ClCG01G013460 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG01G013460
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTranscription termination factor 4
LocationCG_Chr01: 26639427 .. 26644079 (-)
RNA-Seq ExpressionClCG01G013460
SyntenyClCG01G013460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCACCCCCTAGTGAGGTTCGGAGGAACTGTCTCCCATTCTCTTTCGAAAAATAAGGCGGCTCATCTCGCTCAACTGCTTACTGCTCGAGAGCGCAAGAGTGCTCCTTGCTCGAATTCACAGGCTAGGGCTCATCTACTACGATATTACAGAATCAGTGGTCTTCAAGCCTACTGTGTACGATTAACCAGTCTTGCGGCAGCAAAAGGATTAGATGTCCCCCATGCTACGGTTCCTTGCGTGGGAATTGGTACTTCGAGCCTACTACATATGATTAGCTAGTCTTGTGGCGGCAAAAGACAAACGTCCCCCATGCTATGGTGACCTGCGTGGAGTGAACTTACCACTCCTAGTTTTCCTCATAGGGATAGACATGCATCTTTTTTACGAGGTAAACAACTCATTCGTAGTCAACTTGGTTATAAAAGAGAGATATGATTATGCCTATATTAGTATTTGCATAAGGAGGTGTTGATAAAAATTCTACTATTATGTTTAAAAGTATGATAATTTGAAGAAAAATGGAAAAAGACAGTGAAAATTTTAATTTTTTTCACTTGTGTTTGAGGTAATGAGTGAAATTGTGAAGTATTGGAATCCACTAAGTAAGAAGCTAATAAAATAGCAAATTAATATTTTTTTAGTTGTACGGGCCATGAACTACGAAGATAACCATCAATGGAGTCGATTTTGAGCTAAAATCAGCAAAAACTGCCGACTAATCGCGTTTCAGAAAAAGGTTAGTTACTCCAGCCGACTATCCATAATTAGCCGATTAATTATGGAGTGGAGCATTAATCTATGAACTTTTAGAATGGTAGTCGATGTCTTTATTTATTGAGTTATACTTGAATCAATATCTGTTGTTTGTTTCAATTAATTAAGTTTGTGTCAAATGTTTTCTTTTTAGGATTTGTTTAATGTCTTGTCTCTATTACATATTACTCAGTTTTATTTTTCTTCCAAATAAAGTTTGGATGAGGTGATTTGAAACTCCATCACTACATTGTTGAACTAGCCGAAATAACTAAATAATAATTTCTTAGTATAACAAGTTTAAAATATTGCTTTTAAAAGTTGGATGATCATGAGGTGTTAACAATAAATAAAGGTAGTATAAAATTTTTTTTAAATGCACTATTTTTTAAATCTTCATACTCTAGTTTTCTCTATTTTTATTCCAATTGGCACCGATCAACTCACTCCTTAAATCGACCGACCAAAATTGGTTTGATCAATTTTGGTCAATTGAATCGATTTTCAGATAAATTACTATGATCATCCCTACCACAAACTTTGTTCATCAAATAAGGAGTTGAGTTCACAACTTCACTCCTCCCAATTTCAACTCATTGTATCAAACGCTCGTAAGTTTTAATTTAGATATAGATGATGGAACCAGTATGATTTCATACTATAAAGAATTTGAATTTAATTGAGTGGATAAAATTTTTATGGTAAAATTCATTATTCAATCAAGACATGCATTAGGTTTAATTTTTAGTTTAATCATGATGGGAGTGGAACATTTTGATCAATCAACTTTTAGGGTCGTAATTGATGTCTTTATTTCTTAAGTTGTACTCAAATCAACATCTCCTACTTGGTTGAACAAAATAAGTTTATGGCTAATGCCATTTTTCTAGAAATTTGTGTAATGTCTTGTCTCTAGTATGTATTGCCCATAGTTTTATTTTCTTTCAAACAAAGTTTCAATAAGGTGATTGAAACTTTATTACTACATTGTTGGCCTAACAAAAATATTTATCGAAGTCGTTGAATGTTACAAGGACATTCTCTTCCTTACCCCTCATGTGAATGTTCTTAGGCTTTCTTTTAGTAAAAGAGTTTTTTATTGTTTTCAGATGGGATGTTTTTTGTTTCACTAAAAACTTAATTTACATGTGCCTTAATATACTTAGGAAGAAAACTAACAGAAATGATATTCTCGTCATGTCATGTAACAAGTTTTAAAATATTATAAAGTATAAAAAGAAAATAAATAAATAAAGGAAAAATTAGCCTTTGATATTTGAGTTTTTAAGAATGTGTGTATTTAGTCTCTAATGTTTCAAATGGGTCATTTTACTCTCTAAATTTTCATAAATATATTTAAAAGGTTTTTCTACTAAAGATTCTATTAAATTTAAACAAAAAAAGTAGACTAGATTGATGATGTGGCTTAATGACTTGGAAAATTTTTCCAAGTCATCAAGCCAGCCATCTATTGAGTCAAGTTTTTTTTTTTTTTATTTAAGTTTAATAGAGTTTTTAATAAAGGGACCTTCTACATAAAATTTGGGGGCTAAAATGATAAATTTGAAACAACAGCAACTAAATGCATGTATTCTTAAAAACTTAGGGACCAAAAAAGATTATTTTGTTATATTTCAGTAAAATTCAGGGGTTAAAACAGAGCAGGGTCAAACCTCGACCGCAATAGGAACAGAAATAAACCAGTTGCCAAACACCAGACATTTTCGAATTCCGCAACGGAGCGAGCTCATTCGTCTCTCTCTCTCTCTCCAGTTTCCAGCTCCGGCGACAAAAATGCTGCAGTTTCCGGCTTTCATGACACAGTACCCTTGGTCTACAAGGACAATTCCCACGTCGTTTTTACTGCCGTCTCAGTGGCCACAACCCCAAAACGAAGAGCTACTGCTCGCCATGGAAGAGTCTGATTTTGAAGAAAAGGTACTCTATCTCTAGTTACCATTCTCTTTTCAATAAACCCTAATGCTCTTTCTTCTCTGGCATTTTATTTGTACAATCTCCTGCTTGGACTTGGGAAATGCGTAGGGATCGAATGTGAAATCATCGGAATGTTGATGTTAGTTTAATTACGGCATATTGTGGATTCTCCCATGCGGTCCGCTCTTGATTGTCACCATTTTAAATTATGTTTGAGTATTTGTGATTTTATCTTCGTTTTCTTCCGCATTCATGTACACGAACAAGTTTTTGGGGTATTTCTGAGAATTGGACTGATCCACGAGTAAAGACCTTATATACATCGAATGTCAAGTTGAAGTTAGTGCAATTGATTGAAATCGACGCTTGCTCAAAAGACTGTTGTTGAATTAAATCTGACTCTCGCCGTTAGGTTTTCACCTTTCTCACTTTTGCATCTCTAACAGTTTTCCCTTGGAGGTCTGCTTTGAATATTTGATTTTTGAGGAATTTGCTGCTATAATCATTGAAACTTGGACTGAATTGCTGTTAATTACTTCTTCATCAATATTTTGTTTATGTGAGGCTGAAACCATGGAGAAAACTTGTTAATATTCTACTTGAAGGGTTTGTTGCCGAGCACGATCTATTCCCATTTCTAGGTTTAGCTTGAATATATTGAATATGATATTTATGTTCAACCTTGTGTTTTGCAAATGGACAAAACAACTAAGGAAAAACTTCAAAAAGCCCAACCAAACTGGAAACTATTGGCCTTGAACGAGCTAACGGAAACCCACAGAAAATGAAGAATGGTGAGATCACGCCTAAAACAACATCCATCCATTGAAAGACTCACTGAAAGGCTCCAAAGGAAACTTCAACCGAGGAACTTCTGTTCAACCTTGTGTTTCGAAATTCAAACCTAAAGAAAGGGGATGTTCCAATGTGTAGTATGGTATTTTCCATGAGCAAGGCTGTTTGAGTACTCATATGATTATATTTGTGATGACTTATTAACCTTTAAGGTTTTGGGTTCATTAGTGATTTAAAATTGTGTAACTCGGGTTGTGGAATTGTCAGCCCAAAACTTGCCTACTTGTAGCACAGACTAAGTTACAAATCCATACATCTAACACATTTGAAGCAAACTCAAGTTTCTATAATGTATTCCTTTCTACAATCCAATGCATACCACAGGTTCACTTTCAAACTCAAGTTTCTATAATGTATTCCTTTCTACAATCCAACGCATACCACAGGTTCACTTTCCCACCTGACTCCAAACTTCATTATCCCAAGTTTATAAACTGGAGCCAAAAATTTACTAAAAATGTTAGCTCTATTTGTACTTTTGCCGATTATGATTTCTTGGGTGTGATATTATTAAATGTTGTGCGACCTTCTATCTTCCTTCTATGTGATAAGTGTGGCGGTGATTAGGCCTTCATTCAACTACCCTCTTAAAGCCTTAGAAGGAAGAAGGTAAGGGGCTTCTGTTCTCACTCTTTCACTAATTCAATTGGATTCCGACCTCGAATCAGAGGAACTCAACTAACAAACAATGCAATTCTCCATGTGCACTATTGCAATTTTGTAAGCTCTTCTCTCACTTGTGTGTATTACTATCATGGCAGTGCAATGAAATTAGGAAGACAAACAGCAACCTGGTTGTCATTGGCAAAATGACTGCTGACAATGATAAGGAAGACATAGAGGCAGAAGATGATGATGCTGACAATGCTGAGGAATCCGAGGCTGAAGAATTCGAGCAGGAAACTGGTTAATATGCATCTTTATTTCCTTTCCTGTCTTTACTCTTCAGAATCCTCAATTTACTAGTTTTTTTCTGTTTGTTAACTACCTTATAGCTTCAAATTTATGTGCCTCTTGAGCCGATGTTTCTTTCTTACTTTGTGTTAAAAGTTATTGTTATTGTATTTTCCACTCCATTTGCTTTTAACCAATTGAAAATCTTCC

mRNA sequence

ATGAGTCACCCCCTAGTGAGGTTCGGAGGAACTGTCTCCCATTCTCTTTCGAAAAATAAGGCGGCTCATCTCGCTCAACTGCTTACTGCTCGAGAGCGCAAGAGTGCTCCTTGCTCGAATTCACAGGCTAGGGCTCATCTACTACGATATTACAGAATCAGTGGTCTTCAAGCCTACTGTGTACGATTAACCAGTCTTGCGGCAGCAAAAGGATTAGATGTCCCCCATGCTACGGTTCCTTGCGTGGGAATTGGGGTTAAAACAGAGCAGGGTCAAACCTCGACCGCAATAGGAACAGAAATAAACCAGTTGCCAAACACCAGACATTTTCGAATTCCGCAACGGAGCGAGCTCATTCGTCTCTCTCTCTCTCTCCAGTTTCCAGCTCCGGCGACAAAAATGCTGCAGTTTCCGGCTTTCATGACACAGTACCCTTGGTCTACAAGGACAATTCCCACGTCGTTTTTACTGCCGTCTCAGTGGCCACAACCCCAAAACGAAGAGCTACTGCTCGCCATGGAAGAGTCTGATTTTGAAGAAAAGTGCAATGAAATTAGGAAGACAAACAGCAACCTGGTTGTCATTGGCAAAATGACTGCTGACAATGATAAGGAAGACATAGAGGCAGAAGATGATGATGCTGACAATGCTGAGGAATCCGAGGCTGAAGAATTCGAGCAGGAAACTGGTTAATATGCATCTTTATTTCCTTTCCTGTCTTTACTCTTCAGAATCCTCAATTTACTAGTTTTTTTCTGTTTGTTAACTACCTTATAGCTTCAAATTTATGTGCCTCTTGAGCCGATGTTTCTTTCTTACTTTGTGTTAAAAGTTATTGTTATTGTATTTTCCACTCCATTTGCTTTTAACCAATTGAAAATCTTCC

Coding sequence (CDS)

ATGAGTCACCCCCTAGTGAGGTTCGGAGGAACTGTCTCCCATTCTCTTTCGAAAAATAAGGCGGCTCATCTCGCTCAACTGCTTACTGCTCGAGAGCGCAAGAGTGCTCCTTGCTCGAATTCACAGGCTAGGGCTCATCTACTACGATATTACAGAATCAGTGGTCTTCAAGCCTACTGTGTACGATTAACCAGTCTTGCGGCAGCAAAAGGATTAGATGTCCCCCATGCTACGGTTCCTTGCGTGGGAATTGGGGTTAAAACAGAGCAGGGTCAAACCTCGACCGCAATAGGAACAGAAATAAACCAGTTGCCAAACACCAGACATTTTCGAATTCCGCAACGGAGCGAGCTCATTCGTCTCTCTCTCTCTCTCCAGTTTCCAGCTCCGGCGACAAAAATGCTGCAGTTTCCGGCTTTCATGACACAGTACCCTTGGTCTACAAGGACAATTCCCACGTCGTTTTTACTGCCGTCTCAGTGGCCACAACCCCAAAACGAAGAGCTACTGCTCGCCATGGAAGAGTCTGATTTTGAAGAAAAGTGCAATGAAATTAGGAAGACAAACAGCAACCTGGTTGTCATTGGCAAAATGACTGCTGACAATGATAAGGAAGACATAGAGGCAGAAGATGATGATGCTGACAATGCTGAGGAATCCGAGGCTGAAGAATTCGAGCAGGAAACTGGTTAA

Protein sequence

MSHPLVRFGGTVSHSLSKNKAAHLAQLLTARERKSAPCSNSQARAHLLRYYRISGLQAYCVRLTSLAAAKGLDVPHATVPCVGIGVKTEQGQTSTAIGTEINQLPNTRHFRIPQRSELIRLSLSLQFPAPATKMLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Homology
[Close]
BLAST of ClCG01G013460 vs. NCBI nr
Match: XP_008438807.1 (PREDICTED: uncharacterized protein LOC103483797 [Cucumis melo] >XP_022954520.1 uncharacterized protein LOC111456762 [Cucurbita moschata] >XP_022994682.1 uncharacterized protein LOC111490324 [Cucurbita maxima] >XP_023541351.1 uncharacterized protein LOC111801554 [Cucurbita pepo subsp. pepo] >KAA0055258.1 transcription termination factor 4 [Cucumis melo var. makuwa] >KAG6573081.1 hypothetical protein SDJN03_26968, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012267.1 hypothetical protein SDJN02_25019 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 186.0 bits (471), Expect = 3.6e-43
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 134 MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 193
           MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV
Sbjct: 1   MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 60

Query: 194 VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG 231
           VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Sbjct: 61  VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG 97

[Close]
BLAST of ClCG01G013460 vs. NCBI nr
Match: XP_038894516.1 (uncharacterized protein LOC120083062 [Benincasa hispida])

HSP 1 Score: 181.4 bits (459), Expect = 8.8e-42
Identity = 95/97 (97.94%), Postives = 95/97 (97.94%), Query Frame = 0 

Query: 134 MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 193
           MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSN V
Sbjct: 1   MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNQV 60

Query: 194 VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG 231
           VIGKM ADNDKEDIEAEDDDADNAEESEAEEFEQETG
Sbjct: 61  VIGKMIADNDKEDIEAEDDDADNAEESEAEEFEQETG 97

[Close]
BLAST of ClCG01G013460 vs. NCBI nr
Match: XP_004152491.1 (uncharacterized protein LOC101206898 [Cucumis sativus] >KGN64341.1 hypothetical protein Csa_014279 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 8.8e-42
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0 

Query: 134 MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 193
           MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLV
Sbjct: 1   MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLV 60

Query: 194 VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG 231
           VIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Sbjct: 61  VIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG 97

[Close]
BLAST of ClCG01G013460 vs. NCBI nr
Match: XP_022137094.1 (uncharacterized protein LOC111008654 [Momordica charantia])

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-41
Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0 

Query: 134 MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 193
           MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV
Sbjct: 1   MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 60

Query: 194 VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQET 230
           VIGKM+ADNDKEDIEAEDDDADN EESEAEEFEQET
Sbjct: 61  VIGKMSADNDKEDIEAEDDDADNGEESEAEEFEQET 96

[Close]
BLAST of ClCG01G013460 vs. NCBI nr
Match: XP_018813880.1 (uncharacterized protein LOC108985877 [Juglans regia] >KAF5476731.1 hypothetical protein F2P56_003439 [Juglans regia])

HSP 1 Score: 165.2 bits (417), Expect = 6.5e-37
Identity = 88/98 (89.80%), Postives = 91/98 (92.86%), Query Frame = 0 

Query: 134 MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 193
           MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQP +EELLLAMEESDFEEKCNEIRKTNSNLV
Sbjct: 1   MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPHSEELLLAMEESDFEEKCNEIRKTNSNLV 60

Query: 194 VIGKMTADNDKEDI--EAEDDDADNAEESEAEEFEQET 230
           VIGK T DNDKED   +A+DDDADNAEESE EEFEQET
Sbjct: 61  VIGKTTVDNDKEDYDNDADDDDADNAEESEGEEFEQET 98

[Close]
BLAST of ClCG01G013460 vs. ExPASy TrEMBL
Match: A0A6J1JWJ6 (uncharacterized protein LOC111490324 OS=Cucurbita maxima OX=3661 GN=LOC111490324 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 134 MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 193
           MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV
Sbjct: 1   MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 60

Query: 194 VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG 231
           VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Sbjct: 61  VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG 97

[Close]
BLAST of ClCG01G013460 vs. ExPASy TrEMBL
Match: A0A5A7UJS1 (Transcription termination factor 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G001000 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 134 MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 193
           MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV
Sbjct: 1   MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 60

Query: 194 VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG 231
           VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Sbjct: 61  VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG 97

[Close]
BLAST of ClCG01G013460 vs. ExPASy TrEMBL
Match: A0A6J1GSM6 (uncharacterized protein LOC111456762 OS=Cucurbita moschata OX=3662 GN=LOC111456762 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 134 MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 193
           MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV
Sbjct: 1   MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 60

Query: 194 VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG 231
           VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Sbjct: 61  VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG 97

[Close]
BLAST of ClCG01G013460 vs. ExPASy TrEMBL
Match: A0A1S3AXA5 (uncharacterized protein LOC103483797 OS=Cucumis melo OX=3656 GN=LOC103483797 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 134 MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 193
           MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV
Sbjct: 1   MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 60

Query: 194 VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG 231
           VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Sbjct: 61  VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG 97

[Close]
BLAST of ClCG01G013460 vs. ExPASy TrEMBL
Match: A0A0A0LWF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046850 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 4.2e-42
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0 

Query: 134 MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 193
           MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLV
Sbjct: 1   MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLV 60

Query: 194 VIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG 231
           VIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Sbjct: 61  VIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG 97

[Close]
BLAST of ClCG01G013460 vs. TAIR 10
Match: AT5G63135.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 132.1 bits (331), Expect = 5.7e-31
Identity = 72/99 (72.73%), Postives = 83/99 (83.84%), Query Frame = 0 

Query: 134 MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNLV 193
           MLQFP  MTQ+P ST+TIP S+LLP QWPQPQNEE+LLAMEE++FEEKCNEIRK +  L 
Sbjct: 1   MLQFPTLMTQFPSSTKTIPASYLLPLQWPQPQNEEILLAMEEAEFEEKCNEIRKMSPALP 60

Query: 194 VIGKMTADNDKE--DIEAEDDDADNAEESEAEEFEQETG 231
           VIGK   +N++E  D EAEDDDADNAEES+ EEFEQETG
Sbjct: 61  VIGKPVVNNEQEEDDNEAEDDDADNAEESDGEEFEQETG 99

The following BLAST results are available for this feature:
BLAST of ClCG01G013460 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008438807.13.6e-43100.00PREDICTED: uncharacterized protein LOC103483797 [Cucumis melo] >XP_022954520.1 u... [more]
XP_038894516.18.8e-4297.94uncharacterized protein LOC120083062 [Benincasa hispida][more]
XP_004152491.18.8e-4296.91uncharacterized protein LOC101206898 [Cucumis sativus] >KGN64341.1 hypothetical ... [more]
XP_022137094.11.5e-4197.92uncharacterized protein LOC111008654 [Momordica charantia][more]
XP_018813880.16.5e-3789.80uncharacterized protein LOC108985877 [Juglans regia] >KAF5476731.1 hypothetical ... [more]
BLAST of ClCG01G013460 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG01G013460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JWJ61.7e-43100.00uncharacterized protein LOC111490324 OS=Cucurbita maxima OX=3661 GN=LOC111490324... [more]
A0A5A7UJS11.7e-43100.00Transcription termination factor 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A6J1GSM61.7e-43100.00uncharacterized protein LOC111456762 OS=Cucurbita moschata OX=3662 GN=LOC1114567... [more]
A0A1S3AXA51.7e-43100.00uncharacterized protein LOC103483797 OS=Cucumis melo OX=3656 GN=LOC103483797 PE=... [more]
A0A0A0LWF04.2e-4296.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046850 PE=3 SV=1[more]
BLAST of ClCG01G013460 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G63135.15.7e-3172.73unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 200..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..230
NoneNo IPR availablePANTHERPTHR37771:SF2OS02G0593400 PROTEINcoord: 134..230
NoneNo IPR availablePANTHERPTHR37771OS02G0593400 PROTEINcoord: 134..230
IPR026182Anaphase-promoting complex subunit 15PFAMPF15243ANAPC15coord: 142..228
e-value: 1.7E-17
score: 63.6

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G013460.1ClCG01G013460.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint
cellular_component GO:0005680 anaphase-promoting complex