ClCG01G014080 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G014080
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Gibberellin-regulated protein 2
Location	CG_Chr01: 28324224 .. 28326215 (-)
RNA-Seq Expression	ClCG01G014080
Synteny	ClCG01G014080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGGCATGGCGGTTCGTAATTTCCTCCTCCTCCTTCTTCTTGGGGTTTTCGTCTTCCTCTGCCTTTCACAGGTAAAGCCTCTATTCTTACTCTCACTCCACCCCTACCTTTTGCTTAATCGAGTTTTTAGGCCCATTTTGATAATTATTTAGATCTTGCTTGGTAGCTATTTTTTTCTTTTTTAAAATTAAGTTTGTTTTCTTTCCATTTTTAACAATAATTTGCATCTTTCTTAAATGTTAGAGTTGAATTCTTAATCAAAATTCAAAAACAAAAACAAGTTTTTATCAACTACATTTTTAAATTTTTAAACTTTGAGTTAGCTTTTGAAAATATTGATAAATAGATAACATTTAGAAGTGGAAGGAATGTTTATAGGTTTAATTTTTTAAAAATTAAAATAAAAGACTAAATATTTACTAAATAGGCCTTAATTTTTAAAATTAAACTAACTTCTGACCATTGTTTTTTTTTTCTTTCCAAAATCCAAGAAATAAGTTTGAAAACTAAATTAAATTTTTTTTTTTTTTTGTTTGGTGTTTGGTTAAGATTAATATATTTACTTAAAAAATAAATCTATGTGCAGAAAATTATGAGAAAAAAAAGCTAGAATTTTAAAAATAAAAAGTCAAAAACCTCACGTTGAGGTCACATTTGATAATTATCTGATTTTTAGTTTTTAACTTTTAAAAATTATGTTTTTTTTAATTTTTTTTAATTTTTTTTACCATAGTTTTGATCCTTTCTAACTAAATACTTGAATTTCTAAAAATAAATTCAAAATTTTTAAAATAATTTTTTTAATTTCATTTTCAAAACTTGTCTTATCTTTTAAAAGATGCTGATACAAAGTAAATAATTAATACATAGAAATAGTGTTTATAATTTTGAAAAAAATATATCAAACAAGTAATATTTTTCCCATCTAGGTTTCCTTTTTTATAGTTCAACTAATCTCAAAATGGGAGTTCGAATCTTAAAACAAGATAACAACTTAAATTAGAAGTAGGTTTGTGCCTTTTTAAACATATCTCAATATTGAATTTAAAATGAAAAACATTTCTCAATTTTTAAATTTGTGTCATATAAGTGTTGAATTTTAAAAACGTTTACTAGATACATAAACTTTTAATTTTGTGTCTAATAGGTTGTTGACCCATTCTAACATTTTTTAAAGAAATTAAAAGACCTACTCGACACAAAAATAGAAGGTTTAAGATTCTATTATAGTATAAAATTCAACTTTATATTTAATGATATTGATACTACTAGAGAATTAAAAAAGCTATTAGACATTTTAAAATTTAAGAATATGGTAAACACAAAATTGAAAGTTAATAGACTGATCAGACACGTTTTCAAATTGATGAACTAAAATTAGTATAACAGATGTCTTATCTACTGAGTTATGTATGAGTTAATACAGGTGTCTTCTAACGGATACCCAAGAGAAGAAGAAGAGATGGAATATGATGAGAAAGTGATGAGAGGGACAAACAGAAGGCTAATGCAAAACATAAGTGAGAATAAAATGAATTATTATTATGATTATTATTTATTTATTTTTAAATGGATTTGATGTGTATGTGAAAAAATGAAAACAAAAAAATTGGAAATATGGTAGATTGTGGAGGGGAATGCAAGCGGCGGTGTGGGGCGCACTCGAGGCCGAACCGGTGCATAAGAGCGTGCGGGACCTGCTGCGCACGGTGCAAATGTGTGCCGCCAGGAACCTCCGGCAACCGTGAAATGTGCGGCACCTGCTACACCGGCATGACCACACATGGCAACAAAACCAAGTGCCCTTAGTTAACTTCCGATTCGGGTGCATCTTGATTATATCTATCTTTTTGCACTTTATTCCGTTGCTCAATTATAGTTTGTGACGTATTTTCTTAAATAATTTTGACTTTTCTTTATCGTTTTTGTAGTGGGTTGCAAAAAGATAATAGAGTCCAATTTGAATTTAATTTTTGTTTTATATTTTCAT

mRNA sequence

GAAAGGCATGGCGGTTCGTAATTTCCTCCTCCTCCTTCTTCTTGGGGTTTTCGTCTTCCTCTGCCTTTCACAGGTGTCTTCTAACGGATACCCAAGAGAAGAAGAAGAGATGGAATATGATGAGAAAGTGATGAGAGGGACAAACAGAAGGCTAATGCAAAACATAAATTGTGGAGGGGAATGCAAGCGGCGGTGTGGGGCGCACTCGAGGCCGAACCGGTGCATAAGAGCGTGCGGGACCTGCTGCGCACGGTGCAAATGTGTGCCGCCAGGAACCTCCGGCAACCGTGAAATGTGCGGCACCTGCTACACCGGCATGACCACACATGGCAACAAAACCAAGTGCCCTTAGTTAACTTCCGATTCGGGTGCATCTTGATTATATCTATCTTTTTGCACTTTATTCCGTTGCTCAATTATAGTTTGTGACGTATTTTCTTAAATAATTTTGACTTTTCTTTATCGTTTTTGTAGTGGGTTGCAAAAAGATAATAGAGTCCAATTTGAATTTAATTTTTGTTTTATATTTTCAT

Coding sequence (CDS)

ATGGCGGTTCGTAATTTCCTCCTCCTCCTTCTTCTTGGGGTTTTCGTCTTCCTCTGCCTTTCACAGGTGTCTTCTAACGGATACCCAAGAGAAGAAGAAGAGATGGAATATGATGAGAAAGTGATGAGAGGGACAAACAGAAGGCTAATGCAAAACATAAATTGTGGAGGGGAATGCAAGCGGCGGTGTGGGGCGCACTCGAGGCCGAACCGGTGCATAAGAGCGTGCGGGACCTGCTGCGCACGGTGCAAATGTGTGCCGCCAGGAACCTCCGGCAACCGTGAAATGTGCGGCACCTGCTACACCGGCATGACCACACATGGCAACAAAACCAAGTGCCCTTAG

Protein sequence

MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP

Homology

[Close]

BLAST of ClCG01G014080 vs. NCBI nr
Match: XP_038895055.1 (snakin-2-like [Benincasa hispida])

HSP 1 Score: 211.1 bits (536), Expect = 5.1e-51
Identity = 103/115 (89.57%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGVFVFLCLSQVSSNGYPRE-EEEMEYDEKVMRGTNRRLMQNINCGGEC 60
           MAVRNFLLLLLLG+FV L LSQVSS+GYP E   EMEYDEKVMRGTNRRLMQNINCG EC
Sbjct: 1   MAVRNFLLLLLLGLFVILSLSQVSSDGYPEEGMMEMEYDEKVMRGTNRRLMQNINCGWEC 60

Query: 61  KRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP 115
           KRRCGAHSRPNRCIRACGTCC+RCKCVP GTSGNREMCGTCYT MTTHGNKTKCP
Sbjct: 61  KRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 115

[Close]

BLAST of ClCG01G014080 vs. NCBI nr
Match: KGN64291.1 (hypothetical protein Csa_013222 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 2.5e-50
Identity = 99/115 (86.09%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGVFVFLCLSQVSSNGYPRE-EEEMEYDEKVMRGTNRRLMQNINCGGEC 60
           MAVR FLLLLLLGVFVFLCLSQVSSNGY  E  +EMEYDEK+MRG NRRLMQ I+CGG+C
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQC 60

Query: 61  KRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP 115
           +RRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT MTTHGN+TKCP
Sbjct: 61  RRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP 115

[Close]

BLAST of ClCG01G014080 vs. NCBI nr
Match: XP_008438104.1 (PREDICTED: snakin-2-like isoform X2 [Cucumis melo])

HSP 1 Score: 204.9 bits (520), Expect = 3.7e-49
Identity = 100/118 (84.75%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREE---EEMEYDE-KVMRGTNRRLMQNINCG 60
           MAVR FLLLLLLGVFVFLCLSQ+SS+GY  +E   +EMEYDE +VMRG NRRLMQ I+CG
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60

Query: 61  GECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP 115
           GECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT MTTHGNKTKCP
Sbjct: 61  GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 118

[Close]

BLAST of ClCG01G014080 vs. NCBI nr
Match: XP_008438094.1 (PREDICTED: snakin-2-like isoform X1 [Cucumis melo])

HSP 1 Score: 197.6 bits (501), Expect = 5.8e-47
Identity = 100/126 (79.37%), Postives = 107/126 (84.92%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGVFVFLCLS--------QVSSNGYPREE---EEMEYDE-KVMRGTNRR 60
           MAVR FLLLLLLGVFVFLCLS        Q+SS+GY  +E   +EMEYDE +VMRG NRR
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQLRRTHITQISSDGYQDQEAGMKEMEYDEDQVMRGANRR 60

Query: 61  LMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHG 115
           LMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT MTTHG
Sbjct: 61  LMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHG 120

[Close]

BLAST of ClCG01G014080 vs. NCBI nr
Match: KAA0055209.1 (snakin-2-like isoform X1 [Cucumis melo var. makuwa] >TYJ99139.1 snakin-2-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 163.3 bits (412), Expect = 1.2e-36
Identity = 74/83 (89.16%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 33  EEMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTS 92
           +EMEYDE +VMRG NRRLMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTS
Sbjct: 2   KEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTS 61

Query: 93  GNREMCGTCYTGMTTHGNKTKCP 115
           GNREMCGTCYT MTTHGNKTKCP
Sbjct: 62  GNREMCGTCYTSMTTHGNKTKCP 84

[Close]

BLAST of ClCG01G014080 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-18
Identity = 55/108 (50.93%), Postives = 59/108 (54.63%), Query Frame = 0


Query: 7   LLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQNINCGGECKRRCGAH 66
           L LLLL     +   QV+SN       E  Y  K            I+CGG C  RC   
Sbjct: 13  LSLLLLEQVQSIQTDQVTSNAI----SEAAYSYK-----------KIDCGGACAARCRLS 72

Query: 67  SRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP 115
           SRP  C RACGTCCARC CVPPGTSGN E C  CY  +TTHGNK KCP
Sbjct: 73  SRPRLCNRACGTCCARCNCVPPGTSGNTETC-PCYASLTTHGNKRKCP 104

[Close]

BLAST of ClCG01G014080 vs. ExPASy Swiss-Prot
Match: Q9LFR3 (Gibberellin-regulated protein 14 OS=Arabidopsis thaliana OX=3702 GN=GASA14 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.9e-18
Identity = 40/62 (64.52%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 53  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTK 112
           I+C   C  RCG HSR N C+RAC TCC RCKCVPPGT GN+E CG+CY  M T G K+K
Sbjct: 214 IDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSK 273

Query: 113 CP 115
           CP
Sbjct: 274 CP 275

[Close]

BLAST of ClCG01G014080 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 6.6e-17
Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 53  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTK 112
           I+CGG CK RC   SR   C+RAC +CC+RC CVPPGTSGN  +C  CY  +TTHG + K
Sbjct: 39  IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGGRLK 98

Query: 113 CP 115
           CP
Sbjct: 99  CP 99

[Close]

BLAST of ClCG01G014080 vs. ExPASy Swiss-Prot
Match: P46687 (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 8.6e-17
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQNINCGGECK 60
           MA+    L+LLL   +  CL+    + +  E+ ++   E V++         I+CGG CK
Sbjct: 1   MAIFRSTLVLLL---ILFCLTTFELHVHAAEDSQV--GEGVVK---------IDCGGRCK 60

Query: 61  RRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP 115
            RC   SRPN C+RAC +CC RC CVPPGT+GN  +C  CY  +TT G + KCP
Sbjct: 61  GRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLKCP 99

[Close]

BLAST of ClCG01G014080 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-16
Identity = 38/62 (61.29%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 53  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTK 112
           I+C   C+ RC   SRPN C RACGTCCARC CV PGTSGN + C  CY  +TTHG + K
Sbjct: 34  IDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKC-PCYGSLTTHGGRRK 93

Query: 113 CP 115
           CP
Sbjct: 94  CP 94

[Close]

BLAST of ClCG01G014080 vs. ExPASy TrEMBL
Match: A0A0A0LW79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045890 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.2e-50
Identity = 99/115 (86.09%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGVFVFLCLSQVSSNGYPRE-EEEMEYDEKVMRGTNRRLMQNINCGGEC 60
           MAVR FLLLLLLGVFVFLCLSQVSSNGY  E  +EMEYDEK+MRG NRRLMQ I+CGG+C
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQC 60

Query: 61  KRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP 115
           +RRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT MTTHGN+TKCP
Sbjct: 61  RRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP 115

[Close]

BLAST of ClCG01G014080 vs. ExPASy TrEMBL
Match: A0A1S3AVJ9 (snakin-2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.8e-49
Identity = 100/118 (84.75%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREE---EEMEYDE-KVMRGTNRRLMQNINCG 60
           MAVR FLLLLLLGVFVFLCLSQ+SS+GY  +E   +EMEYDE +VMRG NRRLMQ I+CG
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60

Query: 61  GECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP 115
           GECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT MTTHGNKTKCP
Sbjct: 61  GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 118

[Close]

BLAST of ClCG01G014080 vs. ExPASy TrEMBL
Match: A0A1S3AW57 (snakin-2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.8e-47
Identity = 100/126 (79.37%), Postives = 107/126 (84.92%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGVFVFLCLS--------QVSSNGYPREE---EEMEYDE-KVMRGTNRR 60
           MAVR FLLLLLLGVFVFLCLS        Q+SS+GY  +E   +EMEYDE +VMRG NRR
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQLRRTHITQISSDGYQDQEAGMKEMEYDEDQVMRGANRR 60

Query: 61  LMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHG 115
           LMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT MTTHG
Sbjct: 61  LMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHG 120

[Close]

BLAST of ClCG01G014080 vs. ExPASy TrEMBL
Match: A0A5A7UP17 (Snakin-2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003450 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.9e-37
Identity = 74/83 (89.16%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 33  EEMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTS 92
           +EMEYDE +VMRG NRRLMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTS
Sbjct: 2   KEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTS 61

Query: 93  GNREMCGTCYTGMTTHGNKTKCP 115
           GNREMCGTCYT MTTHGNKTKCP
Sbjct: 62  GNREMCGTCYTSMTTHGNKTKCP 84

[Close]

BLAST of ClCG01G014080 vs. ExPASy TrEMBL
Match: A0A6J1CAF9 (snakin-2-like OS=Momordica charantia OX=3673 GN=LOC111008909 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.5e-35
Identity = 80/114 (70.18%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQNINCGGECK 60
           MAV  F  LLLLGV VFLCLS+V   G      ++E   + +RG NRRLM+ I+CGG CK
Sbjct: 1   MAVARF--LLLLGVLVFLCLSEVYCEG------QLEEGFEGVRGPNRRLMRFIDCGGSCK 60

Query: 61  RRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP 115
           RRCGAHSRP  CIRACGTCCARC+CVPPGTSGNRE+CG CYTGMTTH NKTKCP
Sbjct: 61  RRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP 106

[Close]

BLAST of ClCG01G014080 vs. TAIR 10
Match: AT5G14920.1 (Gibberellin-regulated family protein )

HSP 1 Score: 91.7 bits (226), Expect = 4.2e-19
Identity = 40/62 (64.52%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 53  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTK 112
           I+C   C  RCG HSR N C+RAC TCC RCKCVPPGT GN+E CG+CY  M T G K+K
Sbjct: 214 IDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSK 273

Query: 113 CP 115
           CP
Sbjct: 274 CP 275

[Close]

BLAST of ClCG01G014080 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 )

HSP 1 Score: 88.2 bits (217), Expect = 4.7e-18
Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 53  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTK 112
           I+CGG CK RC   SR   C+RAC +CC+RC CVPPGTSGN  +C  CY  +TTHG + K
Sbjct: 39  IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGGRLK 98

Query: 113 CP 115
           CP
Sbjct: 99  CP 99

[Close]

BLAST of ClCG01G014080 vs. TAIR 10
Match: AT4G09600.1 (GAST1 protein homolog 3 )

HSP 1 Score: 87.8 bits (216), Expect = 6.1e-18
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQNINCGGECK 60
           MA+    L+LLL   +  CL+    + +  E+ ++   E V++         I+CGG CK
Sbjct: 1   MAIFRSTLVLLL---ILFCLTTFELHVHAAEDSQV--GEGVVK---------IDCGGRCK 60

Query: 61  RRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP 115
            RC   SRPN C+RAC +CC RC CVPPGT+GN  +C  CY  +TT G + KCP
Sbjct: 61  GRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLKCP 99

[Close]

BLAST of ClCG01G014080 vs. TAIR 10
Match: AT2G18420.1 (Gibberellin-regulated family protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.0e-17
Identity = 38/62 (61.29%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 53  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTK 112
           I+C   C+ RC   SRPN C RACGTCCARC CV PGTSGN + C  CY  +TTHG + K
Sbjct: 34  IDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKC-PCYGSLTTHGGRRK 93

Query: 113 CP 115
           CP
Sbjct: 94  CP 94

[Close]

BLAST of ClCG01G014080 vs. TAIR 10
Match: AT1G22690.1 (Gibberellin-regulated family protein )

HSP 1 Score: 85.1 bits (209), Expect = 3.9e-17
Identity = 47/117 (40.17%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 1   MAVRNFLLLLLLGVFVFLCLSQVSSNGYPREEEEMEYDEKVMRGTNRRLMQN---INCGG 60
           M V  F+ L++  + +   L+++SS+         + +++      +R   +   INCG 
Sbjct: 4   MNVVAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGH 63

Query: 61  ECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTGMTTHGNKTKCP 115
            C RRC   SR   C RACG+CCA+C+CVPPGTSGN   C  CY  + THGNK KCP
Sbjct: 64  ACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASC-PCYASIRTHGNKLKCP 119

The following BLAST results are available for this feature:

BLAST of ClCG01G014080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895055.1	5.1e-51	89.57	snakin-2-like [Benincasa hispida]	[more]
KGN64291.1	2.5e-50	86.09	hypothetical protein Csa_013222 [Cucumis sativus]	[more]
XP_008438104.1	3.7e-49	84.75	PREDICTED: snakin-2-like isoform X2 [Cucumis melo]	[more]
XP_008438094.1	5.8e-47	79.37	PREDICTED: snakin-2-like isoform X1 [Cucumis melo]	[more]
KAA0055209.1	1.2e-36	89.16	snakin-2-like isoform X1 [Cucumis melo var. makuwa] >TYJ99139.1 snakin-2-like is...	[more]

BLAST of ClCG01G014080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93X17	2.0e-18	50.93	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
Q9LFR3	5.9e-18	64.52	Gibberellin-regulated protein 14 OS=Arabidopsis thaliana OX=3702 GN=GASA14 PE=1 ...	[more]
P46688	6.6e-17	59.68	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]
P46687	8.6e-17	42.11	Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV...	[more]
F4IQJ4	1.5e-16	61.29	Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ...	[more]

BLAST of ClCG01G014080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW79	1.2e-50	86.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045890 PE=3 SV=1	[more]
A0A1S3AVJ9	1.8e-49	84.75	snakin-2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1	[more]
A0A1S3AW57	2.8e-47	79.37	snakin-2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1	[more]
A0A5A7UP17	5.9e-37	89.16	Snakin-2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1CAF9	1.5e-35	70.18	snakin-2-like OS=Momordica charantia OX=3673 GN=LOC111008909 PE=3 SV=1	[more]

BLAST of ClCG01G014080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14920.1	4.2e-19	64.52	Gibberellin-regulated family protein	[more]
AT4G09610.1	4.7e-18	59.68	GAST1 protein homolog 2	[more]
AT4G09600.1	6.1e-18	42.11	GAST1 protein homolog 3	[more]
AT2G18420.1	1.0e-17	61.29	Gibberellin-regulated family protein	[more]
AT1G22690.1	3.9e-17	40.17	Gibberellin-regulated family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 54..114 e-value: 8.9E-20 score: 70.6
None	No IPR available	PANTHER	PTHR23201:SF18	GIBBERELLIN-REGULATED PROTEIN 2-RELATED	coord: 11..114
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 11..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G014080.1	ClCG01G014080.1	mRNA