RYARALPAQTSSKNP
Sbjct: 65  TLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTSSKNP 124

Query: 123 TLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEP 182
           TLAEKAQ PE DS EEM ERILEHDP+N+DTLK+VLYGKMRSGKTEEAIKYVKRLIDLEP
Sbjct: 125 TLAEKAQIPEGDS-EEMWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLIDLEP 184

Query: 183 DEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEML 242
           DEVEW+LLLALCYETLG+L TAKRLFMEIL++KPLLVRALHGLALVMHKNNEG+SVFEML
Sbjct: 185 DEVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFEML 244

Query: 243 NKALDFACDEKKLTEMRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGII 302
           NKALD A DEKKL E RSIGILIAQMHVVKGELEEGLKKFQ+LV+ENPRDFRP+LCQGII
Sbjct: 245 NKALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGII 304

Query: 303 YSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTHKK 360
           YSL+DKKKEAAEQF  YQALVPDEFPQREFIDD+MLSATTASREQFQKEFDAEFT+KK
Sbjct: 305 YSLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTNKK 360

[Close]
BLAST of ClCG01G015960 vs. NCBI nr
Match: XP_022132537.1 (protein SLOW GREEN 1, chloroplastic [Momordica charantia])

HSP 1 Score: 537.0 bits (1382), Expect = 1.3e-148
Identity = 277/357 (77.59%), Postives = 305/357 (85.43%), Query Frame = 0 

Query: 3   STSAFSVLSQLELPGPKSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHSPIHNP 62
           STSAF V SQ+ LPGPK SSYNVR  P  R   LRKNY         + AK FH P  NP
Sbjct: 5   STSAFLVCSQIILPGPKVSSYNVRKSPNSRFIGLRKNYN--------AVAKFFHFPTLNP 64

Query: 63  PFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTSSKNPT 122
           P S L ESD CRS+  Q  +S YF+E+FV  L+GSFIFMGCFNVRYA ALPAQ SSK+PT
Sbjct: 65  PVSKLSESDSCRSSPSQRNLSKYFLEKFVALLIGSFIFMGCFNVRYAMALPAQRSSKSPT 124

Query: 123 LAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEPD 182
           L EK     EDSEEEMRERILEH+P NIDTLK+VLYGKMRSGKT+EAIKYV+RLIDLEP+
Sbjct: 125 LDEKTDTLSEDSEEEMRERILEHEPRNIDTLKAVLYGKMRSGKTKEAIKYVQRLIDLEPE 184

Query: 183 EVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEMLN 242
           EVEW+LL+ALCYET+GQLDTAKRLFMEILEKKPLLVRALHGLALVMHKN EGQSVF+MLN
Sbjct: 185 EVEWRLLMALCYETMGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNKEGQSVFDMLN 244

Query: 243 KALDFACDEKKLTEMRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGIIY 302
           KALD A DEKK+TE RSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGIIY
Sbjct: 245 KALDIARDEKKVTEQRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGIIY 304

Query: 303 SLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTHKK 360
           SL+DKK+EAAEQF  Y+A+VPDEFPQ+EFIDD++LSATTASREQF+KEF AEF++KK
Sbjct: 305 SLLDKKREAAEQFEMYRAVVPDEFPQKEFIDDIVLSATTASREQFEKEFAAEFSYKK 353

[Close]
BLAST of ClCG01G015960 vs. NCBI nr
Match: XP_022963051.1 (protein SLOW GREEN 1, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 528.5 bits (1360), Expect = 4.6e-146
Identity = 275/359 (76.60%), Postives = 307/359 (85.52%), Query Frame = 0 

Query: 1   MGSTSAFSVLSQLELPGPKSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHSPIH 60
           MGS SAFSV S++ELPGPK S YNVR  PK R ++ RKNY PTS+SL +S +K F+S IH
Sbjct: 1   MGSISAFSVCSKIELPGPKFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNSHIH 60

Query: 61  NPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTSSKN 120
           + PFSNL ESD     + Q   S YFVE+ VGFLV  FIFMGCFNVR+  ALPAQTS K+
Sbjct: 61  DAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTSGKS 120

Query: 121 PTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLE 180
           PT+       +EDSEEEMRERILEHD  NIDTLK+VLYGKM SGKTEEAIKYV RLIDLE
Sbjct: 121 PTM-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLE 180

Query: 181 PDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEM 240
           PDEVEW+LLLALCYE +G+L+ AK LF+EILEK PLLVRALHGLALVMHKNNEGQSVFEM
Sbjct: 181 PDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSVFEM 240

Query: 241 LNKALDFACDEKKLTEMRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGI 300
           LNKALD A D KK+TE RSIGILIAQMHVVKGELEEGLKKFQ+LV+ENPRDFRPYLCQGI
Sbjct: 241 LNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGI 300

Query: 301 IYSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTHKK 360
           IYSL+D+K+EAAEQF TY+ALVPDEFPQREF+DDVMLSATTA+REQFQKEFDAEF++KK
Sbjct: 301 IYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYKK 352

[Close]
BLAST of ClCG01G015960 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.0e-40
Identity = 103/295 (34.92%), Postives = 168/295 (56.95%), Query Frame = 0 

Query: 44  SQSLFYSAAKIFHSPIHNPPFSNLPESDI----CRSTSPQIKISTYFVERFVGF-----L 103
           S SL  S   +  +P+  P    +P  D+     R++S Q      F E+F  F     L
Sbjct: 8   SSSLVSSFVAVKATPVTGP---LIPRRDLLSIRIRASSNQNSSGYCFPEKFKSFAKSAIL 67

Query: 104 VGSFIFM-GCFNVRYARALPAQTSSKNPTLAEKAQAPEEDSEEEMR--ERILEHDPTNID 163
           +G+ + M G F+      LP +  S   T+ +  +  +E+   E+     +L+  P  ++
Sbjct: 68  IGAAVSMTGKFS-----TLPVKAESPVTTIEKTYEEVKEEKLSEITPLSELLDSTPEAVE 127

Query: 164 TLKSVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLFMEIL 223
           TL+S+L  K+  G+ EEA+K ++RL+  +P+E EWK L+A     +G+ + A+++F EIL
Sbjct: 128 TLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPENARQMFEEIL 187

Query: 224 EKKPLLVRALHGLALVMHKNNEGQSVFEMLNKALDFACDEKKLTEMRSIGILIAQMHVVK 283
           ++ PL   AL   AL+M ++ EG +V + L  AL  A  E  + E R + ++IAQ+H ++
Sbjct: 188 QRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFLQ 247

Query: 284 GELEEGLKKFQDLVDENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEF 327
             ++E LK ++ L  E+P+DFRPY C+G+IYSL+DK  EA EQFA Y+ L P +F
Sbjct: 248 KNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKF 294

[Close]
BLAST of ClCG01G015960 vs. ExPASy Swiss-Prot
Match: O06917 (TPR repeat-containing protein MJ0263 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0263 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.7e-05
Identity = 28/102 (27.45%), Postives = 54/102 (52.94%), Query Frame = 0 

Query: 150 IDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLFME 209
           +   K + Y ++ +   EEA+ Y+ + ++  P++VE K  LAL YE L ++D A +++ +
Sbjct: 216 VHVYKDIAYLELANNNYEEALNYITKYLEKFPNDVEAKFYLALIYENLNKVDDALKIYDK 275

Query: 210 ILEKKP-----LLVRALHGLALVMHKNNEGQSVFEMLNKALD 247
           I+  K      L+  ++   A ++ K  + +   E  NKA D
Sbjct: 276 IISNKNVKDKLLIKSSILNKARILEKLGKIEEAVETYNKAFD 317

[Close]
BLAST of ClCG01G015960 vs. ExPASy Swiss-Prot
Match: Q58741 (TPR repeat-containing protein MJ1345 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1345 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 6.9e-04
Identity = 27/107 (25.23%), Postives = 54/107 (50.47%), Query Frame = 0 

Query: 140 ERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQ 199
           +++ E +  +I  L  ++   +  G+  +A++Y K+ + L PD+    L   +    LG+
Sbjct: 205 KKVFERNNKDIRALMYIIQILIYLGRLNQALEYTKKALKLNPDDPLLYLYKGIILNKLGK 264

Query: 200 LDTAKRLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEMLNKALD 247
            + A + F ++LE  P +  A +G A+ + K  +     E  N+ALD
Sbjct: 265 YNEAIKYFDKVLEINPNIPDAWNGKAIALEKLGKINEAIECYNRALD 311

[Close]
BLAST of ClCG01G015960 vs. ExPASy TrEMBL
Match: A0A0A0KHZ0 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486920 PE=4 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 8.6e-167
Identity = 310/362 (85.64%), Postives = 333/362 (91.99%), Query Frame = 0 

Query: 1   MGSTSA--FSVLSQLELP-GPKSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHS 60
           MGSTSA  FSV SQ+ELP  PK SSYNVRAL KC+ +IL+KNYK +SQSLF S AKIFHS
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  PIHNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTS 120
           PIHN PFSNL ESDI R  SPQIKIS YF+E+FVGFLVGSFIFMGCFNVRY RALPAQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 SKNPTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLI 180
           +KNP LAEKAQ PEEDSEE M ERILEHDP+N+DTLK+VLYGKMRSGKTE A+KYVKRLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNNEGQSV 240
           DLEPDEVEW++LLALCYE LG+L TAKRLFMEIL++KPLLVRALHGLALVMHKNNEG+SV
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDFACDEKKLTEMRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLC 300
           FEMLNKALD A DEKKLTE RSIGILIAQMHVVKGELEEGLKKFQ+LV+ENPRDFRP+LC
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTH 360
           QGIIYSL+DKKKEAAEQF TYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFT+
Sbjct: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360

[Close]
BLAST of ClCG01G015960 vs. ExPASy TrEMBL
Match: A0A5D3CPL4 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005710 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 4.7e-165
Identity = 311/358 (86.87%), Postives = 331/358 (92.46%), Query Frame = 0 

Query: 3   STSAFSVLSQLELPG-PKSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHSPIHN 62
           STSAFSV SQ+ELPG PK SSYNVRAL   R SIL+KNYK +SQSLFYS  KIFHSPIHN
Sbjct: 5   STSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYS-PKIFHSPIHN 64

Query: 63  PPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTSSKNP 122
             FSNL ESDI RSTSPQIK+S Y VE+FVGFLVGSFIFMGCFN+RYARALPAQTSSKNP
Sbjct: 65  TLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTSSKNP 124

Query: 123 TLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEP 182
           TLAEKAQ PE DS EEM ERILEHDP+N+DTLK+VLYGKMRSGKTEEAIKYVKRLIDLEP
Sbjct: 125 TLAEKAQIPEGDS-EEMWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLIDLEP 184

Query: 183 DEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEML 242
           DEVEW+LLLALCYETLG+L TAKRLFMEIL++KPLLVRALHGLALVMHKNNEG+SVFEML
Sbjct: 185 DEVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFEML 244

Query: 243 NKALDFACDEKKLTEMRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGII 302
           NKALD A DEKKL E RSIGILIAQMHVVKGELEEGLKKFQ+LV+ENPRDFRP+LCQGII
Sbjct: 245 NKALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGII 304

Query: 303 YSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTHKK 360
           YSL+DKKKEAAEQF  YQALVPDEFPQREFIDD+MLSATTASREQFQKEFDAEFT+KK
Sbjct: 305 YSLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTNKK 360

[Close]
BLAST of ClCG01G015960 vs. ExPASy TrEMBL
Match: A0A1S3B0E6 (LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484686 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 4.7e-165
Identity = 311/358 (86.87%), Postives = 331/358 (92.46%), Query Frame = 0 

Query: 3   STSAFSVLSQLELPG-PKSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHSPIHN 62
           STSAFSV SQ+ELPG PK SSYNVRAL   R SIL+KNYK +SQSLFYS  KIFHSPIHN
Sbjct: 5   STSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYS-PKIFHSPIHN 64

Query: 63  PPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTSSKNP 122
             FSNL ESDI RSTSPQIK+S Y VE+FVGFLVGSFIFMGCFN+RYARALPAQTSSKNP
Sbjct: 65  TLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTSSKNP 124

Query: 123 TLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEP 182
           TLAEKAQ PE DS EEM ERILEHDP+N+DTLK+VLYGKMRSGKTEEAIKYVKRLIDLEP
Sbjct: 125 TLAEKAQIPEGDS-EEMWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLIDLEP 184

Query: 183 DEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEML 242
           DEVEW+LLLALCYETLG+L TAKRLFMEIL++KPLLVRALHGLALVMHKNNEG+SVFEML
Sbjct: 185 DEVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFEML 244

Query: 243 NKALDFACDEKKLTEMRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGII 302
           NKALD A DEKKL E RSIGILIAQMHVVKGELEEGLKKFQ+LV+ENPRDFRP+LCQGII
Sbjct: 245 NKALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGII 304

Query: 303 YSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTHKK 360
           YSL+DKKKEAAEQF  YQALVPDEFPQREFIDD+MLSATTASREQFQKEFDAEFT+KK
Sbjct: 305 YSLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTNKK 360

[Close]
BLAST of ClCG01G015960 vs. ExPASy TrEMBL
Match: A0A6J1BU39 (protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005371 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 6.2e-149
Identity = 277/357 (77.59%), Postives = 305/357 (85.43%), Query Frame = 0 

Query: 3   STSAFSVLSQLELPGPKSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHSPIHNP 62
           STSAF V SQ+ LPGPK SSYNVR  P  R   LRKNY         + AK FH P  NP
Sbjct: 5   STSAFLVCSQIILPGPKVSSYNVRKSPNSRFIGLRKNYN--------AVAKFFHFPTLNP 64

Query: 63  PFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTSSKNPT 122
           P S L ESD CRS+  Q  +S YF+E+FV  L+GSFIFMGCFNVRYA ALPAQ SSK+PT
Sbjct: 65  PVSKLSESDSCRSSPSQRNLSKYFLEKFVALLIGSFIFMGCFNVRYAMALPAQRSSKSPT 124

Query: 123 LAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEPD 182
           L EK     EDSEEEMRERILEH+P NIDTLK+VLYGKMRSGKT+EAIKYV+RLIDLEP+
Sbjct: 125 LDEKTDTLSEDSEEEMRERILEHEPRNIDTLKAVLYGKMRSGKTKEAIKYVQRLIDLEPE 184

Query: 183 EVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEMLN 242
           EVEW+LL+ALCYET+GQLDTAKRLFMEILEKKPLLVRALHGLALVMHKN EGQSVF+MLN
Sbjct: 185 EVEWRLLMALCYETMGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNKEGQSVFDMLN 244

Query: 243 KALDFACDEKKLTEMRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGIIY 302
           KALD A DEKK+TE RSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGIIY
Sbjct: 245 KALDIARDEKKVTEQRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGIIY 304

Query: 303 SLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTHKK 360
           SL+DKK+EAAEQF  Y+A+VPDEFPQ+EFIDD++LSATTASREQF+KEF AEF++KK
Sbjct: 305 SLLDKKREAAEQFEMYRAVVPDEFPQKEFIDDIVLSATTASREQFEKEFAAEFSYKK 353

[Close]
BLAST of ClCG01G015960 vs. ExPASy TrEMBL
Match: A0A6J1HF02 (protein SLOW GREEN 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463369 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 2.2e-146
Identity = 275/359 (76.60%), Postives = 307/359 (85.52%), Query Frame = 0 

Query: 1   MGSTSAFSVLSQLELPGPKSSSYNVRALPKCRLSILRKNYKPTSQSLFYSAAKIFHSPIH 60
           MGS SAFSV S++ELPGPK S YNVR  PK R ++ RKNY PTS+SL +S +K F+S IH
Sbjct: 1   MGSISAFSVCSKIELPGPKFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNSHIH 60

Query: 61  NPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIFMGCFNVRYARALPAQTSSKN 120
           + PFSNL ESD     + Q   S YFVE+ VGFLV  FIFMGCFNVR+  ALPAQTS K+
Sbjct: 61  DAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTSGKS 120

Query: 121 PTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLE 180
           PT+       +EDSEEEMRERILEHD  NIDTLK+VLYGKM SGKTEEAIKYV RLIDLE
Sbjct: 121 PTM-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLE 180

Query: 181 PDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEM 240
           PDEVEW+LLLALCYE +G+L+ AK LF+EILEK PLLVRALHGLALVMHKNNEGQSVFEM
Sbjct: 181 PDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSVFEM 240

Query: 241 LNKALDFACDEKKLTEMRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGI 300
           LNKALD A D KK+TE RSIGILIAQMHVVKGELEEGLKKFQ+LV+ENPRDFRPYLCQGI
Sbjct: 241 LNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGI 300

Query: 301 IYSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTHKK 360
           IYSL+D+K+EAAEQF TY+ALVPDEFPQREF+DDVMLSATTA+REQFQKEFDAEF++KK
Sbjct: 301 IYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYKK 352

[Close]
BLAST of ClCG01G015960 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 286.2 bits (731), Expect = 3.7e-77
Identity = 148/263 (56.27%), Postives = 202/263 (76.81%), Query Frame = 0 

Query: 94  LVGSFIFMGCFNVRYARALPAQTSSKNPTLAEKAQAPEEDSEEEMRERILEHDPTNIDTL 153
           LVGSF+F+G  + + A AL        PT    +QA  ED  E+M E++LE++P N++ +
Sbjct: 87  LVGSFVFLGFCSSKPALAL--------PTATVVSQAELED--EKMFEKLLENEPENMEAM 146

Query: 154 KSVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEK 213
           K+V+Y KMR GK E+A+KYV++L+ LEP EVEWKLL ALCYET+G+L  AKRL+ +IL++
Sbjct: 147 KAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGELSKAKRLYKDILKE 206

Query: 214 KPLLVRALHGLALVMHKNNEGQSVFEMLNKALDFACDEKKLTEMRSIGILIAQMHVVKGE 273
           +PLL+RALHGLA+VMHK ++  SVF+ML +A++ A    ++TE R+I +LI QMH+V+G+
Sbjct: 207 QPLLIRALHGLAMVMHKTHD-TSVFDMLIEAMEVARQGNRVTEERNIQVLIGQMHIVEGQ 266

Query: 274 LEEGLKKFQDLVDENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEFPQREFID 333
            EEGLK FQ +V++NPRDFRPYLCQGI+YSLMDKK+EAA+QF  Y +LVP EFPQ+ F+D
Sbjct: 267 FEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYWSLVPGEFPQKGFLD 326

Query: 334 DVMLSATTASREQFQKEFDAEFT 357
           DV L+A   SRE+ Q  F A+FT
Sbjct: 327 DVALAAQAKSRERLQNTFKAKFT 338

[Close]
BLAST of ClCG01G015960 vs. TAIR 10
Match: AT3G18420.1 (Protein prenylyltransferase superfamily protein )

HSP 1 Score: 166.4 bits (420), Expect = 4.2e-41
Identity = 103/295 (34.92%), Postives = 168/295 (56.95%), Query Frame = 0 

Query: 44  SQSLFYSAAKIFHSPIHNPPFSNLPESDI----CRSTSPQIKISTYFVERFVGF-----L 103
           S SL  S   +  +P+  P    +P  D+     R++S Q      F E+F  F     L
Sbjct: 8   SSSLVSSFVAVKATPVTGP---LIPRRDLLSIRIRASSNQNSSGYCFPEKFKSFAKSAIL 67

Query: 104 VGSFIFM-GCFNVRYARALPAQTSSKNPTLAEKAQAPEEDSEEEMR--ERILEHDPTNID 163
           +G+ + M G F+      LP +  S   T+ +  +  +E+   E+     +L+  P  ++
Sbjct: 68  IGAAVSMTGKFS-----TLPVKAESPVTTIEKTYEEVKEEKLSEITPLSELLDSTPEAVE 127

Query: 164 TLKSVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLFMEIL 223
           TL+S+L  K+  G+ EEA+K ++RL+  +P+E EWK L+A     +G+ + A+++F EIL
Sbjct: 128 TLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPENARQMFEEIL 187

Query: 224 EKKPLLVRALHGLALVMHKNNEGQSVFEMLNKALDFACDEKKLTEMRSIGILIAQMHVVK 283
           ++ PL   AL   AL+M ++ EG +V + L  AL  A  E  + E R + ++IAQ+H ++
Sbjct: 188 QRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFLQ 247

Query: 284 GELEEGLKKFQDLVDENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEF 327
             ++E LK ++ L  E+P+DFRPY C+G+IYSL+DK  EA EQFA Y+ L P +F
Sbjct: 248 KNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKF 294

[Close]
BLAST of ClCG01G015960 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 2.3e-39
Identity = 96/237 (40.51%), Postives = 142/237 (59.92%), Query Frame = 0 

Query: 121 PTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLE 180
           P++  K     E+ E  + E ++ H P+++D L+S++  K++S K  EA++ + RLI LE
Sbjct: 102 PSVESKENVTLEEEERALDEHLITH-PSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLE 161

Query: 181 PDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEM 240
           P+E EW +L A  +   G LD AK  F EIL K PL V A HG  L+M  ++ G  + E+
Sbjct: 162 PEEKEWPVLKANIFTYSGDLDLAKTGFEEILAKDPLRVEAYHG--LLMAYSDAGLDLKEV 221

Query: 241 ---LNKALDFACDEKKLTEMRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLC 300
              + +A+     E    + R   +L+AQ+ V++G+  E LK +Q+LV E PRDFRPYLC
Sbjct: 222 ESRIEEAMLKCKKENNQNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLC 281

Query: 301 QGIIYSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAE 355
           QGIIY+L+ KK +A EQF  ++ LVP   P RE+  D M+ AT    E+ Q+E   E
Sbjct: 282 QGIIYTLLKKKDKAEEQFDNFRKLVPKNHPYREYFMDNMI-ATKLFSEKAQREMAEE 334

[Close]
BLAST of ClCG01G015960 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 4.4e-38
Identity = 95/302 (31.46%), Postives = 166/302 (54.97%), Query Frame = 0 

Query: 41  KPTSQSLFYSAAKIFHSPIHNPPFSNLPESDICRSTSPQIKISTYFVERFVGFLVGSFIF 100
           KP  + + Y   +I H P   PP   +  S    +  P    +T         L+ + + 
Sbjct: 23  KPQPKPVSY---RILHKP---PPSRVIRASSFSSNPKPSFLKTTCVTLTTAAALLSASLH 82

Query: 101 MGCFNVRYARAL---PAQTSSKNPTLAEKAQAPEEDSEEEMRERILEHDPTNIDTLKSVL 160
           +    V  A  +   P  +++ + T  + +  P+E+ EE   E+ L  +P +++ L+S++
Sbjct: 83  LSTKPVTAATLVSPPPPPSTAADLTSDQISSRPKEEEEEAALEKHLTKNPNDVEALQSLM 142

Query: 161 YGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLFMEILEKKPLL 220
             K ++   + A++ + RLI+++P+E EW++L A      G  D+A + F E+L K P  
Sbjct: 143 KIKFQTKNIDHALEILNRLIEIQPEEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFR 202

Query: 221 VRALHGLALVMHKNNEGQSVFE-MLNKALDFACDEKKLTEMRSIGILIAQMHVVKGELEE 280
           V A HGL +   ++    S  E  +N+A++  C ++   + R   +LIAQ+ V+KG   E
Sbjct: 203 VEAYHGLVMAYSESESKLSEIESRINEAIE-KCKKENKKDFRDFMLLIAQIRVIKGNPIE 262

Query: 281 GLKKFQDLVDENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEFPQREFIDDVM 339
            L+ +Q+LV + P+DFRPYLCQG+IY+LM KK EA +QFA ++ LVP+  P +E++D  +
Sbjct: 263 ALRVYQELVKDEPKDFRPYLCQGLIYTLMKKKDEAEKQFAEFRRLVPENHPYKEYLDANV 317

[Close]
BLAST of ClCG01G015960 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 3.7e-37
Identity = 93/264 (35.23%), Postives = 153/264 (57.95%), Query Frame = 0 

Query: 91  VGFLVGSFIFMGCFNVRYARALPAQTSSKNPTLAEKAQAPEE---DSEEEMRERILEHDP 150
           V F   + +F+    ++ + A+ A  ++  P +    Q+      + EE   E  L   P
Sbjct: 69  VSFTAAAALFLVNLQLKPSPAIAAPVAA-TPLMESLKQSNGNVSFEEEERSLEEYLASHP 128

Query: 151 TNIDTLKSVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWKLLLALCYETLGQLDTAKRLF 210
            +++ L+S++  +++S K  EAI+ + RLI+LEP+E EW +L A  +   G L++AK  F
Sbjct: 129 DDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANIFSYSGDLESAKTGF 188

Query: 211 MEILEKKPLLVRALHGLALVMHKNNEG-QSVFEMLNKALDFACDEKKLTEMRSIGILIAQ 270
            EIL K PL V A HGL +    + +   +V + + +A+     EK   ++R   +L+AQ
Sbjct: 189 EEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKEKNRKDLRDFKLLVAQ 248

Query: 271 MHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGIIYSLMDKKKEAAEQFATYQALVPDEF 330
           + V++G+  E LK +++LV E PRDFRPYLCQGIIY+++ K+ EA +QF  ++ LVP   
Sbjct: 249 IRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENEAEKQFEKFRRLVPKNH 308

Query: 331 PQREFIDDVMLSATTASREQFQKE 351
           P RE+  D M+ A+    E+ Q+E
Sbjct: 309 PYREYFMDNMV-ASKLFAEKVQRE 330

The following BLAST results are available for this feature:
BLAST of ClCG01G015960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038880966.11.8e-17188.83protein SLOW GREEN 1, chloroplastic [Benincasa hispida][more]
XP_004141968.11.8e-16685.64protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KGN48419.1 hypothetical p... [more]
XP_008440127.19.8e-16586.87PREDICTED: LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic [Cucumis mel... [more]
XP_022132537.11.3e-14877.59protein SLOW GREEN 1, chloroplastic [Momordica charantia][more]
XP_022963051.14.6e-14676.60protein SLOW GREEN 1, chloroplastic isoform X2 [Cucurbita moschata][more]
BLAST of ClCG01G015960 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LS486.0e-4034.92protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ... [more]
O069173.7e-0527.45TPR repeat-containing protein MJ0263 OS=Methanocaldococcus jannaschii (strain AT... [more]
Q587416.9e-0425.23TPR repeat-containing protein MJ1345 OS=Methanocaldococcus jannaschii (strain AT... [more]
BLAST of ClCG01G015960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHZ08.6e-16785.64TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486920 ... [more]
A0A5D3CPL44.7e-16586.87Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255... [more]
A0A1S3B0E64.7e-16586.87LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656... [more]
A0A6J1BU396.2e-14977.59protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110053... [more]
A0A6J1HF022.2e-14676.60protein SLOW GREEN 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=... [more]
BLAST of ClCG01G015960 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G39470.13.7e-7756.27Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G18420.14.2e-4134.92Protein prenylyltransferase superfamily protein [more]
AT3G53560.12.3e-3940.51Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G02590.14.4e-3831.46Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G37400.13.7e-3735.23Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14559TPR_19coord: 162..221
e-value: 6.8E-9
score: 36.1
NoneNo IPR availablePANTHERPTHR26312TETRATRICOPEPTIDE REPEAT PROTEIN 5coord: 25..351
NoneNo IPR availablePANTHERPTHR26312:SF137OS05G0182100 PROTEINcoord: 25..351
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 120..338
e-value: 2.7E-23
score: 84.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 144..331

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G015960.2ClCG01G015960.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding