ClCG01G013830 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G013830
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Histone H2B
Location	CG_Chr01: 27722493 .. 27723685 (+)
RNA-Seq Expression	ClCG01G013830
Synteny	ClCG01G013830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAGCGGTGGCAACATATCTTTGCAAAAGCCGACCATCAGCGGTAGCGAATCTCTGCAAAAGCTAACGATTAGCGACAGCAGTAAGTAGTAGTTGGCGATGGGACGCGACATTGGGCGAGAGAGCGAGACTGAGAGAGAGTCTGAGAGAGAGCGAGATTGGGAGAGAGCCTTGGTAGAGTGTTGAAACTTCAACCTTGTCCTTGGTTGACGGTTGAAATTTCGATCTTCTTTCTCTTGAAAAACAATCGTATTTTCTAAATATTTTTCAAACAATTATATTTTCCCCAATTACAATGTTAAAATAAAAGATTCAACTACCTAATAACTTATAATTAAAACTAAACTCAAAACTTAATAATTAAAAATATAATATTTTAAAATTTAAAAATCAAATAAAAACTAGATTCAAAATTGAGAAACCAAAAGACTAAAAGAGTTTGGTTTTTTAAATTTTTATAAACATTTTTAATAAAATAATATAGAAATACGGAACTTGAGCCGCTGATCAGAGCGCGCTAAAACCAAATTCTTCAAAAAATTTCACAGCTACGAAATTTCCCAAACGCGCCTCTGGTAAAGTCTCCCCCTAATCTCCACCGTCCACGTCAGCTATCCGCGTGAAACCAGAATCAGCCAATCACGTAGCGCCATCTCCATCCATAAATATCAATCCCCTCAACTCTCTTCCCAGAACTCAATTTTTGCTCCCTTGCCAATTCCATCTCAGAGAAATCTCCAAATCCCTCCGTAAACTTAACAATGGCGCCAAAGGCTGAGAAGAAGCCCGCCGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCGGAGAAGAAGCCGAGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAAGGCCAAGAAGAGCGTTGAGACTTACAAGATCTACATCTTCAAGGTGCTCAAGCAAGTCCATCCCGACATTGGAATCTCCAGCAAGGCCATGGGGATTATGAACAGTTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCCAAGCTTGCTCGCTACAACAAGAAGCCGACCATCACCTCTCGGGAGATCCAAACGGCGGTCCGCCTTGTTCTTCCTGGTGAGTTGGCCAAGCACGCCGTCTCTGAGGGTACAAAGGCTGTTACCAAGTTTACTAGCTCTTAG

mRNA sequence

ATGACCAGCGGTGGCAACATATCTTTGCAAAAGCCGACCATCAGCGGTAGCGAATCTCTGCAAAAGCTAACGATTAGCGACAGCAAGAAATCTCCAAATCCCTCCGTAAACTTAACAATGGCGCCAAAGGCTGAGAAGAAGCCCGCCGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCGGAGAAGAAGCCGAGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAAGGCCAAGAAGAGCGTTGAGACTTACAAGATCTACATCTTCAAGGTGCTCAAGCAAGTCCATCCCGACATTGGAATCTCCAGCAAGGCCATGGGGATTATGAACAGTTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCCAAGCTTGCTCGCTACAACAAGAAGCCGACCATCACCTCTCGGGAGATCCAAACGGCGGTCCGCCTTGTTCTTCCTGGTGAGTTGGCCAAGCACGCCGTCTCTGAGGGTACAAAGGCTGTTACCAAGTTTACTAGCTCTTAG

Coding sequence (CDS)

ATGACCAGCGGTGGCAACATATCTTTGCAAAAGCCGACCATCAGCGGTAGCGAATCTCTGCAAAAGCTAACGATTAGCGACAGCAAGAAATCTCCAAATCCCTCCGTAAACTTAACAATGGCGCCAAAGGCTGAGAAGAAGCCCGCCGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCGGAGAAGAAGCCGAGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAAGGCCAAGAAGAGCGTTGAGACTTACAAGATCTACATCTTCAAGGTGCTCAAGCAAGTCCATCCCGACATTGGAATCTCCAGCAAGGCCATGGGGATTATGAACAGTTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCCAAGCTTGCTCGCTACAACAAGAAGCCGACCATCACCTCTCGGGAGATCCAAACGGCGGTCCGCCTTGTTCTTCCTGGTGAGTTGGCCAAGCACGCCGTCTCTGAGGGTACAAAGGCTGTTACCAAGTTTACTAGCTCTTAG

Protein sequence

MTSGGNISLQKPTISGSESLQKLTISDSKKSPNPSVNLTMAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Homology

[Close]

BLAST of ClCG01G013830 vs. NCBI nr
Match: KAE8652780.1 (hypothetical protein Csa_022685 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 2.4e-63
Identity = 141/144 (97.92%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 38  LTMAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSVETYKIY 97
           L+MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKK+AKKS+ETYKIY
Sbjct: 37  LSMAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIY 96

Query: 98  IFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL 157
           IFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
Sbjct: 97  IFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL 156

Query: 158 VLPGELAKHAVSEGTKAVTKFTSS 182
           VLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 157 VLPGELAKHAVSEGTKAVTKFTSS 180

[Close]

BLAST of ClCG01G013830 vs. NCBI nr
Match: XP_022964641.1 (histone H2B.7-like [Cucurbita moschata] >XP_022970349.1 histone H2B.7-like [Cucurbita maxima] >XP_023519436.1 histone H2B.7-like [Cucurbita pepo subsp. pepo] >KAG6583590.1 Histone H2B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019291.1 Histone H2B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.9 bits (642), Expect = 4.1e-63
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSVETYKIYIF 99
           MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSIETYKIYIF 60

Query: 100 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 159
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 160 PGELAKHAVSEGTKAVTKFTSS 182
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of ClCG01G013830 vs. NCBI nr
Match: XP_038893815.1 (histone H2B.7-like [Benincasa hispida] >XP_038894882.1 histone H2B.7-like [Benincasa hispida] >KAA0032591.1 histone H2B.7 [Cucumis melo var. makuwa] >KGN64852.1 hypothetical protein Csa_022825 [Cucumis sativus] >KAA0032596.1 histone H2B.7 [Cucumis melo var. makuwa] >KAA0032602.1 histone H2B.7 [Cucumis melo var. makuwa] >TYK20883.1 histone H2B.7 [Cucumis melo var. makuwa])

HSP 1 Score: 250.8 bits (639), Expect = 9.2e-63
Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSVETYKIYIF 99
           MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKK+AKKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 100 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 159
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 160 PGELAKHAVSEGTKAVTKFTSS 182
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of ClCG01G013830 vs. NCBI nr
Match: XP_022964661.1 (histone H2B.7-like [Cucurbita moschata] >XP_022970348.1 histone H2B.7-like [Cucurbita maxima] >XP_023519437.1 histone H2B.7-like [Cucurbita pepo subsp. pepo] >KAG6583589.1 Histone H2B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019290.1 Histone H2B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 249.6 bits (636), Expect = 2.1e-62
Identity = 139/142 (97.89%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSVETYKIYIF 99
           MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDA+DKKKK+AKKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDAADKKKKRAKKSIETYKIYIF 60

Query: 100 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 159
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 160 PGELAKHAVSEGTKAVTKFTSS 182
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of ClCG01G013830 vs. NCBI nr
Match: XP_038894881.1 (histone H2B.7 [Benincasa hispida])

HSP 1 Score: 249.6 bits (636), Expect = 2.1e-62
Identity = 139/142 (97.89%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSVETYKIYIF 99
           MAPKAEKKPAEKKPAAEEKKAEKAPAEKKP+AEKKLPKDASDKKKK+AKKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPKAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 100 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 159
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 160 PGELAKHAVSEGTKAVTKFTSS 182
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of ClCG01G013830 vs. ExPASy Swiss-Prot
Match: Q9LZT0 (Histone H2B.7 OS=Arabidopsis thaliana OX=3702 GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 226.9 bits (577), Expect = 1.9e-58
Identity = 131/145 (90.34%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDA---SDKKKKKAKKSVETYKI 99
           MAPKAEKKPAEKKP  E+ KAEKAPAEKKP+A KKLPK+A    DKKKK  KKSVETYKI
Sbjct: 1   MAPKAEKKPAEKKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSVETYKI 60

Query: 100 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 159
           YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVR
Sbjct: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVR 120

Query: 160 LVLPGELAKHAVSEGTKAVTKFTSS 182
           LVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of ClCG01G013830 vs. ExPASy Swiss-Prot
Match: O22582 (Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3)

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-57
Identity = 131/147 (89.12%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAAEEKK-AEKAPAEKKPRAEKKLPKD----ASDKKKKKAKKSVETY 99
           MAPKAEKKPAEKKPA E+K  AEKAPAEKKP+A KKLPK+    A DKKKK+ KKSVETY
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVETY 60

Query: 100 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTA 159
           KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTA
Sbjct: 61  KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTA 120

Query: 160 VRLVLPGELAKHAVSEGTKAVTKFTSS 182
           VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147

[Close]

BLAST of ClCG01G013830 vs. ExPASy Swiss-Prot
Match: P40283 (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 223.8 bits (569), Expect = 1.6e-57
Identity = 132/150 (88.00%), Postives = 137/150 (91.33%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAA-----EEKKAEKAPAEKKPRAEKKLPKDA---SDKKKKKAKKSV 99
           MAPKAEKKPAEKKPA+     E+ KAEKAPAEKKP+A KKLPK+A    DKKKK  KKSV
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 100 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 159
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120

Query: 160 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 182
           QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of ClCG01G013830 vs. ExPASy Swiss-Prot
Match: O23629 (Histone H2B.6 OS=Arabidopsis thaliana OX=3702 GN=H2B PE=1 SV=3)

HSP 1 Score: 223.0 bits (567), Expect = 2.7e-57
Identity = 132/150 (88.00%), Postives = 136/150 (90.67%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAA-----EEKKAEKAPAEKKPRAEKKLPKDA---SDKKKKKAKKSV 99
           MAP+AEKKPAEKKPAA     E+ KAEKAPAEKKP+A KKLPK+A    DKKKK  KKSV
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 100 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 159
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREI 120

Query: 160 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 182
           QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of ClCG01G013830 vs. ExPASy Swiss-Prot
Match: Q9LQQ4 (Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 222.6 bits (566), Expect = 3.5e-57
Identity = 131/148 (88.51%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAA-----EEKKAEKAPAEKKPRAEKKL-PKDASDKKKKKAKKSVET 99
           MAP+AEKKPAEKK AA     E K AEKAPAEKKP+A KKL PK+A DKKKK++KK+VET
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPKEAGDKKKKRSKKNVET 60

Query: 100 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 159
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120

Query: 160 AVRLVLPGELAKHAVSEGTKAVTKFTSS 182
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of ClCG01G013830 vs. ExPASy TrEMBL
Match: A0A6J1I594 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111469341 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.0e-63
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSVETYKIYIF 99
           MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSIETYKIYIF 60

Query: 100 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 159
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 160 PGELAKHAVSEGTKAVTKFTSS 182
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of ClCG01G013830 vs. ExPASy TrEMBL
Match: A0A6J1HJI6 (Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111464657 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.0e-63
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSVETYKIYIF 99
           MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSIETYKIYIF 60

Query: 100 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 159
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 160 PGELAKHAVSEGTKAVTKFTSS 182
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of ClCG01G013830 vs. ExPASy TrEMBL
Match: A0A0A0LV55 (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.5e-63
Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSVETYKIYIF 99
           MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKK+AKKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 100 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 159
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 160 PGELAKHAVSEGTKAVTKFTSS 182
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of ClCG01G013830 vs. ExPASy TrEMBL
Match: A0A5A7SNI2 (Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00170 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.5e-63
Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSVETYKIYIF 99
           MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKK+AKKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 100 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 159
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 160 PGELAKHAVSEGTKAVTKFTSS 182
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of ClCG01G013830 vs. ExPASy TrEMBL
Match: A0A6J1I3M0 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111469340 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.0e-62
Identity = 139/142 (97.89%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSVETYKIYIF 99
           MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDA+DKKKK+AKKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDAADKKKKRAKKSIETYKIYIF 60

Query: 100 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 159
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 160 PGELAKHAVSEGTKAVTKFTSS 182
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of ClCG01G013830 vs. TAIR 10
Match: AT3G46030.1 (Histone superfamily protein )

HSP 1 Score: 226.9 bits (577), Expect = 1.3e-59
Identity = 131/145 (90.34%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDA---SDKKKKKAKKSVETYKI 99
           MAPKAEKKPAEKKP  E+ KAEKAPAEKKP+A KKLPK+A    DKKKK  KKSVETYKI
Sbjct: 1   MAPKAEKKPAEKKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSVETYKI 60

Query: 100 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 159
           YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVR
Sbjct: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVR 120

Query: 160 LVLPGELAKHAVSEGTKAVTKFTSS 182
           LVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of ClCG01G013830 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-58
Identity = 132/150 (88.00%), Postives = 137/150 (91.33%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAA-----EEKKAEKAPAEKKPRAEKKLPKDA---SDKKKKKAKKSV 99
           MAPKAEKKPAEKKPA+     E+ KAEKAPAEKKP+A KKLPK+A    DKKKK  KKSV
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 100 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 159
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120

Query: 160 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 182
           QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of ClCG01G013830 vs. TAIR 10
Match: AT3G45980.1 (Histone superfamily protein )

HSP 1 Score: 223.0 bits (567), Expect = 1.9e-58
Identity = 132/150 (88.00%), Postives = 136/150 (90.67%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAA-----EEKKAEKAPAEKKPRAEKKLPKDA---SDKKKKKAKKSV 99
           MAP+AEKKPAEKKPAA     E+ KAEKAPAEKKP+A KKLPK+A    DKKKK  KKSV
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 100 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 159
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREI 120

Query: 160 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 182
           QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of ClCG01G013830 vs. TAIR 10
Match: AT1G07790.1 (Histone superfamily protein )

HSP 1 Score: 222.6 bits (566), Expect = 2.5e-58
Identity = 131/148 (88.51%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 40  MAPKAEKKPAEKKPAA-----EEKKAEKAPAEKKPRAEKKL-PKDASDKKKKKAKKSVET 99
           MAP+AEKKPAEKK AA     E K AEKAPAEKKP+A KKL PK+A DKKKK++KK+VET
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPKEAGDKKKKRSKKNVET 60

Query: 100 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 159
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120

Query: 160 AVRLVLPGELAKHAVSEGTKAVTKFTSS 182
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of ClCG01G013830 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein )

HSP 1 Score: 218.8 bits (556), Expect = 3.6e-57
Identity = 130/151 (86.09%), Postives = 135/151 (89.40%), Query Frame = 0


Query: 40  MAPK-----AEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDA----SDKKKKKAKKS 99
           MAPK     AEKKPAEK PA EEK AEKAPAEKKP+A KKLPK+A     +KKKK+ KKS
Sbjct: 1   MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60

Query: 100 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 159
            ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSRE
Sbjct: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 160 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 182
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

The following BLAST results are available for this feature:

BLAST of ClCG01G013830 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652780.1	2.4e-63	97.92	hypothetical protein Csa_022685 [Cucumis sativus]	[more]
XP_022964641.1	4.1e-63	99.30	histone H2B.7-like [Cucurbita moschata] >XP_022970349.1 histone H2B.7-like [Cucu...	[more]
XP_038893815.1	9.2e-63	98.59	histone H2B.7-like [Benincasa hispida] >XP_038894882.1 histone H2B.7-like [Benin...	[more]
XP_022964661.1	2.1e-62	97.89	histone H2B.7-like [Cucurbita moschata] >XP_022970348.1 histone H2B.7-like [Cucu...	[more]
XP_038894881.1	2.1e-62	97.89	histone H2B.7 [Benincasa hispida]	[more]

BLAST of ClCG01G013830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZT0	1.9e-58	90.34	Histone H2B.7 OS=Arabidopsis thaliana OX=3702 GN=At3g46030 PE=1 SV=3	[more]
O22582	1.2e-57	89.12	Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3	[more]
P40283	1.6e-57	88.00	Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5	[more]
O23629	2.7e-57	88.00	Histone H2B.6 OS=Arabidopsis thaliana OX=3702 GN=H2B PE=1 SV=3	[more]
Q9LQQ4	3.5e-57	88.51	Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3	[more]

BLAST of ClCG01G013830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I594	2.0e-63	99.30	Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111469341 PE=3 SV=1	[more]
A0A6J1HJI6	2.0e-63	99.30	Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111464657 PE=3 SV=1	[more]
A0A0A0LV55	4.5e-63	98.59	Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1	[more]
A0A5A7SNI2	4.5e-63	98.59	Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00170 PE...	[more]
A0A6J1I3M0	1.0e-62	97.89	Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111469340 PE=3 SV=1	[more]

BLAST of ClCG01G013830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46030.1	1.3e-59	90.34	Histone superfamily protein	[more]
AT5G59910.1	1.1e-58	88.00	Histone superfamily protein	[more]
AT3G45980.1	1.9e-58	88.00	Histone superfamily protein	[more]
AT1G07790.1	2.5e-58	88.51	Histone superfamily protein	[more]
AT2G28720.1	3.6e-57	86.09	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 94..112 score: 80.55 coord: 152..165 score: 92.45 coord: 135..152 score: 76.51 coord: 113..133 score: 75.74 coord: 165..178 score: 92.65
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 84..180 e-value: 8.0E-73 score: 257.9
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 44..181
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 149..171
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 37..181 e-value: 1.3E-57 score: 195.2
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 66..181
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 43..157 e-value: 2.5E-22 score: 79.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..89
None	No IPR available	PANTHER	PTHR23428:SF278	HISTONE H2B	coord: 44..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G013830.2	ClCG01G013830.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity