ClCG01G014920 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G014920
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Transcription termination factor MTEF1
Location	CG_Chr01: 29250282 .. 29252609 (-)
RNA-Seq Expression	ClCG01G014920
Synteny	ClCG01G014920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCGAAGAGAGGCAGCTTCTTTCGCACTGAGGAATAAAGGGTCATCGTCTTCACAGAAATGTGCTCTGAGAACCCCAATTCGGATGTTGGTCTGTAGTGATGGCGAGCGAAGTACAGCAGTCCGTGGGGCAAGGACGTTGGCTCTGGAAAAGCTCCCCGTGAAAGCCATGGATGAGTATGAAGAGCGAATCAGTGAAGATAGACTATTATTTTCTCAAGTATGAAAACTCCAAAAAGCAACCCAAGTGGATTGGAGCGAAGGATGAAGGATGAAGGATGAAGAAATATAAAGTCGGGTAAGGCCAAAGCTATTTGAACCTCATCGAAACTGCTTCAGTAACTGCAAATTTCTTCGTTTGCCATCAGTTTTCAGTTCTGAAATTTCTCGGCCGAAAGAGGGGGAAATGTTTCTAAAGCTCGTTGGATTATTGAATAGATTGGCCTAAAAAATTTGGGCCATTGCCTTGTTTAGGTTTTATAACTTTTTTTTCAAATTTTATTTTATTATTTGTATTCTCTCTAAATATTCATCTCTTCTTCTTCTTCTCTAGATCTCTTCTCTATATTTCATCTCCGACAACGACGACAAAAAATGGGGTTGTTTGAACGGAAACAAACCAATGGTCTAAAAGGAAGGAGGACATTGAAAACCAAAGCAATAACTAGAATAAGGCAAAACCAAAGCTTAAAAGTGAGTTAGAACTAGACAAGAGTGAGAAGGTAAGCTAGAAATTGAAATAAAATTAAAACTAGAGCGAGAAAGTGAGCTAGAACTAGAATTAAGGTGAGAAAGTGAGCTAGAACTAAAACTAGATTGAGAAAGAATAATCGAAAAAAAAGGTTAATGAGGACAACAAAGGATTAGAAAACCTTATCTTAAAAAAGTAAAATCATTTTTCCAAAATGTTTAACGTGATTTGTACAAAACTTTCTACCTGACTACACTATTGTGTTGATTGACTAAATGAAAAGGGGTCTACTACAACCAGGAGAGGGAAATTTTACCTATTCTTTAAAATATTATGGCCTTCTTCAATTTTTTTTTTTAAATTATATTAACTAATTACATTAAACTTATAATTCTCATTTTTTTTCCTACCTAACTATTATTATTATTATTATTATTTTGAAATTATAACTATAGTTCTGCCCATCCAATTACCCTATAAATATGATTATTGGGCCTGGGCCATGTCCATTTGTGATTTGCGTCTCTTACATTATTTCGGATTTTTTGAAGATAGCACTTATCCTCTACGATTCCCTTCCTCACCACTTCCTGGATTCCCTCCGTAAAACCCCACAAGCTCCCCATTAACCATGCAATGGCGGATTCATCTCTTCACCTCCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTTTTCCCCTCTCTTCCTCGCTCCAGAACCCTCCAATTCCCTGTCCTCTCCAATTCCAGAATCTCTTTCGTCCTCCCCTCCAAACTCCCCCCTCGCAACCCCAGCATTCCTCCCCTCTCCCCCCCGCTCCCCCCTCCTCCGCCACACAACGACCACCACTCCGAATTTCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCCGCCTCCCTTCCCGACATCAGATCAGCCGTTGATTTCATGACCTCCATGAATTTCACCGCCCTCGAGTTCCGTCGAATCGTCGGTATGTGCCCCGAGATTCTCACCTCTCGCGCTTCCGACCTCATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGCGCCGATATCAAACGCGTTATCAATCGACGCCCTAGATTGCTCGCGTGCAGCGTAAAAGATCGACTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACTTCCTTACTCTCCTGTAGCGTGGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAAAACCTAGGGTTTTCTCGGCGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTCTGCTATAGCATAAAGGAGAATCTGGAGCCGAAACTGAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAGGAATTGAAGGAATTTCCTCATTACTTTTCGTTTAGCTTAGAGAACAGGATCAAGCCGAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAACCAGTGAGATGAAATTCCGGGAGAAATTAGAGGTATGTTGTGATTCTTCAATACCCTTTAGAACTTCTCCTTTGTGGTGTACAAAATTGTGA

mRNA sequence

ATGAACCGAAGAGAGGCAGCTTCTTTCGCACTGAGGAATAAAGGGTCATCGTCTTCACAGAAATGTGCTCTGAGAACCCCAATTCGGATGTTGGTCTGTAGTGATGGCGAGCGAAGTACAGCAGTCCGTGGGGCAAGGACGTTGGCTCTGGAAAAGCTCCCCGTGAAAGCCATGGATGAGTATGAAGAGCGAATCAGTGAAGATAGACTATTATTTTCTCAACACTTATCCTCTACGATTCCCTTCCTCACCACTTCCTGGATTCCCTCCGTAAAACCCCACAAGCTCCCCATTAACCATGCAATGGCGGATTCATCTCTTCACCTCCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTTTTCCCCTCTCTTCCTCGCTCCAGAACCCTCCAATTCCCTGTCCTCTCCAATTCCAGAATCTCTTTCGTCCTCCCCTCCAAACTCCCCCCTCGCAACCCCAGCATTCCTCCCCTCTCCCCCCCGCTCCCCCCTCCTCCGCCACACAACGACCACCACTCCGAATTTCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCCGCCTCCCTTCCCGACATCAGATCAGCCGTTGATTTCATGACCTCCATGAATTTCACCGCCCTCGAGTTCCGTCGAATCGTCGGTATGTGCCCCGAGATTCTCACCTCTCGCGCTTCCGACCTCATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGCGCCGATATCAAACGCGTTATCAATCGACGCCCTAGATTGCTCGCGTGCAGCGTAAAAGATCGACTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACTTCCTTACTCTCCTGTAGCGTGGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAAAACCTAGGGTTTTCTCGGCGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTCTGCTATAGCATAAAGGAGAATCTGGAGCCGAAACTGAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAGGAATTGAAGGAATTTCCTCATTACTTTTCGTTTAGCTTAGAGAACAGGATCAAGCCGAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAACCAGTGAGATGAAATTCCGGGAGAAATTAGAGGTATGTTGTGATTCTTCAATACCCTTTAGAACTTCTCCTTTGTGGTGTACAAAATTGTGA

Coding sequence (CDS)

ATGAACCGAAGAGAGGCAGCTTCTTTCGCACTGAGGAATAAAGGGTCATCGTCTTCACAGAAATGTGCTCTGAGAACCCCAATTCGGATGTTGGTCTGTAGTGATGGCGAGCGAAGTACAGCAGTCCGTGGGGCAAGGACGTTGGCTCTGGAAAAGCTCCCCGTGAAAGCCATGGATGAGTATGAAGAGCGAATCAGTGAAGATAGACTATTATTTTCTCAACACTTATCCTCTACGATTCCCTTCCTCACCACTTCCTGGATTCCCTCCGTAAAACCCCACAAGCTCCCCATTAACCATGCAATGGCGGATTCATCTCTTCACCTCCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTTTTCCCCTCTCTTCCTCGCTCCAGAACCCTCCAATTCCCTGTCCTCTCCAATTCCAGAATCTCTTTCGTCCTCCCCTCCAAACTCCCCCCTCGCAACCCCAGCATTCCTCCCCTCTCCCCCCCGCTCCCCCCTCCTCCGCCACACAACGACCACCACTCCGAATTTCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCCGCCTCCCTTCCCGACATCAGATCAGCCGTTGATTTCATGACCTCCATGAATTTCACCGCCCTCGAGTTCCGTCGAATCGTCGGTATGTGCCCCGAGATTCTCACCTCTCGCGCTTCCGACCTCATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGCGCCGATATCAAACGCGTTATCAATCGACGCCCTAGATTGCTCGCGTGCAGCGTAAAAGATCGACTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACTTCCTTACTCTCCTGTAGCGTGGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAAAACCTAGGGTTTTCTCGGCGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTCTGCTATAGCATAAAGGAGAATCTGGAGCCGAAACTGAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAGGAATTGAAGGAATTTCCTCATTACTTTTCGTTTAGCTTAGAGAACAGGATCAAGCCGAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAACCAGTGAGATGAAATTCCGGGAGAAATTAGAGGTATGTTGTGATTCTTCAATACCCTTTAGAACTTCTCCTTTGTGGTGTACAAAATTGTGA

Protein sequence

MNRREAASFALRNKGSSSSQKCALRTPIRMLVCSDGERSTAVRGARTLALEKLPVKAMDEYEERISEDRLLFSQHLSSTIPFLTTSWIPSVKPHKLPINHAMADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKLPPRNPSIPPLSPPLPPPPPHNDHHSEFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKLEVCCDSSIPFRTSPLWCTKL

Homology

[Close]

BLAST of ClCG01G014920 vs. NCBI nr
Match: KAA0025223.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK07443.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 661.8 bits (1706), Expect = 4.2e-186
Identity = 327/345 (94.78%), Postives = 334/345 (96.81%), Query Frame = 0


Query: 89  PSVKPHKLPINHAMADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVL 148
           PSVKPHKL INHAMADSSLHLLSNGGFI HSSPSPLFPSLPR RTL FPVLSNSR SF+ 
Sbjct: 32  PSVKPHKLSINHAMADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIF 91

Query: 149 PSKLPPRNPSIPPLSPPLPPPPPHNDHHSEFQEKMLFLDSIGIDFLSVIKDHPPVASASL 208
           PSKLPPR P+IPPLS PLPP PPH DHHS+FQEKMLFLDSIGIDFLSVIKDHPPVASASL
Sbjct: 92  PSKLPPRVPTIPPLSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASL 151

Query: 209 PDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVI 268
           PDIRSAVDFMTSMNFTALEFRRIVGMCPE+LTSRASDLIPIFTFLLREARVDG+DIKRVI
Sbjct: 152 PDIRSAVDFMTSMNFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVI 211

Query: 269 NRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRR 328
           NRRPRLLACSVKD+LRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGF RR
Sbjct: 212 NRRPRLLACSVKDQLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRR 271

Query: 329 DALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQS 388
           DALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQS
Sbjct: 272 DALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQS 331

Query: 389 CVEKGVCFPLPELLKTSEMKFREKLEVCCDSSIPFRTSPLWCTKL 434
           CVEKGVCFPLPELLK+SEMKFREKLEVCCDSSIPFRTSPLWCTKL
Sbjct: 332 CVEKGVCFPLPELLKSSEMKFREKLEVCCDSSIPFRTSPLWCTKL 376

[Close]

BLAST of ClCG01G014920 vs. NCBI nr
Match: XP_016902903.1 (PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo])

HSP 1 Score: 617.8 bits (1592), Expect = 6.9e-173
Identity = 308/326 (94.48%), Postives = 315/326 (96.63%), Query Frame = 0


Query: 89  PSVKPHKLPINHAMADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVL 148
           PSVKPHKL INHAMADSSLHLLSNGGFI HSSPSPLFPSLPR RTL FPVLSNSR SF+ 
Sbjct: 44  PSVKPHKLSINHAMADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIF 103

Query: 149 PSKLPPRNPSIPPLSPPLPPPPPHNDHHSEFQEKMLFLDSIGIDFLSVIKDHPPVASASL 208
           PSKLPPR P+IPPLS PLPP PPH DHHS+FQEKMLFLDSIGIDFLSVIKDHPPVASASL
Sbjct: 104 PSKLPPRVPTIPPLSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASL 163

Query: 209 PDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVI 268
           PDIRSAVDFMTSMNFTALEFRRIVGMCPE+LTSRASDLIPIFTFLLREARVDG+DIKRVI
Sbjct: 164 PDIRSAVDFMTSMNFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVI 223

Query: 269 NRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRR 328
           NRRPRLLACSVKD+LRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGF RR
Sbjct: 224 NRRPRLLACSVKDQLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRR 283

Query: 329 DALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQS 388
           DALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQS
Sbjct: 284 DALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQS 343

Query: 389 CVEKGVCFPLPELLKTSEMKFREKLE 415
           CVEKGVCFPLPELLK+SEMKFREKLE
Sbjct: 344 CVEKGVCFPLPELLKSSEMKFREKLE 369

[Close]

BLAST of ClCG01G014920 vs. NCBI nr
Match: XP_038883666.1 (transcription termination factor MTEF1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 605.9 bits (1561), Expect = 2.7e-169
Identity = 306/323 (94.74%), Postives = 312/323 (96.59%), Query Frame = 0


Query: 102 MAD-SSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKLPPRNPSIP 161
           MAD SSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSNSRI+FV PSKLPPRNP+I 
Sbjct: 1   MADSSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRIAFVFPSKLPPRNPTIL 60

Query: 162 PLSPPLPPPPPHNDHHSEFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS 221
           PLSPPLPPPPPHNDHHS+FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS
Sbjct: 61  PLSPPLPPPPPHNDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS 120

Query: 222 MNFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVK 281
           MNFTALEFRRIVGMCPEILTS ASDL+PIFTFLLREARVDG+DIKRVINRRPRLLACSVK
Sbjct: 121 MNFTALEFRRIVGMCPEILTSPASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVK 180

Query: 282 DRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQL 341
           DRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQL
Sbjct: 181 DRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQL 240

Query: 342 FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE 401
           FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE
Sbjct: 241 FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE 300

Query: 402 LLKTSEMKFREKLEV------CC 418
           LLKTSEMKFR+KLEV      CC
Sbjct: 301 LLKTSEMKFRQKLEVILEVVSCC 323

[Close]

BLAST of ClCG01G014920 vs. NCBI nr
Match: XP_038883667.1 (transcription termination factor MTEF1, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 604.0 bits (1556), Expect = 1.0e-168
Identity = 303/314 (96.50%), Postives = 309/314 (98.41%), Query Frame = 0


Query: 102 MAD-SSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKLPPRNPSIP 161
           MAD SSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSNSRI+FV PSKLPPRNP+I 
Sbjct: 1   MADSSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRIAFVFPSKLPPRNPTIL 60

Query: 162 PLSPPLPPPPPHNDHHSEFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS 221
           PLSPPLPPPPPHNDHHS+FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS
Sbjct: 61  PLSPPLPPPPPHNDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS 120

Query: 222 MNFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVK 281
           MNFTALEFRRIVGMCPEILTS ASDL+PIFTFLLREARVDG+DIKRVINRRPRLLACSVK
Sbjct: 121 MNFTALEFRRIVGMCPEILTSPASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVK 180

Query: 282 DRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQL 341
           DRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQL
Sbjct: 181 DRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQL 240

Query: 342 FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE 401
           FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE
Sbjct: 241 FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE 300

Query: 402 LLKTSEMKFREKLE 415
           LLKTSEMKFR+KLE
Sbjct: 301 LLKTSEMKFRQKLE 314

[Close]

BLAST of ClCG01G014920 vs. NCBI nr
Match: KAE8647430.1 (hypothetical protein Csa_003511 [Cucumis sativus])

HSP 1 Score: 599.7 bits (1545), Expect = 1.9e-167
Identity = 299/313 (95.53%), Postives = 305/313 (97.44%), Query Frame = 0


Query: 102 MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKLPPRNPSIPP 161
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSNSR SF+ PSKLPPRNP+IPP
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60

Query: 162 LSPPLPPPPPHNDHHSEFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 221
           LSPPLPP PPH DHHS+FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 222 NFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKD 281
           NFT LE RRIVGMCPEILTSRAS LIPIFTFLLREARVDG+DIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 282 RLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 341
           +LRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF
Sbjct: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240

Query: 342 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 401
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300

Query: 402 LKTSEMKFREKLE 415
           LK+SEMKFREKLE
Sbjct: 301 LKSSEMKFREKLE 313

[Close]

BLAST of ClCG01G014920 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 1.3e-41
Identity = 95/241 (39.42%), Postives = 144/241 (59.75%), Query Frame = 0


Query: 179 FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEI 238
           F+EK+++L  + +D    ++ +P + SA +  + S    ++S   +     RI+ M P++
Sbjct: 33  FREKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDL 92

Query: 239 LTS-RASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGI-- 298
           LTS   S+++P+  FL  E  +   DI + I+R PRLL  SV  +LRP L FL+++G   
Sbjct: 93  LTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVG 152

Query: 299 --SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDALIMFRRFPQLFCYSIKENLEPK 358
             +   ++T LL  +VE  LIP+IE+  E LGF+R +   M  R P L  YS+  NL PK
Sbjct: 153 RDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 212

Query: 359 LNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREK 414
           + +F+ EM  ++KELK FP YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   
Sbjct: 213 VEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHW 272

[Close]

BLAST of ClCG01G014920 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 4.2e-24
Identity = 71/234 (30.34%), Postives = 121/234 (51.71%), Query Frame = 0


Query: 185 FLDSIGI---DFLSVIKDHPPVASASLPD-IRSAVDFMTSMNFTALEFRRIVGMCPEILT 244
           FL  +GI   D  +++   P +   SL D ++  + F+ ++     ++ +I+   P ILT
Sbjct: 238 FLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILT 297

Query: 245 SRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISE--- 304
                L     FL +    +   I R++ R P +++ SV+D+LRPT+ + +S+ +     
Sbjct: 298 YSRQKLTSTVEFLSQTGLTE-EQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVL 357

Query: 305 VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFV 364
           +H+       S+E  L P  EFF   GF   +  IM  R+  L+ +S+KEN+ PK +YF 
Sbjct: 358 LHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQ 417

Query: 365 VEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFRE 412
             M     EL +FP +F +SL+ RIKPR++     GV   L ++L  S ++F +
Sbjct: 418 T-MDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEK 469

[Close]

BLAST of ClCG01G014920 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.7e-20
Identity = 69/262 (26.34%), Postives = 127/262 (48.47%), Query Frame = 0


Query: 180 QEKMLFLDSIGI---DFLSVIKDHPPVASASLP-DIRSAVDFMTSMNFTALEFRRIVGMC 239
           QE++ +L S+G+   D   ++   P +   ++  ++++ + F+  +     +  +IV   
Sbjct: 220 QERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAAT 279

Query: 240 PEILT-SRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFL-QSI 299
           P + + S  + L P   +L+ E  +   D+ +V+   P++L   +         FL + +
Sbjct: 280 PSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKEL 339

Query: 300 G------ISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKE 359
           G      +  V KH  LL  S+++  +PRI F  ++G    D L +     Q+   S+++
Sbjct: 340 GAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLED 399

Query: 360 NLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVE-----KGVCFPLPELL 419
           NL+PK  Y V E+  E+  L ++P Y S SL+ RI+PRH+  VE     KG  FPL  L+
Sbjct: 400 NLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVRKGP-FPLSSLV 459

Query: 420 KTSEMKFREKLEVCCDSSIPFR 425
              E   ++      D+ + FR
Sbjct: 460 PNDESFCQQWAGTSVDTYLAFR 480

[Close]

BLAST of ClCG01G014920 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.5e-16
Identity = 61/227 (26.87%), Postives = 109/227 (48.02%), Query Frame = 0


Query: 195 SVIKDHPPVASASLPD-IRSAVDFMTSMNFTALEFRRIVGMCPEILT-SRASDLIPIFTF 254
           S I   PP+ S S+ + +   + F  ++     +  +++   P +++ S  + L  I +F
Sbjct: 97  SAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSF 156

Query: 255 LLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQ-SIGISE------VHKHTSLL 314
           L          I +V+ + P L+  SV  RLRPT  FL+ S+G+SE      V     LL
Sbjct: 157 LASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLL 216

Query: 315 SCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELK 374
              V + L P  ++ +  GF       M   +PQ+   S+K +L+P++ + V  MGR + 
Sbjct: 217 CRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMD 276

Query: 375 ELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREK 413
           E+  +P +F   L+ +++ R +   +  +   L E+L  +  KF EK
Sbjct: 277 EVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEK 323

[Close]

BLAST of ClCG01G014920 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.9e-16
Identity = 78/321 (24.30%), Postives = 132/321 (41.12%), Query Frame = 0


Query: 175 HHSEFQEKMLFLDSIGI--DFLS-VIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRI 234
           +  E  E + +L+S G+  D++  V+   P + S S+ +++S VDF   M     +F  +
Sbjct: 277 NREELNEIVEYLESNGVRRDWMGYVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTM 336

Query: 235 VGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDR--------- 294
           V   P+I+   +  ++      L+E  +   ++ R++  +P L+ CS+++R         
Sbjct: 337 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFY 396

Query: 295 --------------LRPTLY-------------FLQSIGISE------------------ 354
                         ++P LY             FLQ +GI                    
Sbjct: 397 YLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSL 456

Query: 355 -------------------------VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALI 414
                                    +    +LL CS+  KL P + ++ +LG        
Sbjct: 457 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 516

[Close]

BLAST of ClCG01G014920 vs. ExPASy TrEMBL
Match: A0A5A7SKM3 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001730 PE=3 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 2.0e-186
Identity = 327/345 (94.78%), Postives = 334/345 (96.81%), Query Frame = 0


Query: 89  PSVKPHKLPINHAMADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVL 148
           PSVKPHKL INHAMADSSLHLLSNGGFI HSSPSPLFPSLPR RTL FPVLSNSR SF+ 
Sbjct: 32  PSVKPHKLSINHAMADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIF 91

Query: 149 PSKLPPRNPSIPPLSPPLPPPPPHNDHHSEFQEKMLFLDSIGIDFLSVIKDHPPVASASL 208
           PSKLPPR P+IPPLS PLPP PPH DHHS+FQEKMLFLDSIGIDFLSVIKDHPPVASASL
Sbjct: 92  PSKLPPRVPTIPPLSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASL 151

Query: 209 PDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVI 268
           PDIRSAVDFMTSMNFTALEFRRIVGMCPE+LTSRASDLIPIFTFLLREARVDG+DIKRVI
Sbjct: 152 PDIRSAVDFMTSMNFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVI 211

Query: 269 NRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRR 328
           NRRPRLLACSVKD+LRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGF RR
Sbjct: 212 NRRPRLLACSVKDQLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRR 271

Query: 329 DALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQS 388
           DALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQS
Sbjct: 272 DALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQS 331

Query: 389 CVEKGVCFPLPELLKTSEMKFREKLEVCCDSSIPFRTSPLWCTKL 434
           CVEKGVCFPLPELLK+SEMKFREKLEVCCDSSIPFRTSPLWCTKL
Sbjct: 332 CVEKGVCFPLPELLKSSEMKFREKLEVCCDSSIPFRTSPLWCTKL 376

[Close]

BLAST of ClCG01G014920 vs. ExPASy TrEMBL
Match: A0A1S4E3U8 (transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107991918 PE=3 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 3.3e-173
Identity = 308/326 (94.48%), Postives = 315/326 (96.63%), Query Frame = 0


Query: 89  PSVKPHKLPINHAMADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVL 148
           PSVKPHKL INHAMADSSLHLLSNGGFI HSSPSPLFPSLPR RTL FPVLSNSR SF+ 
Sbjct: 44  PSVKPHKLSINHAMADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIF 103

Query: 149 PSKLPPRNPSIPPLSPPLPPPPPHNDHHSEFQEKMLFLDSIGIDFLSVIKDHPPVASASL 208
           PSKLPPR P+IPPLS PLPP PPH DHHS+FQEKMLFLDSIGIDFLSVIKDHPPVASASL
Sbjct: 104 PSKLPPRVPTIPPLSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASL 163

Query: 209 PDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVI 268
           PDIRSAVDFMTSMNFTALEFRRIVGMCPE+LTSRASDLIPIFTFLLREARVDG+DIKRVI
Sbjct: 164 PDIRSAVDFMTSMNFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVI 223

Query: 269 NRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRR 328
           NRRPRLLACSVKD+LRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGF RR
Sbjct: 224 NRRPRLLACSVKDQLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRR 283

Query: 329 DALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQS 388
           DALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQS
Sbjct: 284 DALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQS 343

Query: 389 CVEKGVCFPLPELLKTSEMKFREKLE 415
           CVEKGVCFPLPELLK+SEMKFREKLE
Sbjct: 344 CVEKGVCFPLPELLKSSEMKFREKLE 369

[Close]

BLAST of ClCG01G014920 vs. ExPASy TrEMBL
Match: A0A6J1IAF5 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471129 PE=3 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 9.7e-157
Identity = 278/315 (88.25%), Postives = 298/315 (94.60%), Query Frame = 0


Query: 100 HAMADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKLPPRNPSI 159
           + M D++LHLLSNGGF+HHSSPS LFPSL RSRTLQFP++SN++ +F+LPSKLP R P I
Sbjct: 2   NTMQDTALHLLSNGGFLHHSSPSSLFPSLSRSRTLQFPIISNAKTAFILPSKLPSRAPDI 61

Query: 160 PPLSPPLPPPPPHNDHHSEFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMT 219
           PPLSPPLPPPP H+   SEFQEKMLFLDSIGIDFLSVIKDHPPVA+ASL DIRSAVDFMT
Sbjct: 62  PPLSPPLPPPPSHSGSRSEFQEKMLFLDSIGIDFLSVIKDHPPVATASLADIRSAVDFMT 121

Query: 220 SMNFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSV 279
           SMNFTA+EFRRIVGMCPEILTSR SD++P+FTFLLREARVDG+DIKRVINRRPRLLACSV
Sbjct: 122 SMNFTAVEFRRIVGMCPEILTSRVSDIVPVFTFLLREARVDGSDIKRVINRRPRLLACSV 181

Query: 280 KDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQ 339
           K+RLRPT+YFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDA+IMFRRFPQ
Sbjct: 182 KNRLRPTMYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQ 241

Query: 340 LFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLP 399
           LFC SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQ CVEKGVCFPLP
Sbjct: 242 LFCCSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQICVEKGVCFPLP 301

Query: 400 ELLKTSEMKFREKLE 415
            LLKTSEMKFREKLE
Sbjct: 302 VLLKTSEMKFREKLE 316

[Close]

BLAST of ClCG01G014920 vs. ExPASy TrEMBL
Match: A0A6J1HHJ6 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463541 PE=3 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 1.4e-155
Identity = 279/315 (88.57%), Postives = 298/315 (94.60%), Query Frame = 0


Query: 100 HAMADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKLPPRNPSI 159
           +AM D++LHLLSNGGF+HHSSPS LFPSL RSRTLQFP + N++I+F+LPSKLP R P I
Sbjct: 2   NAMQDTALHLLSNGGFLHHSSPSSLFPSLSRSRTLQFPTI-NAKIAFILPSKLPSRAPDI 61

Query: 160 PPLSPPLPPPPPHNDHHSEFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMT 219
           PPLSPPLPPPP H+   SEFQEKMLFLDSIGIDFLSVIKDHPPVA+ASL DIRSAVDFMT
Sbjct: 62  PPLSPPLPPPPSHSGSRSEFQEKMLFLDSIGIDFLSVIKDHPPVATASLADIRSAVDFMT 121

Query: 220 SMNFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSV 279
           SMNFTA+EFRRIVGMCPEILTSR SD++P+FTFLLREARVDG+DIKRVINRRPRLLACSV
Sbjct: 122 SMNFTAVEFRRIVGMCPEILTSRVSDIVPVFTFLLREARVDGSDIKRVINRRPRLLACSV 181

Query: 280 KDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQ 339
           K+RLRPT+YFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDA+IMFRRFPQ
Sbjct: 182 KNRLRPTMYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQ 241

Query: 340 LFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLP 399
           LFC SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQ CVEKGVCFPLP
Sbjct: 242 LFCCSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQICVEKGVCFPLP 301

Query: 400 ELLKTSEMKFREKLE 415
            LLKTSEMKFREKLE
Sbjct: 302 VLLKTSEMKFREKLE 315

[Close]

BLAST of ClCG01G014920 vs. ExPASy TrEMBL
Match: A0A0A0KKL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454440 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 1.5e-136
Identity = 257/314 (81.85%), Postives = 264/314 (84.08%), Query Frame = 0


Query: 102 MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKLPPRNPSIPP 161
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSNSR SF+ PSKLPPRNP+IPP
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60

Query: 162 LSPPLPPPPPHNDHHSEFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 221
           LSPPLPP PPH DHHS+FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 222 NFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKD 281
           NFT LE RRIVGMCPEILTSRAS LIPIFTFLLREARVDG+DIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 282 RLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 341
           +LRPTLYFLQSIGISE                                          LF
Sbjct: 181 QLRPTLYFLQSIGISE------------------------------------------LF 240

Query: 342 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 401
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 272

Query: 402 LKTSEMKFREKLEV 416
           LK+SEMKFREKLE+
Sbjct: 301 LKSSEMKFREKLEL 272

[Close]

BLAST of ClCG01G014920 vs. TAIR 10
Match: AT2G36000.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 336.3 bits (861), Expect = 3.7e-92
Identity = 185/338 (54.73%), Postives = 230/338 (68.05%), Query Frame = 0


Query: 102 MADSSLHLLSNG-GFIHHSSPSPLFPSLPRSRTLQFPVL------SNSRISFVLPSKLPP 161
           M   +L  LS+    +HH+     FPSL R R   FP L      S+S  SF        
Sbjct: 1   MQQEALSFLSSSLPSLHHN-----FPSLSRLRFNNFPALSFKPNTSSSSSSFF------- 60

Query: 162 RNPSIPPLSPPLPPPPPHNDHHSEFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSA 221
           ++P IP LS             S   EK+++LDS+GIDFL++I  HPP+ S +L  + S 
Sbjct: 61  KSPDIPSLSSTTTTTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESV 120

Query: 222 VDFMTS--MNFTALEFRRIVGMCPEILTS-RASDLIPIFTFLLREARVDGA-DIKRVINR 281
           VD+MT+  +NFT  +FRR+V MCPE+LTS   S  IP+ TFLLRE  VD   D+++ + R
Sbjct: 121 VDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRR 180

Query: 282 RPRLLACSVKDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDA 341
           RPRLLACSV  +LRPTLYFLQ IGI + HKHT LLSCSV+ KL+PRI++FE LGFSRR A
Sbjct: 181 RPRLLACSVDHQLRPTLYFLQRIGILDPHKHTYLLSCSVDNKLVPRIDYFEKLGFSRRSA 240

Query: 342 LIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCV 401
             MF+RFPQLF YSI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C 
Sbjct: 241 TAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACA 300

Query: 402 EKGVCFPLPELLKTSEMKFREKLEVCCDSSIPFRTSPL 429
            KGV FPLP +LKT+E  FR+ LEVCCDSS P +TS L
Sbjct: 301 AKGVRFPLPVMLKTNEAGFRDTLEVCCDSSPPLKTSRL 326

[Close]

BLAST of ClCG01G014920 vs. TAIR 10
Match: AT2G36000.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 316.6 bits (810), Expect = 3.1e-86
Identity = 176/325 (54.15%), Postives = 220/325 (67.69%), Query Frame = 0


Query: 102 MADSSLHLLSNG-GFIHHSSPSPLFPSLPRSRTLQFPVL------SNSRISFVLPSKLPP 161
           M   +L  LS+    +HH+     FPSL R R   FP L      S+S  SF        
Sbjct: 1   MQQEALSFLSSSLPSLHHN-----FPSLSRLRFNNFPALSFKPNTSSSSSSFF------- 60

Query: 162 RNPSIPPLSPPLPPPPPHNDHHSEFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSA 221
           ++P IP LS             S   EK+++LDS+GIDFL++I  HPP+ S +L  + S 
Sbjct: 61  KSPDIPSLSSTTTTTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESV 120

Query: 222 VDFMTS--MNFTALEFRRIVGMCPEILTS-RASDLIPIFTFLLREARVDGA-DIKRVINR 281
           VD+MT+  +NFT  +FRR+V MCPE+LTS   S  IP+ TFLLRE  VD   D+++ + R
Sbjct: 121 VDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRR 180

Query: 282 RPRLLACSVKDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDA 341
           RPRLLACSV  +LRPTLYFLQ IGI + HKHT LLSCSV+ KL+PRI++FE LGFSRR A
Sbjct: 181 RPRLLACSVDHQLRPTLYFLQRIGILDPHKHTYLLSCSVDNKLVPRIDYFEKLGFSRRSA 240

Query: 342 LIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCV 401
             MF+RFPQLF YSI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C 
Sbjct: 241 TAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACA 300

Query: 402 EKGVCFPLPELLKTSEMKFREKLEV 416
            KGV FPLP +LKT+E  FR+ LEV
Sbjct: 301 AKGVRFPLPVMLKTNEAGFRDTLEV 313

[Close]

BLAST of ClCG01G014920 vs. TAIR 10
Match: AT2G34620.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 193.4 bits (490), Expect = 3.9e-49
Identity = 102/241 (42.32%), Postives = 157/241 (65.15%), Query Frame = 0


Query: 178 EFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPE 237
           + +EK+L L+ +GID    +  +P + SA L  I+S + F+ S      +  RI+GMCP+
Sbjct: 54  QMKEKILCLELMGIDSGKALSLNPCLCSAPLDSIQSVLHFLQSKGIYPNDLPRILGMCPK 113

Query: 238 ILTSRA-SDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGIS 297
           ILTS   ++L P+F FL  +  V     +RVI + PRLL  SV+D+L+P L++LQ +G+ 
Sbjct: 114 ILTSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKPALFYLQRLGLK 173

Query: 298 EV----HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPK 357
           ++    ++   LL  SVE  LIP++ F E++GFSR +A+ M  R P LF +SI+ N +PK
Sbjct: 174 DLEALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPEAIGMILRCPALFTFSIENNFKPK 233

Query: 358 LNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREK 414
           L+YF+ E+  +L+ LKEFP YF+FSLE RIKPRH   +E+G+  PL  +LK+++ +F + 
Sbjct: 234 LDYFMSEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMERGLELPLSLMLKSTDEEFEQL 293

[Close]

BLAST of ClCG01G014920 vs. TAIR 10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 172.2 bits (435), Expect = 9.3e-43
Identity = 95/241 (39.42%), Postives = 144/241 (59.75%), Query Frame = 0


Query: 179 FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEI 238
           F+EK+++L  + +D    ++ +P + SA +  + S    ++S   +     RI+ M P++
Sbjct: 32  FREKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDL 91

Query: 239 LTS-RASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGI-- 298
           LTS   S+++P+  FL  E  +   DI + I+R PRLL  SV  +LRP L FL+++G   
Sbjct: 92  LTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVG 151

Query: 299 --SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDALIMFRRFPQLFCYSIKENLEPK 358
             +   ++T LL  +VE  LIP+IE+  E LGF+R +   M  R P L  YS+  NL PK
Sbjct: 152 RDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 211

Query: 359 LNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREK 414
           + +F+ EM  ++KELK FP YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   
Sbjct: 212 VEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHW 271

[Close]

BLAST of ClCG01G014920 vs. TAIR 10
Match: AT3G18870.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-30
Identity = 88/268 (32.84%), Postives = 142/268 (52.99%), Query Frame = 0


Query: 159 IPPLSPPLPPPPPHND------HHSEFQEKMLFLDSIGIDFLSVIKDHPPVA--SASLPD 218
           + PLS    PP P +         +  +E +  L S+GI     +  +P +A  +  L  
Sbjct: 10  LQPLSSFSSPPSPSSSKPLYLKFQTSHRENLRHLSSLGI-----VPQNPRLAPPANDLSV 69

Query: 219 IRSAVDFMTSMNFTALEFRRIVGMCPEIL--TSRASDLIPIFTFLLREARVDGADIKRVI 278
           I SAV+ + S   +  +F R+V +CP++   T   S L P+F FL  E      + + +I
Sbjct: 70  ILSAVNLLKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLI 129

Query: 279 NRRPRLLACSVKDRLRPTLYFLQSIGISEVHK----HTSLLSCSVEEKLIPRIEFFENLG 338
              P +L   V+  LRPTL +L+ +G+  +++    +  +L+  V EKL  ++ F +++G
Sbjct: 130 VNCPNILFSDVEYCLRPTLVYLKELGVRNLNRASKTNAHVLNTRV-EKLRAKMRFLKSIG 189

Query: 339 FSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKP 398
           F   +A  +  R P +F YS+++NL PK  + V +M REL+ELK+FP YF+FSL  RI+P
Sbjct: 190 FEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLGKRIRP 249

Query: 399 RHQSCVEKGVCFPLPELLKTSEMKFREK 413
           RH    +K V   L  +L   + KF  K
Sbjct: 250 RHWHLKKKNVRVSLSRMLMWGDQKFYSK 271

The following BLAST results are available for this feature:

BLAST of ClCG01G014920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025223.1	4.2e-186	94.78	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK07443.1 tr...	[more]
XP_016902903.1	6.9e-173	94.48	PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo]	[more]
XP_038883666.1	2.7e-169	94.74	transcription termination factor MTEF1, chloroplastic isoform X1 [Benincasa hisp...	[more]
XP_038883667.1	1.0e-168	96.50	transcription termination factor MTEF1, chloroplastic isoform X2 [Benincasa hisp...	[more]
KAE8647430.1	1.9e-167	95.53	hypothetical protein Csa_003511 [Cucumis sativus]	[more]

BLAST of ClCG01G014920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84X53	1.3e-41	39.42	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
F4JVI3	4.2e-24	30.34	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FM80	1.7e-20	26.34	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	1.5e-16	26.87	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
F4IHL3	1.9e-16	24.30	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of ClCG01G014920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SKM3	2.0e-186	94.78	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4E3U8	3.3e-173	94.48	transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1IAF5	9.7e-157	88.25	transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=366...	[more]
A0A6J1HHJ6	1.4e-155	88.57	transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3...	[more]
A0A0A0KKL6	1.5e-136	81.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454440 PE=3 SV=1	[more]

BLAST of ClCG01G014920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36000.1	3.7e-92	54.73	Mitochondrial transcription termination factor family protein	[more]
AT2G36000.2	3.1e-86	54.15	Mitochondrial transcription termination factor family protein	[more]
AT2G34620.1	3.9e-49	42.32	Mitochondrial transcription termination factor family protein	[more]
AT2G03050.1	9.3e-43	39.42	Mitochondrial transcription termination factor family protein	[more]
AT3G18870.1	1.8e-30	32.84	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 229..260 e-value: 7.3 score: 15.5 coord: 331..363 e-value: 2.0E-5 score: 34.0 coord: 364..395 e-value: 0.0022 score: 27.2 coord: 265..296 e-value: 1.3E-5 score: 34.7 coord: 194..224 e-value: 240.0 score: 8.7 coord: 297..326 e-value: 0.011 score: 24.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 254..409 e-value: 1.4E-34 score: 119.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 165..422
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 245..416 e-value: 3.2E-38 score: 133.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..173
None	No IPR available	PANTHER	PTHR13068:SF46	OS03G0360600 PROTEIN	coord: 165..422

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G014920.2	ClCG01G014920.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003690	double-stranded DNA binding