ClCG01G011580 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCGAAAATCGACTTCCAAATTCTATGTTTCTCTTGGGGGTAACCTCAATACGTAGGGATTGAAGAAGCAGTCCATTATTTCTAGATCAAGCATAGAAGTTGAATATCGTTTTCTTGCTTTGGTTGCAACTGAAATGGTAAGGATTTGTGTAAGCCCCGCATCTATTTTTATGAGAACGCAAAGTAAGAAGGGGCCGAGAGATGGGTGAATGTGTAAAAGTAGTTGGCTGGCTTGCGTTTGGAGTGGGAAAATGGCTAAGTGTAAGCTATGCGTTGATGACAACCTGTTGTGGAGGAAATAATTTTGGTGTAAACGCAAAGGTGAGGGAAGCTTATCATGCGTTGAAGTCGTGATGTGTTGAGGATAATAAGGCGTGGAGGATCACTTGGTACCGAGGATCATTATGCGTTAAACGCATTGAAGGCAGTGTGTCGGTGGAAGTAAAGGCCACGAGGGGTTTGGGAGCTGTTATGCGGTGAGTCCATTATGCGGTGAATGCTACCATGCGTCGAAGGCGAGTGTGTGTTGGACAAGGAGTGTTGGCTGAGAGAAGGTAATGCGTATGTTAATTATTTGGCGGGAGAGTTTGAAATGAATTATCATCAGAGGCCGTGTGCGTTGCTGAAGCTGAGCATAGGAGTATGCGTCGAACGGATTATAATATAGAGTTGGAATGGGGAACAAGTCGGTGATATATATATATATATATATGTGGACTGAGAATTCAATTGTTCTGCTTGCATTTCAGAGCTCGAGTTGGGTCCATATTAAGGCGAAACTCCGAAGAGAGGTAGAAGAAGATGTTCATGCTGATCTGAAGCAGAAATTTCATTGAATTCGTGGAAGAAACTCGGGTTTGACAGAGGTTTCGGCTGCTATGATCTCTTCAGAGTGATGCTCGGTTTTGGAGGAAGAACAAATTGAAGAGACGAAGGTTAGGGCTGAAACTTTGAGGTTAGTAAGTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCTGAGCATAGGAGGTATGCGTCGAACGGATTATAATATAGAGTTGGAATGGGGAACAAGTCGGTGATATATATATATATATATATGTGGACTGAGAATTCAATTGTTCTGCTTGCATTTCAGAGCTCGAGTTGGGTCCATATTAAGGCGAAACTCCGAAGAGAGGTAGAAGAAGATGTTCATGCTGATCTGAAGCAGAAATTTCATTGAATTCGTGGAAGAAACTCGGGTTTGACAGAGGTTTCGGCTGCTATGATCTCTTCAGAGTGATGCTCGGTTTTGGAGGAAGAACAAATTGAAGAGACGAAGGTTAGGGCTGAAACTTTGAGGTTAGTAAGTTAACTCGAATTCTAGCAGAATTCATGAAGGATGTTTGAGCTGAAATTGTCTAATTGTGTGTCAAACTCAGGAAGAAGAGACGGAAGTTGAACTGTCGGATGATTAGAGGCAACTTGGAGTTGTCGAAGGTTATGTCCTAAACGGTGAGGAGGTTCTTCATGAAATTTGGAGGTGAGATGTAGGACCTGTATTTTAACAAGTTTATAGAAGGAAGAAAGTACTGGAATTTGTTGAAACGAAATGTTTAACATGTTGAAAAAGGAAGAAGAAAGGAAGAAGGAAACGGTTCTGTCACAGCTTGAGTATCGCTGAGTGATGAGAGATTGAGCAGCAGAGGAAGTAACGCTGCGACGCAAAGATAGGCTTGCGTCTCACAATTCTCGCTAGAGTATCGCTGGGTACCGCTCCTCAAGGTAGTTTCGCTGGTTTTAAACAACGCAGTGTCGCTAGTACAGTTTGAATATCTTTTGAGTAACGCTGGTAGCTTATTAATTCCCATAGAGTAACGATGCTACTGTATGTTAAAGAAAAGGGGAGTTTATGAAAACTAAACTTGAGGATTGTGTATTTTCAGGCCAAGAAGAGCTCGGGGAGGCTTATAACCCATTTAGAGCCGGGACCGATTGTGAGTGACTGTTTGTTATATCTTGTGTTAAACTTAGTACGCATAGTGATGAGGAAACGTAATGCATGGTAGTTTGCTTTATGTATGTGATGTGTTAGTGATTTAAAAGAATACTATTACAAATGTCTAAGCATATAAGTGGCTGAGGGACCTTATGGTGAAAGCTACTTGTGAGTAAGCGTGATATTAAGTGCCGAGGGATTTGAGAAGGCACTTGAATAACAGTAGAGAATGGACTACAATGCTCAGGGACTGTAAGTGAAGGCATGTAGTATCCTATCACAACTAGCTCGTGCCGAGGGATTCTGTGTGAAGGCACTTGAGCGTAGATAGAGTTTGTTACCTGTGCTGAGGAATTTCATGTGAAGGCACATGGTGTTGTAGTTAAACATGAACAAGTGCTGAGGGACGGGAAGTGAAGGCACTAAATAGATAGGAAACTTGTGAAACATGAGAATTGATAGATATACATGCGATGGTTACTACCTTACAAACTGAATTAAACTAATATGATTTGTCTTAGTAGATTTAGTCACTCACTGAGCCTTTTGCTCATCCAGTTTGTTGTTGTTTGCCGTTTCAGGTAGCGAGCGTGTCCGGGACGCCTAGCCTACTGAAGAATCTCGTCTGGGCCTGTCTAGAAGCGAACCTCTGGGATAGTTGTAAATACTTAGCTTGTTCGTATATCTTGTAATGAACATATTTTATGAGGGTAGAGAGGGGGACGTGTTGTACTTATTATGTGAATATACAAACATGTTGATTGAAGTTTGCACGTTTTTCTATGATGAGATTATGAAAAGTTGATTGTCTTGCTATTCTTTTATGGTGTTTATCTTATAGAGTCTTATGTTGGGAAATAGGATCATGCTCTTTCCTAGGTATAGAGTAAATCTGGGTTGGGGTGTGACAATTTGTTCTTTACTTAATGATCTAAGAATCTCTTTTGCTAATATTCCTGTTTTATGGTGTAATAATCTCAGTGTTGTTCATCGTAGTGCTAATCCTATCTTATATTCCAAAACTAAGTATGTTGAGCTTGACATTTATTATGTTCGAGATCTTGTGTTTAAGAAGCATGTCAATATTCGTCATCTCCCTACCTCAGAACAAATTGCTAATGTGTTTATAAAACCTCTATCCACTTCAAGTTTTTTGAAGCTAAAGAGTAAATTGAATGTTGTTGTAGCAGCCAATATAGGTTTGCCCGGGGGGGATTGAATTTATTATCATTGTAAAGGCCCAAGGCCTAGTTTCCTCTTCTAGGAGGCCTTCAATTCGGTTACTATCGCGATGTAATCCAGTATGTGTGAGTATAGTGAGCTGTTTTGTAAGAGTTTCTTTTCAAGCTTTGTTATTTATATGACATTTCATCTTCCATTAATAAATAACAAAACATAGTGTTTTCTCTCGCATGGCTATGGCTCCAAATTATCTCATAATTATTTTTTTAAAAAAATTATTTTAAGTTTGGTAATTGTGAAAAGTAGAGAAAGATAAAATTAAATGATAAATGTAAAAAGTAAATATAGAGGGAAATAAGTGAAAAAAAAATGGAAAAAAAAATTACCACAAAAATGTGCAAAATTTAACGATAACTACCACCACTTTTGCAATTTGCTCTATTTACTACCAAATAAAAAGTAAAAATTAGAATTAGAAACATAAAAAACCAATCTTAGATTAAGCTGGTCATTCTCATAGTTGTGTGTGTTCCCCTCACAGATATCTCGTGCCATGGCTAACTCCTCCATCGGCGGCTGGCCGACGCATCCTCAACCCCAAACCCATCCCCATCGCCACAACTCCTCGCCGTGCCTCCGAGCCTTCGCCGCCGGCATGGTTCTCCTCCTTTCCATCGCTCTCATCATCTACACCGTCCAATATTTCATCTTCCGCCCCATCCTCCCTATTCTCCGGGTCGACACACTTCAACTCGCCAAATTTCTCTGCCGCCGCCCCGTCCCTTATCTCCTCATGGGTCGTTGGATTTTCCGTCAACAACCCCAACAAGAAGCTCGCCATCTCATTCCAAAACCTTGAGTCCTCCATTTACTACAAAGATAACATTATCGCTCAAGCCCGAATTCACCGCTTCCTCCTCCACCGAAGGAACTCGACGGCCGTTGTCACTCCCTTCATCACCGACTCGCCCGTCGATGAGTCGGTTTTGAACGACATTAAAGGAGACTTAGCGTGTGGAGCAATTAATTTCAATGTTGTAGTTCTTGGCTATGCCGAGTTCCAAATCGGTGTGTGGCGGTGGAGGGGCAACAATTTTCGGGTTCTTTGCAGCGATTTGTCTGTCGGATTGTTGTCGCCGCTGAGTCCCGGCGGCGGGTCCGGCCAGTTGGTTGGTGGCTCAAGGCAATGCCAGCTACGATGA ATGATCGAAAATCGACTTCCAAATTCTATATATCTCGTGCCATGGCTAACTCCTCCATCGGCGGCTGGCCGACGCATCCTCAACCCCAAACCCATCCCCATCGCCACAACTCCTCGCCGTGCCTCCGAGCCTTCGCCGCCGGCATGGTTCTCCTCCTTTCCATCGCTCTCATCATCTACACCGTCCAATATTTCATCTTCCGCCCCATCCTCCCTATTCTCCGGGTCGACACACTTCAACTCGCCAAATTTCTCTGCCGCCGCCCCGTCCCTTATCTCCTCATGGGTCGTTGGATTTTCCGTCAACAACCCCAACAAGAAGCTCGCCATCTCATTCCAAAACCTTGAGTCCTCCATTTACTACAAAGATAACATTATCGCTCAAGCCCGAATTCACCGCTTCCTCCTCCACCGAAGGAACTCGACGGCCGTTGTCACTCCCTTCATCACCGACTCGCCCGTCGATGAGTCGGTTTTGAACGACATTAAAGGAGACTTAGCGTGTGGAGCAATTAATTTCAATGTTGTAGTTCTTGGCTATGCCGAGTTCCAAATCGGTGTGTGGCGGTGGAGGGGCAACAATTTTCGGGTTCTTTGCAGCGATTTGTCTGTCGGATTGTTGTCGCCGCTGAGTCCCGGCGGCGGGTCCGGCCAGTTGGTTGGTGGCTCAAGGCAATGCCAGCTACGATGA ATGATCGAAAATCGACTTCCAAATTCTATATATCTCGTGCCATGGCTAACTCCTCCATCGGCGGCTGGCCGACGCATCCTCAACCCCAAACCCATCCCCATCGCCACAACTCCTCGCCGTGCCTCCGAGCCTTCGCCGCCGGCATGGTTCTCCTCCTTTCCATCGCTCTCATCATCTACACCGTCCAATATTTCATCTTCCGCCCCATCCTCCCTATTCTCCGGGTCGACACACTTCAACTCGCCAAATTTCTCTGCCGCCGCCCCGTCCCTTATCTCCTCATGGGTCGTTGGATTTTCCGTCAACAACCCCAACAAGAAGCTCGCCATCTCATTCCAAAACCTTGAGTCCTCCATTTACTACAAAGATAACATTATCGCTCAAGCCCGAATTCACCGCTTCCTCCTCCACCGAAGGAACTCGACGGCCGTTGTCACTCCCTTCATCACCGACTCGCCCGTCGATGAGTCGGTTTTGAACGACATTAAAGGAGACTTAGCGTGTGGAGCAATTAATTTCAATGTTGTAGTTCTTGGCTATGCCGAGTTCCAAATCGGTGTGTGGCGGTGGAGGGGCAACAATTTTCGGGTTCTTTGCAGCGATTTGTCTGTCGGATTGTTGTCGCCGCTGAGTCCCGGCGGCGGGTCCGGCCAGTTGGTTGGTGGCTCAAGGCAATGCCAGCTACGATGA MIENRLPNSIYLVPWLTPPSAAGRRILNPKPIPIATTPRRASEPSPPAWFSSFPSLSSSTPSNISSSAPSSLFSGSTHFNSPNFSAAAPSLISSWVVGFSVNNPNKKLAISFQNLESSIYYKDNIIAQARIHRFLLHRRNSTAVVTPFITDSPVDESVLNDIKGDLACGAINFNVVVLGYAEFQIGVWRWRGNNFRVLCSDLSVGLLSPLSPGGGSGQLVGGSRQCQLR Homology
BLAST of ClCG01G011580 vs. NCBI nr
Match: XP_008463664.1 (PREDICTED: uncharacterized protein LOC103501757 [Cucumis melo] >KAA0035579.1 protein YLS9 isoform X2 [Cucumis melo var. makuwa] >TYK30956.1 protein YLS9 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 212.2 bits (539), Expect = 4.6e-51 Identity = 108/147 (73.47%), Postives = 120/147 (81.63%), Query Frame = 0
BLAST of ClCG01G011580 vs. NCBI nr
Match: XP_018857049.1 (uncharacterized protein At1g08160-like [Juglans regia] >KAF5447433.1 hypothetical protein F2P56_032987 [Juglans regia]) HSP 1 Score: 131.7 bits (330), Expect = 7.9e-27 Identity = 70/147 (47.62%), Postives = 96/147 (65.31%), Query Frame = 0
BLAST of ClCG01G011580 vs. NCBI nr
Match: XP_040991250.1 (uncharacterized protein At1g08160-like [Juglans microcarpa x Juglans regia]) HSP 1 Score: 127.1 bits (318), Expect = 2.0e-25 Identity = 68/147 (46.26%), Postives = 95/147 (64.63%), Query Frame = 0
BLAST of ClCG01G011580 vs. NCBI nr
Match: XP_042956465.1 (uncharacterized protein At1g08160 [Carya illinoinensis] >KAG6632036.1 hypothetical protein CIPAW_13G131000 [Carya illinoinensis] >KAG6682257.1 hypothetical protein I3842_13G129700 [Carya illinoinensis] >KAG7950481.1 hypothetical protein I3843_13G114700 [Carya illinoinensis]) HSP 1 Score: 126.7 bits (317), Expect = 2.5e-25 Identity = 67/147 (45.58%), Postives = 94/147 (63.95%), Query Frame = 0
BLAST of ClCG01G011580 vs. NCBI nr
Match: KAG2674349.1 (hypothetical protein I3760_13G129800 [Carya illinoinensis]) HSP 1 Score: 126.3 bits (316), Expect = 3.3e-25 Identity = 66/147 (44.90%), Postives = 94/147 (63.95%), Query Frame = 0
BLAST of ClCG01G011580 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 4.4e-04 Identity = 30/123 (24.39%), Postives = 53/123 (43.09%), Query Frame = 0
BLAST of ClCG01G011580 vs. ExPASy TrEMBL
Match: A0A5D3E5N0 (Protein YLS9 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001820 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 2.2e-51 Identity = 108/147 (73.47%), Postives = 120/147 (81.63%), Query Frame = 0
BLAST of ClCG01G011580 vs. ExPASy TrEMBL
Match: A0A1S3CJS5 (uncharacterized protein LOC103501757 OS=Cucumis melo OX=3656 GN=LOC103501757 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 2.2e-51 Identity = 108/147 (73.47%), Postives = 120/147 (81.63%), Query Frame = 0
BLAST of ClCG01G011580 vs. ExPASy TrEMBL
Match: A0A0A0LT76 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169920 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 1.4e-45 Identity = 103/146 (70.55%), Postives = 112/146 (76.71%), Query Frame = 0
BLAST of ClCG01G011580 vs. ExPASy TrEMBL
Match: A0A2I4HLK5 (uncharacterized protein At1g08160-like OS=Juglans regia OX=51240 GN=LOC109019244 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 3.8e-27 Identity = 70/147 (47.62%), Postives = 96/147 (65.31%), Query Frame = 0
BLAST of ClCG01G011580 vs. ExPASy TrEMBL
Match: A0A6J1K154 (NDR1/HIN1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111490764 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.2e-23 Identity = 65/151 (43.05%), Postives = 96/151 (63.58%), Query Frame = 0
BLAST of ClCG01G011580 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 47.0 bits (110), Expect = 2.4e-05 Identity = 26/116 (22.41%), Postives = 55/116 (47.41%), Query Frame = 0
BLAST of ClCG01G011580 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 ) HSP 1 Score: 46.6 bits (109), Expect = 3.1e-05 Identity = 30/123 (24.39%), Postives = 53/123 (43.09%), Query Frame = 0
BLAST of ClCG01G011580 vs. TAIR 10
Match: AT4G26820.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 42.0 bits (97), Expect = 7.7e-04 Identity = 30/134 (22.39%), Postives = 58/134 (43.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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