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ClCG01G013830 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCAGCGGTGGCAACATATCTTTGCAAAAGCCGACCATCAGCGGTAGCGAATCTCTGCAAAAGCTAACGATTAGCGACAGCAGTAAGTAGTAGTTGGCGATGGGACGCGACATTGGGCGAGAGAGCGAGACTGAGAGAGAGTCTGAGAGAGAGCGAGATTGGGAGAGAGCCTTGGTAGAGTGTTGAAACTTCAACCTTGTCCTTGGTTGACGGTTGAAATTTCGATCTTCTTTCTCTTGAAAAACAATCGTATTTTCTAAATATTTTTCAAACAATTATATTTTCCCCAATTACAATGTTAAAATAAAAGATTCAACTACCTAATAACTTATAATTAAAACTAAACTCAAAACTTAATAATTAAAAATATAATATTTTAAAATTTAAAAATCAAATAAAAACTAGATTCAAAATTGAGAAACCAAAAGACTAAAAGAGTTTGGTTTTTTAAATTTTTATAAACATTTTTAATAAAATAATATAGAAATACGGAACTTGAGCCGCTGATCAGAGCGCGCTAAAACCAAATTCTTCAAAAAATTTCACAGCTACGAAATTTCCCAAACGCGCCTCTGGTAAAGTCTCCCCCTAATCTCCACCGTCCACGTCAGCTATCCGCGTGAAACCAGAATCAGCCAATCACGTAGCGCCATCTCCATCCATAAATATCAATCCCCTCAACTCTCTTCCCAGAACTCAATTTTTGCTCCCTTGCCAATTCCATCTCAGAGAAATCTCCAAATCCCTCCGTAAACTTAACAATGGCGCCAAAGGCTGAGAAGAAGCCCGCCGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCGGAGAAGAAGCCGAGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAAGGCCAAGAAGAGCGTTGAGACTTACAAGATCTACATCTTCAAGGTGCTCAAGCAAGTCCATCCCGACATTGGAATCTCCAGCAAGGCCATGGGGATTATGAACAGTTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCCAAGCTTGCTCGCTACAACAAGAAGCCGACCATCACCTCTCGGGAGATCCAAACGGCGGTCCGCCTTGTTCTTCCTGGTGAGTTGGCCAAGCACGCCGTCTCTGAGGGTACAAAGGCTGTTACCAAGTTTACTAGCTCTTAG ATGACCAGCGGTGGCAACATATCTTTGCAAAAGCCGACCATCAGCGGTAGCGAATCTCTGCAAAAGCTAACGATTAGCGACAGCAAGAAATCTCCAAATCCCTCCGTAAACTTAACAATGGCGCCAAAGGCTGAGAAGAAGCCCGCCGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCGGAGAAGAAGCCGAGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAAGGCCAAGAAGAGCGTTGAGACTTACAAGATCTACATCTTCAAGGTGCTCAAGCAAGTCCATCCCGACATTGGAATCTCCAGCAAGGCCATGGGGATTATGAACAGTTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCCAAGCTTGCTCGCTACAACAAGAAGCCGACCATCACCTCTCGGGAGATCCAAACGGCGGTCCGCCTTGTTCTTCCTGGTGAGTTGGCCAAGCACGCCGTCTCTGAGGGTACAAAGGCTGTTACCAAGTTTACTAGCTCTTAG ATGACCAGCGGTGGCAACATATCTTTGCAAAAGCCGACCATCAGCGGTAGCGAATCTCTGCAAAAGCTAACGATTAGCGACAGCAAGAAATCTCCAAATCCCTCCGTAAACTTAACAATGGCGCCAAAGGCTGAGAAGAAGCCCGCCGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCGGAGAAGAAGCCGAGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAAGGCCAAGAAGAGCGTTGAGACTTACAAGATCTACATCTTCAAGGTGCTCAAGCAAGTCCATCCCGACATTGGAATCTCCAGCAAGGCCATGGGGATTATGAACAGTTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCCAAGCTTGCTCGCTACAACAAGAAGCCGACCATCACCTCTCGGGAGATCCAAACGGCGGTCCGCCTTGTTCTTCCTGGTGAGTTGGCCAAGCACGCCGTCTCTGAGGGTACAAAGGCTGTTACCAAGTTTACTAGCTCTTAG MTSGGNISLQKPTISGSESLQKLTISDSKKSPNPSVNLTMAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Homology
BLAST of ClCG01G013830 vs. NCBI nr
Match: KAE8652780.1 (hypothetical protein Csa_022685 [Cucumis sativus]) HSP 1 Score: 252.7 bits (644), Expect = 2.4e-63 Identity = 141/144 (97.92%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of ClCG01G013830 vs. NCBI nr
Match: XP_022964641.1 (histone H2B.7-like [Cucurbita moschata] >XP_022970349.1 histone H2B.7-like [Cucurbita maxima] >XP_023519436.1 histone H2B.7-like [Cucurbita pepo subsp. pepo] >KAG6583590.1 Histone H2B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019291.1 Histone H2B, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 251.9 bits (642), Expect = 4.1e-63 Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of ClCG01G013830 vs. NCBI nr
Match: XP_038893815.1 (histone H2B.7-like [Benincasa hispida] >XP_038894882.1 histone H2B.7-like [Benincasa hispida] >KAA0032591.1 histone H2B.7 [Cucumis melo var. makuwa] >KGN64852.1 hypothetical protein Csa_022825 [Cucumis sativus] >KAA0032596.1 histone H2B.7 [Cucumis melo var. makuwa] >KAA0032602.1 histone H2B.7 [Cucumis melo var. makuwa] >TYK20883.1 histone H2B.7 [Cucumis melo var. makuwa]) HSP 1 Score: 250.8 bits (639), Expect = 9.2e-63 Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of ClCG01G013830 vs. NCBI nr
Match: XP_022964661.1 (histone H2B.7-like [Cucurbita moschata] >XP_022970348.1 histone H2B.7-like [Cucurbita maxima] >XP_023519437.1 histone H2B.7-like [Cucurbita pepo subsp. pepo] >KAG6583589.1 Histone H2B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019290.1 Histone H2B, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 249.6 bits (636), Expect = 2.1e-62 Identity = 139/142 (97.89%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of ClCG01G013830 vs. NCBI nr
Match: XP_038894881.1 (histone H2B.7 [Benincasa hispida]) HSP 1 Score: 249.6 bits (636), Expect = 2.1e-62 Identity = 139/142 (97.89%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of ClCG01G013830 vs. ExPASy Swiss-Prot
Match: Q9LZT0 (Histone H2B.7 OS=Arabidopsis thaliana OX=3702 GN=At3g46030 PE=1 SV=3) HSP 1 Score: 226.9 bits (577), Expect = 1.9e-58 Identity = 131/145 (90.34%), Postives = 134/145 (92.41%), Query Frame = 0
BLAST of ClCG01G013830 vs. ExPASy Swiss-Prot
Match: O22582 (Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3) HSP 1 Score: 224.2 bits (570), Expect = 1.2e-57 Identity = 131/147 (89.12%), Postives = 137/147 (93.20%), Query Frame = 0
BLAST of ClCG01G013830 vs. ExPASy Swiss-Prot
Match: P40283 (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5) HSP 1 Score: 223.8 bits (569), Expect = 1.6e-57 Identity = 132/150 (88.00%), Postives = 137/150 (91.33%), Query Frame = 0
BLAST of ClCG01G013830 vs. ExPASy Swiss-Prot
Match: O23629 (Histone H2B.6 OS=Arabidopsis thaliana OX=3702 GN=H2B PE=1 SV=3) HSP 1 Score: 223.0 bits (567), Expect = 2.7e-57 Identity = 132/150 (88.00%), Postives = 136/150 (90.67%), Query Frame = 0
BLAST of ClCG01G013830 vs. ExPASy Swiss-Prot
Match: Q9LQQ4 (Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3) HSP 1 Score: 222.6 bits (566), Expect = 3.5e-57 Identity = 131/148 (88.51%), Postives = 137/148 (92.57%), Query Frame = 0
BLAST of ClCG01G013830 vs. ExPASy TrEMBL
Match: A0A6J1I594 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111469341 PE=3 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 2.0e-63 Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of ClCG01G013830 vs. ExPASy TrEMBL
Match: A0A6J1HJI6 (Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111464657 PE=3 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 2.0e-63 Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of ClCG01G013830 vs. ExPASy TrEMBL
Match: A0A0A0LV55 (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 4.5e-63 Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of ClCG01G013830 vs. ExPASy TrEMBL
Match: A0A5A7SNI2 (Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00170 PE=3 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 4.5e-63 Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of ClCG01G013830 vs. ExPASy TrEMBL
Match: A0A6J1I3M0 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111469340 PE=3 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 1.0e-62 Identity = 139/142 (97.89%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of ClCG01G013830 vs. TAIR 10
Match: AT3G46030.1 (Histone superfamily protein ) HSP 1 Score: 226.9 bits (577), Expect = 1.3e-59 Identity = 131/145 (90.34%), Postives = 134/145 (92.41%), Query Frame = 0
BLAST of ClCG01G013830 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein ) HSP 1 Score: 223.8 bits (569), Expect = 1.1e-58 Identity = 132/150 (88.00%), Postives = 137/150 (91.33%), Query Frame = 0
BLAST of ClCG01G013830 vs. TAIR 10
Match: AT3G45980.1 (Histone superfamily protein ) HSP 1 Score: 223.0 bits (567), Expect = 1.9e-58 Identity = 132/150 (88.00%), Postives = 136/150 (90.67%), Query Frame = 0
BLAST of ClCG01G013830 vs. TAIR 10
Match: AT1G07790.1 (Histone superfamily protein ) HSP 1 Score: 222.6 bits (566), Expect = 2.5e-58 Identity = 131/148 (88.51%), Postives = 137/148 (92.57%), Query Frame = 0
BLAST of ClCG01G013830 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein ) HSP 1 Score: 218.8 bits (556), Expect = 3.6e-57 Identity = 130/151 (86.09%), Postives = 135/151 (89.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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