ClCG01G013520 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCACGAGGCACCAAAACTGCTGGTAATGTGGCTACATCAAGTCAGATGCATCATCAGACATAGGTTGCAGAAGAAAAGGGCAATGTTGCCGCATTATTTGTCCAGCATCGTGAGGGGAAAGCCCCCGTGGTTGAAGAGGAGGACATTGCTCCTCTTTTCGAGTATGAGACAAGAGGGTGAACACGTGAAGAAAGTTTGTTGGAGTCCACGTCAACTGAAGATTTGGAAGAGATTGAGGGGGCCTCGAGGCCTAAGGTGATGGCTCCAAGGAGAGTCACTAGATCTGCCTCTACAGCTAAGAGGAAGGCAAATTCGAGCTTAGCTGCCCTGACTCAGAAAAGGGTAAAAGCAAAGCATGCACAACGCATTGTGCTTTCTTCGTCTAGTGAATTTGAAGGCGAGAACGAGGTTGAGTAGCGAAAGGAGGCCCTTAAAAGGAGGAAAATTTTTTATGAATACAAATTCTCAGGGAGGAACGACACCCTACCCGAGTATGTGAGGATCTTAATTAAGCATTATGAGTGGGAAGCACTAACCAGCCCACCTACACCTGCCAGCAGATCTCTGGTTGAAGACTTCTACCTTGGGTTGCGGCCTGAGAAGGACATCTTTGTGGTCCAAGTAGTCCAAGTGGATTTCTCTCTTGAGGCCATCAATGAGGTGTATATGGTCCCTGATGAAGGAAGGGATGAGTGCAGAAAACGAATGTACACTCCCACAGAGGAGCAGGTGGCCAAGGCACTCAAGCTGGTGGCGCTTAAAGGAGCTAAGTGGGTCATATCGCCCACAGGATGCAGGACACTACGACCAGATGTCATAAGAGACAACCTTGCCATCTGGCTATATTTCGTCAAGCATCGCATCATGCCCACCACACATGACTCCACTATATCCTTGAAACGAGTCATGTTCCTCTACAACTTAAGAAAGGTCCTCCCAATTGTTGGGATTTATGTCCTAAATCTTGTAGTCTATGTAATTTTGTAAATAAATTAATAAATAAAGTATTTTTTAATTGTTATTTGTTTGCATAACTCAAAATCCAATAAACTAAGATCCTAGGTTATTTAATGTATCTTGAACGATATGTGGTTGACATATCAATGGATCATGTTCAAGAAATAACCTAAAAGATCTATAGTATATGGGTGAGATTGGGTGCCTCATCCTAGTACTATGGATACAACCTACTTTGTAAGTGTTACAAATGTTGTAAGTGTTACAAATGGTTTGATCCAAATCATTCGTGCAATGACATGTAAGTGGGGGTATCCTATACAGTGAGTCTGTATAAGATTGGACCACAAAATTAAATCTCTCTTTATAAATCCATTAACTGAAGAGTTTTATATTTCAAATGAGAACCATGTAACTTGATCTCAATCCTTAGTGAATTATGAACTCCTGTTCATGAGGATCATTTTTTGACTTGTATGGATGAGAGTGGTCTTAGCTACCAACTTAATATGTCTACCATTTTGGGAATGATTCCGAGTGAGGAGTTGGGAACATAAATTCACAAGATGAATTCACTTCTTCCCTACTCTAGGGAAAGTAGATAGGTTGTTCTCTTAAGTGATGATTTCGAAACTTGAACAATGAGGCCTTACCCTCTCACTGATTTGAGATGAACTTTGTTTATGGTTGGACCATAGACAGTATTGTTCATTAGAGGATCAGTGGTACTTAAGGTGCAGAGGTAA ATGGTGCACGAGGCACCAAAACTGCTGGTTGCAGAAGAAAAGGGCAATGTTGCCGCATTATTTGTCCAGCATCGTGAGGGGAAAGCCCCCGTGGTTGAAGAGGAGGACATTGCTCCTCTTTTCGATTTGTTGGAGTCCACGTCAACTGAAGATTTGGAAGAGATTGAGGGGGCCTCGAGGCCTAAGGTGATGGCTCCAAGGAGAGTCACTAGATCTGCCTCTACAGCTAAGAGGAAGGCAAATTCGAGCTTAGCTGCCCTGACTCAGAAAAGGGTAAAAGCAAAGCATGCACAACGCATTGTGCTTTCTTCGTCTAGTGAATTTGAAGGCGAGAACGAGGTTGACCCACCTACACCTGCCAGCAGATCTCTGGTTGAAGACTTCTACCTTGGGTTGCGGCCTGAGAAGGACATCTTTGTGGTCCAAGTAGTCCAAGTGGATTTCTCTCTTGAGGCCATCAATGAGGTGTATATGGTCCCTGATGAAGGAAGGGATGAGTGCAGAAAACGAATGTACACTCCCACAGAGGAGCAGGTGGCCAAGGCACTCAAGCTGGTGGCGCTTAAAGGAGCTAAGTGGGTCATATCGCCCACAGGATGCAGGACACTACGACCAGATGTCATAAGAGACAACCTTGCCATCTGGCTATATTTCGTCAAGCATCGCATCATGCCCACCACACATGACTCCACTATATCCTTGAAACGAGTCATGTTCCTCTACAACTTAAGAAAGACAGTATTGTTCATTAGAGGATCAGTGGTACTTAAGGTGCAGAGGTAA ATGGTGCACGAGGCACCAAAACTGCTGGTTGCAGAAGAAAAGGGCAATGTTGCCGCATTATTTGTCCAGCATCGTGAGGGGAAAGCCCCCGTGGTTGAAGAGGAGGACATTGCTCCTCTTTTCGATTTGTTGGAGTCCACGTCAACTGAAGATTTGGAAGAGATTGAGGGGGCCTCGAGGCCTAAGGTGATGGCTCCAAGGAGAGTCACTAGATCTGCCTCTACAGCTAAGAGGAAGGCAAATTCGAGCTTAGCTGCCCTGACTCAGAAAAGGGTAAAAGCAAAGCATGCACAACGCATTGTGCTTTCTTCGTCTAGTGAATTTGAAGGCGAGAACGAGGTTGACCCACCTACACCTGCCAGCAGATCTCTGGTTGAAGACTTCTACCTTGGGTTGCGGCCTGAGAAGGACATCTTTGTGGTCCAAGTAGTCCAAGTGGATTTCTCTCTTGAGGCCATCAATGAGGTGTATATGGTCCCTGATGAAGGAAGGGATGAGTGCAGAAAACGAATGTACACTCCCACAGAGGAGCAGGTGGCCAAGGCACTCAAGCTGGTGGCGCTTAAAGGAGCTAAGTGGGTCATATCGCCCACAGGATGCAGGACACTACGACCAGATGTCATAAGAGACAACCTTGCCATCTGGCTATATTTCGTCAAGCATCGCATCATGCCCACCACACATGACTCCACTATATCCTTGAAACGAGTCATGTTCCTCTACAACTTAAGAAAGACAGTATTGTTCATTAGAGGATCAGTGGTACTTAAGGTGCAGAGGTAA MVHEAPKLLVAEEKGNVAALFVQHREGKAPVVEEEDIAPLFDLLESTSTEDLEEIEGASRPKVMAPRRVTRSASTAKRKANSSLAALTQKRVKAKHAQRIVLSSSSEFEGENEVDPPTPASRSLVEDFYLGLRPEKDIFVVQVVQVDFSLEAINEVYMVPDEGRDECRKRMYTPTEEQVAKALKLVALKGAKWVISPTGCRTLRPDVIRDNLAIWLYFVKHRIMPTTHDSTISLKRVMFLYNLRKTVLFIRGSVVLKVQR Homology
BLAST of ClCG01G013520 vs. NCBI nr
Match: PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]) HSP 1 Score: 79.3 bits (194), Expect = 5.3e-11 Identity = 46/121 (38.02%), Postives = 69/121 (57.02%), Query Frame = 0
BLAST of ClCG01G013520 vs. NCBI nr
Match: XP_038904385.1 (uncharacterized protein LOC120090747 [Benincasa hispida]) HSP 1 Score: 77.0 bits (188), Expect = 2.6e-10 Identity = 43/120 (35.83%), Postives = 64/120 (53.33%), Query Frame = 0
BLAST of ClCG01G013520 vs. NCBI nr
Match: PON62892.1 (hypothetical protein PanWU01x14_135680 [Parasponia andersonii]) HSP 1 Score: 77.0 bits (188), Expect = 2.6e-10 Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 0
BLAST of ClCG01G013520 vs. NCBI nr
Match: XP_038876674.1 (chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]) HSP 1 Score: 77.0 bits (188), Expect = 2.6e-10 Identity = 67/250 (26.80%), Postives = 112/250 (44.80%), Query Frame = 0
BLAST of ClCG01G013520 vs. NCBI nr
Match: PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii]) HSP 1 Score: 74.3 bits (181), Expect = 1.7e-09 Identity = 43/130 (33.08%), Postives = 71/130 (54.62%), Query Frame = 0
BLAST of ClCG01G013520 vs. ExPASy TrEMBL
Match: A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.6e-11 Identity = 46/121 (38.02%), Postives = 69/121 (57.02%), Query Frame = 0
BLAST of ClCG01G013520 vs. ExPASy TrEMBL
Match: A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.3e-10 Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 0
BLAST of ClCG01G013520 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 8.2e-10 Identity = 45/130 (34.62%), Postives = 72/130 (55.38%), Query Frame = 0
BLAST of ClCG01G013520 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 8.2e-10 Identity = 43/130 (33.08%), Postives = 71/130 (54.62%), Query Frame = 0
BLAST of ClCG01G013520 vs. ExPASy TrEMBL
Match: A0A5D2FHZ7 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A08G093000v1 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.4e-09 Identity = 38/135 (28.15%), Postives = 74/135 (54.81%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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